mRNA_E-fasciculatus_F_contig13136.2373.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: D8LMD3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD3_ECTSI) HSP 1 Score: 295 bits (754), Expect = 1.040e-92 Identity = 156/158 (98.73%), Postives = 158/158 (100.00%), Query Frame = 1
Query: 37 EALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPEVTQVL 510
EAL+MFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVP+HPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPEVTQVL
Sbjct: 630 EALEMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPIHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPEVTQVL 787
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: A0A835ZIQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIQ3_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.680e-59 Identity = 98/153 (64.05%), Postives = 124/153 (81.05%), Query Frame = 1
Query: 37 EALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPE 495
+AL FP+VPA LFHSS ++G +TSI LP M A+++ VP+HPLA++G TG+IVNALNLMP+G LDGGR+A + FGR+ VLGT+TLLLQA S++FNNYSLQLFWGL+VI+FQRGQDLPA DE++EV EGR +LL F+L TL+PFP
Sbjct: 230 DALAAFPVVPAALFHSSAIIGTITSIALPQAMLQALSTPVPLHPLAVIGFTGVIVNALNLMPVGRLDGGRLAAAGFGRRTAAVLGTLTLLLQAASAIFNNYSLQLFWGLVVIIFQRGQDLPALDEVSEVDEGRNTVLLVLLAFALFTLVPFPS 382
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: A0A835ZNX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNX7_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.830e-46 Identity = 92/185 (49.73%), Postives = 119/185 (64.32%), Query Frame = 1
Query: 37 EALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQ-----------------AISSVFNNYSLQLFWGLLVILFQRGQDLPAKD---------------ELTEVGEGRIVTTGLLLFFSLITLIPFPE 495
+AL FP+VPA LFHSS +G +TSI LP M A+++ VP+HPLA++G+ G+IVNALNLMP+G LDG R+A + FGR+ VLGT+TLLLQ A S++FNN+SLQLFWGL VI+FQRGQDLPA +++E EGR +LL F+L TL+PFP
Sbjct: 144 DALAAFPVVPAALFHSSATIGTITSIALPQAMLQALSTPVPLHPLAVIGLMGVIVNALNLMPVGRLDGERLAAAGFGRRTAAVLGTLTLLLQIVRHPQRTAAIITHFLDAASAIFNNHSLQLFWGLAVIIFQRGQDLPATRGEEGSLALHEGGTMVQVSEFDEGRNTVLLVLLAFALFTLVPFPS 328
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: A0A7S2G2S1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2S1_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.920e-44 Identity = 72/154 (46.75%), Postives = 109/154 (70.78%), Query Frame = 1
Query: 34 QEALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPE 495
QE + +FP++P F SS LVG +TS+ LP+VMGL+ + V VHPL +VG+TG++VNALN MP+G +DGGR + GR + ++G+V LLLQA+S + + +QLFWG+ ++ FQR Q++P DE+TE+ +GR+ G+LL +++ L P P
Sbjct: 6 QEMVSLFPVLPGSTFSSSALVGGITSVLLPSVMGLSDTAAVSVHPLTVVGLTGLLVNALNFMPVGRIDGGRASTCVLGRPSATIIGSVILLLQALSGLAGDSPIQLFWGITILCFQRSQEIPCNDEVTELDDGRVALFGVLLVLTMLCLFPVPS 159
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: M2WYG4_GALSU (Peptidase, M50 family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WYG4_GALSU) HSP 1 Score: 140 bits (354), Expect = 7.430e-36 Identity = 79/155 (50.97%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 31 KQEALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPE 495
Q D FP VP+ LF +S+LVG + I P + L+ +TV VHPL +VG TG+++NALNL+PIG LDGGRI FGR +G +TLLLQ + +V N L LFWG+ V+LFQR DLP +DELTE R +LLF L TLIPFP+
Sbjct: 468 SQTIPDWFPQVPSLLFRASMLVGSLAKIIAPY-LDLS-HNTVAVHPLTVVGYTGLLINALNLLPIGRLDGGRIVQCIFGRSTASRVGGITLLLQGLGAVLGNSPLLLFWGIFVVLFQREMDLPCEDELTEPNNKRSALGLVLLFVMLFTLIPFPD 620
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: A0A2V3J2Y1_9FLOR (Putative zinc metalloprotease EGY2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Y1_9FLOR) HSP 1 Score: 134 bits (338), Expect = 8.630e-34 Identity = 75/165 (45.45%), Postives = 100/165 (60.61%), Query Frame = 1
Query: 1 ALVATFLCWCKQEALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPE 495
AL+A + E + FP VP+ LFH+S+LVG + I LP GL +T+ VHPL ++G TG++VNALNLMPIG LDGGRI + +GR G +TL LQA+SS+ N L LFWGL+ + QR D P ++E+ E R L L+ LIPFP+
Sbjct: 401 ALIAGLVITGSGEVANWFPQVPSNLFHASVLVGAVADIILPP--GLREQATIAVHPLTVIGYTGLLVNALNLMPIGRLDGGRIVQALYGRAIAGRASALTLFLQAVSSLVGNSPLLLFWGLVCVFLQRESDYPCQNEVIEPDSTRTAIGLAALCVMLLVLIPFPD 563
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: R7Q4W8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4W8_CHOCR) HSP 1 Score: 133 bits (335), Expect = 1.940e-33 Identity = 75/165 (45.45%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 1 ALVATFLCWCKQEALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPE 495
AL+A L + D FP VP+ LFH+S+LVG + I LP GL +T+ VHPLA+VG TG++ NALNLMPIG LDGGRI + +GR +TLLLQ SS+ N L LFWGL+ + QR D P ++E+ E R + L+ LIPFP+
Sbjct: 381 ALIAGLLITSSGQIADWFPQVPSALFHASILVGSLADIILPA--GLREQATIAVHPLAVVGYTGLLANALNLMPIGRLDGGRIMQALYGRAVASRATAITLLLQGFSSLLGNSPLLLFWGLVAVFLQRESDYPCRNEVLEPDGTRTAIGVGAICLMLLVLIPFPD 543
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: A0A7S4JVC5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVC5_9STRA) HSP 1 Score: 132 bits (332), Expect = 5.510e-33 Identity = 72/154 (46.75%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 31 KQEALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFP 492
+EAL P+VPA L SS LVG + S+ P V L ++ VP+HPL +VG+TG+I +ALNL+PIG LDGGR SAFGR+ + + LL+ AI+++ + L +FWGLLV +FQR D+P +DE+T V R G L +L+ L+PFP
Sbjct: 402 SEEALAAMPVVPAALLRSSFLVGSLVSVLAPKVAALPLSQPVPIHPLFVVGLTGLISSALNLLPIGRLDGGRAYRSAFGRRPAVLTSFLFLLVMAIAALSGSSQLCIFWGLLVTVFQRNGDVPPRDEVTGVDATRRGLYGALTAVALLALLPFP 555
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: A0A7S1TER5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TER5_9RHOD) HSP 1 Score: 130 bits (326), Expect = 5.350e-32 Identity = 70/166 (42.17%), Postives = 101/166 (60.84%), Query Frame = 1
Query: 1 ALVATFLCWCKQEALDMFPLVPAGLF-HSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPE 495
A + L E + FP+V L HSS+L+G+++ I LP G+ ++ VHPL +VG TG++VNALN++PIG LDGGR+ S FGR + +T++LQ +SSV N L LFWGL V+ QR ++P ++ELTE + R +LF L+ L PFP+
Sbjct: 452 AAIVGLLLTASPENISSFPVVSTDLIAHSSVLLGLLSKIILPG--GMLNETSTAVHPLVLVGYTGLLVNALNMIPIGRLDGGRVVQSLFGRNTASAVSALTVILQGLSSVLGNSPLLLFWGLAVVFLQREAEIPCQEELTEPSDSRAGLGLFMLFIMLLILAPFPQ 615
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Match: A0A5J4Z2W4_PORPP (Putative zinc metalloprotease EGY1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W4_PORPP) HSP 1 Score: 130 bits (326), Expect = 5.850e-32 Identity = 70/154 (45.45%), Postives = 91/154 (59.09%), Query Frame = 1
Query: 31 KQEALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPVHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFP 492
EA P +P LFHSSLL+ S LP+ GL ST+ VHPL +VG TG ++NALNL+P+G LDGGRI S GR G+ TV L LQ SS+ SL L WGL+ I QR ++P ++E++E E R LL +L+ L+P P
Sbjct: 469 STEAAASLPTIPTALFHSSLLLNTFASSLLPD--GLLQQSTISVHPLVVVGYTGALINALNLIPVGRLDGGRIVQSVLGRARAGIFSTVALALQGFSSILGGNSLLLIWGLITIFLQREPEIPCQNEISEPSEARSAMGTFLLALALLILLPVP 620 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13136.2373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13136.2373.1 >prot_E-fasciculatus_F_contig13136.2373.1 ID=prot_E-fasciculatus_F_contig13136.2373.1|Name=mRNA_E-fasciculatus_F_contig13136.2373.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=171bp ALVATFLCWCKQEALDMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASback to top mRNA from alignment at E-fasciculatus_F_contig13136:968..3622- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13136.2373.1 ID=mRNA_E-fasciculatus_F_contig13136.2373.1|Name=mRNA_E-fasciculatus_F_contig13136.2373.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2655bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13136:968..3622- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13136:968..3622- >mRNA_E-fasciculatus_F_contig13136.2373.1 ID=mRNA_E-fasciculatus_F_contig13136.2373.1|Name=mRNA_E-fasciculatus_F_contig13136.2373.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1026bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13136:968..3622- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |