mRNA_E-fasciculatus_F_contig13325.2501.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13325.2501.1
Unique NamemRNA_E-fasciculatus_F_contig13325.2501.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: D8LNE4_ECTSI (PITH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE4_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 3.180e-119
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 3
Query:    3 AGAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
            AGAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE
Sbjct:    6 AGAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 182          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A835Z9A2_9STRA (PITH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A2_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.410e-75
Identity = 117/176 (66.48%), Postives = 142/176 (80.68%), Query Frame = 3
Query:    6 GAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
            G  A  AAA  A++ EVRD+ DL+ KA+C+CLN+   ATW NLF GDDRL+L SDADEQLLLH+GF ETVKLHSI+F A +DD+AP TVKL++NR+SMGFSD +D+   QTLELT EDL   SA++LKFVKFQRVS +SIFV +NNGAE + LSS++FFG PVATTKM +FKK EE
Sbjct:    7 GVPANAAAAAPAAEFEVRDLNDLISKAECFCLNEKPSATWRNLFMGDDRLLLTSDADEQLLLHIGFNETVKLHSINFQALNDDSAPATVKLFINRDSMGFSDCEDIEATQTLELTAEDLKPDSATLLKFVKFQRVSSISIFVEENNGAESTSLSSIKFFGAPVATTKMSEFKKQEE 182          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A6S9JQ99_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JQ99_HETAK)

HSP 1 Score: 197 bits (502), Expect = 1.780e-60
Identity = 105/176 (59.66%), Postives = 132/176 (75.00%), Query Frame = 3
Query:    6 GAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTA--PLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKV 527
            G AAA AAA  +   E+RDITDL+ KA CYCLN+  G   +NLF GDDRL L+S+ADEQLLLH+ F ETVK+HSI+F +P+DD    P+TVKL++NR+SMGFSD +D+ P Q LEL  EDL   +A +LKFVKFQRV+ L IF+ DNNGA+ + LSS++ FG PVA T M + KKV
Sbjct:    6 GQAAAKAAAVPSQ--EIRDITDLLNKAGCYCLNEDPGYKMQNLFMGDDRLQLRSEADEQLLLHLDFNETVKIHSINFQSPADDPEAHPVTVKLFVNRDSMGFSDANDITPVQELELGPEDLGPDAACLLKFVKFQRVNSLIIFIEDNNGADYTSLSSIKIFGVPVAGTNMSELKKV 179          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: W7TWZ4_9STRA (Thioredoxin-like protein 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWZ4_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.440e-52
Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 3
Query:   51 EVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKK 524
            E+ DITD + K +C+ LN      WENLF GDDRL L+SD DEQL+LH+ F E VK+HS++ VAP  + AP TVKLYLN+ S  F D +++ P Q LELT+ED  A   ++LKFVKFQRVS L+IFV +NNGA+ + LS LR FGTP+  T +   +K
Sbjct:   16 EIVDITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A2D4BK42_PYTIN (Thioredoxin-like protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK42_PYTIN)

HSP 1 Score: 176 bits (445), Expect = 1.140e-51
Identity = 88/174 (50.57%), Postives = 119/174 (68.39%), Query Frame = 3
Query:   18 AGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVA--GSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
            A AA PK S    RD+ D + +A CYCLN+     + NLF GDD L+L+SDADEQL+LH+ F + VKLHS+  VAP+ +TAP  +KLY NR ++GFSD  D+ P QT+EL+    +A  G    L+FVKFQRV  L+IFV +N+GAE + L++L+ FG P+A T M + KKV +
Sbjct:    4 AAAAQPKTSRAGFRDLGDAISRAGCYCLNEHPSFPFANLFMGDDTLLLKSDADEQLILHIEFQDAVKLHSLHLVAPAGETAPRVIKLYANRANLGFSDAGDVEPTQTIELSDPAELAKPGKDIELRFVKFQRVKSLTIFVEENHGAEDTALANLKLFGEPIAGTNMNELKKVAD 177          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A1V9Z8E4_9STRA (Thioredoxin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8E4_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.390e-51
Identity = 86/154 (55.84%), Postives = 114/154 (74.03%), Query Frame = 3
Query:   60 DITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFK 521
            DI++ + KA+ YCLN+     + NLF GD  L+L+S+ADEQL++HV F E VKLHSI   AP+DDTAP  +KL++NRN++GFSD  D+ P Q +EL++E L AGS   L+FVKFQRV+ L++FV +NNG + S LSSLRFFG P+A T M D K
Sbjct:    7 DISEHLDKANSYCLNEDPSHNFGNLFIGDGTLLLKSEADEQLIIHVEFKEAVKLHSIALKAPNDDTAPRVLKLFVNRNNLGFSDVVDIEPVQQIELSQEQLDAGSPIELRFVKFQRVTALTLFVEENNGGDISTLSSLRFFGEPIAGTNMNDLK 160          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: K3WS93_GLOUD (PITH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS93_GLOUD)

HSP 1 Score: 172 bits (435), Expect = 1.480e-50
Identity = 81/159 (50.94%), Postives = 112/159 (70.44%), Query Frame = 3
Query:   57 RDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
            +D+TD   +++CYCLN+     + NLF GD  L L+SDADEQL+LH+ F + VK+HSI+ +AP  +TAP  VKL+ NR S+GFSD  D+ P QT+ELT EDL       L+FVKFQRV  ++IFV +NNGAE++ +SSL+ FG  +A T M + KK+ +
Sbjct:    6 KDLTDSFSRSECYCLNENPSHPFGNLFIGDGTLQLKSDADEQLILHLEFQDAVKIHSINIMAPPGETAPRVVKLFANRTSLGFSDAGDIEPTQTIELTDEDLEPNKEIELRFVKFQRVKSVTIFVEENNGAEETVISSLKLFGERIAGTNMNELKKISD 164          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: H3GGR7_PHYRM (PITH domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GGR7_PHYRM)

HSP 1 Score: 171 bits (433), Expect = 3.820e-50
Identity = 79/158 (50.00%), Postives = 113/158 (71.52%), Query Frame = 3
Query:   60 DITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
            D+ + +   DCYCLN+     + NLF GDD L L+SDADEQL+L++ F + VK+ S++ VAPS + AP  +KLY+NR ++GFSD  D+ P QT+EL  EDL+  +   L+FVKFQRV  +++FV +NNGAE++ +SSL+FFG P+A T M + KKV +
Sbjct:   15 DLKEAISVKDCYCLNEDPNKPFRNLFMGDDTLQLKSDADEQLMLYIEFQDAVKVFSLNIVAPSGEEAPRVIKLYVNRPNLGFSDATDVEPTQTIELKDEDLLPENDVELRFVKFQRVKNITVFVEENNGAEETVISSLKFFGEPLAGTNMNELKKVSD 172          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A0P1B5D7_PLAHL (Thioredoxin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5D7_PLAHL)

HSP 1 Score: 171 bits (432), Expect = 5.410e-50
Identity = 81/158 (51.27%), Postives = 114/158 (72.15%), Query Frame = 3
Query:   60 DITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
            D+ D +   DCYCLN+     + NLF G++ L+L+SDADEQLLL++ F + VKL SI+ VAP  D AP  +KL++NR ++GFSD  D+   QT+EL KEDLV  +   L+FVKFQRV+ +SIFV +NNGA+++ +SSL+FFG P+A T M + KK+ +
Sbjct:   15 DLKDAISIKDCYCLNEDPNKPFRNLFAGNETLVLKSDADEQLLLYIEFQDAVKLFSINIVAPQTDEAPRVIKLFVNRPNLGFSDATDVEATQTIELKKEDLVPENDIELRFVKFQRVTSISIFVEENNGADETIISSLKFFGEPLAGTNMNELKKISD 172          
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A067C2U1_SAPPC (PITH domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2U1_SAPPC)

HSP 1 Score: 169 bits (428), Expect = 1.800e-49
Identity = 82/154 (53.25%), Postives = 111/154 (72.08%), Query Frame = 3
Query:   60 DITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFK 521
            D+T+ + KA+ YCLN+     + NLF GD  L+L+S+ADEQL++H+ F E VK+HSI   AP+DD+AP  +KL++NRN++GFSD  D+ P Q LEL  E L +GS   L+FVKFQRVS L++F+ +NNG + S LSSLR FG P+A T M D K
Sbjct:    8 DLTEQLDKANSYCLNEDPSYGFANLFIGDGTLLLKSEADEQLIIHLEFKEAVKIHSIALKAPTDDSAPRVLKLFVNRNNLGFSDVADIEPVQQLELNDEQLASGSPIELRFVKFQRVSALTLFIEENNGGDISALSSLRLFGEPIAGTNMNDLK 161          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNE4_ECTSI3.180e-119100.00PITH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z9A2_9STRA1.410e-7566.48PITH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6S9JQ99_HETAK1.780e-6059.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TWZ4_9STRA3.440e-5254.43Thioredoxin-like protein 1 n=3 Tax=Monodopsidaceae... [more]
A0A2D4BK42_PYTIN1.140e-5150.57Thioredoxin-like protein, putative n=1 Tax=Pythium... [more]
A0A1V9Z8E4_9STRA5.390e-5155.84Thioredoxin-like protein n=1 Tax=Achlya hypogyna T... [more]
K3WS93_GLOUD1.480e-5050.94PITH domain-containing protein n=1 Tax=Globisporan... [more]
H3GGR7_PHYRM3.820e-5050.00PITH domain-containing protein n=8 Tax=Phytophthor... [more]
A0A0P1B5D7_PLAHL5.410e-5051.27Thioredoxin-like protein n=1 Tax=Plasmopara halste... [more]
A0A067C2U1_SAPPC1.800e-4953.25PITH domain-containing protein n=3 Tax=Saprolegnia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13325contigE-fasciculatus_F_contig13325:126..3108 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.8
Seed ortholog evalue1.3e-63
Seed eggNOG ortholog2880.D8LNE4
GOsGO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748
EggNOG free text desc.protein-disulfide reductase activity
EggNOG OGsKOG0908@1,KOG0908@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGalactose-binding domain-like
Ec32 orthologEc-04_004160.1
Exons5
Model size766
Cds size381
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927834.9110155-UTR-E-fasciculatus_F_contig13325:125..3551622927834.9110155-UTR-E-fasciculatus_F_contig13325:125..355Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13325 126..355 -
1695995715.451643-UTR-E-fasciculatus_F_contig13325:125..3551695995715.451643-UTR-E-fasciculatus_F_contig13325:125..355Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13325 126..355 -
1622927834.9906754-UTR-E-fasciculatus_F_contig13325:1935..20081622927834.9906754-UTR-E-fasciculatus_F_contig13325:1935..2008Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13325 1936..2008 -
1695995715.508483-UTR-E-fasciculatus_F_contig13325:1935..20081695995715.508483-UTR-E-fasciculatus_F_contig13325:1935..2008Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13325 1936..2008 -
1622927835.0066156-UTR-E-fasciculatus_F_contig13325:3026..31081622927835.0066156-UTR-E-fasciculatus_F_contig13325:3026..3108Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13325 3027..3108 -
1695995715.518191-UTR-E-fasciculatus_F_contig13325:3026..31081695995715.518191-UTR-E-fasciculatus_F_contig13325:3026..3108Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13325 3027..3108 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927834.9242897-CDS-E-fasciculatus_F_contig13325:355..4691622927834.9242897-CDS-E-fasciculatus_F_contig13325:355..469Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13325 356..469 -
1695995715.461158-CDS-E-fasciculatus_F_contig13325:355..4691695995715.461158-CDS-E-fasciculatus_F_contig13325:355..469Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13325 356..469 -
1622927834.938448-CDS-E-fasciculatus_F_contig13325:848..10181622927834.938448-CDS-E-fasciculatus_F_contig13325:848..1018Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13325 849..1018 -
1695995715.4711363-CDS-E-fasciculatus_F_contig13325:848..10181695995715.4711363-CDS-E-fasciculatus_F_contig13325:848..1018Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13325 849..1018 -
1622927834.951429-CDS-E-fasciculatus_F_contig13325:1407..14821622927834.951429-CDS-E-fasciculatus_F_contig13325:1407..1482Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13325 1408..1482 -
1695995715.4839902-CDS-E-fasciculatus_F_contig13325:1407..14821695995715.4839902-CDS-E-fasciculatus_F_contig13325:1407..1482Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13325 1408..1482 -
1622927834.969219-CDS-E-fasciculatus_F_contig13325:1913..19351622927834.969219-CDS-E-fasciculatus_F_contig13325:1913..1935Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13325 1914..1935 -
1695995715.4937108-CDS-E-fasciculatus_F_contig13325:1913..19351695995715.4937108-CDS-E-fasciculatus_F_contig13325:1913..1935Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13325 1914..1935 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13325.2501.1prot_E-fasciculatus_F_contig13325.2501.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13325 356..1935 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13325.2501.1

>prot_E-fasciculatus_F_contig13325.2501.1 ID=prot_E-fasciculatus_F_contig13325.2501.1|Name=mRNA_E-fasciculatus_F_contig13325.2501.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=127bp
MLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGF
SDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQ
SCLSSLRFFGTPVATTKMGDFKKVEE*
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mRNA from alignment at E-fasciculatus_F_contig13325:126..3108-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13325.2501.1 ID=mRNA_E-fasciculatus_F_contig13325.2501.1|Name=mRNA_E-fasciculatus_F_contig13325.2501.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2983bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13325:126..3108- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAGCGGGTGCCGCTGCGGCGGGAGCAGCAGCCCCGAAGGCGAGCGACCTA GAAGTACGGGACATCACGGACCTTGTTTGCAAGTGAGTGAGAGATAAAGA TTAGAGCGGCACCAGGCACCAACTCGTGCCCCACGACTGCTGCTGTAAGA AGGAGGCAGAAAGATTGTCCAAGTGATTGACGACCATACTGTAGTGGTAT CACCTTGTACTTGATTGAGAGCCGCTTGAAGGGGCAAGGGAGGGGCACGA GCCTGTTCTTTTGTGCTATACCCATTGGAAACAAGATGGACGCTATGAGC GGACCGCTTGGGTCGTACTACGTACTACTGTACTGTACGCGTGAAAAGTC GCATGCATATGCAGATGCATATTGTAGCAACCATTGTTCTCTCGACACTT CGCAAGTGCAAGCAAAGCTGCTTGACGCCTGCTGAACTGATTCGTTCGTA ATATTGCAATAGATACCTAGTGTGGTGCAATAAACAACTATCTAGAAGTC ACCGTACCCCGAAACACCGCTCGATCAACGGGGGAAGGCTGCATGGTGTG GGCATCCGGGCATGCTGTCCCGATTGTCTCGTTAGAAGTGGGTGCATTGG GAGACAGCGCGAAGCACCACACCCATGCCCATGTTGCTATGCTCGCAAGC ATTCCTTTCGATCATCGAGACCCATCTGTGGAGTGATTTTACTGCGTGAC TAGCGGGGGATGTCTTACATCCCCCGCCCGACCGCCCCCCCCCCAGCTGA TACGGATGGGGTTCACTCTGTGCGTCTTTGGAACCTTTTCCGTTGTCAAG ATAGCAGATGATACTGAAAAAGTTAGCCGAAGAGAGAGCGAATTGTGGTG AAGGACGTTCTGTACGATACTCCCACTGCAGCGACCGCGTCTTGCTTTCC TTGGCCAGGTTTCTTTACAAGGCCAACACCAGGCTGGAACTCGGATAAAA AAACAGAATAGTAAATCGAACCTTCGAGTACGGCACGACATGTTATACGC AGCCCTTCCGTTTCCTTGGCGCATGCTCAAAGGGCGCTAATCAATAGTTG ACCTCATATGTGAACAACCGCGTTGTCTTCCGCTGTTTTCTATTGCGCAG GGCCGATTGTTACTGTCTCAATCAACTCTCGGGAGCAACATGGGAAAACC TCTTCCAGGGGGATGACCGGCTGATGCTTCAGTCGGACGCCGATGGTAAG AATGGTGTGCGGATGTTTTGATGCAGTTCCGCGTGTCTTTGGAATAGACA CACTACTGTGTAAGATTCTCACAGCCTGTAGTTAAACCGTCGAGGCGACG AACACCGCTCGGTCACCTGTTGGAAGGTACAGACGGAGAGTTCGTGCGTG TTTCAGGAAGCCGTATATCGCCGGGGGTCTCTGTTCCCCATGTTGCCATT GATTCGTTCATGCGATTTAACGCTGGTTGTTGCCTTCCTACCCTCGTCGC TTCCTCTGTGGTGCATGTCCCAACCTGCTGTTATTCCGCCGTGGTAACGT TGTTCCTTCGGCTGTTCTGGTGACTGGCGGCGCATCTCCGGTACCCTGGG TTGCTGGTGCGGGGGATTCCCGTCCCTCAATATTGTGTGGTTCCTTCCGG TGCATCACTCCTTGACACGAAACAAGAGCAATTGCTCTTGCATGTGGGCT TCATGGAGACTGTAAAGCTACACTCGATAGACTTCGTCGCCCCTTCGGAT GGTGAGATGCTTGGCGGGCTAAACACCGTTGACGTACCGAATCGGCCTGC TGAAGGGTGGCAACGCCCAGCCGTGTGGTTTTTTGTCTTTCCAAAGCGCC GTATATGGTTGTTGAACTACTGTGTCATTGACGGACGAACCGTGACATTT GTCTTGTCGTGTCTCCGCTGCTGCTTGTCCGTGATGCGTTTGGAGGCTGT TCACGAAAGATGTTCGAAAGCGTTTGTTACCTCACCACTCTGACAGTTTT GTAAGGGTTGAGTGCGTTACGATCAAACATCGGAGTGCATAATTTCTCCT GACTGCAACCCCTACGGCCCAGAGCATGACTCCCACCCTACCCAATCCCT CTTCTCTGTACCTGATCACCCCGTCGGCCAACCAATCAAGACACGGCTCC GTTGACGGTGAAACTCTACCTCAACCGGAACAGCATGGGATTCAGCGACA CGGACGACATGGCGCCCGCGCAAACGTTGGAGCTGACGAAGGAAGACTTG GTAGCGGGTTCGGCGTCTGTGCTGAAGTTCGTTAAGTTTCAAAGGGTCTC CGGCCTTTCGGTGAGTTTCAGCTTCAAGGGTTCCTCCGAAGTGTTCGAAA GGAGATAGAGGAACCCTTTTCCCTCCTTTCCCATGAACGGTCGCTTGTTC ACCTCCTCCAGGTGCGACATGACCATTGACACGCCGGCTACGGTGTGTAG TGTGTTCAGGTTGAAATGGGAAGTAATTTCGATGTACTTCAAGATCTTGT GCTTTGTGTATGCCCCATTTTTTCCTTTTTCCAAAGATCTTTCAACGTTG CACTAGGCAACGCTTCTCCCCCGCATCGGGCCATAGTCGGCCATGCAGGT GCATGCTGCTTGTCAGACCGCGGTGTGGCGCGTGCAGCCTACTTTTTTTC GACAGCTGATGTGTACTTTCGCGATTGCTTGCGTTGTAGATTTTCGTCGC GGACAACAACGGCGCGGAGCAGAGCTGCTTGTCGAGCCTCCGGTTTTTCG GGACCCCCGTGGCAACGACCAAGATGGGAGACTTCAAGAAGGTCGAAGAG TGAGTGACAAGAAGGGGGCGTAGCTTCCGCCTTCACGTTCCGGCACCCAA GGAATAGTAGTCCAGCACGGACGGCCGGGACCATCGACCATGCCTCGTAA ATCGGACGCAACACGAACGAAGCACTAACGCGAGAGAACCAACCGACGCC CCTTCCGTCATTCGTGCGCCGTGCTTGTGACCTCCCGGTCGCCGACCAAG GCCTTTTCTAGCCAGGTTGTGCTGTATTTTGCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13325:126..3108-

>mRNA_E-fasciculatus_F_contig13325.2501.1 ID=mRNA_E-fasciculatus_F_contig13325.2501.1|Name=mRNA_E-fasciculatus_F_contig13325.2501.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=762bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13325:126..3108- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTTCAGTCGGACGCCGATGATGCTTCAGTCGGACGCCGATGAGCAAT
TGCTCTTGCATGTGGGCTTCATGGAGACTGTAAAGCTACACTCGATAGAC
TTCGTCGCCCCTTCGGATGAGCAATTGCTCTTGCATGTGGGCTTCATGGA
GACTGTAAAGCTACACTCGATAGACTTCGTCGCCCCTTCGGATGACACGG
CTCCGTTGACGGTGAAACTCTACCTCAACCGGAACAGCATGGGATTCAGC
GACACGGACGACATGGCGCCCGCGCAAACGTTGGAGCTGACGAAGGAAGA
CTTGGTAGCGGGTTCGGCGTCTGTGCTGAAGTTCGTTAAGTTTCAAAGGG
TCTCCGGCCTTTCGACACGGCTCCGTTGACGGTGAAACTCTACCTCAACC
GGAACAGCATGGGATTCAGCGACACGGACGACATGGCGCCCGCGCAAACG
TTGGAGCTGACGAAGGAAGACTTGGTAGCGGGTTCGGCGTCTGTGCTGAA
GTTCGTTAAGTTTCAAAGGGTCTCCGGCCTTTCGATTTTCGTCGCGGACA
ACAACGGCGCGGAGCAGAGCTGCTTGTCGAGCCTCCGGTTTTTCGGGACC
CCCGTGGCAACGACCAAGATGGGAGACTTCAAGAAGGTCGAAGAGTGAAT
TTTCGTCGCGGACAACAACGGCGCGGAGCAGAGCTGCTTGTCGAGCCTCC
GGTTTTTCGGGACCCCCGTGGCAACGACCAAGATGGGAGACTTCAAGAAG
GTCGAAGAGTGA
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