mRNA_E-fasciculatus_F_contig13116.2361.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13116.2361.1
Unique NamemRNA_E-fasciculatus_F_contig13116.2361.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: D7G7Z0_ECTSI (Phosphatidylinositol kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z0_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 5.430e-44
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1 
Query:    1 RQFVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFET 237
            RQFVSDLTDVCEALRFVEPRS+RGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFET
Sbjct:  503 RQFVSDLTDVCEALRFVEPRSDRGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFET 581
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: A0A2R5GBF2_9STRA (Phosphatidylinositol 4-kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBF2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.030e-19
Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = 1 
Query:    1 RQFVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFET 237
            R FV  LTD+CE LRF E R ER  KL A L K++IP C Y+PLC STE ++R++++ P ++ AF+TKER P ++TFET
Sbjct:  349 RDFVRLLTDICEELRF-EDRGERKTKLRARLAKLEIPGCVYIPLCGSTEAWERIVRVIPEQSTAFSTKERCPCIMTFET 426
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: A0A7S2RYB8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RYB8_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.070e-19
Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 1 
Query:    1 RQFVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFET 237
            R+FV DLTD+CE LRFV+ + +R  KL   L ++ IP C YLPLC ST+ ++RV+K+ P+++ AF+T+ER P L+TFET
Sbjct:   78 REFVRDLTDLCEELRFVDVK-DRKAKLRQRLPEINIPGCVYLPLCASTDTWERVVKVVPDKSFAFSTRERCPCLMTFET 155
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: A0A7S2WF11_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WF11_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.140e-19
Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 1 
Query:    1 RQFVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFET 237
            R+FV DLTD+CE LRFV+ + +R  KL   L ++ IP C YLPLC ST+ ++RV+K+ P+++ AF+T+ER P L+TFET
Sbjct:  343 REFVRDLTDLCEELRFVDVK-DRKAKLRQRLPEINIPGCVYLPLCASTDTWERVVKVVPDKSFAFSTRERCPCLMTFET 420
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: M4B709_HYAAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B709_HYAAE)

HSP 1 Score: 77.4 bits (189), Expect = 8.080e-15
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 1 
Query:    7 FVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFE 234
            FV  +TD+ EALRFV    +R  +L + LMK+ +P   Y+PL ++T+PF+R+++I   E  AF+TK RVP L+ FE
Sbjct:  483 FVEQITDIAEALRFVPSIQDRKAQLPSYLMKLHLPPMAYVPLVKATDPFERIVRIPTKEGTAFSTKARVPILLIFE 558
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: A0A3M6VR83_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VR83_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.110e-14
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 1 
Query:    7 FVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFE 234
            FV  +TD+ EALRFV    ER  +L + L+K+ +P   Y+PL ++T+PF+R+++I   E  AF+TK RVP L+ FE
Sbjct:  549 FVEQITDIAEALRFVPSIKERKAQLPSYLVKLHLPPMAYVPLVKATDPFERIVRIPTKEGTAFSTKARVPILLIFE 624
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: A0A5D6XRQ7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRQ7_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.510e-14
Identity = 34/77 (44.16%), Postives = 53/77 (68.83%), Query Frame = 1 
Query:    7 FVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFET 237
            FV  +TD+ E LRFV   +ER  +L + L K+++P   Y+PL ++T+PF+R+++I   E  AF+TK RVP L+ FE+
Sbjct:  589 FVQQITDIAEVLRFVPSIAERKQRLPSYLEKLRLPPMAYVPLVKATDPFERIVRIPTREGTAFSTKARVPILLIFES 665
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: K3WBP3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBP3_GLOUD)

HSP 1 Score: 75.5 bits (184), Expect = 3.850e-14
Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 1 
Query:    7 FVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFE 234
            FV  +TD+ E LRFV    ER  +L   L K+++P   Y+PL ++T+PF+R+++I   E  AF+TK RVP L+ FE
Sbjct:  528 FVQQITDIAEVLRFVPSIQERKKRLPGYLEKLRLPPMAYVPLVKATDPFERIVRIPTKEGTAFSTKARVPILLIFE 603
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BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: A0A662XPX2_9STRA (PH domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPX2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 5.220e-14
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 1 
Query:    7 FVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFE 234
            FV  +TD+ EALRFV    +R  +L + L K+ +P   Y+PL ++T+PF+R+++I   E  AF+TK RVP L+ FE
Sbjct:  590 FVEQITDIAEALRFVPSIQDRKKQLPSFLEKLHLPPMAYVPLVKATDPFERIVRIPTKEGTAFSTKARVPILLIFE 665
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Match: A0A2P4YII2_9STRA (Phosphatidyl inositol kinase (PIK-G1) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YII2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 7.000e-14
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 1 
Query:    7 FVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEPFQRVIKITPNEAKAFNTKERVPSLVTFE 234
            FV  +TD+ EALRFV    +R  +L + L K+ +P   Y+PL ++T+PF+R+++I   E  AF+TK RVP L+ FE
Sbjct:   22 FVEQITDIAEALRFVPSIQDRKAQLPSYLEKLHLPPMAYVPLVKATDPFERIVRIPTKEGTAFSTKARVPILLIFE 97
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13116.2361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Z0_ECTSI5.430e-4498.73Phosphatidylinositol kinase n=2 Tax=Ectocarpus Tax... [more]
A0A2R5GBF2_9STRA2.030e-1954.43Phosphatidylinositol 4-kinase n=1 Tax=Hondaea ferm... [more]
A0A7S2RYB8_9STRA5.070e-1953.16Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2WF11_9STRA5.140e-1953.16Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
M4B709_HYAAE8.080e-1546.05PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A3M6VR83_9STRA1.110e-1446.05Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A5D6XRQ7_9STRA1.510e-1444.16Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WBP3_GLOUD3.850e-1444.74Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662XPX2_9STRA5.220e-1444.74PH domain-containing protein (Fragment) n=2 Tax=No... [more]
A0A2P4YII2_9STRA7.000e-1444.74Phosphatidyl inositol kinase (PIK-G1) n=1 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13116contigE-fasciculatus_F_contig13116:761..1350 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.0
Seed ortholog evalue2.3e-37
Seed eggNOG ortholog2880.D7G7Z0
Preferred namePI4KB
KEGG rclassRC00002,RC00078
KEGG koko:K00888,ko:K19801
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko04011,ko04070,map00562,map01100,map04011,map04070
KEGG ModuleM00130
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0003674,GO:0003824,GO:0004430,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006897,GO:0006898,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007423,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0010256,GO:0010259,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0023052,GO:0030029,GO:0030036,GO:0030258,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0033206,GO:0035295,GO:0035556,GO:0036213,GO:0042710,GO:0043062,GO:0043063,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043583,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045017,GO:0046474,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048015,GO:0048017,GO:0048137,GO:0048232,GO:0048285,GO:0048471,GO:0048513,GO:0048609,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051301,GO:0051321,GO:0051703,GO:0051704,GO:0051716,GO:0052742,GO:0060872,GO:0061640,GO:0061982,GO:0061983,GO:0065007,GO:0071704,GO:0071840,GO:0071889,GO:0071944,GO:0090175,GO:0090407,GO:0090605,GO:0090609,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0140013,GO:1901576,GO:1903046,GO:1905330,GO:2000026,GO:2000027
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0903@2759
EC2.7.1.67
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Exons2
Model size237
Cds size237
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927816.2691424-CDS-E-fasciculatus_F_contig13116:760..9641622927816.2691424-CDS-E-fasciculatus_F_contig13116:760..964Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13116 761..964 +
1695995706.825703-CDS-E-fasciculatus_F_contig13116:760..9641695995706.825703-CDS-E-fasciculatus_F_contig13116:760..964Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13116 761..964 +
1622927816.281238-CDS-E-fasciculatus_F_contig13116:1317..13501622927816.281238-CDS-E-fasciculatus_F_contig13116:1317..1350Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13116 1318..1350 +
1695995706.8465934-CDS-E-fasciculatus_F_contig13116:1317..13501695995706.8465934-CDS-E-fasciculatus_F_contig13116:1317..1350Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13116 1318..1350 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13116.2361.1prot_E-fasciculatus_F_contig13116.2361.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13116 761..1350 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13116.2361.1

>prot_E-fasciculatus_F_contig13116.2361.1 ID=prot_E-fasciculatus_F_contig13116.2361.1|Name=mRNA_E-fasciculatus_F_contig13116.2361.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=79bp
RQFVSDLTDVCEALRFVEPRSERGPKLEALLMKVKIPECGYLPLCRSTEP
FQRVIKITPNEAKAFNTKERVPSLVTFET
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mRNA from alignment at E-fasciculatus_F_contig13116:761..1350+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13116.2361.1 ID=mRNA_E-fasciculatus_F_contig13116.2361.1|Name=mRNA_E-fasciculatus_F_contig13116.2361.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=590bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13116:761..1350+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGCAATTCGTGTCAGACTTGACGGACGTCTGCGAAGCCCTCCGGTTCGT
GGAGCCACGCTCGGAGCGCGGGCCAAAGCTGGAGGCCCTGCTGATGAAGG
TCAAGATCCCGGAGTGCGGGTACCTGCCTCTGTGCCGGTCCACGGAGCCC
TTCCAGCGAGTTATCAAGATTACGCCCAACGAAGCGAAGGCGTTCAATAC
CAAGGTCAGAGAATAAACAGAGAGAACGAGAGACATTTCTCTTTTTTTGA
GAATATACATGACTACGCGTTCGAGACATCACCACAGGCGAAAAGGATGC
CTTTGCCGAGGTTTCCTGTCTTAATTTATTGTTCATCCTGGGAGCTCTTT
GTACGTGTGCACAAGGTCGGGGTGCTGTTTGGATTCTACGCCAGCTGCTG
CTGCCGCTGCTGCTGCTGCTGCTGCTGCTTCTGCTATTGTGAAGAACAGG
GCTGGGTTCTGATCCACTTCTTTGCGTAACGGTATACTTTACATCTATGG
CATCGGTGTGTTTTTTTTCTTTGTTTTCCTTTTCTTTTCCTTCTTTTTCT
TTTCCAGGAGAGGGTACCTTCCTTGGTGACGTTCGAGACG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13116:761..1350+

>mRNA_E-fasciculatus_F_contig13116.2361.1 ID=mRNA_E-fasciculatus_F_contig13116.2361.1|Name=mRNA_E-fasciculatus_F_contig13116.2361.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=474bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13116:761..1350+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGCAATTCGTGTCAGACTTGACGGACGTCTGCGAAGCCCTCCGGTTCGT
GGAGCCACGCTCGGAGCGCGGGCCAAAGCTGGAGGCCCTGCTGATGAAGG
TCAAGATCCCGGAGTGCGGGTACCTGCCTCTGTGCCGGTCCACGGAGCCC
TTCCAGCGAGTTATCAAGATTACGCCCAACGAAGCGAAGGCGTTCAATAC
CAAGAGGCAATTCGTGTCAGACTTGACGGACGTCTGCGAAGCCCTCCGGT
TCGTGGAGCCACGCTCGGAGCGCGGGCCAAAGCTGGAGGCCCTGCTGATG
AAGGTCAAGATCCCGGAGTGCGGGTACCTGCCTCTGTGCCGGTCCACGGA
GCCCTTCCAGCGAGTTATCAAGATTACGCCCAACGAAGCGAAGGCGTTCA
ATACCAAGGAGAGGGTACCTTCCTTGGTGACGTTCGAGACGGAGAGGGTA
CCTTCCTTGGTGACGTTCGAGACG
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