mRNA_E-fasciculatus_F_contig13325.2501.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: D8LNE4_ECTSI (PITH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE4_ECTSI) HSP 1 Score: 347 bits (889), Expect = 3.180e-119 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 3
Query: 3 AGAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
AGAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE
Sbjct: 6 AGAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 182
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A835Z9A2_9STRA (PITH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A2_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.410e-75 Identity = 117/176 (66.48%), Postives = 142/176 (80.68%), Query Frame = 3
Query: 6 GAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
G A AAA A++ EVRD+ DL+ KA+C+CLN+ ATW NLF GDDRL+L SDADEQLLLH+GF ETVKLHSI+F A +DD+AP TVKL++NR+SMGFSD +D+ QTLELT EDL SA++LKFVKFQRVS +SIFV +NNGAE + LSS++FFG PVATTKM +FKK EE
Sbjct: 7 GVPANAAAAAPAAEFEVRDLNDLISKAECFCLNEKPSATWRNLFMGDDRLLLTSDADEQLLLHIGFNETVKLHSINFQALNDDSAPATVKLFINRDSMGFSDCEDIEATQTLELTAEDLKPDSATLLKFVKFQRVSSISIFVEENNGAESTSLSSIKFFGAPVATTKMSEFKKQEE 182
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A6S9JQ99_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JQ99_HETAK) HSP 1 Score: 197 bits (502), Expect = 1.780e-60 Identity = 105/176 (59.66%), Postives = 132/176 (75.00%), Query Frame = 3
Query: 6 GAAAAGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTA--PLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKV 527
G AAA AAA + E+RDITDL+ KA CYCLN+ G +NLF GDDRL L+S+ADEQLLLH+ F ETVK+HSI+F +P+DD P+TVKL++NR+SMGFSD +D+ P Q LEL EDL +A +LKFVKFQRV+ L IF+ DNNGA+ + LSS++ FG PVA T M + KKV
Sbjct: 6 GQAAAKAAAVPSQ--EIRDITDLLNKAGCYCLNEDPGYKMQNLFMGDDRLQLRSEADEQLLLHLDFNETVKIHSINFQSPADDPEAHPVTVKLFVNRDSMGFSDANDITPVQELELGPEDLGPDAACLLKFVKFQRVNSLIIFIEDNNGADYTSLSSIKIFGVPVAGTNMSELKKV 179
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: W7TWZ4_9STRA (Thioredoxin-like protein 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWZ4_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.440e-52 Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 3
Query: 51 EVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKK 524
E+ DITD + K +C+ LN WENLF GDDRL L+SD DEQL+LH+ F E VK+HS++ VAP + AP TVKLYLN+ S F D +++ P Q LELT+ED A ++LKFVKFQRVS L+IFV +NNGA+ + LS LR FGTP+ T + +K
Sbjct: 16 EIVDITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A2D4BK42_PYTIN (Thioredoxin-like protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK42_PYTIN) HSP 1 Score: 176 bits (445), Expect = 1.140e-51 Identity = 88/174 (50.57%), Postives = 119/174 (68.39%), Query Frame = 3
Query: 18 AGAAAPKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVA--GSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
A AA PK S RD+ D + +A CYCLN+ + NLF GDD L+L+SDADEQL+LH+ F + VKLHS+ VAP+ +TAP +KLY NR ++GFSD D+ P QT+EL+ +A G L+FVKFQRV L+IFV +N+GAE + L++L+ FG P+A T M + KKV +
Sbjct: 4 AAAAQPKTSRAGFRDLGDAISRAGCYCLNEHPSFPFANLFMGDDTLLLKSDADEQLILHIEFQDAVKLHSLHLVAPAGETAPRVIKLYANRANLGFSDAGDVEPTQTIELSDPAELAKPGKDIELRFVKFQRVKSLTIFVEENHGAEDTALANLKLFGEPIAGTNMNELKKVAD 177
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A1V9Z8E4_9STRA (Thioredoxin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8E4_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.390e-51 Identity = 86/154 (55.84%), Postives = 114/154 (74.03%), Query Frame = 3
Query: 60 DITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFK 521
DI++ + KA+ YCLN+ + NLF GD L+L+S+ADEQL++HV F E VKLHSI AP+DDTAP +KL++NRN++GFSD D+ P Q +EL++E L AGS L+FVKFQRV+ L++FV +NNG + S LSSLRFFG P+A T M D K
Sbjct: 7 DISEHLDKANSYCLNEDPSHNFGNLFIGDGTLLLKSEADEQLIIHVEFKEAVKLHSIALKAPNDDTAPRVLKLFVNRNNLGFSDVVDIEPVQQIELSQEQLDAGSPIELRFVKFQRVTALTLFVEENNGGDISTLSSLRFFGEPIAGTNMNDLK 160
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: K3WS93_GLOUD (PITH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS93_GLOUD) HSP 1 Score: 172 bits (435), Expect = 1.480e-50 Identity = 81/159 (50.94%), Postives = 112/159 (70.44%), Query Frame = 3
Query: 57 RDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
+D+TD +++CYCLN+ + NLF GD L L+SDADEQL+LH+ F + VK+HSI+ +AP +TAP VKL+ NR S+GFSD D+ P QT+ELT EDL L+FVKFQRV ++IFV +NNGAE++ +SSL+ FG +A T M + KK+ +
Sbjct: 6 KDLTDSFSRSECYCLNENPSHPFGNLFIGDGTLQLKSDADEQLILHLEFQDAVKIHSINIMAPPGETAPRVVKLFANRTSLGFSDAGDIEPTQTIELTDEDLEPNKEIELRFVKFQRVKSVTIFVEENNGAEETVISSLKLFGERIAGTNMNELKKISD 164
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: H3GGR7_PHYRM (PITH domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GGR7_PHYRM) HSP 1 Score: 171 bits (433), Expect = 3.820e-50 Identity = 79/158 (50.00%), Postives = 113/158 (71.52%), Query Frame = 3
Query: 60 DITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
D+ + + DCYCLN+ + NLF GDD L L+SDADEQL+L++ F + VK+ S++ VAPS + AP +KLY+NR ++GFSD D+ P QT+EL EDL+ + L+FVKFQRV +++FV +NNGAE++ +SSL+FFG P+A T M + KKV +
Sbjct: 15 DLKEAISVKDCYCLNEDPNKPFRNLFMGDDTLQLKSDADEQLMLYIEFQDAVKVFSLNIVAPSGEEAPRVIKLYVNRPNLGFSDATDVEPTQTIELKDEDLLPENDVELRFVKFQRVKNITVFVEENNGAEETVISSLKFFGEPLAGTNMNELKKVSD 172
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A0P1B5D7_PLAHL (Thioredoxin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5D7_PLAHL) HSP 1 Score: 171 bits (432), Expect = 5.410e-50 Identity = 81/158 (51.27%), Postives = 114/158 (72.15%), Query Frame = 3
Query: 60 DITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKKVEE 533
D+ D + DCYCLN+ + NLF G++ L+L+SDADEQLLL++ F + VKL SI+ VAP D AP +KL++NR ++GFSD D+ QT+EL KEDLV + L+FVKFQRV+ +SIFV +NNGA+++ +SSL+FFG P+A T M + KK+ +
Sbjct: 15 DLKDAISIKDCYCLNEDPNKPFRNLFAGNETLVLKSDADEQLLLYIEFQDAVKLFSINIVAPQTDEAPRVIKLFVNRPNLGFSDATDVEATQTIELKKEDLVPENDIELRFVKFQRVTSISIFVEENNGADETIISSLKFFGEPLAGTNMNELKKISD 172
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Match: A0A067C2U1_SAPPC (PITH domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2U1_SAPPC) HSP 1 Score: 169 bits (428), Expect = 1.800e-49 Identity = 82/154 (53.25%), Postives = 111/154 (72.08%), Query Frame = 3
Query: 60 DITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFK 521
D+T+ + KA+ YCLN+ + NLF GD L+L+S+ADEQL++H+ F E VK+HSI AP+DD+AP +KL++NRN++GFSD D+ P Q LEL E L +GS L+FVKFQRVS L++F+ +NNG + S LSSLR FG P+A T M D K
Sbjct: 8 DLTEQLDKANSYCLNEDPSYGFANLFIGDGTLLLKSEADEQLIIHLEFKEAVKIHSIALKAPTDDSAPRVLKLFVNRNNLGFSDVADIEPVQQLELNDEQLASGSPIELRFVKFQRVSALTLFIEENNGGDISALSSLRLFGEPIAGTNMNDLK 161 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13325.2501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13325.2501.1 >prot_E-fasciculatus_F_contig13325.2501.1 ID=prot_E-fasciculatus_F_contig13325.2501.1|Name=mRNA_E-fasciculatus_F_contig13325.2501.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=127bp MLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFback to top mRNA from alignment at E-fasciculatus_F_contig13325:126..3108- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13325.2501.1 ID=mRNA_E-fasciculatus_F_contig13325.2501.1|Name=mRNA_E-fasciculatus_F_contig13325.2501.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2983bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13325:126..3108- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13325:126..3108- >mRNA_E-fasciculatus_F_contig13325.2501.1 ID=mRNA_E-fasciculatus_F_contig13325.2501.1|Name=mRNA_E-fasciculatus_F_contig13325.2501.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=762bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13325:126..3108- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |