mRNA_E-fasciculatus_F_contig131.2345.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig131.2345.1
Unique NamemRNA_E-fasciculatus_F_contig131.2345.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: D8LQJ6_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ6_ECTSI)

HSP 1 Score: 572 bits (1474), Expect = 3.290e-205
Identity = 289/317 (91.17%), Postives = 296/317 (93.38%), Query Frame = 1
Query:    1 MRNNSFGEVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVHCGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGLTKPLMPSPAFYIEMESYWWVRNSIGLRHNFVSYPEQLLPTTAHEQEQPEPS---PWQSCCGSIAACRRSLGNVAARFGASSAQGQNVNGRNSNTAGSVGADSQGETEARGRILPWGV 942
            MRNN+ GEVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGS LEVAFGTLSLLFTILWSMILAG VHCGAEWVMTVWVTHDP YVNQ SVGFSGVIFTLALMESYRSTQPTRSVFGM++VPTRMYPWVLLVLLSVFM +ISFVGHLSGILVGVMHVYGLTKPLMPSPAFYIEMESYWWVR+SIGLRHNFV YP   LPTTA EQEQP PS    WQSCC SI ACRRSLGNVAARFGASSA GQN NGRNSNTAGSVGADS+GETE RGR+LPWGV
Sbjct:    1 MRNNNLGEVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSSLEVAFGTLSLLFTILWSMILAGVVHCGAEWVMTVWVTHDPTYVNQPSVGFSGVIFTLALMESYRSTQPTRSVFGMMRVPTRMYPWVLLVLLSVFMRDISFVGHLSGILVGVMHVYGLTKPLMPSPAFYIEMESYWWVRDSIGLRHNFVPYPPPALPTTADEQEQPGPSIRDSWQSCCDSIGACRRSLGNVAARFGASSAHGQNANGRNSNTAGSVGADSRGETETRGRLLPWGV 317          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: A0A835Z1X9_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X9_9STRA)

HSP 1 Score: 208 bits (530), Expect = 4.350e-62
Identity = 107/253 (42.29%), Postives = 158/253 (62.45%), Query Frame = 1
Query:    7 NNSFGEVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVHCGAEWVMTV--WVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPN-ISFVGHLSGILVGVMHVYGLTKPLMPSPAFYIEMESYWWVRNSIGLRHNFVSYPEQLLPTTAHEQEQPEPSP 756
            ++  GE  G VPLCTL    +C  +   +F+ +T I  Y ++   ++YLGE+YR+IT A +H  +MHI FNMMS L+IG GLE   GT+++  T+ WS+IL G ++C  EW+        H  +++ Q +VGFSGVIFTLA+ME+ RS++P R + GM++VPT++YPW L+++L V M   +SF+GHL+G +VG++H YGLT PL+PS     +ME +  +        NF   P    P  A EQ     +P
Sbjct:    2 SSRLGEALGGVPLCTLCVVAMCCAVHLAIFLLDTPITMYSIMARNVLYLGEWYRIITAAFVHASMMHIGFNMMSLLAIGGGLESDLGTVAMTMTVWWSVILVGGLYCAGEWLFADVRGGEHAREHLLQQAVGFSGVIFTLAVMEAQRSSEPYRMLMGMVKVPTKLYPWALMIVLQVMMKGEVSFMGHLAGAIVGILHTYGLTAPLLPSKQMLHDMEDWPGISAMAAALPNFKRCPP---PPPAGEQHADSDAP 251          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: B8C3M6_THAPS (Rhomboid domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3M6_THAPS)

HSP 1 Score: 186 bits (471), Expect = 5.290e-53
Identity = 96/232 (41.38%), Postives = 145/232 (62.50%), Query Frame = 1
Query:   22 EVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVHCGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGLTKPLMPSPAFYIEMESYWWVRNSIGLRHNFVSYPEQLLP 717
            E    +PL TL+   LC  +      F+  + N+ + P  ++Y+ EYYR+IT +L HG LMHI  NMMS ++IG+ LE  FGT ++  T+LW ++L   ++    W++ V   ++ K + Q S+GFSGVIF L+++E+  +   +RSVFGMIQV ++MYPW LLV+L   MP ISF+GHLSGIL+G + ++G  K + PS A+  ++E+ W    +I  +  FV  PE   P
Sbjct:    6 ETLASIPLATLSIMALCCFVYLYQLAFDPTLHNFTMCPRLVLYMNEYYRIITSSLFHGSLMHIGMNMMSTMAIGTSLEKRFGTFTMALTVLWGVLLTSVIYMTTSWLLYVGFGYE-KMMYQHSLGFSGVIFQLSVLEANLTPNRSRSVFGMIQVSSKMYPWCLLVVLQFIMPQISFLGHLSGILLGTLQLHGADK-IFPSDAYLQDLET-WSALEAITTKPGFVKMPETGSP 234          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: A0A7S2GX31_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GX31_9STRA)

HSP 1 Score: 179 bits (453), Expect = 4.110e-50
Identity = 101/235 (42.98%), Postives = 140/235 (59.57%), Query Frame = 1
Query:   22 EVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVHCGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGLTKP-LMPSPAFYIEMESYWWVRNSIG----LRHNFVSYPEQL 711
            E    +PL TL+   LC I+     +F+  +  Y + P  ++YL EYYR+IT  L H G +H   NM S  +I S LE  +GTL  + TILW MIL   V+    W M +   ++ K + Q SVGFSGVIF L+++ES  +   TRSVFG I+VP+ +YPW LLV+L V +P ISF+GHLSGILVG + +YG+  P ++PS  +  +ME   ++ N I      R  FV  P +L
Sbjct:    6 ETLASIPLATLSIIALCTIIFTYQLLFDPPLHQYTMCPRNVLYLSEYYRIITSNLFHSGFLHFFMNMSSTAAISSSLEHRYGTLKQMVTILWGMILTSIVYMIISWAMYMIFGYE-KSMFQHSVGFSGVIFQLSVLESNINLDRTRSVFGFIKVPSYLYPWALLVVLQVLIPAISFLGHLSGILVGTLQLYGILDPFVLPSDDYLRKMEDRSFIANFINSSSQYRGQFVRAPPEL 239          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: A0A7S0FT53_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FT53_9STRA)

HSP 1 Score: 177 bits (450), Expect = 7.800e-50
Identity = 102/243 (41.98%), Postives = 138/243 (56.79%), Query Frame = 1
Query:   22 EVAGQVPLCTLAFATLCIILQGCVF----VFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVHCGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGLTKPLMPSPAFYIEMESYWWVRNSIGLRHNFVSYPEQLLPTTAHEQE 738
            EVA  +PL       LC+    CVF    + N ++ ++ L P  ++Y  EYYR+ T  + HGGL+HI FNMMS  +IGS LE  FGTL  LFT+   M L    +     +++ W     K V Q SVGFSGV+F L+++E+  S   TRSVFGM+QVP  +YPW LLV L +FMPNISFVGHLSGI VG + +YG+   L+     Y+     W     I  R  +V  P     + +H ++
Sbjct:    6 EVAASIPLGNRFIIGLCV----CVFLLQTILNLDLHDFTLCPRNVLYQHEYYRIFTSCVFHGGLLHIGFNMMSTAAIGSLLEKRFGTLRHLFTVFLGMFLTSWTYILVACLLS-WACRYDKLVYQHSVGFSGVLFQLSVLEANLSPNSTRSVFGMVQVPAYLYPWALLVALQIFMPNISFVGHLSGIFVGTLQLYGVLDALVLPSDEYLRAMDDWPSLQQIAAREGYVRTPTDGSSSISHVRD 243          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: W7TU50_9STRA (Peptidase S54, rhomboid domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU50_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.300e-48
Identity = 93/201 (46.27%), Postives = 129/201 (64.18%), Query Frame = 1
Query:   22 EVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVHCGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRST-QPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGLTKPLMPS 621
            E   ++PLCT     LC+ILQ CV +   N+  + +  + ++Y  EYYR+ T A  H GL HI  NM+SF+ IG+ LE+  GT+    TILWS IL  +++ G    +   VT+  +++  AS GFSGVIFTLA++ES+ S    TRS+ GM QVP R YPWVLL+++ + +P ISFVGHLSG+L+GV+  YG    L PS
Sbjct:   43 ETLSKIPLCTTLTTLLCLILQLCVVILGWNVNLFSISYAAVVYDHEYYRLFTSAYFHLGLFHIAMNMLSFVGIGAWLEMRMGTMYFFLTILWSTILTNSLYIGICSFLAA-VTNHQQWLFYASAGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPARAYPWVLLIIIQLLLPRISFVGHLSGLLIGVLQSYGCLAFLFPS 242          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: A0A7S0STK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STK5_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.330e-46
Identity = 79/176 (44.89%), Postives = 125/176 (71.02%), Query Frame = 1
Query:   94 FVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVHCGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGLTKPLMPS 621
            F+ ++NI NY +    IIY  E YR+IT A +HGGLMHI  NMMS   +GS LE+ FG+LS++F  +W++ L+G  +   +W++ V  T    Y+  ++VG+S V+FT A++E++ + Q  RSVFG+  VP+++YP++LL++L V +PNISF+GHLSG++VG++ + G+   L+PS
Sbjct:    1 FITSSNINNYSINSYNIIYNYELYRIITSAFMHGGLMHIAMNMMSLYQLGSELEIQFGSLSMIFITIWTIFLSGFCYIFLQWLIAV-TTGLRGYMGISAVGYSCVLFTYAVIEAFHTNQSYRSVFGIFNVPSKVYPFILLIILQVMLPNISFIGHLSGVIVGLLTITGVVDYLIPS 175          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: A0A812V7G2_9DINO (RBL15 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812V7G2_9DINO)

HSP 1 Score: 166 bits (420), Expect = 5.920e-45
Identity = 89/200 (44.50%), Postives = 130/200 (65.00%), Query Frame = 1
Query:   31 GQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVH---CGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGLTKPLMPS 621
            G +P  T  FA +C  + G  + F  + G   +    +++LGE++R+ + A LHGG++HI+ NM S L++G  +E   GT   +  +L +++L G ++   C   W     VT D  +++  +VGFSGV+FTLA+ E+  S  PTRSVFG+ +VPTR+YPWVLLVLL   +PNISF+GHLSG+LVGV+HV GL   L+PS
Sbjct:    7 GGLPAGTALFAGICAAVFGVQYAFAVDTGPLAIGAFPVVFLGEWFRLASSAFLHGGILHILMNMASLLAMGPSVESILGTAQFVTLVLAAVLLEGLIYVCVCVGCWA----VTSDAAWLHMYAVGFSGVLFTLAVEEASLSPNPTRSVFGLFRVPTRLYPWVLLVLLQFAIPNISFLGHLSGLLVGVLHVGGLLAWLLPS 202          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: A0A7S0K707_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K707_CAFRO)

HSP 1 Score: 166 bits (420), Expect = 1.710e-44
Identity = 89/200 (44.50%), Postives = 130/200 (65.00%), Query Frame = 1
Query:   31 GQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVH---CGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGLTKPLMPS 621
            G +P  T  FA +C  + G  + F  + G   +    +++LGE++R+ + A LHGG++HI+ NM S L++G  +E   GT   +  +L +++L G ++   C   W     VT D  +++  +VGFSGV+FTLA+ E+  S  PTRSVFG+ +VPTR+YPWVLLVLL   +PNISF+GHLSG+LVGV+HV GL   L+PS
Sbjct:    7 GGLPAGTALFAGICAAVFGVQYAFAVDTGPLAIGAFPVVFLGEWFRLASSAFLHGGILHILMNMASLLAMGPSVESILGTAQFVTLVLAAVLLEGLIYVCVCVGCWA----VTSDAAWLHMYAVGFSGVLFTLAVEEASLSPNPTRSVFGLFRVPTRLYPWVLLVLLQFAIPNISFLGHLSGLLVGVLHVGGLLAWLLPS 202          
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Match: B7FT28_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FT28_PHATC)

HSP 1 Score: 162 bits (409), Expect = 4.210e-44
Identity = 89/195 (45.64%), Postives = 120/195 (61.54%), Query Frame = 1
Query:   16 FGEVAGQVPLCTLAFATLCIILQGCVFVF-NTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWSMILAGAVHCGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQPTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYG 597
            F E+  + P  T     LC+IL     V  + N+  + L P  +IY  E YR+ T AL HG +MH+  NMM+ L+IGS LE  FGT  LL  ILWS++L G ++ G    + + +    + + Q SVGFSGVIF L+++ES   T  +RSVFG   VP+ +YPWVLLV L +FMP +SF GHL GILVG + +YG
Sbjct:    4 FNELLQRTPQTTTGIIALCVILHVVTKVLLDLNLRIFTLCPQLVIYRLEIYRIATSALFHGNIMHLAMNMMTTLAIGSLLEKRFGTFRLLLIILWSILLTGILYIGIALFLAI-IIQKNQLMRQHSVGFSGVIFHLSVLESNLGTHQSRSVFGFFDVPSYLYPWVLLVGLQIFMPGLSFTGHLVGILVGTLQLYG 197          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig131.2345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQJ6_ECTSI3.290e-20591.17Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A835Z1X9_9STRA4.350e-6242.29Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
B8C3M6_THAPS5.290e-5341.38Rhomboid domain-containing protein n=1 Tax=Thalass... [more]
A0A7S2GX31_9STRA4.110e-5042.98Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0FT53_9STRA7.800e-5041.98Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
W7TU50_9STRA2.300e-4846.27Peptidase S54, rhomboid domain protein n=1 Tax=Nan... [more]
A0A7S0STK5_9STRA3.330e-4644.89Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A812V7G2_9DINO5.920e-4544.50RBL15 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A7S0K707_CAFRO1.710e-4444.50Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
B7FT28_PHATC4.210e-4445.64Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig131contigE-fasciculatus_F_contig131:2985..6894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score568.9
Seed ortholog evalue1.4e-159
Seed eggNOG ortholog2880.D8LQJ6
KEGG koko:K09651
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsKOG2632@1,KOG2632@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionPeptidase S54, rhomboid domain
Ec32 orthologEc-10_005950.1
Exons8
Model size945
Cds size945
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig131.2345.1prot_E-fasciculatus_F_contig131.2345.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig131 2985..6894 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927814.3154893-CDS-E-fasciculatus_F_contig131:2984..31771622927814.3154893-CDS-E-fasciculatus_F_contig131:2984..3177Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 2985..3177 -
1695995705.8192923-CDS-E-fasciculatus_F_contig131:2984..31771695995705.8192923-CDS-E-fasciculatus_F_contig131:2984..3177Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 2985..3177 -
1622927814.3293686-CDS-E-fasciculatus_F_contig131:3616..37431622927814.3293686-CDS-E-fasciculatus_F_contig131:3616..3743Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 3617..3743 -
1695995705.8301039-CDS-E-fasciculatus_F_contig131:3616..37431695995705.8301039-CDS-E-fasciculatus_F_contig131:3616..3743Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 3617..3743 -
1622927814.339749-CDS-E-fasciculatus_F_contig131:3902..40021622927814.339749-CDS-E-fasciculatus_F_contig131:3902..4002Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 3903..4002 -
1695995705.8412766-CDS-E-fasciculatus_F_contig131:3902..40021695995705.8412766-CDS-E-fasciculatus_F_contig131:3902..4002Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 3903..4002 -
1622927814.354343-CDS-E-fasciculatus_F_contig131:4299..44861622927814.354343-CDS-E-fasciculatus_F_contig131:4299..4486Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 4300..4486 -
1695995705.8590798-CDS-E-fasciculatus_F_contig131:4299..44861695995705.8590798-CDS-E-fasciculatus_F_contig131:4299..4486Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 4300..4486 -
1622927814.364476-CDS-E-fasciculatus_F_contig131:5013..50991622927814.364476-CDS-E-fasciculatus_F_contig131:5013..5099Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 5014..5099 -
1695995705.8778758-CDS-E-fasciculatus_F_contig131:5013..50991695995705.8778758-CDS-E-fasciculatus_F_contig131:5013..5099Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 5014..5099 -
1622927814.377665-CDS-E-fasciculatus_F_contig131:5491..55841622927814.377665-CDS-E-fasciculatus_F_contig131:5491..5584Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 5492..5584 -
1695995705.8897986-CDS-E-fasciculatus_F_contig131:5491..55841695995705.8897986-CDS-E-fasciculatus_F_contig131:5491..5584Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 5492..5584 -
1622927814.3888757-CDS-E-fasciculatus_F_contig131:6339..64141622927814.3888757-CDS-E-fasciculatus_F_contig131:6339..6414Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 6340..6414 -
1695995705.8990324-CDS-E-fasciculatus_F_contig131:6339..64141695995705.8990324-CDS-E-fasciculatus_F_contig131:6339..6414Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 6340..6414 -
1622927814.4002094-CDS-E-fasciculatus_F_contig131:6810..68941622927814.4002094-CDS-E-fasciculatus_F_contig131:6810..6894Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 6811..6894 -
1695995705.9080045-CDS-E-fasciculatus_F_contig131:6810..68941695995705.9080045-CDS-E-fasciculatus_F_contig131:6810..6894Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig131 6811..6894 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig131.2345.1

>prot_E-fasciculatus_F_contig131.2345.1 ID=prot_E-fasciculatus_F_contig131.2345.1|Name=mRNA_E-fasciculatus_F_contig131.2345.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=315bp
MRNNSFGEVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIY
LGEYYRVITGALLHGGLMHIVFNMMSFLSIGSGLEVAFGTLSLLFTILWS
MILAGAVHCGAEWVMTVWVTHDPKYVNQASVGFSGVIFTLALMESYRSTQ
PTRSVFGMIQVPTRMYPWVLLVLLSVFMPNISFVGHLSGILVGVMHVYGL
TKPLMPSPAFYIEMESYWWVRNSIGLRHNFVSYPEQLLPTTAHEQEQPEP
SPWQSCCGSIAACRRSLGNVAARFGASSAQGQNVNGRNSNTAGSVGADSQ
GETEARGRILPWGV*
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mRNA from alignment at E-fasciculatus_F_contig131:2985..6894-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig131.2345.1 ID=mRNA_E-fasciculatus_F_contig131.2345.1|Name=mRNA_E-fasciculatus_F_contig131.2345.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3910bp|location=Sequence derived from alignment at E-fasciculatus_F_contig131:2985..6894- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGAAATAACAGCTTCGGGGAGGTTGCGGGGCAGGTGCCGCTGTGCAC GCTGGCGTTCGCCACGCTGTGCATCATACTGCAGGTCTGTGCTCCTCGCT CCAGTGATCGATATCTTTGACCCTTTTCCGTTGCTGTGTAAGAGGTCTAT GGCCCAAACCGTCGCTGCTAGCTGCGTAGAGAAGCAGGTCCTATTTCGTT CCGGTTTACTCCAAAGAGCAACATGGATGGTGTGACAGAATTCATGCATG GGCCAATTTCGATTGATCAAACAATCACCCCCCCAACTTGTAACAGCAGT GAGGTAAACCAGTCACGTGCTGTGCTGCAATCGCAACATGTGTTGTGTCG TCATACAACTCCTCCTGTATACACTGGAACACCGGCACAGGTTTGAAGTA TCGTTGACGCATGTGCATAATATGTGTCACATACATCCCGTCTCCGCGTG TGCCTCGGCTCTCCCGTTTACGTTTTGCAGGGGTGCGTCTTTGTGTTCAA CACGAACATCGGGAACTACGTTTTGATTCCATCGCGCATCATATACTTGG GAGAGGTGCGACACACGTATTTGATCACCACAAGTTTCAGAGTAACACGT TGCTTTCCTTTAGCCTGTCCTGAATCCTCGATTCAACGTCGTCCCAGAAG GACCAGGTTTCAATTGTACAACTGCCGATGTAGGCTCGCACCCAAATCGC CTTTGGTCTCTTCCCGCTGAGGCGGATGCTCCATGTGCTAAGCTTAAATT TCCGATGCTGTGTACACCACGGTCCAAACGTTCGTCCTTAAACGCATGGG GATGACATGTGGCTGGCATTCCCCGCTACGACACCTAATCGGAGGCACGA GAAATGCCTCCATGCCAAGGTGGCATCCACGACCTCGTTGTGTTCTCGCA CGCAACGCGGGTCACACAGCAGTGACTGAGTGGTTGGAAGTTGGTTCTTC TCCTTGCAGCGACGGTTTTCTCACGTAGTGCGTGGCTTATTCGAAAATAT TATCACCCCTGCCTCCTGGTGTACGCTCAAATTTTGTCCGCTGGGGGCGT TTCCCATGCTGCTGCTTGTGTTCACAGCAATGCGCCGGGCTCGGACACGC GCTAACCAACGGCTGCGGTTTGAGCTTTTGCAATCCTTCACTGAGGTCCA CGTACAGGCGCATGCAAACGCGAGCCAAGCGTACACCTATCATACGATGA CATCCCCTCGGCCAACTTGCGCGCTGACAACCGCGATGCTTTTCTGCTCA AGGTTGGACATGGCCACCAAATCATGCCCCTCTGACGAATGCTTTTGTGT GTCTTTGCAGTACTACAGGGTAATCACGGGAGCATTGCTCCATGGCGGGC TGATGCACATCGTGTTCAACATGATGTCCTTCCTTTCCATCGGATCCGGC CTGGTAGGTGCTCCCCACATAGAAGGCTCAAGTGCAAAATTGTGTCTTCA TTGCACGCGAAGAAACGCAGGTCGTGGTTGCGAGGTGTTCCGTAGGTGAA GTTAGATCATCGGTGTGCCTGGAATGCAATAATGGGTCAAAGTGAACACA GAGACTACGGCCGTGCGCAACCTGCCGTTCAAGAGAAAGCAGTAGAAGAT GTTAATTTAGCTAATAGCCTTGTTGTCATGAACCCCTTGTGCAAATACTT CATGCCCTTCTTCTCGGTTTGAAAGTGAAGTGTTCTTGGCGTGCTTTTTC TTCTCTGCCACCTCTCACTCGCACCCCGTTGTACCTGACAACTTGCTTGG CCTCCTTCCTCTGACGCTGCGGTTACCGCGATGACTGCATTTCAGGAGGT GGCCTTCGGGACTCTGTCGCTCTTGTTTACCATCTTGTGGTCCATGATCT TGGCTGGTGCGGTTCACTGCGGAGCGGAATGGTGGGTGGAATATCCCTCT GGACTTACCTTCTGCTGAAACCTACAACAGCGGCGGTACGCTGCGATGGC ATCACGTAGCCGTGTTTCGGTGTACTCCCGAGTAGCTGGAACAGTAACGC CCCTAGCAAAACGTCTGATTGCTGTGTACGCTCTATCAACGCTTCTATTT TGTAATGAACGTTCAAGTTGTAGAGCCATCCTGACCTTGTTGTGTGGCTT CGGCTCGAAGATGCAAATCGGTAGATGCCATGGTCCAGTGTCAGTGCTTG CTTTCGCTCATCCCGCGAAGGTGCCAAAACAATTATCGCTCTCAACCCCA AGATTCTACTTGAGCTCTATTGGTTTGCCTGCAGTTCGTTACGAGGCTAG CGAAAACTTGGCAATGACGTCCATTGCACACATTTCGGAAGTATCGCGCT CCTGTTCATGATGGAGGCGCAAAAACAAATTCTCGTGGAAAGACGGCCTC GAACTCTCCTGTTTGCCGCTTTGATCCTCCCTGTCGATGTCTGTCTGCCC CTCTGTAGGGTGATGACTGTGTGGGTTACTCACGACCCGAAGTATGTCAA CCAGGCCTCCGTTGGCTTTAGCGGGGTGATATTTACGCTGGCTCTCATGG AGAGCTACCGGTCGACGCAGCCCACACGCTCAGTGTTTGGCATGATACAA GTGCCCACGCGGATGTACCCTTGGGTTCTCCTGGTGCTGTTGTCGGTGAG ACCCCAAAAGAGACTGTAAGGATAAGTAAAAGGGTGGATCACGGCATATC GCGCGTCAGAATGTTGCTCTCAGTGTTTGGCATGATATCCTAATGAGAGA TTTGTGTGGCGTCCCGAGTACCCGTGGTTCCTGCTGCTGATGTAGCTGTC GGCGGGACCCGAACTAGATGCTGTGATCCCTGTGTGTGTTTTGTTGCCGT TGTCAACATCCGAGTGCTGTCGGCGTTTTCGATTTACTGACGTATTCCTT ATAGATCATGGTCCTCGCCCGCATTACCCACGCGAACGGCAGGTCTTCAT GCCGAACATCTCCTTCGTGGGCCACCTTTCCGGCATCCTGGTCGGCGTGA TGCACGTTTATGGGCTAACGAAGCCTCTGATGCCGTCTCCAGGTGACGCT TGCTCCGTTTTGTATTGAACTTGCGGCGTGCATCGTCGAAACAACAATGC TCATGTGGAGAGTGGCGGGCTATTGAGCCTATGCAGCACAGTCGGCTCGA CCGCCACTATCCACCACTTTTCGTCCGTGTGTCGGTTCCTCATTCCTGCA GCCTTCTATATTGAGATGGAGAGCTACTGGTGGGTACGAAATAGCATCGG GCTGAGGCATAACTTCGTCTCCTACCCAGAACAGCTGCTGCCAACCACAG CCCACGAGCAAGAACAACCTGAACCAAGGTAATGTGTTGTTCGGTGTCCG CGTGTGTGCTAACTCCGTTAGCCGTGAATTTGTTGGCTGGCAGACCCCTT CTCGGACGGAAAGGTTTGGCAACCGAGCAATACGCCGTGTTGACAAGAAC CGCCAACAAGCCGTTGCCATGACCTAGGGTTGGTTCATTGGAAGAGTTTT GTCAGAGTTTTATACAGAATCCAGGGGGTTGTTTGTGATGACAGTTACTA GGCAGGGCCCTCGCGACCCGACACGAGGCGATCGTGGGGACAATATAGAG TGCGTGCGCGCGCTGCCGCATCCATTGTGCCGTTGATCACCCAACGAACC AAGGCAGCAGCAGTCCGTCTGCGCACGTGAGTACACCTCGATAACACCAT CAGCAACGGTGACAAAATAATGATAACAGTTTTCCTGCATTCCGTGTTTC CCCGCCCCCCTCCGCAGTCCGTGGCAAAGCTGTTGCGGTTCCATCGCGGC GTGCCGACGGTCGCTCGGTAACGTGGCTGCCCGATTTGGAGCCAGCAGTG CGCAAGGGCAAAATGTCAATGGTAGAAATAGCAATACCGCGGGCTCCGTT GGGGCTGATTCACAGGGAGAAACGGAGGCCAGAGGAAGGATTCTGCCATG GGGAGTTTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig131:2985..6894-

>mRNA_E-fasciculatus_F_contig131.2345.1 ID=mRNA_E-fasciculatus_F_contig131.2345.1|Name=mRNA_E-fasciculatus_F_contig131.2345.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1890bp|location=Sequence derived from alignment at E-fasciculatus_F_contig131:2985..6894- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGAAATAACAGCTTCGGGGAGGTTGCGGGGCAGGTGCCGCTGTGCAC
GCTGGCGTTCGCCACGCTGTGCATCATACTGCAGATGAGAAATAACAGCT
TCGGGGAGGTTGCGGGGCAGGTGCCGCTGTGCACGCTGGCGTTCGCCACG
CTGTGCATCATACTGCAGGGGTGCGTCTTTGTGTTCAACACGAACATCGG
GAACTACGTTTTGATTCCATCGCGCATCATATACTTGGGAGAGGGGTGCG
TCTTTGTGTTCAACACGAACATCGGGAACTACGTTTTGATTCCATCGCGC
ATCATATACTTGGGAGAGTACTACAGGGTAATCACGGGAGCATTGCTCCA
TGGCGGGCTGATGCACATCGTGTTCAACATGATGTCCTTCCTTTCCATCG
GATCCGGCCTGTACTACAGGGTAATCACGGGAGCATTGCTCCATGGCGGG
CTGATGCACATCGTGTTCAACATGATGTCCTTCCTTTCCATCGGATCCGG
CCTGGAGGTGGCCTTCGGGACTCTGTCGCTCTTGTTTACCATCTTGTGGT
CCATGATCTTGGCTGGTGCGGTTCACTGCGGAGCGGAATGGAGGTGGCCT
TCGGGACTCTGTCGCTCTTGTTTACCATCTTGTGGTCCATGATCTTGGCT
GGTGCGGTTCACTGCGGAGCGGAATGGGTGATGACTGTGTGGGTTACTCA
CGACCCGAAGTATGTCAACCAGGCCTCCGTTGGCTTTAGCGGGGTGATAT
TTACGCTGGCTCTCATGGAGAGCTACCGGTCGACGCAGCCCACACGCTCA
GTGTTTGGCATGATACAAGTGCCCACGCGGATGTACCCTTGGGTTCTCCT
GGTGCTGTTGTCGGGTGATGACTGTGTGGGTTACTCACGACCCGAAGTAT
GTCAACCAGGCCTCCGTTGGCTTTAGCGGGGTGATATTTACGCTGGCTCT
CATGGAGAGCTACCGGTCGACGCAGCCCACACGCTCAGTGTTTGGCATGA
TACAAGTGCCCACGCGGATGTACCCTTGGGTTCTCCTGGTGCTGTTGTCG
GTCTTCATGCCGAACATCTCCTTCGTGGGCCACCTTTCCGGCATCCTGGT
CGGCGTGATGCACGTTTATGGGCTAACGAAGCCTCTGATGCCGTCTCCAG
GTCTTCATGCCGAACATCTCCTTCGTGGGCCACCTTTCCGGCATCCTGGT
CGGCGTGATGCACGTTTATGGGCTAACGAAGCCTCTGATGCCGTCTCCAG
CCTTCTATATTGAGATGGAGAGCTACTGGTGGGTACGAAATAGCATCGGG
CTGAGGCATAACTTCGTCTCCTACCCAGAACAGCTGCTGCCAACCACAGC
CCACGAGCAAGAACAACCTGAACCAAGCCTTCTATATTGAGATGGAGAGC
TACTGGTGGGTACGAAATAGCATCGGGCTGAGGCATAACTTCGTCTCCTA
CCCAGAACAGCTGCTGCCAACCACAGCCCACGAGCAAGAACAACCTGAAC
CAAGTCCGTGGCAAAGCTGTTGCGGTTCCATCGCGGCGTGCCGACGGTCG
CTCGGTAACGTGGCTGCCCGATTTGGAGCCAGCAGTGCGCAAGGGCAAAA
TGTCAATGGTAGAAATAGCAATACCGCGGGCTCCGTTGGGGCTGATTCAC
AGGGAGAAACGGAGGCCAGAGGAAGGATTCTGCCATGGGGAGTTTAGTCC
GTGGCAAAGCTGTTGCGGTTCCATCGCGGCGTGCCGACGGTCGCTCGGTA
ACGTGGCTGCCCGATTTGGAGCCAGCAGTGCGCAAGGGCAAAATGTCAAT
GGTAGAAATAGCAATACCGCGGGCTCCGTTGGGGCTGATTCACAGGGAGA
AACGGAGGCCAGAGGAAGGATTCTGCCATGGGGAGTTTAG
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