mRNA_E-fasciculatus_F_contig13313.2487.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A6H5KJ03_9PHAE (Aminotran_1_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJ03_9PHAE) HSP 1 Score: 169 bits (427), Expect = 1.140e-48 Identity = 82/86 (95.35%), Postives = 85/86 (98.84%), Query Frame = 1
Query: 1 AFMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAVIKEYREKQ 258
AFMEEKLPELR+DPMEATYLAWVDVTKLGWKSPA+EFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRME+AVI EYREKQ
Sbjct: 376 AFMEEKLPELRLDPMEATYLAWVDVTKLGWKSPAMEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMEQAVIIEYREKQ 461
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A7C1UAN5_9BACT (Putative C-S lyase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C1UAN5_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 2.170e-22 Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 4 FMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAV 234
F+ +K+P L MD +EATYLAW+D LG +P FE+AGVGL+DG F GEGYVR+NF CPRE L++ L RM+RAV
Sbjct: 301 FINDKIPRLSMDDVEATYLAWIDAGSLGVPAPDRFFEQAGVGLSDGGNFQGEGYVRLNFGCPRETLLKALDRMKRAV 377
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A532UPF5_9BACT (Aspartate aminotransferase n=1 Tax=Planctomycetes bacterium B3_Pla TaxID=2012488 RepID=A0A532UPF5_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 4.110e-20 Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 4 FMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAV 234
F+ E++P L MD ++ATYLAW+D L PAL FERAGVGL+DG+ F EGYVR++F CP++ L++ L RM+RAV
Sbjct: 301 FVNEEIPRLSMDDVQATYLAWIDAGGLEVPDPALFFERAGVGLSDGRHFQAEGYVRLSFGCPQKNLLDALDRMKRAV 377
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A424R3A4_9BACT (Putative C-S lyase n=2 Tax=Puniceicoccaceae TaxID=415002 RepID=A0A424R3A4_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 2.110e-19 Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 4 FMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAVIK 240
F++ +LP ++ PM+ATYLAW+DV+ LG PA FE GVGL+DG F G G++R+NF CPR+ L+E L ++ RAV K
Sbjct: 306 FVQRELPGIQFXPMQATYLAWLDVSALGLARPAAHFEAHGVGLSDGTPFHGRGHLRLNFGCPRDRLLEALEKIARAVEK 384
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A1U9NLZ3_9BACT (Cystathionine beta-lyase PatB n=1 Tax=Anaerohalosphaera lusitana TaxID=1936003 RepID=A0A1U9NLZ3_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 2.820e-19 Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 4 FMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAV 234
F+ E++PEL + +EATYLAW+D LG PA F GVGL DGK F EG+VR+NF CPR LM+GL RM+ AV
Sbjct: 301 FVNERIPELSAENIEATYLAWIDARSLGPDDPARFFAEHGVGLLDGKEFGAEGFVRLNFGCPRRTLMQGLTRMQTAV 377
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A0S8GWH4_9BACT (Aspartate aminotransferase n=1 Tax=Phycisphaerae bacterium SM23_30 TaxID=1703411 RepID=A0A0S8GWH4_9BACT) HSP 1 Score: 89.4 bits (220), Expect = 4.200e-19 Identity = 41/79 (51.90%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 4 FMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAVIK 240
F++ ++P L MD +EATYLAWVDV+ L P FE AGVGL+DG+ + G GYVR+NF CP+++L++ L +M++AV K
Sbjct: 301 FIKNEIPLLSMDHIEATYLAWVDVSLLNEADPIRFFENAGVGLSDGRDYEGPGYVRLNFGCPQKVLLQALEKMKQAVAK 379
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: D5EJR4_CORAD (Aminotransferase class I and II n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5EJR4_CORAD) HSP 1 Score: 89.0 bits (219), Expect = 5.610e-19 Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 4 FMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAV 234
F+ E+LPE+ PMEATYLAW DVTKL +P FE GVGL+DG F G +VR+NF CP+ L+EGL ++ERA+
Sbjct: 306 FIREQLPEITFRPMEATYLAWFDVTKLELDNPIKFFEDNGVGLSDGVPFDGNQHVRLNFGCPQSRLIEGLEKIERAI 382
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A1Z9G9Z1_9BACT (Aspartate aminotransferase n=1 Tax=Puniceicoccaceae bacterium TMED149 TaxID=1986788 RepID=A0A1Z9G9Z1_9BACT) HSP 1 Score: 88.2 bits (217), Expect = 1.080e-18 Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 1 AFMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAVIKE 243
+F+EE +P++ PM+ATYLAW++ ++L KSP FE+ G+GL+DG F YVR+NF CP+ L+EGL RM A+ KE
Sbjct: 301 SFIEESMPQIVFKPMQATYLAWLNTSQLNIKSPTQFFEKHGIGLSDGTPFGDSNYVRLNFGCPKNRLIEGLERMHEALKKE 381
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A835ZGK3_9STRA (Aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK3_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.240e-18 Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 4 FMEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERAV 234
F+ + PE+ PM ATYLAW+DV L W+ P LEFER GVGLTDG+ F GYVR+NF PR L EGL R+ V
Sbjct: 394 FLCARAPEVIAHPMAATYLAWLDVRALAWRDPVLEFERGGVGLTDGRFFGAPGYVRLNFGLPRWRLEEGLERLAAVV 470
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Match: A0A645HGH6_9ZZZZ (Uncharacterized protein n=1 Tax=bioreactor metagenome TaxID=1076179 RepID=A0A645HGH6_9ZZZZ) HSP 1 Score: 81.6 bits (200), Expect = 1.380e-18 Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 19 LPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGEGYVRINFACPREMLMEGLRRMERA 231
LP +RM P+EATYLAW+D+ L + PA FE G+GL+DG F G++R+NF CPR L E LRR ERA
Sbjct: 4 LPGIRMAPVEATYLAWLDIRDLKLEHPAAHFEAHGLGLSDGTAFGAPGWLRLNFGCPRTTLDEALRRFERA 74 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13313.2487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13313.2487.1 >prot_E-fasciculatus_F_contig13313.2487.1 ID=prot_E-fasciculatus_F_contig13313.2487.1|Name=mRNA_E-fasciculatus_F_contig13313.2487.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=86bp MEEKLPELRMDPMEATYLAWVDVTKLGWKSPALEFERAGVGLTDGKGFLGback to top mRNA from alignment at E-fasciculatus_F_contig13313:1..577+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13313.2487.1 ID=mRNA_E-fasciculatus_F_contig13313.2487.1|Name=mRNA_E-fasciculatus_F_contig13313.2487.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=577bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13313:1..577+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13313:1..577+ >mRNA_E-fasciculatus_F_contig13313.2487.1 ID=mRNA_E-fasciculatus_F_contig13313.2487.1|Name=mRNA_E-fasciculatus_F_contig13313.2487.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=516bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13313:1..577+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |