mRNA_E-fasciculatus_F_contig13317.2490.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: D7G9I1_ECTSI (Cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I1_ECTSI) HSP 1 Score: 442 bits (1138), Expect = 3.470e-145 Identity = 248/272 (91.18%), Postives = 252/272 (92.65%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIELGNACRSVAAKRPKPNTAVAGAGHRGGEEGGGA-DVTVEDSVVEGGGSEGSGEGADVVEXXXXXXXXXXXGEDGGDDEAGRWKVVDARGKARFFDEV 813
FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLK NGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIELGNACRSVAAKRPKP T+ A AGH+G E+GGG DV VEDSVVEG GSEGS XXXXXXXXXXX D GDDEAGRW+VVDARGKARFFDEV
Sbjct: 90 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKANGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIELGNACRSVAAKRPKPATSEA-AGHQGEEKGGGGVDVVVEDSVVEGAGSEGS---XXXXXXXXXXXXXXXXXXDHGDDEAGRWRVVDARGKARFFDEV 357
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: A0A835Z030_9STRA (Amine oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z030_9STRA) HSP 1 Score: 206 bits (523), Expect = 2.820e-62 Identity = 102/145 (70.34%), Postives = 120/145 (82.76%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQV 435
FMVFN QNYPN+V LF+ELGV E TDMSF+VSLD G EWGS +++L AR+ NAL P F+ ML +MARFN+EAP LL+LDDEDPRK+++V EYL+ N +S AFARYYLVPMAAALWSS+ A+VMG SAL MISFFHNH MLQV
Sbjct: 91 FMVFNHQNYPNLVGLFKELGVEEESTDMSFAVSLDGGAFEWGSASVAALLARRTNALRPSFWRMLADMARFNREAPALLQLDDEDPRKAMTVGEYLRRNNYSAAFARYYLVPMAAALWSSSGAEVMGFSALTMISFFHNHSMLQV 235
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: A0A7S2REM9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REM9_9STRA) HSP 1 Score: 211 bits (537), Expect = 7.290e-59 Identity = 102/180 (56.67%), Postives = 135/180 (75.00%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIELGNAC 540
FMV+N+QNYPN+ LF ELGV + TDMSFSVS+D G EW GL+ LFA +++ +SP FY MLR+M RFN+EAP LL L D+DPRK+V++REYL+ N +SEAFA+ +L+PM A+WS++ ADV+ AL++I+FF+NHQMLQV GRPQW TPA RSR+YV I + E + +C
Sbjct: 68 FMVYNDQNYPNINGLFAELGVVGQNTDMSFSVSMDGGRFEWSGTGLNGLFACRKHLVSPSFYLMLRDMLRFNREAPDLLRLPDQDPRKAVTMREYLRQNRYSEAFAKLFLIPMVGAVWSASEADVLSFPALSLIAFFNNHQMLQVVGRPQWRTPARRSREYVDAIAAELQEQGASVRTSC 247
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: A0A8J9T3Q6_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T3Q6_PHATR) HSP 1 Score: 185 bits (470), Expect = 3.140e-53 Identity = 94/184 (51.09%), Postives = 123/184 (66.85%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGD-VEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIELGNACRSV 549
FMV+NE NYPNMV F LGV E +DMS SVSLD GD VEW S+GL LFA +R +SP FY L++M RFNQ+A +L L D+DPRK V+ +YL+ +G+S FA++Y+ PM AALWS++ DV+ A +I F NH+MLQ+F RPQW T AGRS+QY + +G + + L V
Sbjct: 66 FMVYNETNYPNMVEWFRTLGVTQEDSDMSLSVSLDGGDTVEWSSDGLDGLFANRRQLVSPPFYRFLKDMIRFNQQAANILLLTDDDPRKHVTTAQYLREHGYSTEFAKFYVFPMMAALWSASMEDVLRFPAAQLIGFLCNHKMLQLFDRPQWKTVAGRSQQYTNLVQSILGFEAVHLDTPVHKV 249
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: A0A6H5JX97_9PHAE (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX97_9PHAE) HSP 1 Score: 178 bits (451), Expect = 1.540e-52 Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSV 270
FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRN LSPGFYGMLREMARFNQEAPRLLELDDEDPRK+V
Sbjct: 90 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNVLSPGFYGMLREMARFNQEAPRLLELDDEDPRKAV 179
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: A0A7S2DZ66_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZ66_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.890e-52 Identity = 90/169 (53.25%), Postives = 125/169 (73.96%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRI 507
FMV N++NYPN+ LF+ELGV + T+MSFSVS+DDG+VEW GL+ LFA + N +S FY MLR++ +FN+EAP LL L +DP+ +S+R+YL NG+S+AF R Y+VP+ A+WS+ +A V+G A++++SF HNHQMLQ+ RP W TP RSR YV +I R+
Sbjct: 89 FMVMNDRNYPNLNGLFKELGVETIPTEMSFSVSVDDGEVEWSGTGLNGLFASRGNIISKDFYTMLRDVFKFNREAPSLLALPKDDPKTRLSMRDYLNANGYSQAFRRLYMVPLVGAIWSTDSAGVLGFDAVSLVSFMHNHQMLQILNRPHWKTPKFRSRDYVNKIALRL 257
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: A0A7S2SHN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SHN9_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.960e-52 Identity = 94/190 (49.47%), Postives = 123/190 (64.74%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGD-VEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIELGNACRSVAAKRPK 567
FMV+N+ NYPNM F++LGV SE +DMS SVSLDDG VEW S+G L A K P FY L++M RFN EA ++L L EDPR+ V++ +YLK G+S+ F +YL PM AALWSS+ DV+ A +I F NH+MLQ+F RPQW T AGRS+ Y +I +G K+ L +C ++ K K
Sbjct: 79 FMVYNDHNYPNMCHWFKQLGVESEPSDMSLSVSLDDGKKVEWSSDGFQGLIANKAQLFRPSFYRFLKDMVRFNAEAGKILTLSPEDPRRHVTLGQYLKNEGYSQEFTTHYLFPMTAALWSSSMGDVLNFPADQLIGFMCNHKMLQIFDRPQWKTTAGRSKTYTNKIEEIMGIKKVHL--SCPIISIKSLK 266
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: B7G7I7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7I7_PHATC) HSP 1 Score: 185 bits (470), Expect = 1.010e-49 Identity = 94/184 (51.09%), Postives = 123/184 (66.85%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGD-VEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIELGNACRSV 549
FMV+NE NYPNMV F LGV E +DMS SVSLD GD VEW S+GL LFA +R +SP FY L++M RFNQ+A +L L D+DPRK V+ +YL+ +G+S FA++Y+ PM AALWS++ DV+ A +I F NH+MLQ+F RPQW T AGRS+QY + +G + + L V
Sbjct: 66 FMVYNETNYPNMVEWFRTLGVTQEDSDMSLSVSLDGGDTVEWSSDGLDGLFANRRQLVSPPFYRFLKDMIRFNQQAANILLLTDDDPRKHVTTAQYLREHGYSTEFAKFYVFPMMAALWSASMEDVLRFPAAQLIGFLCNHKMLQLFDRPQWKTVAGRSQQYTNLVQSILGFEAVHLDTPVHKV 249
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: A0A448ZB87_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZB87_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.820e-45 Identity = 91/186 (48.92%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELG-VGSEKTDMSFSVSLDDGD-VEWGSEG-LSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIELGNACRSV 549
FMV+N NYPNM + FE LG V E TDMS SVSLD GD +EW S G L+ LFA++ + FY M+R+M RF+ EA +LL + ++DPRK V+VR YL+ NG++ +F YYL+PM AALWS++ V+ A +I F NH+MLQ+FGRPQW T GRS+ Y + + +GE ++ L S+
Sbjct: 72 FMVYNAANYPNMTKWFEALGGVEEEDTDMSLSVSLDKGDSLEWTSNGGLNGLFAKRGQLVDSNFYAMVRDMTRFHDEAXKLLLMSEDDPRKHVTVRHYLRQNGYTPSFGVYYLLPMMAALWSASMEXVLEFPARQLIGFLCNHRMLQLFGRPQWKTVKGRSQTYTKRVGEILGEKQVRLSTXIDSM 257
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Match: A0A1E7FIA1_9STRA (CMAS-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FIA1_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.070e-45 Identity = 87/177 (49.15%), Postives = 118/177 (66.67%), Query Frame = 1
Query: 1 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGD-VEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKVNGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQVFGRPQWMTPAGRSRQYVREICRRIGEDKIEL 528
FMVFNE NYPNM + FE L V +E +DMS SVSLD GD +EW S GL +FA++ FY ML +M +F+ EAP+ L L +DPR+ ++ ++YLK +S FA YYL+PM AALWS++ +V+ A+ +ISF NHQMLQ+F RPQW T GRS Y + + +G+ K+ L
Sbjct: 82 FMVFNETNYPNMTKWFEVLSVLTENSDMSLSVSLDGGDTLEWSSNGLDGVFAKRSQLYDRKFYKMLNDMNKFHIEAPKFLLLHKDDPRRLITTKQYLKQYNYSNEFAIYYLLPMMAALWSASMENVLDFPAIQLISFLCNHQMLQLFNRPQWKTVKGRSHTYTKRVQEILGKKKVRL 258 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13317.2490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13317.2490.1 >prot_E-fasciculatus_F_contig13317.2490.1 ID=prot_E-fasciculatus_F_contig13317.2490.1|Name=mRNA_E-fasciculatus_F_contig13317.2490.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=270bp MVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFAback to top mRNA from alignment at E-fasciculatus_F_contig13317:101..2452- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13317.2490.1 ID=mRNA_E-fasciculatus_F_contig13317.2490.1|Name=mRNA_E-fasciculatus_F_contig13317.2490.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2352bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13317:101..2452- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13317:101..2452- >mRNA_E-fasciculatus_F_contig13317.2490.1 ID=mRNA_E-fasciculatus_F_contig13317.2490.1|Name=mRNA_E-fasciculatus_F_contig13317.2490.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1620bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13317:101..2452- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |