mRNA_E-fasciculatus_F_contig1311.2357.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1311.2357.1
Unique NamemRNA_E-fasciculatus_F_contig1311.2357.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: D8LBC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBC6_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 2.780e-160
Identity = 233/242 (96.28%), Postives = 234/242 (96.69%), Query Frame = 1 
Query:    1 KGNKPKGPPGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 726
            KG+KPKGPPGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGG DEVTL LA     MQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELK LSDRGHNLQA
Sbjct:    5 KGSKPKGPPGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGADEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKALSDRGHNLQA 246
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: A0A6H5KLJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLJ2_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 1.420e-155
Identity = 221/229 (96.51%), Postives = 222/229 (96.94%), Query Frame = 1 
Query:   40 MPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 726
            MPELSDYVKSRDFTGAVTLLEFNRRSGED+TLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGG DEVTL LA     MQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA
Sbjct:    1 MPELSDYVKSRDFTGAVTLLEFNRRSGEDETLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGADEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 229
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: A0A836CHL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL9_9STRA)

HSP 1 Score: 329 bits (843), Expect = 3.590e-107
Identity = 162/236 (68.64%), Postives = 201/236 (85.17%), Query Frame = 1 
Query:   25 PGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLG-GTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSD-TNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 726
            PG+ K+PELS+YV  RD+TGA+ LLEFNRRSG+DD LED L+W+GYCAFH+G YQRA+EAY+E+ ++G G  +V L +A     +Q +D+AEEAA +GP+  L+ RLL H++HK  DE KLM  HQ+LS+ ++EDQLSLAAIHYLRSHFQEATDIYK+LLLENRD++ALNVYVAMCYYKLDYYDVS+EILAVYLQA P SAVA+NLKACN+FRLYNGKAAETEL+ L+++G  LQ+
Sbjct:   25 PGKPKVPELSEYVDKRDYTGALALLEFNRRSGDDDNLEDMLLWIGYCAFHVGRYQRALEAYEEVVAIGAGGGDVHLYVACCHYYLQSYDQAEEAASRGPKGPLRTRLLLHIAHKQNDERKLMQQHQELSEKSSEDQLSLAAIHYLRSHFQEATDIYKKLLLENRDNIALNVYVAMCYYKLDYYDVSMEILAVYLQAQPSSAVAINLKACNLFRLYNGKAAETELRVLAEQGRGLQS 260
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: A0A2R5G680_9STRA (Intraflagellar transport protein 56 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G680_9STRA)

HSP 1 Score: 322 bits (825), Expect = 1.940e-104
Identity = 159/227 (70.04%), Postives = 192/227 (84.58%), Query Frame = 1 
Query:   43 PELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTD-EVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNL 720
            P+  DYVKSRD+TGA+ LLEFN+ +  DD   ++ MWLGYCA HLG+Y++A+EA+Q+L+ LG T  EV L LA     +QM+D+AEE A +GP C L+NRLLFH++HK  DENKLM YHQKLSDT EDQLSLAAIHYLR+H+QEATDIYK+LLL++RDDLALNVYVAMCYYKLDYYDVSLEILAVYLQ+ PDS +A+NLKACN FRLYNGKAAE ELK L+++GH+L
Sbjct:   31 PQREDYVKSRDYTGAIALLEFNQHA--DDFDAESCMWLGYCAAHLGDYKKALEAFQDLQRLGDTGKEVHLYLAICMYFLQMYDEAEEEALQGPTCGLQNRLLFHIAHKQNDENKLMVYHQKLSDTKEDQLSLAAIHYLRNHYQEATDIYKQLLLQHRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQSHPDSVIAINLKACNHFRLYNGKAAEAELKALNEQGHSL 255
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: A0A7S0T0C7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0C7_9STRA)

HSP 1 Score: 285 bits (730), Expect = 4.550e-94
Identity = 146/229 (63.76%), Postives = 183/229 (79.91%), Query Frame = 1 
Query:   43 PELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGG-TDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 726
            P L DY+  RDFTGA+TLLEF  +  + ++ +D L+W+ YCAFHLG+++RA +AY+EL S    +DEV L L+      Q +++AE  A+KGP   LK RLLF++SH+L D+NKLM YHQ L D  EDQL+LA++ YLRS +QEA DIYKRLL+E+RDDLALNVYVA+CYYKLDYYDVSLEIL+VYLQA+PDSAVA+NLKACN FRLYNGKAAETELK LS++G  LQ+
Sbjct:   20 PSLEDYLIQRDFTGALTLLEFKLKCRDGES-KDLLLWIAYCAFHLGHFRRAQDAYKELLSAHEVSDEVYLFLSACMFYQQNYEEAEATAEKGPNTPLKIRLLFNISHRLGDDNKLMKYHQLLRDKREDQLTLASVQYLRSQYQEAIDIYKRLLMESRDDLALNVYVAICYYKLDYYDVSLEILSVYLQAYPDSAVAVNLKACNHFRLYNGKAAETELKALSEKGVMLQS 247
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: A0A812VCC2_SYMMI (TTC26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VCC2_SYMMI)

HSP 1 Score: 293 bits (751), Expect = 1.810e-93
Identity = 154/235 (65.53%), Postives = 180/235 (76.60%), Query Frame = 1 
Query:   28 GQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTD---EVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQ 723
            G +  P L D++++RD+TGA+ LLEF  +  +D  ++D LMW+GY AFHLGNY+RA +AY+EL  L   D   EV L L       QM+D+ E  A KGP  AL+NRLLF++ H+  DE+KLM YHQ L DT EDQLSLA +HYLRSH QEATDIYKR LLENR+DLALNVYVAMCYYKLDYYDVSLEILA YLQA PDSA A+NLKACN FRLYNGKAAE ELK L+DRG NLQ
Sbjct:   18 GAKGQPSLHDFIQTRDYTGALALLEFKLKC-QDGNMKDLLMWVGYAAFHLGNYKRAEDAYKEL--LDNHDVPLEVHLFLGCCYFYQQMYDEGEVEALKGPPNALQNRLLFNICHRKGDEDKLMAYHQNLRDTKEDQLSLAGVHYLRSHHQEATDIYKRQLLENREDLALNVYVAMCYYKLDYYDVSLEILAAYLQAQPDSATAINLKACNHFRLYNGKAAEAELKVLADRGVNLQ 249
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: H3G8C9_PHYRM (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=H3G8C9_PHYRM)

HSP 1 Score: 291 bits (744), Expect = 3.250e-92
Identity = 144/239 (60.25%), Postives = 182/239 (76.15%), Query Frame = 1 
Query:   34 QKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLED---------TLMWLGYCAFHLGNYQRAIEAYQELESLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQ 723
            +K P   + V  RDFTGA  +LEFN +S +  ++           TL+WL Y +FHLGNYQRA++AY +L  +  T EV L  A     +QM+ +A + A+KGP   L+NRLLFH +HK+ DE+KL+ YHQ+L+D+ EDQLSLAAIHY R+HFQEATDIYKRLLLENRDD+ALNVYVAMCYYKLDYYDVSLEI+  YLQAFPDS VA+N+KACN F+LYNG AA+ E+KTL+DRG+N++
Sbjct:   30 KKGPTAEECVAKRDFTGASAILEFNLKSDDASSVSGPAKAEEKRKTLLWLAYASFHLGNYQRALDAYAQLRDVDDTPEVFLYRACCLFYLQMYKEAAKEAEKGPAGQLQNRLLFHCAHKMGDEDKLLVYHQQLTDSKEDQLSLAAIHYFRNHFQEATDIYKRLLLENRDDIALNVYVAMCYYKLDYYDVSLEIMQAYLQAFPDSVVAVNVKACNQFKLYNGAAAKDEIKTLTDRGYNIE 268
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: A0A812Y778_9DINO (Ttc26 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Y778_9DINO)

HSP 1 Score: 290 bits (741), Expect = 1.350e-91
Identity = 149/228 (65.35%), Postives = 177/228 (77.63%), Query Frame = 1 
Query:   31 QQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTDE-VTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRG 711
            ++K PEL  +V + DF+GA+ LLEFN  +   D  + T +WLGYCAFHLG+Y+RAIEAY+E  + G  DE V L +A     +Q + +A E A KGP   L+NR+LFH +HKL DE KLM YH KL +  EDQLSLAA+HYLR H QEATDIYKRLLL+ RDDLALNVYVAMCYYKLDYYDVSLE+LAVYLQ+FPDSA+A+NLKACN FRLYNGKAAE ELK+L D G
Sbjct:   28 ERKKPELDKFVSTYDFSGALALLEFNISA--KDVTDKTWLWLGYCAFHLGDYERAIEAYREALNRGHGDENVHLFIACCMYYLQRYKEAMEEANKGPANMLQNRVLFHCAHKLGDETKLMMYHAKLGEATEDQLSLAAMHYLRGHQQEATDIYKRLLLDKRDDLALNVYVAMCYYKLDYYDVSLEVLAVYLQSFPDSAIAVNLKACNHFRLYNGKAAEAELKSLLDHG 253
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: UPI001F07A5ED (intraflagellar transport protein 56 isoform X2 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07A5ED)

HSP 1 Score: 281 bits (718), Expect = 4.460e-91
Identity = 139/225 (61.78%), Postives = 175/225 (77.78%), Query Frame = 1 
Query:   34 QKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELE-SLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSD 705
            +K+P + DY+  RD+ GA TLLEF R  GE +   D  +W+GYCAFHLG+Y+RA+E Y+ L  S    +EV +LLA     + ++ +AEEAA K P+C L+NRLLFH++HK  DE KLM++HQ L D  EDQLSLA+IHY+RSH+QEA DIYKR+LL+NR+ LALNVYVA+CYYKLDYYDVS E+LAVYLQ+ P+S +A+NLKACN FRLYNGKAAE ELK L D
Sbjct:   26 KKIPRVEDYLNQRDYLGAQTLLEFQRDVGEREEHAD--LWIGYCAFHLGDYKRAMEEYRSLTVSPDSPEEVWVLLACTLFFLGLYREAEEAASKAPKCPLQNRLLFHLAHKFNDEKKLMSFHQNLEDVTEDQLSLASIHYMRSHYQEAIDIYKRILLQNREFLALNVYVALCYYKLDYYDVSQEVLAVYLQSIPESTIALNLKACNHFRLYNGKAAEAELKNLID 248
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BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Match: UPI001B7EEE3D (intraflagellar transport protein 56 isoform X4 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7EEE3D)

HSP 1 Score: 280 bits (716), Expect = 5.070e-91
Identity = 139/225 (61.78%), Postives = 177/225 (78.67%), Query Frame = 1 
Query:   34 QKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQEL-ESLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSD 705
            +K+P+L +Y+ SRD++GA+TLLEF R  GE +  ED  +W+GYCAFHLG+Y+RA+E Y+ L +S     +V + LA     + M+ +AEEAA K P+  L+NRLLFH++HK  DE +LM YHQ L D  EDQLSLA+IHY+RSH+QEA DIYKR+LL+NR+ +ALNVYVA+CYYKLDYYDVS E+LAVYLQ +PDS +A+NLKACN FRLYNGKAAE ELK L D
Sbjct:   45 KKIPKLEEYLTSRDYSGALTLLEFKRHVGESE--EDIDLWMGYCAFHLGDYRRAMEEYEALTKSEDCHPDVWVNLACTFFFLGMYKEAEEAATKAPKSRLQNRLLFHLAHKFSDEKRLMNYHQNLQDITEDQLSLASIHYMRSHYQEAIDIYKRILLDNREFMALNVYVALCYYKLDYYDVSQEVLAVYLQHYPDSTIALNLKACNHFRLYNGKAAEAELKNLMD 267
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1311.2357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBC6_ECTSI2.780e-16096.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLJ2_9PHAE1.420e-15596.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CHL9_9STRA3.590e-10768.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2R5G680_9STRA1.940e-10470.04Intraflagellar transport protein 56 n=1 Tax=Hondae... [more]
A0A7S0T0C7_9STRA4.550e-9463.76Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A812VCC2_SYMMI1.810e-9365.53TTC26 protein n=1 Tax=Symbiodinium microadriaticum... [more]
H3G8C9_PHYRM3.250e-9260.25Uncharacterized protein n=27 Tax=Oomycota TaxID=47... [more]
A0A812Y778_9DINO1.350e-9165.35Ttc26 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
UPI001F07A5ED4.460e-9161.78intraflagellar transport protein 56 isoform X2 n=1... [more]
UPI001B7EEE3D5.070e-9161.78intraflagellar transport protein 56 isoform X4 n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1311contigE-fasciculatus_F_contig1311:13805..16848 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.1
Seed ortholog evalue1e-128
Seed eggNOG ortholog2880.D8LBC6
Preferred nameTTC26
KEGG koko:K19685
GOsGO:0000003,GO:0000902,GO:0000904,GO:0001655,GO:0001822,GO:0002009,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007399,GO:0008150,GO:0008594,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032991,GO:0035239,GO:0035295,GO:0035720,GO:0035735,GO:0035845,GO:0036064,GO:0039022,GO:0039023,GO:0042073,GO:0042461,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0046530,GO:0046907,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048729,GO:0048731,GO:0048793,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060271,GO:0060429,GO:0060562,GO:0060993,GO:0065007,GO:0070925,GO:0071840,GO:0072001,GO:0072073,GO:0072114,GO:0072176,GO:0072178,GO:0097542,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.intraciliary transport
EggNOG OGsKOG3785@1,KOG3785@2759
Ec32 ortholog descriptionTetratricopeptide TPR2
Ec32 orthologEc-27_004420.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons6
Model size727
Cds size726
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1311.2357.1prot_E-fasciculatus_F_contig1311.2357.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1311 13805..16847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927815.5799153-CDS-E-fasciculatus_F_contig1311:13804..138701622927815.5799153-CDS-E-fasciculatus_F_contig1311:13804..13870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 13805..13870 +
1695995706.6282525-CDS-E-fasciculatus_F_contig1311:13804..138701695995706.6282525-CDS-E-fasciculatus_F_contig1311:13804..13870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 13805..13870 +
1622927815.5896397-CDS-E-fasciculatus_F_contig1311:14320..144641622927815.5896397-CDS-E-fasciculatus_F_contig1311:14320..14464Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 14321..14464 +
1695995706.6424997-CDS-E-fasciculatus_F_contig1311:14320..144641695995706.6424997-CDS-E-fasciculatus_F_contig1311:14320..14464Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 14321..14464 +
1622927815.6024199-CDS-E-fasciculatus_F_contig1311:14894..149751622927815.6024199-CDS-E-fasciculatus_F_contig1311:14894..14975Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 14895..14975 +
1695995706.6553574-CDS-E-fasciculatus_F_contig1311:14894..149751695995706.6553574-CDS-E-fasciculatus_F_contig1311:14894..14975Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 14895..14975 +
1622927815.6119914-CDS-E-fasciculatus_F_contig1311:15508..156881622927815.6119914-CDS-E-fasciculatus_F_contig1311:15508..15688Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 15509..15688 +
1695995706.670467-CDS-E-fasciculatus_F_contig1311:15508..156881695995706.670467-CDS-E-fasciculatus_F_contig1311:15508..15688Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 15509..15688 +
1622927815.6216233-CDS-E-fasciculatus_F_contig1311:16171..163391622927815.6216233-CDS-E-fasciculatus_F_contig1311:16171..16339Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 16172..16339 +
1695995706.683087-CDS-E-fasciculatus_F_contig1311:16171..163391695995706.683087-CDS-E-fasciculatus_F_contig1311:16171..16339Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 16172..16339 +
1622927815.6315348-CDS-E-fasciculatus_F_contig1311:16760..168471622927815.6315348-CDS-E-fasciculatus_F_contig1311:16760..16847Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 16761..16847 +
1695995706.6919844-CDS-E-fasciculatus_F_contig1311:16760..168471695995706.6919844-CDS-E-fasciculatus_F_contig1311:16760..16847Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1311 16761..16847 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1311.2357.1

>prot_E-fasciculatus_F_contig1311.2357.1 ID=prot_E-fasciculatus_F_contig1311.2357.1|Name=mRNA_E-fasciculatus_F_contig1311.2357.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=242bp
KGNKPKGPPGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLM
WLGYCAFHLGNYQRAIEAYQELESLGGTDEVTLLLACCYYYMQMFDKAEE
AAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHY
LRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYL
QAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA
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mRNA from alignment at E-fasciculatus_F_contig1311:13805..16848+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1311.2357.1 ID=mRNA_E-fasciculatus_F_contig1311.2357.1|Name=mRNA_E-fasciculatus_F_contig1311.2357.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3044bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1311:13805..16848+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGGGGAACAAACCGAAGGGGCCTCCGGGGCAGCAGAAGATGCCGGAGCT
CAGCGATTATGTCAAGGTGGGTAGGGACAAAGCCTCGGGAACTCGTCATC
GCGTGCGTGTGATCACCGAGTATAGCACTAAGCATCGCAAGAGCCATTAC
AGGTTTATGCTTACAGTAGTACTGCGGCGGGCGTGACGACGACTACTACT
GTGGAGCCGTCCCTCGTAGTGGGATGTTTTGGTCATTTGTACGCATGCAC
TAGACATCAGTCATAGGGAAAGCCCGCAAACCAGCCCAAGACATGCTTAG
TCTTTCAACATCGTCGTCAGCAAAGTTCCTGTGTGATGACTCCAGGTTGT
ACGATTTTTCATGTCTTGGGCGTGTACGCTATTATTATGGCCGCTACAAC
AGCACCCGCAAGACCCCCACGAACTGCTACATGTAGTGTGATGGTGGCTT
GCCAACTTGTATTGTTCGACGACATGCTCACGTAATTTTCTCGTTCTTGG
CTCTTCGTTTCATCAGTCGAGGGATTTCACCGGCGCAGTAACGCTGCTAG
AGTTCAACCGGCGGTCGGGAGAAGACGACACCCTCGAAGACACCCTCATG
TGGCTGGGGTACTGCGCCTTTCACCTCGGGAACTACCAACGAGCCATCGA
AGCCTACCAGGTACATCAAACGTGTCCCGTTTAAAGGTGGGCAATAGCGC
GTCGGGAGGGTTCACAGGTATCTTGGTGATGTTTGCGTTTCACGAATGAG
TCTGATGTGGACAGCGGGAGGTTGTGTCGTAGTGATGGGACACAGTCAGT
GCGGACGAACAAGTTTCAGAGCCGACCAACACACAGTGTGTGGTGTTCAA
CAGAGAGGACGACTACGGCAACAACAACGTTGAAAGACAGCAAACGACGA
CGATGAACTCCGACAAGAAACGTTGATCGTACTCGAAGTAGCAGCAGCAC
GCCAAAGGCCTCCTTCGCAGCACGAAGTCCAACCGATCCCCTGCAGCGGC
ATCGTGTGCTTCACCGCACTTGGCCCCCTGTGAGGATGGCCATCGTTCCG
GCCCTCCGCTAACGGGTAAAACACAAATCGCCCATCGCAGGAGCTGGAAT
CGCTTGGCGGGACGGATGAGGTCACCTTGCTTCTGGCATGTTGCTACTAC
TATATGCAGATGTTCGACAAGGTGAGCTATGTCGGCAAGTATTCCGCGCA
AGCATGGATTATCGGCGATCGGATCGGGGCAACGACAAGAGGTTGGGCAT
AGCGACAGCAGTAGTCCAATTCCTCGTTAGTGGCTGTTCACTCGTCGTCT
AGACTACAGAACGGAGGATACCACCGGAGAAAGAGCCTCAAGAAGCTACA
CCAGAAACTCTGATACTTGCCATGCACCAGCTTTGTCGAGTTATTGCCCA
ACTCACGTGCACTCAAAACAGGTTATAGTCGTGTTTCTTGCATTCTACAA
CGCCCCCCCCGTCCTGGTTTGGCACAGCAAACGCAAGGATAAGGATAAGG
ATAAGGATGATGACTAGTTCACCCTTGCTTGTGAAACGTAGCCTGGGCAG
GCGAAATCCCGGCGTATCGCTCCGTCCCGGCATTGTGCGCATGCGAGGTC
TATCGCCTACCGAGTACGGCATGCGTTTACATGACCCAACCTCCCATCCC
CCCGACTTGTGGGGCTTTCGGTCCCACAACCTTTTGTATATCTACTGCAC
CCAGGCGGAGGAGGCTGCGAAAAAGGGTCCCGAGTGCGCCCTGAAGAATC
GCTTGTTGTTCCACGTGTCGCACAAGCTGCTCGACGAGAATAAGCTCATG
ACGTACCACCAGAAGCTCAGTGACACCAACGAAGACCAGCTGTCTCTCGC
GGCGATCCACTACCTGAGGAGCCACTTCCAGGAGGTGGGGGGAACAACGT
GCTAGACTGAAAGCGAGGATTTTTCGGAGGCCAGTTGCTTCGTCGAGTGC
TGCACAGCTGCTGCTCAACTCTTACTCTTTTCGCCCAGAATATGACCGTT
GGAGGTTTGTTCGCATCCAACAGACTTTGCCGTTGTAATGGGGCCCGTTA
CATGAAAACTACCTACGTCACAGTGAACAAACCGATTCAAACATACCTCG
CGATCGCGTCGTAAGGATTCCTCATTATGAGTTGATTTTCGTCCTTATCA
AACACAAGGGATCTTCTTGCACGAAGACAAACAGAGAATAGATTTTAGCA
CGGTTTGATGTGCGACCGTCGCAAATAGTATTATAGTTCTTCGACGACTG
TAAAATCAGCAAAGACGAAAACACGTGAGGTGCTCGATTGAACCGACCAA
CGAACGCATGCACTGAGGATGACGCAGAATCCATGCGGTCAAACACATAA
AAAAATGAAAAATCCAGGCAACGGACATCTACAAACGCCTTTTGTTGGAG
AATCGGGACGACCTCGCGTTGAACGTGTACGTGGCCATGTGCTACTACAA
GCTCGACTACTACGACGTGTCTCTGGAGATCCTCGCCGTGTACCTGCAGG
CTTTCCCGGACAGTGCTGTCGCCATGAACCTCAAGGTGAGACAATACAAA
GAGAGGGTGTATGTACATGGGAGGGGCGGGGGGGTACTCATTGTCGTGCA
TACCGTAGTCGTTAGGCCATTGGCCTCGCACCCCTACAAAGCCGTGACGA
GGCACGCCGGGTTCTTTCTCACCGGACCAGGCTATCACATCACCAAGCGC
GAAGCGCCGTGAGATATTCGGCGAGTCGCATGTGCATGGGATGGGGATGG
CCTATGTTACGTGACGTGAGCATGCTACTACTACGCAAAACGAAAGGATC
CAACGTACGGTTCCCGGAGAATGAGTTTTTCCGTCCATTCGTGCTCATCA
TTCGCCAGATCGTCAGGTAAATCGTGGAATGGCTCTTCAGTACTCTCGCC
TTCGTTCTCTCAATTTAACACTCTTTCTGCTCCTGCCCGGCGGTGCGCTT
CTTCAGGCCTGCAACGTTTTCCGCCTGTACAACGGCAAGGCGGCGGAGAC
CGAGCTCAAGACTCTCTCCGACCGAGGACACAACCTACAGGCAT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1311:13805..16848+

>mRNA_E-fasciculatus_F_contig1311.2357.1 ID=mRNA_E-fasciculatus_F_contig1311.2357.1|Name=mRNA_E-fasciculatus_F_contig1311.2357.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1452bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1311:13805..16848+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGGGGAACAAACCGAAGGGGCCTCCGGGGCAGCAGAAGATGCCGGAGCT
CAGCGATTATGTCAAGAAGGGGAACAAACCGAAGGGGCCTCCGGGGCAGC
AGAAGATGCCGGAGCTCAGCGATTATGTCAAGTCGAGGGATTTCACCGGC
GCAGTAACGCTGCTAGAGTTCAACCGGCGGTCGGGAGAAGACGACACCCT
CGAAGACACCCTCATGTGGCTGGGGTACTGCGCCTTTCACCTCGGGAACT
ACCAACGAGCCATCGAAGCCTACCAGTCGAGGGATTTCACCGGCGCAGTA
ACGCTGCTAGAGTTCAACCGGCGGTCGGGAGAAGACGACACCCTCGAAGA
CACCCTCATGTGGCTGGGGTACTGCGCCTTTCACCTCGGGAACTACCAAC
GAGCCATCGAAGCCTACCAGGAGCTGGAATCGCTTGGCGGGACGGATGAG
GTCACCTTGCTTCTGGCATGTTGCTACTACTATATGCAGATGTTCGACAA
GGAGCTGGAATCGCTTGGCGGGACGGATGAGGTCACCTTGCTTCTGGCAT
GTTGCTACTACTATATGCAGATGTTCGACAAGGCGGAGGAGGCTGCGAAA
AAGGGTCCCGAGTGCGCCCTGAAGAATCGCTTGTTGTTCCACGTGTCGCA
CAAGCTGCTCGACGAGAATAAGCTCATGACGTACCACCAGAAGCTCAGTG
ACACCAACGAAGACCAGCTGTCTCTCGCGGCGATCCACTACCTGAGGAGC
CACTTCCAGGAGGCGGAGGAGGCTGCGAAAAAGGGTCCCGAGTGCGCCCT
GAAGAATCGCTTGTTGTTCCACGTGTCGCACAAGCTGCTCGACGAGAATA
AGCTCATGACGTACCACCAGAAGCTCAGTGACACCAACGAAGACCAGCTG
TCTCTCGCGGCGATCCACTACCTGAGGAGCCACTTCCAGGAGGCAACGGA
CATCTACAAACGCCTTTTGTTGGAGAATCGGGACGACCTCGCGTTGAACG
TGTACGTGGCCATGTGCTACTACAAGCTCGACTACTACGACGTGTCTCTG
GAGATCCTCGCCGTGTACCTGCAGGCTTTCCCGGACAGTGCTGTCGCCAT
GAACCTCAAGGCAACGGACATCTACAAACGCCTTTTGTTGGAGAATCGGG
ACGACCTCGCGTTGAACGTGTACGTGGCCATGTGCTACTACAAGCTCGAC
TACTACGACGTGTCTCTGGAGATCCTCGCCGTGTACCTGCAGGCTTTCCC
GGACAGTGCTGTCGCCATGAACCTCAAGGCCTGCAACGTTTTCCGCCTGT
ACAACGGCAAGGCGGCGGAGACCGAGCTCAAGACTCTCTCCGACCGAGGA
CACAACCTACAGGCAGCCTGCAACGTTTTCCGCCTGTACAACGGCAAGGC
GGCGGAGACCGAGCTCAAGACTCTCTCCGACCGAGGACACAACCTACAGG
CA
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