mRNA_E-fasciculatus_F_contig1333.2503.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: D7G2M9_ECTSI (Indole-3-glycerol-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M9_ECTSI) HSP 1 Score: 489 bits (1260), Expect = 3.070e-162 Identity = 264/283 (93.29%), Postives = 268/283 (94.70%), Query Frame = 3
Query: 138 MRRCCGTAAALVLATSVVEHAGGLLST----TSSALSRNTSFLPRSTYAARGRRSTRRRGLGQPGGGRERGSSSTATTTMGIAYNPNDELRAIVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADVKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKLGKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE 974
MRRCCGTA A +LAT V EHAGGLLST +SSALSR+ SF PRSTYAA GRRSTRRRGLGQ G GRER SSSTATTTMGIAYNPNDELRAIVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVAD+KRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLD VVAHFKKLGKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE
Sbjct: 1 MRRCCGTAVAFLLATCV-EHAGGLLSTPSTASSSALSRHASFPPRSTYAASGRRSTRRRGLGQAGSGRERASSSTATTTMGIAYNPNDELRAIVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADMKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDKVVAHFKKLGKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE 282
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: A0A7S2BZD9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZD9_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.600e-35 Identity = 91/217 (41.94%), Postives = 130/217 (59.91%), Query Frame = 3
Query: 354 TTTMGIAYNPNDELRAIVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNK-GQEQDHQAVVVADVKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKLGKTP---------PPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE 974
T + ++ ND + ++ RK++E + L H+A +D +++RL Y A +S + + ALR+ K G E+ V+AD+KR SPTS LP V+ F+D +L G + MVNTD WGGS+ DL SVV+ K + K P +V KD+I+ P+Q+A ALE GA G VL+A V+G AL + M+AAT MGTE IVEVHTP E A++
Sbjct: 36 TACVSMSSTTNDLILEVIHRKKYEVQQLEQKHSAPNDPVKLRLGYVAEQSSFRVTRALRKYKLGDERP--MTVLADLKRTSPTSRALPRTVSGFNDAGRRTEELMNFGVTATMVNTDELGWGGSMDDLSSVVSKVKAMEKLPGKTGEMANMTAVVMKDLIIDPIQIAVALESGAHGVVLLANVVGQALEELMEAATCMGTEAIVEVHTPNEARNAVD 250
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: A0A7S2RG86_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG86_9STRA) HSP 1 Score: 132 bits (333), Expect = 7.960e-30 Identity = 87/203 (42.86%), Postives = 120/203 (59.11%), Query Frame = 3
Query: 384 NDELRA-IVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADVKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKLGKTPPP-----IVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE 974
N+EL +++RK++E + L H D + +R + + S Y L ALR ++ + + V+ D+KR SPTS LP V+ F D A + G +VL VNTD WGG L DL+SVV K K P +V KD+I+HP+Q+A+ALE+GA G +L A +LG L +DAAT+MGTE IVEVHTP E + ALE
Sbjct: 70 NEELMLQLLERKKYEVRQLEKIHKDMADPVNLRQGFISDTSSYTLTRALRLSRLGD-TRKISVMGDLKRLSPTSKNLPRTVSGFVDAGRRARECLELGVNVLSVNTDQAGWGGKLDDLNSVVQARKDYAKNIDPSNHTAVVMKDLIIHPIQIAEALERGANGVILQAGLLGAQLGPLLDAATIMGTEAIVEVHTPNECDYALE 271
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: A0A7S0SWD0_9STRA (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWD0_9STRA) HSP 1 Score: 129 bits (324), Expect = 8.250e-30 Identity = 79/201 (39.30%), Postives = 121/201 (60.20%), Query Frame = 3
Query: 378 NPNDELRAIVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADVKRRSPTSAELPPDVNAFD--DPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKLGKTPPPI-VAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKAL 971
+P L+ +V RK+ E +LL H DD L MR+SY ASE+ + + ++L+R+ H ++ D+KR+SPT +P + N D + ++ L AG ++NTD +GG LSD+ K + PP+ + KD+I+HP+Q+AQAL+ GA+G ++I V+G L +DA T+MGTE +VEVHTP E+E AL
Sbjct: 2 SPGAYLQRMVDRKKIEVDNLLRRHQEPDDPLVMRMSYMASENKFNVTNSLKRDATINNQHTISILIDLKRKSPT---IPNNRNIIDFSSTSKFSELLTVAGVDGFLINTDELEYGGRLSDIKESSKAVKAIRPNKPPVCICKDIIIHPVQIAQALQAGASGILIIMAVVGSDLEVLLDACTIMGTEAVVEVHTPNELEYAL 199
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: W7TXI0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXI0_9STRA) HSP 1 Score: 130 bits (326), Expect = 6.430e-29 Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 3
Query: 405 VQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADVKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKL-GKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE 974
VQRK +E + L T RL RL Y + AL+R+ G EQ H V+A++KRR+PT P ++ A D A QL GA VLMV TD +GGS+ DL S F + + PPIVAKD+ +HP+Q++QA+E GA G +L+A ++G +L +DA T +G E +VEVHT AE+EKALE
Sbjct: 77 VQRKNYEVQQL--RETEEGSRLLARLRSVNLVGGYRVARALKRSTG-EQVHVMSVIAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALE 264
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: A0A4D9D3H2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3H2_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.500e-27 Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 3
Query: 405 VQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADVKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKL-GKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE 974
VQRK +E + L T RL RL Y + AL+R+ G EQ H V+A++KRR+PT P ++ A D A QL GA VLMV TD +GGS+ DL S F + + PPIVAKD+ +HP+Q++QA+E GA G +L+A ++G +L +DA T +G E +VEVHT AE+EKALE
Sbjct: 30 VQRKNYEVQQL--RETEEGSRLLARLRSVNLVGGYRVARALKRSTG-EQVHMMSVIAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALE 217
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: A0A1Z5KM99_FISSO (Indole-3-glycerol-phosphate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM99_FISSO) HSP 1 Score: 120 bits (300), Expect = 1.710e-25 Identity = 86/224 (38.39%), Postives = 127/224 (56.70%), Query Frame = 3
Query: 342 SSTATTTMGIAYNPN-DELRAIVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALR--SALRR---------NKGQEQDHQAVVVADVKRRSPTSAELPPDVNA-FDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKLGKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE 974
S + T + I Y +++ A + RK++E K + A HT++ D ++M +SY A E+ +R ALRR + G +A + D+KR+S P +V FDD A + GA ++VNTD A+GG +++L S V +K+ KT ++ KD++V +Q+ A E GA G +L +CVLGPAL F+D AT MG E IVE HT AEVE+ALE
Sbjct: 30 SHSKTASSAIRYGLEAEDIYAAIHRKEYEMKKVNAQHTSTTDPVRMAMSY-AQETASPMRLARALRRVHEDVDEKESPGLAGMRRASFIVDIKRKS---LSRPGEVFCNFDDAGMVAEAMVRLGADAVIVNTDFAAYGGDITELKSAVKAVRKVSKTAA-VIMKDIVVDEIQLGMAKEAGADGIILQSCVLGPALDSFLDLATFMGLETIVECHTRAEVERALE 248
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: A0A0G4HST7_9ALVE (Indole-3-glycerol-phosphate synthase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HST7_9ALVE) HSP 1 Score: 116 bits (290), Expect = 1.730e-25 Identity = 73/198 (36.87%), Postives = 112/198 (56.57%), Query Frame = 3
Query: 381 PNDELRAIVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADVKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKLG--KTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKA 968
P E + ++RK++E + ++ AH D + MRL+Y S+ + +LR+ QE + +V D+KR++P+ + +V +F DP A ++ G + VN DGP++GGS DLD V KK P I+AKD+ +HP+Q+A A E GA G +L A VLG L M+A +MG E +VE H+ +VE A
Sbjct: 23 PWQEYQRALERKKYEVQRMMEAHQDKYDPVVMRLNYYQSDPNPKVILSLRKAIDQEDPQRLALVGDLKRKTPSGSPTDREVLSFVDPGDVALKMAELGFDAVFVNCDGPSYGGSYRDLDIVSKRLKKAFDFNQRPAIIAKDIFIHPVQVAMAAEMGADGVILNAGVLGQDLSGMMEACGVMGLEAVVECHSYMDVEMA 220
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: A0A7S1TYS9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYS9_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.220e-25 Identity = 79/190 (41.58%), Postives = 109/190 (57.37%), Query Frame = 3
Query: 405 VQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADVKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKLGKTP-PPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKAL 971
VQRK++E + L H + D +++R+ Y + S +RR Q + + V D+KR SPT P V F D A+ L AG ++VNTD ++GG ++DL + VA K L + P IV KD+I+ P+Q+A A E GA L+ACV GP L D MDAAT+MG E IVEVHTP E + A+
Sbjct: 60 VQRKRYEVQQLYREHDDATDPIRLRMGYMSQNFTLQATSRIRR---QGDELRLSVCYDLKRFSPTGVR-PAQVVGFADAGQMAATLADAGVDAILVNTDFNSYGGDVADLKAAVAATKDLPEERRPAIVMKDIIIDPIQVAVAAEAGADAVYLMACVAGPVLEDLMDAATVMGIEAIVEVHTPNEAKYAM 245
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Match: Q4UDX1_THEAN (Indole-3-glycerol-phosphate synthase n=2 Tax=Theileria annulata TaxID=5874 RepID=Q4UDX1_THEAN) HSP 1 Score: 120 bits (301), Expect = 1.800e-24 Identity = 76/202 (37.62%), Postives = 114/202 (56.44%), Query Frame = 3
Query: 375 YNPNDELRAIVQRKQHETKSLLAAHTASDDRLQMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADVKRRSPT-SAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDSVVAHFKKLGKTP-PPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALE 974
Y P + ++ K E L+ H +D+LQ+RL+Y S L L RN H+ V+AD+KRR+PT + +V ++ D A + + G V+ VN D +GG ++DL+ V + +KLG+T P IV KD+I+HP+Q+AQA+E A G +L A +LG AL D + + MG E IVEVHT A+ ++ E
Sbjct: 94 YYPEERFYKMITDKYSEVDQLIEQHKDQNDKLQLRLNYLQCTSNLKLSDMLSRNSNNTH-HKLCVIADMKRRTPTHNPRCDNNVLSYTDAGEVALNMASVGFDVIFVNVDQKNYGGHINDLNKVFLNLRKLGRTQRPAIVMKDIILHPIQIAQAVEMRADGVILNAAILGNALKDLLTSCITMGIEAIVEVHTTADALRSAE 294 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1333.2503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1333.2503.1 >prot_E-fasciculatus_F_contig1333.2503.1 ID=prot_E-fasciculatus_F_contig1333.2503.1|Name=mRNA_E-fasciculatus_F_contig1333.2503.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=361bp MRRCCGTAAALVLATSVVEHAGGLLSTTSSALSRNTSFLPRSTYAARGRRback to top mRNA from alignment at E-fasciculatus_F_contig1333:6676..13731+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1333.2503.1 ID=mRNA_E-fasciculatus_F_contig1333.2503.1|Name=mRNA_E-fasciculatus_F_contig1333.2503.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7056bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1333:6676..13731+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1333:6676..13731+ >mRNA_E-fasciculatus_F_contig1333.2503.1 ID=mRNA_E-fasciculatus_F_contig1333.2503.1|Name=mRNA_E-fasciculatus_F_contig1333.2503.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2166bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1333:6676..13731+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |