mRNA_E-fasciculatus_F_contig13145.2379.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE) HSP 1 Score: 407 bits (1045), Expect = 7.520e-137 Identity = 192/200 (96.00%), Postives = 195/200 (97.50%), Query Frame = 1
Query: 1 TRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANVVPSEVSGKR 600
+RCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPR+MLPPTYNVDTSEKKVRVCSTCY AGEDFRKACLSGSEEGAMAA+STGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANVVP E G R
Sbjct: 380 SRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANVVP-ETGGHR 578
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI) HSP 1 Score: 288 bits (737), Expect = 2.820e-96 Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 1
Query: 1 TRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKK 399
+RCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPR+MLPPTYNVDTSEKKVRVCS+CYGAGEDFRKACLSGSEEGAMAA+STGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKK
Sbjct: 56 SRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKK 188
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA) HSP 1 Score: 223 bits (567), Expect = 3.490e-70 Identity = 102/187 (54.55%), Postives = 128/187 (68.45%), Query Frame = 1
Query: 7 CAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGA 567
CA+C S FG + +RRHHCRNCGR VC ACA+ WP +MLP TY+ E+K R+C TC E FR A L+G + A AAY GCVNLR PY+IY N LPVHCAA GG++ +LAWL++++ CPLF D + IALG+ R+ SVM AA +GH IMRYL KV EI D +LWRAL+K L + +
Sbjct: 37 CALCKSYFGMLSRRRHHCRNCGRAVCDACAKTSWPSSMLPFTYSAAKQERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLNGLPVHCAAEGGSMALLAWLLEEKHCPLFKDLSRTIALGNGRKESVMAVAAQNGHTHIMRYLLHKHSVKVNEITDHKALWRALDKALRESS 223
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE) HSP 1 Score: 221 bits (564), Expect = 9.880e-64 Identity = 103/184 (55.98%), Postives = 133/184 (72.28%), Query Frame = 1
Query: 7 CAVCDSTFGYVLKRR-HHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCL 555
CA C S+F V +RR HHCRNCGRLVC+ CA RFWP++MLP +Y ++E++VRVC TCY G+ FR+A L GS +GAM AY TGCVNLR P++ ELPVHCAA+GGN++++ WLV+DRCCP+F+D EK + D SVM AAA SG V++MRYL+FTQ + + M WR L+ CL
Sbjct: 591 CAECQSSFRPVFQRRKHHCRNCGRLVCTTCAWRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLVEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLSFTQPSAASGM-GMAPFWRGLQACL 771
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI) HSP 1 Score: 219 bits (557), Expect = 5.370e-63 Identity = 102/184 (55.43%), Postives = 132/184 (71.74%), Query Frame = 1
Query: 7 CAVCDSTFGYVL-KRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCL 555
CA C S F VL +RRHHCRNCGRLVC+ CA RFWP++MLP +Y ++E++VRVC TCY G+ FR+A L GS +GAM A+ TGCVNLR P++ ELPVHCAA+GGN++++ WL++DRCCP+F+D EK + D SVM AAA SG V++MRYL FTQ + + M WR L+ CL
Sbjct: 521 CAECQSVFRPVLQRRRHHCRNCGRLVCTTCALRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLLEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLTFTQPSAASGM-GMAPFWRGLQACL 701
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE) HSP 1 Score: 204 bits (519), Expect = 4.690e-58 Identity = 102/213 (47.89%), Postives = 133/213 (62.44%), Query Frame = 1
Query: 4 RCAVCDSTFGYVLK--------------RRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANVVPSEVSGKR 600
RCA+C ST V+ +CRNC R+VC C FW RNM+PP Y + ++RVC TC A E FR A L G E AM+AYSTGCVNL PYT++H ELPVHCAA+GGN+ +L+WLV++ CP+F D +KK+ + D R L+V+GAAA +G VQ MRYL QGC V+EI+ + +L AL+ CL+ A +E S R
Sbjct: 494 RCALCMSTNVSVVHPPGGNNRGNRXXXXXNKNCRNCWRVVCDDCVGTFWARNMVPPRYASERDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCPIFTDSDKKVPIKDLRSLTVLGAAAVNGQVQAMRYLVNQQGCSVSEIKHLPTLKIALDACLHGSAKTRDAERSRYR 706
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: D7FYF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF5_ECTSI) HSP 1 Score: 171 bits (434), Expect = 2.330e-46 Identity = 88/202 (43.56%), Postives = 116/202 (57.43%), Query Frame = 1
Query: 4 RCAVCDSTF--------------GYVLKRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGA 567
RCA+C ST G +CRNC R+VC C FW RNM+PP Y + ++RVC TC A E FR A L G E AM+AYSTGCVNL PYT++H ELPVHCAA+GGN+ +L+WLV++ C +F D +KK+ + D R L+V+GAAA + V EI+ + +L AL+ CL+ A
Sbjct: 492 RCALCMSTNVSAVHPPGGNTRRNGNSSSSDKNCRNCWRVVCDDCIGTFWARNMVPPRYASEGDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCSIFTDSDKKVPIRDLRSLTVLGAAAVNXXXXXXXXXXXXXXXXVLEIKHLPTLKIALDACLHGSA 693
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: A0A7S3YF48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF48_HETAK) HSP 1 Score: 156 bits (394), Expect = 1.310e-42 Identity = 84/184 (45.65%), Postives = 110/184 (59.78%), Query Frame = 1
Query: 7 CAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRL-SVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCL 555
C C + F +L+ HCRNCGR+VC CA WP MLP TY EKK RVC C A EDFR A G G AAY+TG VNLR PYT++ E PVHCAA+GG+L +LAWLVD+R + + K+ L S + S M AA +G++++MR+L + C V +I ++ + A EK L
Sbjct: 82 CGNCGAKFA-LLRPEKHCRNCGRVVCRECARAHWPPRMLPATYLDGAGEKKARVCRGCQWAMEDFRAALRRGDAPGVRAAYATGVVNLRTPYTVHGGEYPVHCAAAGGSLPLLAWLVDERGAFVRDPQSKQRPLFASDGITSCMSLAAVNGNLEMMRWLTQHE-CSVRDIVNLEHFYAATEKLL 263
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: A0A6S8XUE4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XUE4_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.060e-31 Identity = 77/211 (36.49%), Postives = 108/211 (51.18%), Query Frame = 1
Query: 7 CAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNE---LPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLS---------------VMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANVVPSE 585
C +CDS F V +R HCRNCG +CS+C+ W + +P TYN+ +E V+VC +C FR++ L + E A+ Y+TG VNLR P+ E LP+HCAA GG+L++L WLVD CP+ KKI G++R S V A + I+RYL + V+ I+D+ ALE L PS+
Sbjct: 497 CFICDSKFA-VFRRASHCRNCGVCICSSCSV-SWSKVCIPETYNIK-NENVVKVCKSCSSLSRMFRRSLLDANCEDALTIYNTGNVNLRCPFMTSKGEEAMLPIHCAAEGGSLDLLRWLVDIHFCPI-----KKIRTGNNRNKSQNANVLITTGKGRSVVEIAMSGVPSADILRYLVNEKNASVSGIKDLSIALNALEMVLKSSQPSQPSQ 699
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Match: A0A7S4QY11_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY11_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.190e-29 Identity = 75/205 (36.59%), Postives = 110/205 (53.66%), Query Frame = 1
Query: 7 CAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAYSTGCVNLRVPYTIYHNEL--PVHCAASGGNLNILAWLVDDRCCPLFL---------DREKKIAL-GDSRRLSVMGAAAASGHVQIMRYLAFTQG-CKVTEIRDMGSLWRALEKCLYDGANVVPS 582
CA+C+ F V +R HCRNCG +C++C++ W +P TYN+ +EK V+VC TC+ FR+ L G E A++ + TG +NLR + E PVHCAA GGN+ +L WLVD CP+ R+ AL S+ +V+ A + V I+RYL +G C ++D+ + ALE L NV+P+
Sbjct: 408 CALCNGKFA-VFRRPSHCRNCGVCICASCSK-TWSHKSIPETYNMK-NEKNVKVCKTCHFLSYKFRQTLLDGHYEEAVSLFHTGNINLRCQFYSTDGEASYPVHCAAEGGNIQLLQWLVDIHFCPIKQAGSGSKGKKSRKASTALIQTSKGRTVLDIAMTNQRVDILRYLVVDKGICIYDNVKDLKTSLGALEAVL----NVLPA 605 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13145.2379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13145.2379.1 >prot_E-fasciculatus_F_contig13145.2379.1 ID=prot_E-fasciculatus_F_contig13145.2379.1|Name=mRNA_E-fasciculatus_F_contig13145.2379.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=200bp TRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRNMLPPTYNVDTSback to top mRNA from alignment at E-fasciculatus_F_contig13145:722..3504+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13145.2379.1 ID=mRNA_E-fasciculatus_F_contig13145.2379.1|Name=mRNA_E-fasciculatus_F_contig13145.2379.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2783bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13145:722..3504+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13145:722..3504+ >mRNA_E-fasciculatus_F_contig13145.2379.1 ID=mRNA_E-fasciculatus_F_contig13145.2379.1|Name=mRNA_E-fasciculatus_F_contig13145.2379.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1200bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13145:722..3504+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |