mRNA_E-fasciculatus_F_contig13318.2491.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: A0A6H5K1G5_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G5_9PHAE) HSP 1 Score: 244 bits (623), Expect = 4.520e-79 Identity = 123/149 (82.55%), Postives = 129/149 (86.58%), Query Frame = 1
Query: 52 LKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLAANGGTATGRSALVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKNTVEAVGARARARKMAAKSXXXXXXXXXXXXXXMIAADGRG 498
++ YCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLA +GGTAT SALVHNTGCGCSKSACLKRYCECFNGGIACS+KCRCKDCKNT +AVGARARA+ MAAKS MIAADGRG
Sbjct: 1 MRRYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLATSGGTATA-SALVHNTGCGCSKSACLKRYCECFNGGIACSNKCRCKDCKNTAKAVGARARAKMMAAKSSCGA----------MIAADGRG 138
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: D8LP28_ECTSI (TSO1 transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP28_ECTSI) HSP 1 Score: 142 bits (359), Expect = 2.350e-36 Identity = 68/122 (55.74%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 22 EGCSCKKSMCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFK-TEKVLAANGGTATGRSALVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKNTV 384
+GC+CK+S CLKLYCQCFA Q+VC+ +C C +CYN+A R A+ +L R+P AFDAKF+ TEK A+VH TGC C KSACLK+YCECFN G+ACS+KC C C+NTV
Sbjct: 24 DGCNCKRSKCLKLYCQCFAMQVVCTASCNCHHCYNNANQESMRLQAINGVLERNPAAFDAKFRETEK-----------HDAVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVGCRNTV 134
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: A0A6H5JPL0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL0_9PHAE) HSP 1 Score: 141 bits (355), Expect = 9.390e-36 Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 22 EGCSCKKSMCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFK-TEKVLAANGGTATGRSALVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKNTV 384
+GC+CK+S CLKLYCQCFA Q+VC+ +C C +CYN++ R A+ +L R+P AFDAKF+ TEK A+VH TGC C KSACLK+YCECFN G+ACS+KC C C+NTV
Sbjct: 378 DGCNCKRSKCLKLYCQCFAMQVVCTASCNCHHCYNNSNQESMRLQAINGVLERNPAAFDAKFRETEK-----------HDAVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVACRNTV 488
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: D7FZ03_ECTSI (CRC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ03_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.570e-34 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1
Query: 46 MCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE 216
MCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE
Sbjct: 1 MCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE 57
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: A0A1Z5JA25_FISSO (CRC domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA25_FISSO) HSP 1 Score: 130 bits (327), Expect = 4.410e-33 Identity = 60/120 (50.00%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 25 GCSCKKSMCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLAANGGTATGRSA--LVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKN 378
GC+CKK+ CLKLYCQCF +L C CRC NCYN +R+ A++ +L R+P AFD+KFK + AT R+A L H GC C KS+C+K+YCEC+ G + CS CRC +CKN
Sbjct: 189 GCTCKKTRCLKLYCQCFQAELYCGSNCRCLNCYNVVAEDAKRKEAIQSILLRNPSAFDSKFKKD--------AATERAARELAHKLGCKCRKSSCMKKYCECYAGNVKCSANCRCINCKN 300
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: A0A7S0DST4_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DST4_9EUKA) HSP 1 Score: 129 bits (325), Expect = 5.290e-33 Identity = 64/120 (53.33%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 28 CSCKKSMCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLAANGGTATGRSALVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKNTVE 387
C+CK S CLKLYC+CFA C D C C+NC N+ E ER+ A+R L R+PHAF K T + A G SALVHN GC C KS C K+YCECF GI CS++C+C DC+NT E
Sbjct: 28 CNCKASHCLKLYCECFASSEYCRD-CNCKNCRNNEEFQKERQHAIRYTLERNPHAFLPKIATSPMREA--GARDPASALVHNKGCQCKKSHCRKKYCECFQAGILCSERCKCHDCENTAE 144
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: A0A7S3QD94_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QD94_9STRA) HSP 1 Score: 129 bits (323), Expect = 6.980e-32 Identity = 61/133 (45.86%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 25 GCSCKKSMCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKV--LAANGGTATG-------------RSALVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKN 378
GC+CKKS CLKLYCQCFA + +C + CRC +C N+ +H +R AA++ ++ R+P AF+ KFK ++ LA + G G R + H GC C +SACLK+YCECF+ + CSD CRC CKN
Sbjct: 37 GCTCKKSKCLKLYCQCFAAKAICEERCRCLDCKNNPQHSKDRSAAIQTIMLRNPTAFETKFKKMQLQGLAGSSGGKGGMNGSKSGGGGMGMRVRVEHKVGCKCRRSACLKKYCECFHAQVKCSDTCRCVGCKN 169
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: A0A1Z5K659_FISSO (CRC domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K659_FISSO) HSP 1 Score: 127 bits (320), Expect = 8.130e-32 Identity = 60/124 (48.39%), Postives = 78/124 (62.90%), Query Frame = 1
Query: 25 GCSCKKSMCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLAANGGTATGRSA------LVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKN 378
GC+CKK+ CLKLYCQCF +L C CRC +CYN +R+ A++ +L R+P AFD+KFK + V T RSA L H GC C KS+C+K+YCEC+ G + CS CRC +CKN
Sbjct: 217 GCTCKKTRCLKLYCQCFQAELYCGTNCRCLSCYNVVAEEAKRKEAIQSILLRNPSAFDSKFKKDGV--------TERSAHELARELAHKLGCKCRKSSCMKKYCECYAGNVRCSSNCRCINCKN 332
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: A0A7S1C0F8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0F8_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.070e-31 Identity = 65/127 (51.18%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 25 GCSCKKSMCLKLYCQCFAGQLVCSDA-CRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLAANGGTATGRSALVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKNTVEAVGAR 402
GC+CKKS CLKLYCQCFA +C A CRC CYN+ H R+ A+ +L R+P AFD KF + A + T TG H GC C KSACLK+YCECFN G+ CS CRC +C+N A+ R
Sbjct: 296 GCTCKKSKCLKLYCQCFAASQLCDSAICRCLVCYNTEAHYSIRKEAIAAILERNPTAFDKKFMDKTTSAGSRSTKTG----AHKVGCKCRKSACLKKYCECFNMGVKCSQNCRCINCQNEDPAMPPR 418
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Match: I2CP39_NANGC (Tesmin tso1-like cxc domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP39_NANGC) HSP 1 Score: 127 bits (318), Expect = 2.820e-31 Identity = 61/120 (50.83%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 25 GCSCKKSMCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLAANGGTATGRSALVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDCKNTV 384
GC+CK+S CLKLYCQCFA Q C +C C+NC N+A R A+R+++ R+P+AF KF+ NG A VH GC C KSACLK+YCECFN G CSDKC C C+N
Sbjct: 224 GCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRP------NGEDA------VHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVA 331 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13318.2491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13318.2491.1 >prot_E-fasciculatus_F_contig13318.2491.1 ID=prot_E-fasciculatus_F_contig13318.2491.1|Name=mRNA_E-fasciculatus_F_contig13318.2491.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=166bp AATSSALEGCSCKKSMCLKLYCQCFAGQLVCSDACRCENCYNSAEHGVERback to top mRNA from alignment at E-fasciculatus_F_contig13318:954..3262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13318.2491.1 ID=mRNA_E-fasciculatus_F_contig13318.2491.1|Name=mRNA_E-fasciculatus_F_contig13318.2491.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2309bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13318:954..3262- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13318:954..3262- >mRNA_E-fasciculatus_F_contig13318.2491.1 ID=mRNA_E-fasciculatus_F_contig13318.2491.1|Name=mRNA_E-fasciculatus_F_contig13318.2491.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=996bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13318:954..3262- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |