mRNA_E-fasciculatus_F_contig13306.2484.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: A0A6H5JH17_9PHAE (Clu domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH17_9PHAE) HSP 1 Score: 233 bits (594), Expect = 1.270e-68 Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 1
Query: 4 SMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAFHPQLSIKTLATAVVDFGGRRLIAQSLVPGILN 375
S+TRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEA HPQLSIKTLATAVVDFGGRRLIAQSLVPGILN
Sbjct: 418 SLTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAVHPQLSIKTLATAVVDFGGRRLIAQSLVPGILN 541
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: F0ZN50_DICPU (Clu domain-containing protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZN50_DICPU) HSP 1 Score: 110 bits (274), Expect = 1.640e-25 Identity = 58/125 (46.40%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 1 QSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAFHPQLSIKTLATAVVDFGGRRLIAQSLVPGILN 375
+ + R RA+ K+ DF + AT GA ++D +PP NPT+ E SH++++NNIFFS+A D+ D YK GD+AAR SA+ DL + NL + TL TA++D+ G+R+IAQSLVPGIL+
Sbjct: 378 ERIIRDRAIAKVNADFVECATRGAQIVADKALPPINPTDPERSHMYLYNNIFFSHALDTRDTYKDCGGDAAARTSANNDLKGIRLYNLADVE-----GLYTLGTAIIDYKGQRIIAQSLVPGILS 497
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: A0A4D9CWV2_9STRA (Clu domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV2_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.250e-25 Identity = 58/136 (42.65%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 1 QSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALN-LLGEAFH----------PQLSIKTLATAVVDFGGRRLIAQSLVPGILN 375
+ + R++ LH++L DF +AA AGA+A+ GF+ P NP EA +HV+VFNNIFFSYA ++ + +K + GD A K+A ++ ++ LN +L +A P + TLAT+V+D+ G RL+AQS++PGIL+
Sbjct: 422 EKIVRAKVLHRVLADFGEAAVAGALAVVQGFVVPINPNEARRNHVYVFNNIFFSYALETQNTFKVIEGDGPAFKNALHEVRNIRVLNKVLADAGDQIAASPSDPVPPPRLHTLATSVIDYLGVRLVAQSVIPGILS 557
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: A0A7S2D7Q1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7Q1_9STRA) HSP 1 Score: 108 bits (269), Expect = 7.850e-25 Identity = 64/152 (42.11%), Postives = 84/152 (55.26%), Query Frame = 1
Query: 1 QSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAF-------------------------HPQLSIKTLATAVVDF--GGRRLIAQSLVPGILN 375
+ + R++ ++K+ DFQ+AA GA AIS G +PP NPTE HV+VFNN+FFSY DS DAYK + GD AA KSA DL +V L+ P + TLATA+VD G+RL+AQS++PGIL
Sbjct: 650 EKLNRAKMVYKVWLDFQEAAMNGAAAISAGHVPPINPTEPTRQHVYVFNNLFFSYGVDSKDAYKVLGGDGAAVKSARHDLRNVQLLDYYQRTIGLGTVDKEKDDVTPPTGCFAEPGTVSPDERLCTLATAIVDLPCAGKRLVAQSIIPGILQ 801
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: F4PU53_CAVFA (Uncharacterized protein cluA n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PU53_CAVFA) HSP 1 Score: 107 bits (267), Expect = 1.440e-24 Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 1
Query: 1 QSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAFHPQLSIKTLATAVVDFGGRRLIAQSLVPGILN 375
+ + R RAL K+ DF DAAT GA + + IPP NP E E +H+FV+NNIFFS++ D+ D Y GD AAR +A+ DL V NL+ I T+ TA++D+ G R+IAQSLVPGIL+
Sbjct: 419 ERVLRDRALVKVNADFVDAATRGAQLVVNKSIPPINPLENERAHMFVYNNIFFSFSLDTRDTYAECGGDRAARAAANNDLRGVKLFNLVDVE-----GISTINTAIIDYRGHRVIAQSLVPGILS 538
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: UPI0006451B33 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451B33) HSP 1 Score: 107 bits (266), Expect = 1.960e-24 Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 1 QSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAFHPQLSIKTLATAVVDFGGRRLIAQSLVPGILN 375
+ + R RA +++ CDF DAA GA + +PP NPTE E H+FV+NNIFFS+A D+ + Y + GD AR +A+ DL V NL+ I T+ TA++D+ G R++AQSLVPGIL+
Sbjct: 459 ERILRDRAFYRVNCDFVDAAIRGAKVVVGKSVPPINPTEEERMHMFVYNNIFFSFALDTRNFYSSCGGDRGARAAANNDLKGVKLFNLVDVD-----GISTICTAIIDYRGHRILAQSLVPGILS 578
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: A0A7S2S3S6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3S6_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.870e-24 Identity = 63/147 (42.86%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 1 QSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEA--------------------FHPQLSIKTLATAVVDF--GGRRLIAQSLVPGILN 375
+ + R++ ++K DFQ+AAT GA AI+ G + P NPTE +HV+VFNN+FFSYA DS D YK GD AA KSA DL ++ ++ L A P + TLAT +VD GRR++AQS+VPGIL
Sbjct: 610 EKVQRAKLVYKTWLDFQEAATQGASAIAAGHVTPINPTEPSRNHVYVFNNMFFSYAVDSKDGYKVFKGDEAAAKSARHDLRNISLIDRLQRAAVEPPSDQPEDAAEVSPPAVVPPGHRLCTLATTLVDLPCAGRRIVAQSIVPGILQ 756
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: A0A8K1FBK8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBK8_PYTOL) HSP 1 Score: 104 bits (259), Expect = 1.720e-23 Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 13 RSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAFHPQLSIKTLATAVVDFGGRRLIAQSLVPGILN 375
RSR ++K++ +F DAAT GAVAI +G IPP NP + +HV+VFNNIFFS + D + K V G+ AA SA++DL V A N EA + TLATAV+D+ G R+IAQS++PGIL
Sbjct: 413 RSRVMYKIVNEFVDAATQGAVAIVEGHIPPINPMDDASAHVYVFNNIFFSLSVDGKPSAKDVVGEEAAFSSANRDLQGVKAFN---EA--DINGLHTLATAVIDYLGTRVIAQSVIPGILQ 528
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: UPI0009E49C54 (clustered mitochondria protein homolog n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E49C54) HSP 1 Score: 103 bits (256), Expect = 4.370e-23 Identity = 59/125 (47.20%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 1 QSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAFHPQLSIKTLATAVVDFGGRRLIAQSLVPGILN 375
Q + R RA+ K+ DF AAT GAVA+ DG + NP E E +F++NNIFFSYA DS D ++ V GD AA +A DL V+A N L + TL+T +VD+ G R+IAQS++PGIL
Sbjct: 522 QRLLRDRAIFKITSDFVSAATRGAVAVIDGNVMAINPGEDEKKRMFIWNNIFFSYAFDSRDHFQGVGGDEAAYAAAGGDLRGVMAYNRLDTQ-----GLFTLSTVIVDYRGYRVIAQSIIPGILQ 641
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Match: A0A7M5XPM8_9CNID (Clu domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XPM8_9CNID) HSP 1 Score: 102 bits (255), Expect = 5.870e-23 Identity = 60/125 (48.00%), Postives = 76/125 (60.80%), Query Frame = 1
Query: 1 QSMTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFFSYAADSPDAYKAVSGDSAARKSASQDLASVVALNLLGEAFHPQLSIKTLATAVVDFGGRRLIAQSLVPGILN 375
Q R RAL+K+ CDF AAT GAVA+ DG + NP E E ++++NNIFFS+A DS D Y+ GD AA +AS DL V N L + TL T VVD+ G R+IAQS++PGIL
Sbjct: 87 QRTLRDRALYKITCDFIAAATRGAVAVVDGNVMAINPGEEEKMRMYIWNNIFFSFACDSRDHYQKYGGDEAAYTAASLDLKGVELYNKLDVE-----GLYTLGTVVVDYRGYRIIAQSIIPGILQ 206 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13306.2484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13306.2484.1 >prot_E-fasciculatus_F_contig13306.2484.1 ID=prot_E-fasciculatus_F_contig13306.2484.1|Name=mRNA_E-fasciculatus_F_contig13306.2484.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=123bp MTRSRALHKLLCDFQDAATAGAVAISDGFIPPANPTEAEHSHVFVFNNIFback to top mRNA from alignment at E-fasciculatus_F_contig13306:1707..2927+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13306.2484.1 ID=mRNA_E-fasciculatus_F_contig13306.2484.1|Name=mRNA_E-fasciculatus_F_contig13306.2484.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1221bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13306:1707..2927+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13306:1707..2927+ >mRNA_E-fasciculatus_F_contig13306.2484.1 ID=mRNA_E-fasciculatus_F_contig13306.2484.1|Name=mRNA_E-fasciculatus_F_contig13306.2484.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=738bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13306:1707..2927+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |