mRNA_E-fasciculatus_F_contig13127.2370.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13127.2370.1
Unique NamemRNA_E-fasciculatus_F_contig13127.2370.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 7.260e-131
Identity = 207/235 (88.09%), Postives = 209/235 (88.94%), Query Frame = 1 
Query:    1 MRAVSSLVSLSALATSSACSRLLDSFVPAGGNAIRASTSKTNAAMALRCLSRARLTSSVRSQAALRPPTAVRTMMXXXXXXXXXXXXXAAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDS 705
            MRAVSSLVSLSALATSSA       FV  GGNAIRAST KTNAAMALRCLSRARLTSSVR QAALR PTAVRTMM              AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGR+VVVLCNLKPV+MKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDS
Sbjct:    1 MRAVSSLVSLSALATSSA-------FVAPGGNAIRASTGKTNAAMALRCLSRARLTSSVRPQAALRRPTAVRTMMMMSDAAVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDS 228
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.900e-67
Identity = 104/148 (70.27%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:  268 AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSKV 711
            AAP G+LTELARLE+R+G+IVEI RHPDAD LYVEK+D+G  E  GPRTIVSGLV +C E+DLL R+VV+L NLKPV+M+GV SAGM+LCSSN DH++V PL PPEG PLGELVTF+GHL +PV+AGNRA KAWK+ +KT+AV +  V
Sbjct:   71 AAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIG--EPAGPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGEDGV 216
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.570e-56
Identity = 94/147 (63.95%), Postives = 117/147 (79.59%), Query Frame = 1 
Query:  271 APTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSKV 711
            AP GELTEL+RLEIR GKI+EI+RHP+AD LYVEK+DLG+ +  GPRTIVSGLV +  E +LLGREVVVL NLKP ++KG+TS GMLLC+SNEDH+ V+PL PP GV LGEL+TF+GH  +P   GNRAGKA+ R ++ L   +  +
Sbjct:  192 APKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEAD--GPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGAGEDMI 336
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 181 bits (460), Expect = 4.450e-53
Identity = 89/148 (60.14%), Postives = 115/148 (77.70%), Query Frame = 1 
Query:  268 AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSKV 711
            +AP   LTEL+RLEIR+GKI+E  +HPDAD+LYVEKVD+G   EE PRTIVSGLV +     ++GR VVVLCNLKP +M+GVTS GMLLC+SNEDH+ V+PLC P+  P+GELVTF+GH  +P+D  NRA KA+ R +  L+ +++ V
Sbjct:  109 SAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVG---EEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEAGV 253
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 177 bits (449), Expect = 5.590e-52
Identity = 92/149 (61.74%), Postives = 109/149 (73.15%), Query Frame = 1 
Query:  265 AAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSKV 711
            AA P+G+  E   LEIR+GKI+EI +HP+ADSLYVEKVDLG  E  GPRTIVSGLV FC    LL R+VVVLCNLKP + KG+ S GMLLCSSN+   KVEPL PP GVP GELV+F+GH+  P + GNRA KA+ + S    V DS +
Sbjct:   66 AAKPSGDSIEA--LEIRVGKILEIGKHPEADSLYVEKVDLG--ESSGPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDSGI 210
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 176 bits (446), Expect = 8.670e-52
Identity = 84/143 (58.74%), Postives = 110/143 (76.92%), Query Frame = 1 
Query:  283 ELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSKV 711
            ELTEL+RLEIR+GKIVE+ RHP+AD LYVEK+DLG  E  GPRTIVSGLV FC    LL   V+VLCNLKP ++KG+TS GM+LC++++D +KV+PL PP   P+G+L+TF+GHL  PV+ GNRA KA+ + +    V++  V
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLG--EPTGPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNEQGV 191
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 176 bits (446), Expect = 1.450e-51
Identity = 84/138 (60.87%), Postives = 107/138 (77.54%), Query Frame = 1 
Query:  286 LTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVD 699
            LTEL+RLEIR+GK+VE  RHPDAD+LYVEKVD+G+ E   PRTIVSGLVNF  + +L GR V+VLCNLKP +M+G+ S GMLLC+SNEDH+KV+PL  P    +G L+TF+GH  +P+DAGNRA KA+ + +     D
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVGEDE---PRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTD 202
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 174 bits (442), Expect = 8.500e-51
Identity = 88/146 (60.27%), Postives = 110/146 (75.34%), Query Frame = 1 
Query:  265 AAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDD 702
            AAAP GEL E +RLEIR+GKIV+++ HPDAD LYVEK+D G+ E   PRTIVSGLV + +  DLL R VVVL NLKP +M+G+TS GMLLC+SNEDHS+V PL PPE    GEL+T +G L  P++  NRA KA+ + +K L V+D
Sbjct:   76 AAAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCGEDE---PRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVND 218
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 175 bits (443), Expect = 8.520e-51
Identity = 88/152 (57.89%), Postives = 116/152 (76.32%), Query Frame = 1 
Query:  265 AAAPTGE---LTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSKV 711
            AA   GE   LTEL+RLEIR+GKI++  +HP+ADSLYVE+VD+G  +E G R IVSGLV+F    +++ R V+VLCNLKP +M+G++S GMLLC+SNEDHS+V+PL  PEGVP+G LVTF+GH   P  AGNRA KA+ + +K+L  D + V
Sbjct:   82 AAGNEGESLPLTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVG--DESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDATGV 231
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BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 169 bits (429), Expect = 6.450e-49
Identity = 81/145 (55.86%), Postives = 110/145 (75.86%), Query Frame = 1 
Query:  271 APTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDS 705
            AP GE+TEL+RLEIR+GKI+E+A HP  + ++VEK+D+G+ E   PRTI SGL ++ +E DLL ++ +VLCNLKP  + GV S GM+LC+S+ +H+ V+ + PP GV  GELVTFDGHL +PVDAGNRA KA+K+ +     DDS
Sbjct:   68 APVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVGEDE---PRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDS 209
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13127.2370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI7.260e-13188.09Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA2.900e-6770.27Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA2.570e-5663.95Endothelial monocyte-activating polypeptide ii pro... [more]
A0A2V3IUX7_9FLOR4.450e-5360.14Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A7S3M138_9STRA5.590e-5261.74Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S0XDL6_9STRA8.670e-5258.74Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S0ZE83_9RHOD1.450e-5160.87Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S2V4I0_9STRA8.500e-5160.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A5J4Z2W6_PORPP8.520e-5157.89Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]
A0A7S2R5F0_9STRA6.450e-4955.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13127contigE-fasciculatus_F_contig13127:157..3314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.8
Seed ortholog evalue9.3e-103
Seed eggNOG ortholog2880.D7FMW6
Preferred nameYARS
KEGG rclassRC00055,RC00523
KEGG koko:K01866
KEGG ReactionR02918
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000049,GO:0001664,GO:0002682,GO:0002685,GO:0002688,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004831,GO:0005102,GO:0005126,GO:0005153,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0006915,GO:0006935,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009605,GO:0009966,GO:0009987,GO:0010467,GO:0010469,GO:0010646,GO:0010758,GO:0012501,GO:0016070,GO:0016604,GO:0016874,GO:0016875,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0023051,GO:0030334,GO:0030545,GO:0031974,GO:0031981,GO:0032101,GO:0032879,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034660,GO:0040011,GO:0040012,GO:0042056,GO:0042221,GO:0042330,GO:0042379,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045236,GO:0046483,GO:0048018,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0050920,GO:0051270,GO:0051716,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1905521,GO:2000145
EggNOG free text desc.tRNA binding
EggNOG OGsCOG0143@1,KOG2241@2759
EC6.1.1.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-09_002760.1
Exons5
Model size711
Cds size711
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13127.2370.1prot_E-fasciculatus_F_contig13127.2370.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13127 157..3314 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927817.809123-CDS-E-fasciculatus_F_contig13127:156..3601622927817.809123-CDS-E-fasciculatus_F_contig13127:156..360Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 157..360 -
1695995707.3304465-CDS-E-fasciculatus_F_contig13127:156..3601695995707.3304465-CDS-E-fasciculatus_F_contig13127:156..360Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 157..360 -
1622927817.8188686-CDS-E-fasciculatus_F_contig13127:1029..12031622927817.8188686-CDS-E-fasciculatus_F_contig13127:1029..1203Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 1030..1203 -
1695995707.3439386-CDS-E-fasciculatus_F_contig13127:1029..12031695995707.3439386-CDS-E-fasciculatus_F_contig13127:1029..1203Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 1030..1203 -
1622927817.8347476-CDS-E-fasciculatus_F_contig13127:2079..22051622927817.8347476-CDS-E-fasciculatus_F_contig13127:2079..2205Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 2080..2205 -
1695995707.3576868-CDS-E-fasciculatus_F_contig13127:2079..22051695995707.3576868-CDS-E-fasciculatus_F_contig13127:2079..2205Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 2080..2205 -
1622927817.8455236-CDS-E-fasciculatus_F_contig13127:2808..29621622927817.8455236-CDS-E-fasciculatus_F_contig13127:2808..2962Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 2809..2962 -
1695995707.369674-CDS-E-fasciculatus_F_contig13127:2808..29621695995707.369674-CDS-E-fasciculatus_F_contig13127:2808..2962Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 2809..2962 -
1622927817.8581233-CDS-E-fasciculatus_F_contig13127:3261..33141622927817.8581233-CDS-E-fasciculatus_F_contig13127:3261..3314Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 3262..3314 -
1695995707.3795726-CDS-E-fasciculatus_F_contig13127:3261..33141695995707.3795726-CDS-E-fasciculatus_F_contig13127:3261..3314Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13127 3262..3314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13127.2370.1

>prot_E-fasciculatus_F_contig13127.2370.1 ID=prot_E-fasciculatus_F_contig13127.2370.1|Name=mRNA_E-fasciculatus_F_contig13127.2370.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=237bp
MRAVSSLVSLSALATSSACSRLLDSFVPAGGNAIRASTSKTNAAMALRCL
SRARLTSSVRSQAALRPPTAVRTMMMMSDAAVTEDEAAAAAPTGELTELA
RLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEES
DLLGREVVVLCNLKPVSMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLG
ELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSKV
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mRNA from alignment at E-fasciculatus_F_contig13127:157..3314-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13127.2370.1 ID=mRNA_E-fasciculatus_F_contig13127.2370.1|Name=mRNA_E-fasciculatus_F_contig13127.2370.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3158bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13127:157..3314- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGCGCAGTTTCTTCCCTCGTGTCTCTGTCGGCCCTGGCCACCTCCTC
GGCGTTCGTCGCTCCAGGCAAGGCGATGCACGAGACTGAGTAACTTCTGT
GCATGAAAGCATGCGCACACACAAACATACTTTTGCTTTGCATGTGATTC
ACAACACAACGGCAGCGTGCGTTATAGGCCGTCTTCCGACCTTGTCCTGG
CATTGCTAGAGCGCAGCATGCTCGCCTCTACTTAACCTTGTGTCGTCTGG
TCACTTTTTTCCCCGTGTGTCCTGATCTCGATGTTGCGGTGTGGGTCATG
TCGCATCTTGCCACTTGTCACCCAATGGCACACCTACGGGACTCTCGACC
AGCTGCTCTCGACTCTTGGACTCTTTCGTTCCAGCAGGCGGCAACGCCAT
CCGCGCAAGCACCAGCAAGACCAACGCTGCCATGGCCCTGAGGTGCCTTT
CTCGAGCACGGCTGACTTCTTCAGTTCGGTCACAAGCGGCACTACGGCCA
CCCACGGTAAAAAAGTCGATGTCCCTGTGTTAATTAATATGGTTGTGTAC
AACGACATCAGTCAGTTCCGCCACATACTTTCGCCAGCAGGTGCAGCTAC
AGCAGTACACAGGCACACCCGTCTACTCTGCAGCGCTTACATTACCCAGG
ATTTGTTAGCGTCTGGTACGGTTGGGCTACGGGCCGAAAACTATTTAGAC
ACATCGACAACCATATCAAGGCACGGCCACTTTCCCATTTCGACGACCAC
TTGCGTCGCAACCCACTAATAGTGTCGCGGCGTTACTCGTATCATCCCGC
AAAATCAGCAAGCATCAGTATCCACGACCATCATAGCTGGCCTTCATGCT
GCTCTTCGTAGCTACAAAGTACACGACGTGCCCCATGCTCCGTAAAAGTT
CATGAGGTTCGCATCCTCGGAGGTGTGTTTGCACCCATGGGCAGTTTGGT
GGGCTCAATCGTTGGTCCACCCGTGTTCCTGTTGCCGTACTCGTATCTGC
GTGCAGCTCGGTCACGGCGTTCATCAACACGAACAGCTGTTTGACGAGAC
TCGACACATGCACGTATCGCGACCAACGGGACTAAAATAATGTTGTACCA
CGACACCAGGCTGTGAGGACGATGATGATGATGTCCGACGCCGCGGTGAC
AGAGGATGAGGCTGCCGCCGCGGCTCCCACGGGAGAGCTGACGGAGCTAG
CGCGGCTCGAAATCCGCATCGGGAAGATCGTGGAGGTGAGAGGGTGCTGT
GTGCGCGTTGATTCCTTTTCACCGCCGACAGTATTCTGCCCCACCTTGCC
CGGTCCACACTACTGATCGTGCTCTGGAGACTTGTGTCAGTGGTATTTTC
TTCGCTCTCTCGTGCCTGTCTATCTCACTTCCTTGTTTCCGTCTCTGGCT
GTGGGTCTGTCTCCATGCCCCTCTCGGTTTGTCTCTGTCTTTCTCCCTCT
TGCTAGTTCCGTTTGTGCTTTGTGTCTTGAGATGAATTGTCTTGCTCGAT
GGCCGTACGGTGAAATCTGTGTTCCCATACGATCTAATCTGCGCAGTAAA
TTATGCAGGACTATATTCTCTTCTCTCTCTCTCTCTCTCTCGCTCCTCTC
TAACATAGTCTAGAATATTGCCAGTATCCTGGTGCGGGTTTCTCATTGCG
CGGTGCCGTGCACACCTTAGGTTGAGGACCCTCGCAACCGCTGCGTTCGC
AACCAGCACAAATCGTACACCGCAAGGCAAACCGGACTCGTTTTGTACCC
ATGCCGTCTGCTGTCTTGGGGAGACAAGCCACGGATGAGGTCACGCAGTA
CTTAAACGGGTGTCTGGGGTTCGGTTTCGAAAGTGCGTTTTGAAGGTGTT
CGCCGGCCGGAATTCCCGCGGAATTGCTGTGACCGAAGAGGCACTTGATT
TTTCCTTGCACAGAAAACGCGGCGGGAATCGTGTCGCTTCGCCTACACGC
ACGCCCCCTTTTCAAACATACCTCTGTCAAACACCATGGGTATTAGTGTG
TCATTTGCTGTCGTGACATTGATCCAGACCGCCTGCCCGGCGCCCCCCCC
TTTCCCCCTCCCGCGTCACCCCTCTTCCTCTTCCTCCCCTGTGTATATGC
CTCGGCCGCAGATCGCCCGGCATCCGGACGCGGACAGCCTGTACGTGGAG
AAGGTGGATCTGGGGCAGGGCGAGGAGGAGGGGCCCCGCACAATCGTCTC
GGGGCTGGTGAACTTCTGCGAGGAGTCGGACCTCTTGGGGAGAGAAGTTG
TCGTGCTGTGCAACCTGAAGCCGGTCAGCATGAAGGTGGGCGTCGCGTTT
TTTTTTTCGTCTCCGCTGTTGGTGGGTGGCTTCTCCTTTGTATGAAAAAG
ACTGTCGTTTGCTCGTTGGCGTCGGTCCTATCCCTACCTTTTTTTGTGGG
ATTCTGGGTCAGGGTGGTCTTTCCTTCGTGCTGTACGTGGTGGAGGGTAC
TCTTGGGAGAGCCTTGAGTAGCTCCGGGGTAGGGTGGAACGGGGGGATAT
AGCTTGGTTGGGTCTAGCTGGCGTGTTTGAGTCTTGACTTGTCTTGTCAC
CCCGTCTGTTTGTGGACACACGGACGCACGCACCAACCGGGCTTCACAGG
GGGGTGGCGACAGGCCTTTTTATGTCGAGTCTGTATGTTCCTGTGGGGTA
TCGCAAGTGTTCACAGAACTCGTCGGTGATGTTCTGTAGGGTAGAAACCC
TGAACAAAATCGTTGGTACGCTCTTGTGGGTACCCTACAGAGCGCACCCT
TTGATCTCTCCGCCTTGGTAGTGCGGCCGAGCTATCTAAACTGGCTGACC
GACTACAGAAACTTTCTGCACCAGACCATGGCCACGTCCAGTCCATCCCA
GCACTCTTGGTCGGGCGGAACCAACAAAATGCATTTTTCAACCGAAACGC
AAACCCCAACAGCTGGCACAAAAGAAAAGACACACCTACCACTACGCTAA
ACAGGGAGTGACGTCGGCTGGCATGCTGCTCTGCTCGAGCAACGAGGACC
ACAGCAAGGTGGAGCCGCTCTGCCCTCCGGAGGGCGTGCCTCTGGGAGAG
CTGGTCACGTTCGACGGGCACCTGCCGTCGCCGGTGGACGCGGGCAACAG
GGCCGGGAAGGCGTGGAAGAGAGCCTCCAAGACCCTAGCCGTGGACGACA
GCAAGGTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13127:157..3314-

>mRNA_E-fasciculatus_F_contig13127.2370.1 ID=mRNA_E-fasciculatus_F_contig13127.2370.1|Name=mRNA_E-fasciculatus_F_contig13127.2370.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1422bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13127:157..3314- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGCGCAGTTTCTTCCCTCGTGTCTCTGTCGGCCCTGGCCACCTCCTC
GGCATGCGCGCAGTTTCTTCCCTCGTGTCTCTGTCGGCCCTGGCCACCTC
CTCGGCCTGCTCTCGACTCTTGGACTCTTTCGTTCCAGCAGGCGGCAACG
CCATCCGCGCAAGCACCAGCAAGACCAACGCTGCCATGGCCCTGAGGTGC
CTTTCTCGAGCACGGCTGACTTCTTCAGTTCGGTCACAAGCGGCACTACG
GCCACCCACGCTGCTCTCGACTCTTGGACTCTTTCGTTCCAGCAGGCGGC
AACGCCATCCGCGCAAGCACCAGCAAGACCAACGCTGCCATGGCCCTGAG
GTGCCTTTCTCGAGCACGGCTGACTTCTTCAGTTCGGTCACAAGCGGCAC
TACGGCCACCCACGGCTGTGAGGACGATGATGATGATGTCCGACGCCGCG
GTGACAGAGGATGAGGCTGCCGCCGCGGCTCCCACGGGAGAGCTGACGGA
GCTAGCGCGGCTCGAAATCCGCATCGGGAAGATCGTGGAGGCTGTGAGGA
CGATGATGATGATGTCCGACGCCGCGGTGACAGAGGATGAGGCTGCCGCC
GCGGCTCCCACGGGAGAGCTGACGGAGCTAGCGCGGCTCGAAATCCGCAT
CGGGAAGATCGTGGAGATCGCCCGGCATCCGGACGCGGACAGCCTGTACG
TGGAGAAGGTGGATCTGGGGCAGGGCGAGGAGGAGGGGCCCCGCACAATC
GTCTCGGGGCTGGTGAACTTCTGCGAGGAGTCGGACCTCTTGGGGAGAGA
AGTTGTCGTGCTGTGCAACCTGAAGCCGGTCAGCATGAAGATCGCCCGGC
ATCCGGACGCGGACAGCCTGTACGTGGAGAAGGTGGATCTGGGGCAGGGC
GAGGAGGAGGGGCCCCGCACAATCGTCTCGGGGCTGGTGAACTTCTGCGA
GGAGTCGGACCTCTTGGGGAGAGAAGTTGTCGTGCTGTGCAACCTGAAGC
CGGTCAGCATGAAGGGAGTGACGTCGGCTGGCATGCTGCTCTGCTCGAGC
AACGAGGACCACAGCAAGGTGGAGCCGCTCTGCCCTCCGGAGGGCGTGCC
TCTGGGAGAGCTGGTCACGTTCGACGGGCACCTGCCGTCGCCGGTGGACG
CGGGCAACAGGGCCGGGAAGGCGTGGAAGAGAGCCTCCAAGACCCTAGCC
GTGGACGACAGCAAGGTGGGAGTGACGTCGGCTGGCATGCTGCTCTGCTC
GAGCAACGAGGACCACAGCAAGGTGGAGCCGCTCTGCCCTCCGGAGGGCG
TGCCTCTGGGAGAGCTGGTCACGTTCGACGGGCACCTGCCGTCGCCGGTG
GACGCGGGCAACAGGGCCGGGAAGGCGTGGAAGAGAGCCTCCAAGACCCT
AGCCGTGGACGACAGCAAGGTG
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