mRNA_E-fasciculatus_F_contig1309.2339.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A6H5JRG4_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG4_9PHAE) HSP 1 Score: 572 bits (1475), Expect = 8.470e-202 Identity = 324/345 (93.91%), Postives = 326/345 (94.49%), Query Frame = 1
Query: 1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSASATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGTSDETEVCIAAADDEDTERE 1035
HPKFN+KSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQR AASAAAAKRVGARSLPFLGVVNSAS TDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEA XXXXXXXXXXXXX EDVERREKKAAELGQEPPESAVKGAEA AATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQ+LSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPK ATGDSDGT DE E AAA DE TERE
Sbjct: 166 HPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRVAASAAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAEXXXXXXXXXXXXXVLEAKQREDVERREKKAAELGQEPPESAVKGAEAKAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKGATGDSDGTVDEAEAA-AAAGDEGTERE 509
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: D7FVT5_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT5_ECTSI) HSP 1 Score: 383 bits (983), Expect = 3.910e-131 Identity = 210/241 (87.14%), Postives = 214/241 (88.80%), Query Frame = 1
Query: 313 MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGTSDETEVCIAAADDEDTERE 1035
MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKK+LLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEA EDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQ+LSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGT D+TE AAA DED E+E
Sbjct: 1 MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKSLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAERARLAEEQRVAQEALEAKLREDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGTVDDTEAA-AAAGDEDAEQE 240
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A835Z0S3_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S3_9STRA) HSP 1 Score: 165 bits (418), Expect = 6.230e-44 Identity = 118/319 (36.99%), Postives = 172/319 (53.92%), Query Frame = 1
Query: 1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSASATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSS----TMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
HP F + ++ ATE A N+ LV++ +EKG GK ++ DDAI ++ DP V FI+ F+++ G S + A AA+R GA+SLP+LGV+ T+ + +R+ V +HHCNPPPSA +V WM+++LE+K +LE + E RL E + ER +GY++++ D + +E+ E A XXXXXX LG EP GA A A + LRL DG R RRRFL SD ++ DWADV GV+L+A +LS + + + G T+E AGL + L+ VE +
Sbjct: 82 HPIFFEGTYKQATEAALRANKFTLVFLTSEKG--GKKSRADDAIARSFTDPAVISFINEHFILFAAAGPSPS-----GADAARRTGAKSLPYLGVIR--------TVAKDSKRALVGLHHCNPPPSAGGLVKWMSQLLEVKGGVLEADKTELARLAVEANLAKERQKGYAEAVMVDQKQIRKEKREAAAKAKEEAERLAAEAAXXXXXXXXXXXXXXXXXXLGDEP----AAGAAAAAVEVALRLPDGRRERRRFLLSDDTERLYDWADVLGVELEASRLSRGGVRRGQEGAVDLAAEQGKTLEAAGLTGRVLVLVEAR 381
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A7S3EE78_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE78_9RHOD) HSP 1 Score: 87.8 bits (216), Expect = 1.530e-15 Identity = 95/322 (29.50%), Postives = 148/322 (45.96%), Query Frame = 1
Query: 1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICK-ALADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSASA-TDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARV-----LELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
HP+F + ++ +A A R + LV++ +E C+ L EV +ID + + W G S A + +G + PF+ ++ S +D +TL A + W+ + L + L VE ++ R + ++ Y ++L+ D RE +E XXXXXXXXXX VERRE K LG+EP KG T T+ LRL DG R+ RRFL SD + + DWAD+ GV ++ L S+ P+ ++ +P D+ T+EEAGL + +L VE++
Sbjct: 151 HPRFFEGTYLEALAAAGARFQFLLVFLHSEMHPASVR------FCRQVLGSREVIRYIDENVIFWARGIASPEGYRAQ-----RLLGVTTYPFVALITSPPGRSDGVTLSEYNS-------------DAGDFLQWLQTMSARFGTTLTRRRLHVEERDEAR-----QLREQQDREYHETLEADRRREQAAKEAAEQAAEQERLKREXXXXXXXXXXXLVERREGKRVALGEEPE----KGPGVT--TIGLRLPDGKRVDRRFLVSDKVAILFDWADINGVSIEHAALVSSFPRRTYQYPEDADKTLEEAGLSQGTMLLVEER 437
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A5J4Z6R3_PORPP (FAS-associated factor 2-B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6R3_PORPP) HSP 1 Score: 81.6 bits (200), Expect = 1.950e-13 Identity = 107/325 (32.92%), Postives = 153/325 (47.08%), Query Frame = 1
Query: 1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKA-LADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARS------LPFLGVVNSASATDKMTLERKLERSTVAMHHCNP---PPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
H +F S A TA + LVYI E + ++ C++ L D +V FID +F+ W AAS A+ V ARS LP L +V + +AM N P A+ + WM RV E L +Q+ + + ++ E + ++L++ XXXXXXXXXXXXXXXXXXXXX +K LG+EPP A A+++LR+ DGSR RRFLR + + DWAD GV++ L S+ P+ +F +P D M+I EAGL A+L +E++
Sbjct: 167 HARFTRTSLVQALRTAGREYKFALVYIHDEN------REACNSFCRSVLQDGQVIRFIDEAFIFW-----------AASTRFAETVQARSEFRLTHLPALAIVEGHPT--------RPPGRVIAMKQANAFGGPMDAAGVFQWMQRVQERYGVSLISARIQQEERETNRLLRQQQDEEFQRALEEXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQELLGEEPPAQG-----AVTASVVLRMPDGSRNTRRFLRDTKLEMLFDWADTLGVEIGQALLVSSYPRRAFKYPEDKDMSIAEAGLTPSAMLLIEER 454
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A7S0ZCT7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCT7_9RHOD) HSP 1 Score: 79.0 bits (193), Expect = 1.750e-12 Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 631 DVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSD 972
D ERR +K A L PE KGA +A +++LRL DGSR+ F S P+ + DWAD GV+++A L S+ P+ SF P D+ +T EE+GL +L VE++ A D D
Sbjct: 372 DRERRVQKQASL----PEPLPKGAPESA-SIVLRLPDGSRLAYCFASSAPLEVLFDWADANGVNINAACLVSSYPRKSFKWPEDAKLTFEESGLSPSCMLLVEERLDVAVDDDD 480
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A152AA02_9MYCE (UAS domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152AA02_9MYCE) HSP 1 Score: 71.6 bits (174), Expect = 2.720e-10 Identity = 100/319 (31.35%), Postives = 155/319 (48.59%), Query Frame = 1
Query: 1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKA-LADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVV--NSASATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVD-LDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
HP F S+ +A A + ++ L+YI + K + CK L E EFIDS++V+W +S +A + A + P+LG++ NS S + T + + S V++ Q++S M + E+ L V +EQ + + + I E+ E Y SLK D +E XXXXXXXXXXXX XX E ++R+E K QEP K A ++L+DG+RI+R FL++D +G ++D+ D + + +D L ++ PK S + TI E GL ALLF+ +K
Sbjct: 59 HPSFRQGSYNEAVSFAKSKFKILLIYIHSSKHPNSQQ------FCKEILFTREFKEFIDSTYVIWACDISTSIGFKVFNA-----MRASTFPYLGMLCCNSISGLTQGTQTKIEDFSGVSLQL-----PRDQIMSNMTGIYEIYGPHLVVAKSEQDQREQDRFIRQEQDEAYLISLKQDQEKERLXXXXXXXXXXXXXXXXXXEXXRLQKESEMLDRKESKKIRFEQEPTGPVSKVA--------IKLSDGTRIQRNFLKTDTIGDIMDYIDTKIQEPIDNYILMTSYPKKSLMN---LDKTIFEEGLFPDALLFLSEK 350
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: L8GRC1_ACACA (UBX domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRC1_ACACA) HSP 1 Score: 60.8 bits (146), Expect = 3.610e-7 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 646 EKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQ---GVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVE 939
++K + L EP E + + A T+ +RL DGSR+ RRF SD + + D+ DV G++L + L + P+ +HP ++ +TIEEAGL QALLFV+
Sbjct: 125 DRKRSRLPSEPREGSER-----AYTIAIRLPDGSRLTRRFRVSDTIRSIYDFVDVNEPAGLELGSYHLVTNYPRQ--AHP-ENDVTIEEAGLEAQALLFVQ 217
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A7S3E3J3_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E3J3_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 9.760e-7 Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 640 RREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWAD-VQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
RR +++ + +EPP +G+E +++RL DGSRI+RRFL+ D + V ++ D ++ D KL S P+ F G T+EEAGL Q LF++ +
Sbjct: 34 RRRERSESIPEEPPLEG-EGSEGVV-KILVRLPDGSRIQRRFLKGDKVSAVYNFVDSLESNDCYNYKLVSNFPRRVFDE-GTLSQTLEEAGLSPQGSLFLQSE 133
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A1Z5JVV9_FISSO (UBX domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVV9_FISSO) HSP 1 Score: 61.2 bits (147), Expect = 1.100e-6 Identity = 100/333 (30.03%), Postives = 156/333 (46.85%), Query Frame = 1
Query: 1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDS---------SFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSASATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDP----MGKVLDWADVQGVDLDAQKLSSTMP-KASFSHPGD-SGMTIEEAGLGRQALLFVEQKPKE 954
+P S DA + A ++RL LV I + + AA D ++ EVA+ + SF++W S+ ++ + AAKR+ P V+ A++ T ++ HHCNPPP+A+ M SW+ + + KNL + + Q + E I ERVEGY S+ + R++ E+ XXXXXXXXXXXXXXXXXE +++R AE P+ AV + TL +R ADG+ +R+F DP + V +W DV + + +T+ K +F + ++ E G G+ V + E
Sbjct: 199 YPAIEGGSIQDALQLARSQSRLLLVLIPSNRPDRQTAA--DKTAIESFLSVEVAKMAEKPAHKSIPTPSFLLW-----SAKAKSPEAVVAAKRLNLEPNPKRPVLLVATSKQASTTA---SCQVLSQHHCNPPPNATTMASWLNTIRKRHKNLYQ----KMQHAQKELQIAQERVEGYRTSIVQERQRQIDEQ--------XXXXXXXXXXXXXXXXXEAIKQRR---AEFSATLPDPAV-----GSMTLAVRFADGTSHQRQF---DPETATLETVFNWVDVVAQQEREKVVLTTLNGKQTFKWEEEHKTRSLGEMGWGKMVAFRVTEATSE 498 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1309.2339.1 >prot_E-fasciculatus_F_contig1309.2339.1 ID=prot_E-fasciculatus_F_contig1309.2339.1|Name=mRNA_E-fasciculatus_F_contig1309.2339.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=346bp HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADback to top mRNA from alignment at E-fasciculatus_F_contig1309:14454..18602- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1309.2339.1 ID=mRNA_E-fasciculatus_F_contig1309.2339.1|Name=mRNA_E-fasciculatus_F_contig1309.2339.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4149bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1309:14454..18602- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1309:14454..18602- >mRNA_E-fasciculatus_F_contig1309.2339.1 ID=mRNA_E-fasciculatus_F_contig1309.2339.1|Name=mRNA_E-fasciculatus_F_contig1309.2339.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2076bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1309:14454..18602- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |