mRNA_E-fasciculatus_F_contig13105.2353.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: A0A6G0XXL1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXL1_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 2.210e-8 Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 127 IPISVGLGAAAGLSAPSVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQ 279
+ IS G+G+A A A LVP AMSYFG ++PG+GT+HA GGVAATLQ
Sbjct: 8 VAISAGVGSAGVALAGVGAGALVPTAMSYFGAVVPGVGTLHAAGGVAATLQ 58
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: A0A6G0XXQ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXQ9_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.400e-8 Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 127 IPISVGLGAAAGLSAPSVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQ 279
+ I G+GA + A A LVP AMSYFGV++PG+GT+HA GGVAATLQ
Sbjct: 8 LTIFAGVGAVGVVLAGFGAGALVPTAMSYFGVVVPGVGTLHAAGGVAATLQ 58
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: T0Q0J3_SAPDV (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q0J3_SAPDV) HSP 1 Score: 56.2 bits (134), Expect = 8.020e-8 Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 121 KRIPISVGLGAAAGLSAP----SVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQ 279
K + I+ +G A G++AP S AA VP AMSYFG ++ G+GT+HA GGVAATLQ
Sbjct: 18 KNLLIAGAVGTAVGVTAPLLASSAAAAAVPTAMSYFGTVVSGVGTIHAAGGVAATLQ 74
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: A0A8K1FH21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH21_PYTOL) HSP 1 Score: 54.7 bits (130), Expect = 4.300e-7 Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 106 VVSGAKRIPISVGLGAAAGLSAPSVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQSFATTSAVTSGAVGASVAA 336
+ G +I +GAAA A A LVP AMS FG ++PG+GT+HA GGVAATLQ +A+ + T+ AVG AA
Sbjct: 22 IPEGYGKIVAGAAIGAAALPLAGVAAGALVPAAMSTFGTVVPGVGTLHAAGGVAATLQ-WASATLYTASAVGVGGAA 97
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: A0A6A4Z5H9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z5H9_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 5.430e-7 Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 145 LGAAAGLSAPSVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQ----SFATTSAVTSGAVGASVAATSA 345
+GA A +A A LVP AM+YFG ++ G+GTMHA GGVAATLQ + +T+A T+GAV + A +A
Sbjct: 37 IGAVALPAAGLAAGALVPAAMAYFGTVVAGVGTMHAAGGVAATLQYAVVTLVSTTAATAGAVTGLIGAAAA 107
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: A0A1W0A9D6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9D6_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.360e-6 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 175 SVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQ----SFATTSAVTSGA-VGASVAA 336
+VA VP A+SYFG +IPG+G++HA GGVAATLQ + A++SA SGA +GA+ AA
Sbjct: 10 AVAGAAVPVAISYFGTVIPGVGSLHAAGGVAATLQWASIALASSSAAWSGAALGAATAA 68
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: T0Q4P0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q4P0_SAPDV) HSP 1 Score: 52.4 bits (124), Expect = 2.410e-6 Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 148 GAAAGLSAPSV----AAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQ 279
G A GL+AP + AA VP AMSYFG ++ G+GT+HA GGVAATLQ
Sbjct: 11 GGALGLAAPLLLSVGAAAAVPTAMSYFGTVVSGVGTIHAAGGVAATLQ 58
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: A0A8K1FND2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FND2_PYTOL) HSP 1 Score: 52.8 bits (125), Expect = 3.240e-6 Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 133 ISVGLGAAAGLSAPSVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQSFAT-----TSAVTSGAVG 321
++VGLGAAA LVP AMS FGV++ G+GTMHA GGVAATLQ A+ T+ + GAVG
Sbjct: 15 LAVGLGAAA----------LVPTAMSTFGVVVAGVGTMHAAGGVAATLQVAASALLSGTAIASGGAVG 72
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: W4FC84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FC84_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 3.500e-6 Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 145 LGAAAGLSAPSVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQ----SFATTSAVTSGAVGASVAATSA 345
+GA A +A A LVP AM+YFG ++ G+GTMHA GGVAATLQ + +T+A T+GAV + A +A
Sbjct: 15 IGAVALPAAGLAAGALVPAAMAYFGTVVAGVGTMHAAGGVAATLQYAVVTLVSTTAATAGAVTGLIGAAAA 85
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Match: A0A1W0A0U4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0U4_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 8.120e-6 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 103 VVVSGAKRIPISVGLGAAAGLSAPSVAAMLVPPAMSYFGVIIPGIGTMHAIGGVAATLQ 279
+V++ +++ I +G A L A + VP AMSYFG I+PG+GT+HA GGVAAT Q
Sbjct: 82 IVLTTTQKVVIGAAVGTAIHLVIVCGAGVAVPYAMSYFGTIVPGVGTIHAAGGVAATSQ 140 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13105.2353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13105.2353.1 >prot_E-fasciculatus_F_contig13105.2353.1 ID=prot_E-fasciculatus_F_contig13105.2353.1|Name=mRNA_E-fasciculatus_F_contig13105.2353.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=126bp MFGFEMLTSGVKDMTGSIGAMTAAVAPKAWSSLGVVVSGAKRIPISVGLGback to top mRNA from alignment at E-fasciculatus_F_contig13105:922..1299- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13105.2353.1 ID=mRNA_E-fasciculatus_F_contig13105.2353.1|Name=mRNA_E-fasciculatus_F_contig13105.2353.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=378bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13105:922..1299- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13105:922..1299- >mRNA_E-fasciculatus_F_contig13105.2353.1 ID=mRNA_E-fasciculatus_F_contig13105.2353.1|Name=mRNA_E-fasciculatus_F_contig13105.2353.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=756bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13105:922..1299- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |