mRNA_E-fasciculatus_F_contig13211.2423.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE) HSP 1 Score: 100 bits (248), Expect = 6.330e-24 Identity = 48/73 (65.75%), Postives = 54/73 (73.97%), Query Frame = 1
Query: 1 HIGKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEYTG 195
H GKEGY +VVE CDH+GRI AATK YPGAENDK +I+ D E+PWKS K+KL NADGTETEYTG
Sbjct: 100 HTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTG 172
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 8.690e-24 Identity = 49/71 (69.01%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 7 GKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEYTG 195
GKEGY VVVEA CDH GRI AATK YPG+ENDKTII D EEPW S+KYKL NADG+ETEY G
Sbjct: 73 GKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKG 143
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5K337_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K337_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 8.740e-24 Identity = 49/73 (67.12%), Postives = 54/73 (73.97%), Query Frame = 1
Query: 1 HIGKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEYTG 195
H GKEG +VVE CDH+GRI AATK YPGAENDKT+I+ D EEPWKS K+KL NADGTETEYTG
Sbjct: 66 HTGKEGDTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSYKFKLYNADGTETEYTG 138
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5JJM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM8_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.970e-23 Identity = 47/69 (68.12%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 7 GKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEY 189
GKEGY VVVEA CDH GRI AATK YPG+ENDKTII D EEPW ++KYKL NADG+ETEY
Sbjct: 73 GKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWNTLKYKLYNADGSETEY 141
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5KW69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW69_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 2.090e-23 Identity = 48/71 (67.61%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 7 GKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEYTG 195
GKEGY VVVEA CDH GRI AATK YPG+ NDKTII D EEPW S+KYKL NADG+ETEY G
Sbjct: 73 GKEGYPTVVVEATCDHTGRIIAATKSYPGSANDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKG 143
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5K1K5_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K5_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 3.240e-23 Identity = 47/71 (66.20%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 7 GKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEYTG 195
GKEGY VVVEA CDH G I AATK YPG+ENDK+II D EEPW S+KYKL NADG+ETEY G
Sbjct: 73 GKEGYPTVVVEATCDHTGHIIAATKSYPGSENDKSIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKG 143
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 6.400e-23 Identity = 48/71 (67.61%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 7 GKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISC--------DEEPWKSMKYKLRNADGTETEYTG 195
GKEGY +VVE CDH+GRI AATK YPGAENDKT+I+ DEEPWKS K+KL NADGTETE TG
Sbjct: 84 GKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTG 154
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.160e-18 Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 HIGKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEYTG 195
H GKEGY VV EA+CDHAGRI A+TK YPGAENDKT++ D EEPW S KY++ + G TE+TG
Sbjct: 71 HKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTG 143
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 4.570e-18 Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 HIGKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEYTG 195
H GKEGY VV EA+CDHAGRI A+TK YPGAENDKT++ D EEPW S KY++ + G TE+TG
Sbjct: 303 HKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTG 375
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Match: D7FV01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV01_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 7.060e-17 Identity = 44/62 (70.97%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 40 AMCDHAGRI--PAATKCYPGAENDKTIISCD--------EEPWKSMKYKLRNADGTETEYTG 195
A+ D AGR P KCYPGAENDKTIIS D EEPWKSMKYKLRNADGTETEYTG
Sbjct: 78 AVRDVAGRRCPPLELKCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTG 139 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13211.2423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13211.2423.1 >prot_E-fasciculatus_F_contig13211.2423.1 ID=prot_E-fasciculatus_F_contig13211.2423.1|Name=mRNA_E-fasciculatus_F_contig13211.2423.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=65bp HIGKEGYAFVVVEAMCDHAGRIPAATKCYPGAENDKTIISCDEEPWKSMKback to top mRNA from alignment at E-fasciculatus_F_contig13211:109..303+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13211.2423.1 ID=mRNA_E-fasciculatus_F_contig13211.2423.1|Name=mRNA_E-fasciculatus_F_contig13211.2423.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=195bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13211:109..303+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13211:109..303+ >mRNA_E-fasciculatus_F_contig13211.2423.1 ID=mRNA_E-fasciculatus_F_contig13211.2423.1|Name=mRNA_E-fasciculatus_F_contig13211.2423.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=390bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13211:109..303+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |