mRNA_E-fasciculatus_F_contig13238.2442.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13238.2442.1
Unique NamemRNA_E-fasciculatus_F_contig13238.2442.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: A0A6H5J907_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J907_9PHAE)

HSP 1 Score: 1185 bits (3066), Expect = 0.000e+0
Identity = 652/715 (91.19%), Postives = 664/715 (92.87%), Query Frame = 1
Query:    1 YGKSNPKRGQESLGKALQRRRAQERAAADSASSYDVDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNT 2145
            +GKSNPKRGQESLGKALQRRRAQERAAA SASSYDVDGSKARGKMTSVLEASNLDDFI+SAMMSERAFESHKENTVV+GPDGLEMSLDENGEI+AAAGSGKD G DEFDFEHMNIPRRP WAAGMTAEDLDYQERKSFLEWRRGIANAEEKNG+MKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREI PPKPTVVVVNKADYLSRAQQREWARHF+G G+ VLFFSARQQQEQLNREAREERDIAEGGLG+G PA DAYDSE      XX                V  SDA SAA       G AKKGHAGGGEGA SSAG RGSGT V KGDKSL+VLSRLEMCVELERLARTLG+PDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGD RDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADL  EAI RFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASL+QPENIDLMAEVLEKRA VAAREAELGLTVGAGG+GGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNT
Sbjct:    3 HGKSNPKRGQESLGKALQRRRAQERAAAASASSYDVDGSKARGKMTSVLEASNLDDFISSAMMSERAFESHKENTVVLGPDGLEMSLDENGEIDAAAGSGKDPGTDEFDFEHMNIPRRPAWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGITVLFFSARQQQEQLNREAREERDIAEGGLGSGPPASDAYDSEDGEDDTXXDFEADTEGDGEEEEE-VALSDAPSAA-------GAAKKGHAGGGEGATSSAGRRGSGTDVGKGDKSLQVLSRLEMCVELERLARTLGTPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDVRDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLKQPENIDLMAEVLEKRAAVAAREAELGLTVGAGGRGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNT 709          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: A0A835YPB7_9STRA (Lsg1, cytoplasmic GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB7_9STRA)

HSP 1 Score: 524 bits (1350), Expect = 1.450e-173
Identity = 365/727 (50.21%), Postives = 450/727 (61.90%), Query Frame = 1
Query:   34 SLGKALQRRRAQERAAADSASSYDVDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV-GPDGLEMSLD--------ENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGD------KSLRVLSRLEMCVELERLARTLGSPDPSRNG----GRACVGMVGFPNVGKSSLINVMVGATPLSHGGV-RVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAML----------------SPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEA-IARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKK 2103
            SLGKALQRR+AQ+ A   + + +DVDGS  RGK  SVLEA++L+DFIASAM+SER FESHK +TV++ G  G ++ +D        E  E  AAA          F FE M +PRRP W AGM+AEDLD  E+ +F+EWRR IA  EE+   +KVTPFEKN+EVWRQLWRV+E+SDLV Q+VDARNPLFYYS DL AYARE+ PPKP +++VNK+DYL+ AQ+REWA HF   G   LFFSAR  Q +LNREAR  R + E      A A DA D+ XXXXXXXXXXXXXXXXXXXXXXXX           A     G ++   +GG                 S  +      +  RVLSR E+   +E LAR+LG+   +R+     GRACVGMVG+PNVGKSS+IN + GATP SHG   RVSVGATPGKTKHFQTL LS SL+LCDCPGLVFPSFVSS AEMICAGVLPIMQMR+ + P+AL+ARR+PRHILE+TYTI                                  +  ++L ++C++RGL+R   LG+ D+PRAAR +LKD+T+G LLFCHPP DL+  A +A FL+ET++T L + +LAAK                 A  ++ A      E   +  E L  R  + AR  E+     A   G   TK E G  RWGKK +K  +  PY N   E  A+    GA V  GGKK
Sbjct:   12 SLGKALQRRQAQQLAEKRANARFDVDGSVTRGKYVSVLEANSLEDFIASAMLSEREFESHKAHTVILDGATGEKLRIDADDTHVAVETDETAAAAAH-------VFGFEQMGVPRRPPWDAGMSAEDLDKAEKTAFIEWRREIARLEEEKAGLKVTPFEKNIEVWRQLWRVLEKSDLVVQIVDARNPLFYYSRDLLAYARELDPPKPVIILVNKSDYLTAAQRREWAAHFMRQGWQGLFFSARAAQVKLNREARIARGL-EMATADDAAAEDA-DAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAPELQDGASETAGSGGSXXXXXXXXXXXXXXDESNSEFEREVARRARVLSREELLHVIEHLARSLGAASAARSAERHHGRACVGMVGYPNVGKSSVINALAGATPFSHGATARVSVGATPGKTKHFQTLALSPSLLLCDCPGLVFPSFVSSAAEMICAGVLPIMQMRDALAPIALVARRVPRHILELTYTIXXXXXXXXXXXXXXXXXXXXXXXXXXXALATRPPTATEVLTAFCESRGLYRPGGLGDYDLPRAARMLLKDYTEGTLLFCHPPPDLSDAAAVAAFLRETERTHLSSGRLAAKLAEQQRK----------AYGASSAQQQGGGEGGVVDGEALTAR--LKARADEIRAREAAAMDG--PTKVEQGFKRWGKKSKKYRDPTPYAN--WEGGAAAAARGASVQRGGKK 713          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: A0A4D9D3A0_9STRA (G domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3A0_9STRA)

HSP 1 Score: 367 bits (941), Expect = 3.860e-113
Identity = 292/713 (40.95%), Postives = 386/713 (54.14%), Query Frame = 1
Query:   37 LGKALQRRRAQERAAADSASSYD-VDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV--GPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEM-KVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREER----DIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSP------DPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGD-------ARDTAGNAM--LSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKET-DKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKK 2103
            +G+AL R+  Q+  AA  A     +DG K   +++SVLE ++LDDF+ +AMM++R F + KE  ++V     G   S+   G++   A    D G   F F  + +PRRP W  GM+A  LD  E+ SFLEWRR IA  EE +GE  +VTPFEKNLEVWRQLWRV+ERS ++ Q+VDAR+PLFYYS DL AYA E+ P +  +V+VNKADYL+ AQ+ EWA +F+  G    FFSAR+ QE L  +AREER    +  +G               XXXXXXXXXXXXXXXXXXXXXXXX G +   SA      S G  ++                      S+      +L+R E+   L+ LA  +G        +     G+A VGMVGFPNVGKSS+INV++G TPL H  VRV+V +TPGKTKHFQTL L    MLCDCPGLVFPSFV++TA+M+CAGVLPI Q+R  M P+ L+ RR+P  +L   Y +K     G+       A+++ G++    + +  L   C ARG +  +  G +D+ RAAR +L+D+ +GRL++ HPP  L  E    F   T  +   K   L+                                                        LTVG G + GK+  R     RWGKK +K+ NK PY   D E     G VG R  GGG +
Sbjct:   15 VGRALMRKHQQQGPAAVGAHEQQRLDGCK---QLSSVLEMNSLDDFLDTAMMAQRDFSAIKERDLLVLDAKTGGLTSILPRGQVTPGA----DKGMTTFAFRQLKVPRRPKWHTGMSAAALDRAEKASFLEWRREIAQLEETSGERARVTPFEKNLEVWRQLWRVLERSHVIVQIVDARDPLFYYSEDLHAYAAEMHPARERLVLVNKADYLTPAQRGEWATYFQKRGWNHAFFSARRAQELLTLQAREERLKELEGRDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAGGPSAPVKVSCSRGEKEE-------------------EPESRTTIFPPILTRTELIARLKGLAARVGGAFAAAALEAGHAAGKATVGMVGFPNVGKSSVINVLMGVTPLEHDRVRVAVSSTPGKTKHFQTLPLDPETMLCDCPGLVFPSFVATTADMVCAGVLPINQLREHMAPVELLCRRLPGPLLRRAYGLKERAKDGEETPAWASAKESGGSSSGCETARTFLGDLCGARGYW-TQGSGVADVNRAARMVLRDYVEGRLVYSHPPPGLTAEEGRVFEAATRGRGGGKGPALSEGLRRLALGEGRDKEEGGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELTVGEGSRSGKVRVRPT--KRWGKKGKKLRNKTPY--EDTE-----GGVGGRAPGGGAR 691          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: D0NWZ7_PHYIT (Large subunit GTPase 1 n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NWZ7_PHYIT)

HSP 1 Score: 363 bits (931), Expect = 5.420e-113
Identity = 253/683 (37.04%), Postives = 353/683 (51.68%), Query Frame = 1
Query:  109 DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV-----GPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAI--------ARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQP---ENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKK 2103
            DG  A   + S LE S+LDDF+ASA+++ R F + KE+ +++     GP  +E   +   E+                F  M +PRRP W   MTAE+L+  E++SFLEWRR IA  E  +  ++VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDL+AYA+E   P+ T++VVNK+D+L   Q+  W  HF+   +  +FFSA++ Q++++ EA++ R          A + D Y+                          V  +DA    EA                                ++      VLSR+E+   + ++A  +      R   +  +  GMVGFPNVGKSS+IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM C GVLP+ Q+R+ + P  L+  RIPR + E TY IK+P+    A++T    + +   LLESY + RG +     G  D  RAAR IL+ + +GRLL+CHPP D++   I        A+F    D   L TT+                        S E  S  +P   +N+D    V +KRAV                     +KR   L + G+K RK  +K+PY + D    A+    G R+  GGKK
Sbjct:   44 DGGDASVALASYLEGSSLDDFLASAVLANREFTAVKESIMLMEEADAGPQVVEKDKNVMPEMT---------------FAEMKVPRRPQWDKSMTAEELNRMEKESFLEWRRDIAILEASSDHLEVTPFEKNLEVWRQLWHVRERSDIMVQIVDARNPLFYRSTDLDAYAKEGETPRRTLLVVNKSDFLDERQRTAWGDHFKKENINFVFFSAKEAQDEIDEEAKKLRQEQRN-----AESHDQYNE-------------------------VKPADAPQVVEAEAVD---------------------------ATEDSSPYSVLSRVELLDYVTKIATEVLDEVGVRVKDKGLIKFGMVGFPNVGKSSVINALLGASTYSHKTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMYCCGVLPLSQLRDHVSPCQLLCHRIPRRVFERTYGIKIPI-SKTAKETDSVGIYA---LLESYARNRG-YTTTGKGGPDTSRAARDILRHYVNGRLLYCHPPPDVSDSTIFDIHDLAKAQFPDLDDSIVLHTTENEI---------------------SEEVTSPPEPNVDKNLDFDTTVEDKRAV---------------------SKR---LKKHGRKGRKGRDKNPYEDSDFPGGAA----GVRINSGGKK 600          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: A0A1V9ZAV8_9STRA (Large subunit GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAV8_9STRA)

HSP 1 Score: 361 bits (927), Expect = 2.890e-112
Identity = 257/586 (43.86%), Postives = 335/586 (57.17%), Query Frame = 1
Query:   34 SLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGL----EMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVEL----ERLARTLGSPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLA 1758
            SLGKAL +   ++     S++   V   DG  +   + S LE S+LDDF+A+A M+ R F + KE  +V+  +GL    ++ LD+                 E DF  M IPRRP W    TA +L+ +ER+SFL+WRR IA  E  + + +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+DYL+  Q+  WA +F+  G+  +FFSA++ Q +L+ E +  +++               D E   XXXXXXXXXXXXXXXXX        DA  AA A                                 + D    VL+R E+   L    ER+   +G     +  G    GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   + T     +    LLE Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP  +AP   A    E  KT     K+A
Sbjct:   10 SLGKALMKSNVKKAKELQSSAGKHVSATDGGDSTVALASYLEGSSLDDFLANATMANREFVAEKERVMVLEANGLPTLAKVDLDKV---------------PEMDFSEMKIPRRPSWDKTTTAAELNLKERQSFLDWRRDIAMLEAASEDREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSVDLERYVKEVDEAKDVMLIVNKSDYLTPEQRIIWADYFKANGIDFVFFSAKEAQAKLDAEYKASKELL------------LSDDEGEEXXXXXXXXXXXXXXXXX------EKDAGEAAPAP------------------------------TERAD--CVVLTREELLAYLNGRAERVTARVGLRAEDK--GLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRLVFESTYGIKVP-FPNSGKYTDP---VDVYVLLEVYARARG-FATAGKGGPDQSRAARVLLRDYVMGRLLYCHPPPGVAPTTPAFDPLELAKTFATADKVA 523          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: A0A067CCU5_SAPPC (G domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCU5_SAPPC)

HSP 1 Score: 359 bits (922), Expect = 1.780e-111
Identity = 246/575 (42.78%), Postives = 323/575 (56.17%), Query Frame = 1
Query:   34 SLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGL----EMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDK 1731
            SLGKAL +   ++     S++   V   DG  +   + S LE S+LDDF+A+A M+ R F + KE  +V+  +GL    ++ LD+                 E DF  M IPRRPGW +  TA +L+ +ER+SFL WRR IA  E  + E  VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  ++++NK+DYL+  Q+  WA +F+   +  +FFSA++ QE+L+ E +  +D +              D E     XXXXXXXXXXXXX      V  +   S                                   V    +   VL+R E+   L   A  +      R   +  V  GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   +    N  +    LL+ Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP   +P   A  + E  K
Sbjct:   10 SLGKALMKTNVKKAKELQSSAGKHVSATDGGDSTVALASYLEGSSLDDFLANATMANREFVAEKERVMVLEANGLPTLAKVDLDKV---------------PEMDFSEMKIPRRPGWDSTTTAAELNMRERESFLNWRRDIAMLEAASEERDVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSVDLERYVKEVNSAKDCMLIINKSDYLTPEQRLIWADYFKANAIDFVFFSAKEAQEKLDAEYKASKDFS------------LSDDEGELDDXXXXXXXXXXXXXTKPAPIVAETPKQS-----------------------------------VPAEREDCVVLTREELLEYLSGRADKVVERVGLRADDKGLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRLVFESTYGIKIP-FPNSGKY---NDPVDVYTLLDVYARARG-FATAGKGGPDQSRAARVLLRDYVIGRLLYCHPPPGTSPREPAFDVMELAK 517          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: A0A1W0A241_9STRA (Large subunit GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A241_9STRA)

HSP 1 Score: 357 bits (916), Expect = 1.580e-110
Identity = 249/559 (44.54%), Postives = 324/559 (57.96%), Query Frame = 1
Query:   34 SLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAP 1695
            SLGKAL R   ++     S++   V   DG  +   + S LE S+LDDF+A+A ++ R F + KE  +V+  +G+           A     K     E DF  M IPRRP W +  TA +L+ +ER+SFL WRR IA  E+   E +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+DYL+  Q+  WA +F+   +  +FFSA++ QE+L+ E +  RDI                S+    XXXXXXXXXXXXXXXXXX  +   +A    E  +                              S   +   VL+R E+    +  A  +      R   +  V  GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   R    N  +    LLE Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP  ++P
Sbjct:   10 SLGKALMRTNVKKAKELQSSAGKHVSATDGGDSTVALASYLEGSSLDDFLANATLANREFIAEKERVMVLEANGMPTL--------AKLDMSKVP---EMDFSEMKIPRRPSWDSTTTAAELNMRERESFLNWRRDIAMLEQATEEREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSIDLERYVKEVDAAKDVMLIVNKSDYLTPEQRVMWADYFKANKIDFVFFSAKEAQEKLDAEYKASRDIIV--------------SDEEDNXXXXXXXXXXXXXXXXXXNEIVSKEAPKVVEEIKP----------------------------ASSEREDCIVLTREELLEYFDGRADQVVKRVGLRADDKGLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKVP-FPNSGRY---NDPVDVYVLLEVYARARG-FATAGKGGPDQSRAARVLLRDYVMGRLLYCHPPPGVSP 510          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: A0A485KVN8_9STRA (Aste57867_12475 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVN8_9STRA)

HSP 1 Score: 355 bits (910), Expect = 8.700e-110
Identity = 244/563 (43.34%), Postives = 329/563 (58.44%), Query Frame = 1
Query:   34 SLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIA 1707
            SLGKAL +  ++      S++   V   DG  A  ++ S LE S+LDDF+A+A ++ R F + KE  VV         L+ +G    A          E DF+ M +PRRP W    TA++L+ +ER+SFL WRR +A  E+ + +  VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY STDLE Y +E+   K  +++VNK+D+L+ AQ+  WA +F    +  +FFSA++ QE L+ E ++                   + E      XXXXXXXXXXXXXXX   V   +   AA                                 V + D   +VLSR ++   +E  ++ + +    R   +  +  GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTLVLSD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+PV P   +    N  +    +LE Y +ARG F     G  D  RAARQ+L+D+ +G+LL+CHPP  ++P   A
Sbjct:   10 SLGKALAKTSSKSVKEIQSSAGKHVAVADGGDATVQLASYLEGSSLDDFLANATLANREFVAEKERIVV---------LEAHGTPTLAKFDPSKL--PEMDFKEMKVPRRPHWDETTTAQELNLRERESFLSWRRDLALLEQSSEDRDVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSTDLEKYVKEVDEKKEVMLIVNKSDFLTPAQRVAWADYFASEKIDYVFFSAKEAQELLDAEYKQAN----------------VNVELSEDEEXXXXXXXXXXXXXXXPKDVAVEEKQPAA-------------------------------ADVERAD--CKVLSREDLLEYMENRSKDVLARVGLRAEDKGLIKFGMVGFPNVGKSSAINALLGASNYAHHAQRVAVGATPGKTKHFQTLVLSDAIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKVPV-PNTGKY---NDDVDVYSVLEVYARARG-FTTTGKGGPDTSRAARQLLRDYVNGKLLYCHPPPGVSPTTAA 507          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: A0A024TX60_9STRA (CP-type G domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX60_9STRA)

HSP 1 Score: 353 bits (907), Expect = 2.550e-109
Identity = 231/531 (43.50%), Postives = 306/531 (57.63%), Query Frame = 1
Query:  106 VDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV----GPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSR--NGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPP 1680
             DG  A  ++ S LE S+LDDF+A+A ++ R F + KE  VV+    GP      L     +N               F  M +PRRP W A  T  +L+ +ER+SFL WRR IA  E  +G  +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+D+L+ AQ+  WA +F    V  +FFSA++ QE L+ E ++     E           + D E XXXXXXXX                   D ++       ++  A   HA                  V +     +VL+RL++   +ER A+ +      R  + GR   GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTL LSD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+PV P   +    N  ++   +LE Y +ARG F        D  RAAR +L+D+ +G+LL+CHPP
Sbjct:   38 ADGGDATAQLASYLEGSSLDDFLANATLANREFVAEKERIVVLESRGGPTLATTDLSSLPSMN---------------FTEMKVPRRPHWDATTTPAELNLRERESFLNWRRDIAILEAADGAREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSLDLERYVKEVDANKQVMLIVNKSDFLTAAQRLAWADYFASQNVDFVFFSAKEAQELLDAEYKKSTMTLEL----------SEDEESXXXXXXXX-------------------DENAEEVTPAITATTAVPTHA------------------VDEERADCKVLTRLDLLEYMERRAKAVVGKVGLRAEDRGRVKFGMVGFPNVGKSSAINALLGASNFAHHAQRVAVGATPGKTKHFQTLALSDTIMLCDCPGLVFPSFVNSKAEMLCCGVLPIAQLRDHVPPCELVARRIPRVVFEETYGIKVPV-PNTGKY---NDPVNVYTVLEVYARARG-FTTTGKSGPDTSRAARVLLRDYVNGKLLYCHPP 501          
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Match: G4YIC6_PHYSP (G domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YIC6_PHYSP)

HSP 1 Score: 352 bits (903), Expect = 8.190e-109
Identity = 255/692 (36.85%), Postives = 354/692 (51.16%), Query Frame = 1
Query:  109 DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV-----GPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQLNREAREERDIAEGGLGAGAPAPDAYDSEXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKS-LRVLSRLEMCVELERLA-RTLGSPDPS-RNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPA-------------------DLAPEAIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKK 2103
            DG  A   + S LE S+LDDF+ASA+++ R F + KE+ V++     GP  +E       E+                F  M +PRRP W    TAE+L+  E++SFLEWRR IA  E  +  ++VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDL+AYA+E   P+ T+++VNK+D+LS  Q+  W  HF+   +  +FFSA++ Q++++ EA++ R  A       A + D YD                             +DA S                       + SA         +K ++S   VLSR+E+   + ++A   LG      ++ G    GMVGFPNVGKSS+IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM C GVLP+ Q+R+ + P  L+  RIP+ + E TY IK+P     A++T    + +   LLESY + RG +     G  D  RAAR IL+ + +GRLL+CHPP                    D+A  A+    ++ +  A   TK AA                    A AE              EVLE    V  ++A              ++KR   L + G+K RK  +K+PY + D+    S    G  +  GGKK
Sbjct:   44 DGGDASVALASYLEGSSLDDFLASAVLANREFTAVKESIVLMEEADAGPQLIEREKHVMPEMT---------------FAEMKVPRRPQWTTSTTAEELNRLEKESFLEWRRDIALLEASSDHLEVTPFEKNLEVWRQLWHVRERSDIMVQIVDARNPLFYRSTDLDAYAKEGETPRRTLLIVNKSDFLSEGQRTAWGEHFKAENIDYVFFSAKEAQDEIDEEAKKLRQEARN-----AESHDEYDEAKP-------------------------ADAPSQV--------------------VDDSA--------PTKEERSPYPVLSRIELLEYVTKIATEVLGEVGVRVKDKGLIKFGMVGFPNVGKSSVINALLGASTYSHKTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMYCCGVLPLSQLRDHISPCQLLCHRIPKRVFERTYGIKIPT-SKTAKETDPVGIYA---LLESYARNRG-YTTTGKGGPDTSRAARDILRHYVNGRLLYCHPPPNVSDPNIFDIHVLAKAQFPDIAEPAVPEITEDDNANANDETKAAAD-------------------ADAE--------------EVLEFDTTVEDKQA--------------VSKR---LKKHGRKGRKGRDKNPYEDSDLPGGFS----GVHINSGGKK 603          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13238.2442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J907_9PHAE0.000e+091.19G domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A835YPB7_9STRA1.450e-17350.21Lsg1, cytoplasmic GTPase n=1 Tax=Tribonema minus T... [more]
A0A4D9D3A0_9STRA3.860e-11340.95G domain-containing protein n=2 Tax=Nannochloropsi... [more]
D0NWZ7_PHYIT5.420e-11337.04Large subunit GTPase 1 n=3 Tax=Phytophthora infest... [more]
A0A1V9ZAV8_9STRA2.890e-11243.86Large subunit GTPase 1 n=1 Tax=Achlya hypogyna Tax... [more]
A0A067CCU5_SAPPC1.780e-11142.78G domain-containing protein n=2 Tax=Saprolegnia Ta... [more]
A0A1W0A241_9STRA1.580e-11044.54Large subunit GTPase 1 n=1 Tax=Thraustotheca clava... [more]
A0A485KVN8_9STRA8.700e-11043.34Aste57867_12475 protein n=1 Tax=Aphanomyces stella... [more]
A0A024TX60_9STRA2.550e-10943.50CP-type G domain-containing protein n=1 Tax=Aphano... [more]
G4YIC6_PHYSP8.190e-10936.85G domain-containing protein n=6 Tax=Phytophthora T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13238contigE-fasciculatus_F_contig13238:2..3705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1183.3
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G7R6
KEGG koko:K14539
KEGG Pathwayko03008,map03008
GOsGO:0000003,GO:0000054,GO:0000166,GO:0001882,GO:0001883,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006405,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009790,GO:0009791,GO:0009793,GO:0009966,GO:0009987,GO:0010154,GO:0010467,GO:0010646,GO:0010817,GO:0012505,GO:0015030,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016072,GO:0016462,GO:0016604,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022414,GO:0022613,GO:0023051,GO:0031503,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0033036,GO:0033750,GO:0034470,GO:0034613,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042254,GO:0042886,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045184,GO:0046483,GO:0046626,GO:0046907,GO:0048316,GO:0048366,GO:0048367,GO:0048518,GO:0048583,GO:0048608,GO:0048731,GO:0048825,GO:0048827,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051049,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0090069,GO:0090070,GO:0090304,GO:0097159,GO:0097367,GO:0099402,GO:1900076,GO:1901265,GO:1901360,GO:1901363,GO:2000012
EggNOG free text desc.Large subunit GTPase 1
EggNOG OGsCOG1161@1,KOG1424@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLsg1, cytoplasmic GTPase involved in the ribosome assembly
Ec32 orthologEc-06_000630.1
Exons5
Model size2145
Cds size2145
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13238.2442.1prot_E-fasciculatus_F_contig13238.2442.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13238 2..3705 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927827.1562228-CDS-E-fasciculatus_F_contig13238:1..901622927827.1562228-CDS-E-fasciculatus_F_contig13238:1..90Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 2..90 +
1695995711.7046006-CDS-E-fasciculatus_F_contig13238:1..901695995711.7046006-CDS-E-fasciculatus_F_contig13238:1..90Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 2..90 +
1622927827.1710796-CDS-E-fasciculatus_F_contig13238:498..8491622927827.1710796-CDS-E-fasciculatus_F_contig13238:498..849Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 499..849 +
1695995711.7311108-CDS-E-fasciculatus_F_contig13238:498..8491695995711.7311108-CDS-E-fasciculatus_F_contig13238:498..849Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 499..849 +
1622927827.1878884-CDS-E-fasciculatus_F_contig13238:1327..22481622927827.1878884-CDS-E-fasciculatus_F_contig13238:1327..2248Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 1328..2248 +
1695995711.7414663-CDS-E-fasciculatus_F_contig13238:1327..22481695995711.7414663-CDS-E-fasciculatus_F_contig13238:1327..2248Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 1328..2248 +
1622927827.2020857-CDS-E-fasciculatus_F_contig13238:2403..27401622927827.2020857-CDS-E-fasciculatus_F_contig13238:2403..2740Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 2404..2740 +
1695995711.7500393-CDS-E-fasciculatus_F_contig13238:2403..27401695995711.7500393-CDS-E-fasciculatus_F_contig13238:2403..2740Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 2404..2740 +
1622927827.2152627-CDS-E-fasciculatus_F_contig13238:3258..37051622927827.2152627-CDS-E-fasciculatus_F_contig13238:3258..3705Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 3259..3705 +
1695995711.7593982-CDS-E-fasciculatus_F_contig13238:3258..37051695995711.7593982-CDS-E-fasciculatus_F_contig13238:3258..3705Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13238 3259..3705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13238.2442.1

>prot_E-fasciculatus_F_contig13238.2442.1 ID=prot_E-fasciculatus_F_contig13238.2442.1|Name=mRNA_E-fasciculatus_F_contig13238.2442.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=715bp
YGKSNPKRGQESLGKALQRRRAQERAAADSASSYDVDGSKARGKMTSVLE
ASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAGSG
KDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEE
KNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAY
AREIAPPKPTVVVVNKADYLSRAQQREWARHFRGLGVAVLFFSARQQQEQ
LNREAREERDIAEGGLGAGAPAPDAYDSEDGDDDTDDDFEADTEGDGEEE
EDEVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKG
DKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACVGMVGFPNVGKSSL
INVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPS
FVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLP
GDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFT
DGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKLALQLSKAEAKA
SAGGAAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGK
GGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGK
KGRRGKKRDGFVRNT
back to top

mRNA from alignment at E-fasciculatus_F_contig13238:2..3705+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13238.2442.1 ID=mRNA_E-fasciculatus_F_contig13238.2442.1|Name=mRNA_E-fasciculatus_F_contig13238.2442.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3704bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13238:2..3705+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TATGGAAAAAGTAACCCGAAGCGGGGACAAGAGTCTCTTGGAAAAGCGCT CCAGCGACGCCGTGCGCAAGAGCGAGCTGCGGCTGACAGGTGTGTCAAAT CTGACCACAACAAGGTCAAGCCTATTTCATCAGCAGTGTTACAGGGCAGC GGACGGGCGCTGCCGTACAGACCTCGCCATTCTTGCTGACTATTCACGCT GCGCTTAGGCGCGTAGGGGAAACGACAAAGGCCTGTCGCTGGTCTCATCC GGCTTTGGTTAAGTGTTGGGTTGGGGGATAGGCGATTGTTTCGGTGCGCG TCTAGGCACCCACTACCCCTAGAGCAAGCAACCCACCGCTTCCGTTTCGA TATGTGGACCGGCTCTATTATGCGGGGCTCACGTAATACTGCTGGTAGAC ATCTCTTTACCCATGGTTGCTGTCCATATCCCACCATCTCTTCACTAACC ACGCTACCACCCCCGTACTTGCTGTGTGTCCACCCACGCGCAAACAGCGC GTCGTCGTACGATGTGGACGGCAGCAAGGCTCGCGGCAAGATGACCTCGG TGCTCGAGGCCAGCAACCTCGACGACTTCATCGCCTCCGCCATGATGTCG GAGCGAGCCTTCGAGTCCCACAAGGAGAACACGGTCGTGGTCGGGCCCGA CGGCTTGGAGATGAGCCTGGACGAGAACGGCGAGATCAACGCCGCCGCCG GGAGCGGGAAGGACGCCGGCAATGACGAGTTCGACTTCGAGCACATGAAC ATCCCGAGACGCCCGGGTTGGGCGGCGGGCATGACCGCCGAGGATCTAGA CTACCAGGAGAGGAAGTCTTTTCTCGAGTGGCGGAGAGGAATTGCAAAGT GAGCGCATATGTGCGGCAATCAATCTCATGTCCAGTCTAGCAGAGGCACC CGTCGCTGTCTTTGTTGTGTGTGTGGGTCGGCCTTGCTTGCCTCTCAGTG GATAGTATCGGTGTGATGAACAAACACATTTTGCGAGCTTTTTTCGCCTT TCGACAACATGCCGCCTTTCTGTTGGCGCTACAGCAGCAGCACGTCCCGA CCCATCGAGTTTGTACGGACGGGACCCGTACGATGGACGCAGCTCTCGCT TTGCTTTATGCAAATATTTGCCGAACGCAGCTCGTCTACCGATGCCCGTG AACGTGCCACCTGCTACGGTACACACACAAAGATGAGGGTCCTATTGATA AATTTGCATCCACCGCGGTTTGTTTGGGAGCAGGATAGTAGCGTGTCGCC CCGTTGCCACCGACGATGTACACGTGATTGATTTCGTTCTTCCCCCTCCG GACGCCACAACCACGCTCCGTTGCAGCGCCGAAGAGAAGAACGGTGAGAT GAAGGTCACGCCCTTCGAGAAGAACCTGGAGGTGTGGCGACAGCTTTGGC GCGTCATCGAACGGAGCGACCTCGTCTGCCAGCTGGTCGACGCCCGCAAC CCGCTCTTCTACTACTCCACCGACCTCGAGGCCTACGCGAGGGAGATCGC GCCGCCGAAGCCCACCGTGGTTGTGGTGAACAAGGCCGACTACCTGAGCC GAGCGCAGCAGAGGGAGTGGGCGCGGCACTTCCGGGGGCTAGGGGTCGCC GTGCTGTTTTTCTCGGCCCGACAGCAGCAAGAGCAGCTCAACCGGGAGGC CAGAGAAGAGAGGGATATTGCTGAGGGCGGACTGGGCGCAGGCGCTCCTG CCCCGGATGCCTATGACTCCGAGGACGGCGATGACGATACTGATGACGAT TTCGAGGCGGACACGGAGGGTGATGGGGAAGAGGAGGAAGATGAAGTTGG GCGATCGGATGCGTCTTCCGCTGCAGAGGCGGCGCGTTTCTCTTCGGGGG TGGCGAAGAAAGGCCATGCTGGCGGGGGGGAAGGCGCGAATTCTTCGGCA GGGGGCCGAGGGAGCGGGACCGGCGTAAGCAAGGGGGACAAGTCGCTGCG GGTGCTGAGCAGACTTGAAATGTGCGTCGAGCTCGAGCGGCTTGCGAGGA CTCTTGGGTCGCCGGACCCTTCGCGAAACGGCGGGCGGGCCTGCGTCGGA ATGGTCGGGTTCCCCAACGTGGGGAAGAGCAGCCTGATCAACGTGATGGT CGGGGCGACGCCGCTGTCGCACGGTGGTGTGCGGGTCAGCGTCGGTGCCA CCCCGGGCAAGACGAAGCACTTTCAGACGCTGGTGCTCAGCGACAGCCTC ATGCTGTGCGATTGTCCAGGTCTCGTGTTTCCAAGTTTCGTTAGCAGGTG AGCGCAGGCAGGTCGGTCGCCCGGTAAATACGAGTAGGCGTGCACCGTAC CAACGTTGTCGTGTTCTTTTGATGTCGGAAATACCTGCCCCCGTCGACCC ACCTTTCTTTTCCCCCATGCTGTGGTTTCCTGGGTCGGTGGCAACGCTAC AGCACGGCCGAAATGATTTGTGCTGGAGTGTTGCCCATCATGCAGATGCG GAACGTCATGCCCCCCATGGCCCTCATCGCGCGACGAATACCTCGACACA TCCTCGAGATCACCTACACCATCAAGCTCCCGGTCCTCCCGGGGGACGCC AGGGATACGGCGGGAAACGCCATGCTCTCGCCGCAGCAGCTCCTGGAGTC GTACTGCCAGGCAAGAGGACTGTTCCGCGCCCGCGCCCTCGGGGAGTCAG ACATGCCGCGCGCGGCGCGGCAGATCCTCAAGGACTTCACGGATGGACGG CTTTTGTTTTGCCATCCGCCTGCCGACCTGGCTCCAGAGGTGGGTAACTC GTATGTTTGCCGCGGTTGCTTCCCGAAGTATTTGTTAGAAATAAGCTGGA ATGATCTCTCCCCGGTGTTGTTTCGAGGCGCCTTGGTGGCCGCATGGGCC ATATGCGCGCGCGTGAGGTGACTAACCCTGCCGTGCGCACGTGGCCCCTA TTTGAAGGATATCAGGGACTAGCCTAGCCCTGCCGTGCGCCCGTCTTGGT TGTATGTACGATACTCCTATGATATATTAGCGGCTACCGACGACGGTTCA TCGCTAACCACCACCACCAATCTGCCGTGGGCACTTGTTCCACGTGCAGT ATGTATTGGGCTCGTTTGCCAAGTTTCCGCCCGCCGCCATTCCGAATGCC ACCCATTGCCTAAAGTAGTTGGGAAAATGGAACAGGTGGCCATATTAAAG TCCGGCCCTCTGTTGCCTATTTCCAGTTGTCCTTTCTCACGATATTGTTC GCGTTGCTCCGGTATATTTGATGACGTTTATGACGTTCTGCGCGCGAGGA AACGCAGGCCATCGCCCGGTTCCTCAAGGAGACCGACAAGACGGCTCTCA AGACCACTAAGCTCGCCGCCAAGCTCGCCTTGCAGCTCAGCAAGGCGGAG GCAAAGGCGAGCGCGGGGGGCGCGGCCGTCGCGTCCGCCGAAGCGGCGTC TCTCCAGCAGCCAGAAAACATTGACCTCATGGCAGAGGTTCTGGAGAAGA GGGCGGTGGTAGCGGCCCGCGAAGCCGAGCTAGGTCTTACGGTCGGCGCG GGTGGCAAGGGCGGGAAGCTGACCAAGAGAGAGATGGGGCTCCTGCGGTG GGGCAAGAAAGACCGAAAGGTCGGGAACAAGGACCCGTACGGCAACCCGG ACGTCGAGACCGCGGCGTCGCTCGGGCCGGTAGGGGCGAGGGTAGCGGGG GGGGGGAAGAAGGGGCGGAGGGGCAAGAAGAGGGACGGCTTTGTCCGGAA TACG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13238:2..3705+

>mRNA_E-fasciculatus_F_contig13238.2442.1 ID=mRNA_E-fasciculatus_F_contig13238.2442.1|Name=mRNA_E-fasciculatus_F_contig13238.2442.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4290bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13238:2..3705+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TATGGAAAAAGTAACCCGAAGCGGGGACAAGAGTCTCTTGGAAAAGCGCT
CCAGCGACGCCGTGCGCAAGAGCGAGCTGCGGCTGACAGTATGGAAAAAG
TAACCCGAAGCGGGGACAAGAGTCTCTTGGAAAAGCGCTCCAGCGACGCC
GTGCGCAAGAGCGAGCTGCGGCTGACAGCGCGTCGTCGTACGATGTGGAC
GGCAGCAAGGCTCGCGGCAAGATGACCTCGGTGCTCGAGGCCAGCAACCT
CGACGACTTCATCGCCTCCGCCATGATGTCGGAGCGAGCCTTCGAGTCCC
ACAAGGAGAACACGGTCGTGGTCGGGCCCGACGGCTTGGAGATGAGCCTG
GACGAGAACGGCGAGATCAACGCCGCCGCCGGGAGCGGGAAGGACGCCGG
CAATGACGAGTTCGACTTCGAGCACATGAACATCCCGAGACGCCCGGGTT
GGGCGGCGGGCATGACCGCCGAGGATCTAGACTACCAGGAGAGGAAGTCT
TTTCTCGAGTGGCGGAGAGGAATTGCAAACGCGTCGTCGTACGATGTGGA
CGGCAGCAAGGCTCGCGGCAAGATGACCTCGGTGCTCGAGGCCAGCAACC
TCGACGACTTCATCGCCTCCGCCATGATGTCGGAGCGAGCCTTCGAGTCC
CACAAGGAGAACACGGTCGTGGTCGGGCCCGACGGCTTGGAGATGAGCCT
GGACGAGAACGGCGAGATCAACGCCGCCGCCGGGAGCGGGAAGGACGCCG
GCAATGACGAGTTCGACTTCGAGCACATGAACATCCCGAGACGCCCGGGT
TGGGCGGCGGGCATGACCGCCGAGGATCTAGACTACCAGGAGAGGAAGTC
TTTTCTCGAGTGGCGGAGAGGAATTGCAAACGCCGAAGAGAAGAACGGTG
AGATGAAGGTCACGCCCTTCGAGAAGAACCTGGAGGTGTGGCGACAGCTT
TGGCGCGTCATCGAACGGAGCGACCTCGTCTGCCAGCTGGTCGACGCCCG
CAACCCGCTCTTCTACTACTCCACCGACCTCGAGGCCTACGCGAGGGAGA
TCGCGCCGCCGAAGCCCACCGTGGTTGTGGTGAACAAGGCCGACTACCTG
AGCCGAGCGCAGCAGAGGGAGTGGGCGCGGCACTTCCGGGGGCTAGGGGT
CGCCGTGCTGTTTTTCTCGGCCCGACAGCAGCAAGAGCAGCTCAACCGGG
AGGCCAGAGAAGAGAGGGATATTGCTGAGGGCGGACTGGGCGCAGGCGCT
CCTGCCCCGGATGCCTATGACTCCGAGGACGGCGATGACGATACTGATGA
CGATTTCGAGGCGGACACGGAGGGTGATGGGGAAGAGGAGGAAGATGAAG
TTGGGCGATCGGATGCGTCTTCCGCTGCAGAGGCGGCGCGTTTCTCTTCG
GGGGTGGCGAAGAAAGGCCATGCTGGCGGGGGGGAAGGCGCGAATTCTTC
GGCAGGGGGCCGAGGGAGCGGGACCGGCGTAAGCAAGGGGGACAAGTCGC
TGCGGGTGCTGAGCAGACTTGAAATGTGCGTCGAGCTCGAGCGGCTTGCG
AGGACTCTTGGGTCGCCGGACCCTTCGCGAAACGGCGGGCGGGCCTGCGT
CGGAATGGTCGGGTTCCCCAACGTGGGGAAGAGCAGCCTGATCAACGTGA
TGGTCGGGGCGACGCCGCTGTCGCACGGTGGTGTGCGGGTCAGCGTCGGT
GCCACCCCGGGCAAGACGAAGCACTTTCAGACGCTGGTGCTCAGCGACAG
CCTCATGCTGTGCGATTGTCCAGGTCTCGTGTTTCCAAGTTTCGTTAGCA
GCGCCGAAGAGAAGAACGGTGAGATGAAGGTCACGCCCTTCGAGAAGAAC
CTGGAGGTGTGGCGACAGCTTTGGCGCGTCATCGAACGGAGCGACCTCGT
CTGCCAGCTGGTCGACGCCCGCAACCCGCTCTTCTACTACTCCACCGACC
TCGAGGCCTACGCGAGGGAGATCGCGCCGCCGAAGCCCACCGTGGTTGTG
GTGAACAAGGCCGACTACCTGAGCCGAGCGCAGCAGAGGGAGTGGGCGCG
GCACTTCCGGGGGCTAGGGGTCGCCGTGCTGTTTTTCTCGGCCCGACAGC
AGCAAGAGCAGCTCAACCGGGAGGCCAGAGAAGAGAGGGATATTGCTGAG
GGCGGACTGGGCGCAGGCGCTCCTGCCCCGGATGCCTATGACTCCGAGGA
CGGCGATGACGATACTGATGACGATTTCGAGGCGGACACGGAGGGTGATG
GGGAAGAGGAGGAAGATGAAGTTGGGCGATCGGATGCGTCTTCCGCTGCA
GAGGCGGCGCGTTTCTCTTCGGGGGTGGCGAAGAAAGGCCATGCTGGCGG
GGGGGAAGGCGCGAATTCTTCGGCAGGGGGCCGAGGGAGCGGGACCGGCG
TAAGCAAGGGGGACAAGTCGCTGCGGGTGCTGAGCAGACTTGAAATGTGC
GTCGAGCTCGAGCGGCTTGCGAGGACTCTTGGGTCGCCGGACCCTTCGCG
AAACGGCGGGCGGGCCTGCGTCGGAATGGTCGGGTTCCCCAACGTGGGGA
AGAGCAGCCTGATCAACGTGATGGTCGGGGCGACGCCGCTGTCGCACGGT
GGTGTGCGGGTCAGCGTCGGTGCCACCCCGGGCAAGACGAAGCACTTTCA
GACGCTGGTGCTCAGCGACAGCCTCATGCTGTGCGATTGTCCAGGTCTCG
TGTTTCCAAGTTTCGTTAGCAGCACGGCCGAAATGATTTGTGCTGGAGTG
TTGCCCATCATGCAGATGCGGAACGTCATGCCCCCCATGGCCCTCATCGC
GCGACGAATACCTCGACACATCCTCGAGATCACCTACACCATCAAGCTCC
CGGTCCTCCCGGGGGACGCCAGGGATACGGCGGGAAACGCCATGCTCTCG
CCGCAGCAGCTCCTGGAGTCGTACTGCCAGGCAAGAGGACTGTTCCGCGC
CCGCGCCCTCGGGGAGTCAGACATGCCGCGCGCGGCGCGGCAGATCCTCA
AGGACTTCACGGATGGACGGCTTTTGTTTTGCCATCCGCCTGCCGACCTG
GCTCCAGAGCACGGCCGAAATGATTTGTGCTGGAGTGTTGCCCATCATGC
AGATGCGGAACGTCATGCCCCCCATGGCCCTCATCGCGCGACGAATACCT
CGACACATCCTCGAGATCACCTACACCATCAAGCTCCCGGTCCTCCCGGG
GGACGCCAGGGATACGGCGGGAAACGCCATGCTCTCGCCGCAGCAGCTCC
TGGAGTCGTACTGCCAGGCAAGAGGACTGTTCCGCGCCCGCGCCCTCGGG
GAGTCAGACATGCCGCGCGCGGCGCGGCAGATCCTCAAGGACTTCACGGA
TGGACGGCTTTTGTTTTGCCATCCGCCTGCCGACCTGGCTCCAGAGGCCA
TCGCCCGGTTCCTCAAGGAGACCGACAAGACGGCTCTCAAGACCACTAAG
CTCGCCGCCAAGCTCGCCTTGCAGCTCAGCAAGGCGGAGGCAAAGGCGAG
CGCGGGGGGCGCGGCCGTCGCGTCCGCCGAAGCGGCGTCTCTCCAGCAGC
CAGAAAACATTGACCTCATGGCAGAGGTTCTGGAGAAGAGGGCGGTGGTA
GCGGCCCGCGAAGCCGAGCTAGGTCTTACGGTCGGCGCGGGTGGCAAGGG
CGGGAAGCTGACCAAGAGAGAGATGGGGCTCCTGCGGTGGGGCAAGAAAG
ACCGAAAGGTCGGGAACAAGGACCCGTACGGCAACCCGGACGTCGAGACC
GCGGCGTCGCTCGGGCCGGTAGGGGCGAGGGTAGCGGGGGGGGGGAAGAA
GGGGCGGAGGGGCAAGAAGAGGGACGGCTTTGTCCGGAATACGGCCATCG
CCCGGTTCCTCAAGGAGACCGACAAGACGGCTCTCAAGACCACTAAGCTC
GCCGCCAAGCTCGCCTTGCAGCTCAGCAAGGCGGAGGCAAAGGCGAGCGC
GGGGGGCGCGGCCGTCGCGTCCGCCGAAGCGGCGTCTCTCCAGCAGCCAG
AAAACATTGACCTCATGGCAGAGGTTCTGGAGAAGAGGGCGGTGGTAGCG
GCCCGCGAAGCCGAGCTAGGTCTTACGGTCGGCGCGGGTGGCAAGGGCGG
GAAGCTGACCAAGAGAGAGATGGGGCTCCTGCGGTGGGGCAAGAAAGACC
GAAAGGTCGGGAACAAGGACCCGTACGGCAACCCGGACGTCGAGACCGCG
GCGTCGCTCGGGCCGGTAGGGGCGAGGGTAGCGGGGGGGGGGAAGAAGGG
GCGGAGGGGCAAGAAGAGGGACGGCTTTGTCCGGAATACG
back to top