mRNA_E-fasciculatus_F_contig1309.2339.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1309.2339.1
Unique NamemRNA_E-fasciculatus_F_contig1309.2339.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A6H5JRG4_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG4_9PHAE)

HSP 1 Score: 572 bits (1475), Expect = 8.470e-202
Identity = 324/345 (93.91%), Postives = 326/345 (94.49%), Query Frame = 1
Query:    1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSASATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGTSDETEVCIAAADDEDTERE 1035
            HPKFN+KSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQR AASAAAAKRVGARSLPFLGVVNSAS TDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEA XXXXXXXXXXXXX       EDVERREKKAAELGQEPPESAVKGAEA AATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQ+LSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPK ATGDSDGT DE E   AAA DE TERE
Sbjct:  166 HPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRVAASAAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAEXXXXXXXXXXXXXVLEAKQREDVERREKKAAELGQEPPESAVKGAEAKAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKGATGDSDGTVDEAEAA-AAAGDEGTERE 509          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: D7FVT5_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT5_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 3.910e-131
Identity = 210/241 (87.14%), Postives = 214/241 (88.80%), Query Frame = 1
Query:  313 MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGTSDETEVCIAAADDEDTERE 1035
            MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKK+LLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEA                     EDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQ+LSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGT D+TE   AAA DED E+E
Sbjct:    1 MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKSLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAERARLAEEQRVAQEALEAKLREDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGTVDDTEAA-AAAGDEDAEQE 240          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A835Z0S3_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S3_9STRA)

HSP 1 Score: 165 bits (418), Expect = 6.230e-44
Identity = 118/319 (36.99%), Postives = 172/319 (53.92%), Query Frame = 1
Query:    1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSASATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSS----TMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
            HP F + ++  ATE A   N+  LV++ +EKG  GK ++ DDAI ++  DP V  FI+  F+++   G S +      A AA+R GA+SLP+LGV+         T+ +  +R+ V +HHCNPPPSA  +V WM+++LE+K  +LE +  E  RL  E  +  ER +GY++++  D  +  +E+ E A               XXXXXX            LG EP      GA A A  + LRL DG R RRRFL SD   ++ DWADV GV+L+A +LS        + +     + G T+E AGL  + L+ VE +
Sbjct:   82 HPIFFEGTYKQATEAALRANKFTLVFLTSEKG--GKKSRADDAIARSFTDPAVISFINEHFILFAAAGPSPS-----GADAARRTGAKSLPYLGVIR--------TVAKDSKRALVGLHHCNPPPSAGGLVKWMSQLLEVKGGVLEADKTELARLAVEANLAKERQKGYAEAVMVDQKQIRKEKREAAAKAKEEAERLAAEAAXXXXXXXXXXXXXXXXXXLGDEP----AAGAAAAAVEVALRLPDGRRERRRFLLSDDTERLYDWADVLGVELEASRLSRGGVRRGQEGAVDLAAEQGKTLEAAGLTGRVLVLVEAR 381          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A7S3EE78_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE78_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 1.530e-15
Identity = 95/322 (29.50%), Postives = 148/322 (45.96%), Query Frame = 1
Query:    1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICK-ALADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSASA-TDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARV-----LELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
            HP+F + ++ +A   A  R +  LV++ +E              C+  L   EV  +ID + + W  G  S     A      + +G  + PF+ ++ S    +D +TL                   A   + W+  +       L +  L VE  ++ R      +  ++   Y ++L+ D  RE   +E              XXXXXXXXXX  VERRE K   LG+EP     KG   T  T+ LRL DG R+ RRFL SD +  + DWAD+ GV ++   L S+ P+ ++ +P D+  T+EEAGL +  +L VE++
Sbjct:  151 HPRFFEGTYLEALAAAGARFQFLLVFLHSEMHPASVR------FCRQVLGSREVIRYIDENVIFWARGIASPEGYRAQ-----RLLGVTTYPFVALITSPPGRSDGVTLSEYNS-------------DAGDFLQWLQTMSARFGTTLTRRRLHVEERDEAR-----QLREQQDREYHETLEADRRREQAAKEAAEQAAEQERLKREXXXXXXXXXXXLVERREGKRVALGEEPE----KGPGVT--TIGLRLPDGKRVDRRFLVSDKVAILFDWADINGVSIEHAALVSSFPRRTYQYPEDADKTLEEAGLSQGTMLLVEER 437          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A5J4Z6R3_PORPP (FAS-associated factor 2-B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6R3_PORPP)

HSP 1 Score: 81.6 bits (200), Expect = 1.950e-13
Identity = 107/325 (32.92%), Postives = 153/325 (47.08%), Query Frame = 1
Query:    1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKA-LADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARS------LPFLGVVNSASATDKMTLERKLERSTVAMHHCNP---PPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
            H +F   S   A  TA    +  LVYI  E        +  ++ C++ L D +V  FID +F+ W           AAS   A+ V ARS      LP L +V             +     +AM   N    P  A+ +  WM RV E     L     +Q+  +    +  ++ E + ++L++             XXXXXXXXXXXXXXXXXXXXX       +K   LG+EPP        A  A+++LR+ DGSR  RRFLR   +  + DWAD  GV++    L S+ P+ +F +P D  M+I EAGL   A+L +E++
Sbjct:  167 HARFTRTSLVQALRTAGREYKFALVYIHDEN------REACNSFCRSVLQDGQVIRFIDEAFIFW-----------AASTRFAETVQARSEFRLTHLPALAIVEGHPT--------RPPGRVIAMKQANAFGGPMDAAGVFQWMQRVQERYGVSLISARIQQEERETNRLLRQQQDEEFQRALEEXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQELLGEEPPAQG-----AVTASVVLRMPDGSRNTRRFLRDTKLEMLFDWADTLGVEIGQALLVSSYPRRAFKYPEDKDMSIAEAGLTPSAMLLIEER 454          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A7S0ZCT7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCT7_9RHOD)

HSP 1 Score: 79.0 bits (193), Expect = 1.750e-12
Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 1
Query:  631 DVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSD 972
            D ERR +K A L    PE   KGA  +A +++LRL DGSR+   F  S P+  + DWAD  GV+++A  L S+ P+ SF  P D+ +T EE+GL    +L VE++   A  D D
Sbjct:  372 DRERRVQKQASL----PEPLPKGAPESA-SIVLRLPDGSRLAYCFASSAPLEVLFDWADANGVNINAACLVSSYPRKSFKWPEDAKLTFEESGLSPSCMLLVEERLDVAVDDDD 480          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A152AA02_9MYCE (UAS domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152AA02_9MYCE)

HSP 1 Score: 71.6 bits (174), Expect = 2.720e-10
Identity = 100/319 (31.35%), Postives = 155/319 (48.59%), Query Frame = 1
Query:    1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKA-LADPEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVV--NSASATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVD-LDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
            HP F   S+ +A   A  + ++ L+YI + K    +        CK  L   E  EFIDS++V+W     +S      +A     + A + P+LG++  NS S   + T  +  + S V++          Q++S M  + E+    L V  +EQ + + +  I  E+ E Y  SLK D  +E        XXXXXXXXXXXX XX      E ++R+E K     QEP     K A        ++L+DG+RI+R FL++D +G ++D+ D +  + +D   L ++ PK S  +      TI E GL   ALLF+ +K
Sbjct:   59 HPSFRQGSYNEAVSFAKSKFKILLIYIHSSKHPNSQQ------FCKEILFTREFKEFIDSTYVIWACDISTSIGFKVFNA-----MRASTFPYLGMLCCNSISGLTQGTQTKIEDFSGVSLQL-----PRDQIMSNMTGIYEIYGPHLVVAKSEQDQREQDRFIRQEQDEAYLISLKQDQEKERLXXXXXXXXXXXXXXXXXXEXXRLQKESEMLDRKESKKIRFEQEPTGPVSKVA--------IKLSDGTRIQRNFLKTDTIGDIMDYIDTKIQEPIDNYILMTSYPKKSLMN---LDKTIFEEGLFPDALLFLSEK 350          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: L8GRC1_ACACA (UBX domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRC1_ACACA)

HSP 1 Score: 60.8 bits (146), Expect = 3.610e-7
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  646 EKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQ---GVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVE 939
            ++K + L  EP E + +     A T+ +RL DGSR+ RRF  SD +  + D+ DV    G++L +  L +  P+   +HP ++ +TIEEAGL  QALLFV+
Sbjct:  125 DRKRSRLPSEPREGSER-----AYTIAIRLPDGSRLTRRFRVSDTIRSIYDFVDVNEPAGLELGSYHLVTNYPRQ--AHP-ENDVTIEEAGLEAQALLFVQ 217          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A7S3E3J3_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E3J3_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 9.760e-7
Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 1
Query:  640 RREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWAD-VQGVDLDAQKLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 945
            RR +++  + +EPP    +G+E     +++RL DGSRI+RRFL+ D +  V ++ D ++  D    KL S  P+  F   G    T+EEAGL  Q  LF++ +
Sbjct:   34 RRRERSESIPEEPPLEG-EGSEGVV-KILVRLPDGSRIQRRFLKGDKVSAVYNFVDSLESNDCYNYKLVSNFPRRVFDE-GTLSQTLEEAGLSPQGSLFLQSE 133          
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Match: A0A1Z5JVV9_FISSO (UBX domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVV9_FISSO)

HSP 1 Score: 61.2 bits (147), Expect = 1.100e-6
Identity = 100/333 (30.03%), Postives = 156/333 (46.85%), Query Frame = 1
Query:    1 HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDS---------SFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSASATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDP----MGKVLDWADVQGVDLDAQKLSSTMP-KASFSHPGD-SGMTIEEAGLGRQALLFVEQKPKE 954
            +P     S  DA + A  ++RL LV I + +     AA  D    ++    EVA+  +          SF++W     S+  ++  +  AAKR+     P   V+  A++    T         ++ HHCNPPP+A+ M SW+  + +  KNL +    + Q  + E  I  ERVEGY  S+  +  R++ E+        XXXXXXXXXXXXXXXXXE +++R    AE     P+ AV      + TL +R ADG+  +R+F   DP    +  V +W DV       + + +T+  K +F    +    ++ E G G+     V +   E
Sbjct:  199 YPAIEGGSIQDALQLARSQSRLLLVLIPSNRPDRQTAA--DKTAIESFLSVEVAKMAEKPAHKSIPTPSFLLW-----SAKAKSPEAVVAAKRLNLEPNPKRPVLLVATSKQASTTA---SCQVLSQHHCNPPPNATTMASWLNTIRKRHKNLYQ----KMQHAQKELQIAQERVEGYRTSIVQERQRQIDEQ--------XXXXXXXXXXXXXXXXXEAIKQRR---AEFSATLPDPAV-----GSMTLAVRFADGTSHQRQF---DPETATLETVFNWVDVVAQQEREKVVLTTLNGKQTFKWEEEHKTRSLGEMGWGKMVAFRVTEATSE 498          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1309.2339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRG4_9PHAE8.470e-20293.91UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVT5_ECTSI3.910e-13187.14UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z0S3_9STRA6.230e-4436.99UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3EE78_9RHOD1.530e-1529.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z6R3_PORPP1.950e-1332.92FAS-associated factor 2-B n=1 Tax=Porphyridium pur... [more]
A0A7S0ZCT7_9RHOD1.750e-1242.11Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A152AA02_9MYCE2.720e-1031.35UAS domain-containing protein n=1 Tax=Tieghemostel... [more]
L8GRC1_ACACA3.610e-739.60UBX domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A7S3E3J3_9CHLO9.760e-735.92Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
A0A1Z5JVV9_FISSO1.100e-630.03UBX domain-containing protein n=1 Tax=Fistulifera ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1309contigE-fasciculatus_F_contig1309:14454..18602 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.7
Seed ortholog evalue1.1e-104
Seed eggNOG ortholog2880.D7FVT5
EggNOG OGs2C9E8@1,2SAZI@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1038
Cds size1038
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1309.2339.1prot_E-fasciculatus_F_contig1309.2339.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1309 14454..18602 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927813.332445-CDS-E-fasciculatus_F_contig1309:14453..146331622927813.332445-CDS-E-fasciculatus_F_contig1309:14453..14633Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 14454..14633 -
1695995705.5219731-CDS-E-fasciculatus_F_contig1309:14453..146331695995705.5219731-CDS-E-fasciculatus_F_contig1309:14453..14633Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 14454..14633 -
1622927813.3447907-CDS-E-fasciculatus_F_contig1309:15363..155801622927813.3447907-CDS-E-fasciculatus_F_contig1309:15363..15580Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 15364..15580 -
1695995705.534451-CDS-E-fasciculatus_F_contig1309:15363..155801695995705.534451-CDS-E-fasciculatus_F_contig1309:15363..15580Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 15364..15580 -
1622927813.354282-CDS-E-fasciculatus_F_contig1309:15956..161391622927813.354282-CDS-E-fasciculatus_F_contig1309:15956..16139Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 15957..16139 -
1695995705.5533426-CDS-E-fasciculatus_F_contig1309:15956..161391695995705.5533426-CDS-E-fasciculatus_F_contig1309:15956..16139Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 15957..16139 -
1622927813.570793-CDS-E-fasciculatus_F_contig1309:16775..168461622927813.570793-CDS-E-fasciculatus_F_contig1309:16775..16846Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 16776..16846 -
1695995705.5628126-CDS-E-fasciculatus_F_contig1309:16775..168461695995705.5628126-CDS-E-fasciculatus_F_contig1309:16775..16846Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 16776..16846 -
1622927813.5801876-CDS-E-fasciculatus_F_contig1309:17406..176371622927813.5801876-CDS-E-fasciculatus_F_contig1309:17406..17637Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 17407..17637 -
1695995705.572274-CDS-E-fasciculatus_F_contig1309:17406..176371695995705.572274-CDS-E-fasciculatus_F_contig1309:17406..17637Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 17407..17637 -
1622927813.5895205-CDS-E-fasciculatus_F_contig1309:18446..186021622927813.5895205-CDS-E-fasciculatus_F_contig1309:18446..18602Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 18447..18602 -
1695995705.5808752-CDS-E-fasciculatus_F_contig1309:18446..186021695995705.5808752-CDS-E-fasciculatus_F_contig1309:18446..18602Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1309 18447..18602 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1309.2339.1

>prot_E-fasciculatus_F_contig1309.2339.1 ID=prot_E-fasciculatus_F_contig1309.2339.1|Name=mRNA_E-fasciculatus_F_contig1309.2339.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=346bp
HPKFNDKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALAD
PEVAEFIDSSFVMWVPGGKSSAQRAAASAAAAKRVGARSLPFLGVVNSAS
ATDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELA
EQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAERARLAEEERLA
QEALEAKQREDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSR
IRRRFLRSDPMGKVLDWADVQGVDLDAQKLSSTMPKASFSHPGDSGMTIE
EAGLGRQALLFVEQKPKEATGDSDGTSDETEVCIAAADDEDTERE*
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mRNA from alignment at E-fasciculatus_F_contig1309:14454..18602-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1309.2339.1 ID=mRNA_E-fasciculatus_F_contig1309.2339.1|Name=mRNA_E-fasciculatus_F_contig1309.2339.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4149bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1309:14454..18602- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACCCCAAGTTCAACGATAAGTCCTTCGGCGACGCAACGGAGACGGCGTG GGGGCGCAACCGGCTGTGCTTGGTCTACATCGCGGCCGAGAAAGGGAGCG GCGGCAAGGCGGCCAAGGTCGATGACGCCATCTGCAAGGCCCTAGCAGAC CCGGAGGTGGGAGAGATGGGGCGGGTGCGCCGCCGGGCGGGCGGCGTACC GTAGGTGACATGACACAAGATAACACACCCCCTGAAGCTGTTTTCTCTTT TCAAAGCTCGATTTCTCCACAACAGAATGACTGGCAGCGCCGAAAATGGC GGCGTTGAAGCCGTCTGGTCGAGAGATTTCCGAGAACTTTCCGATAACGT GTCGTTTCATTTCTGCATCTTCGTCGTGGAGTAATCTACCTTTGAAATCA GTCTAGGGGGTGTGGTATCTTGTGTCATTTCACATACGGTATGACCCCTT ATGTGCGACAAATGTTAATGTTTCGCCAGAGAAAACGTGCAGCACCCGAG TGTGTGTAGGCTTATAAGGCTTGTCATGCAAGCTGCTGCTCCATGTTTTG GCTATAATAGTCGGGCTTGGTTTGTCCCCCGTGGTGCTTGCTCTAAGGCG TCACAGAAATTGTCCCTCAAACACATATGTTCGGACTTGGCAACATCTAC ACGTCTACCGCTCCCATGAGCGTTCGAATTGATATTGACACAAGTGCCAT CCGTTTCTCGTACGGCCCTCACGATACGTCCGTGCCGTATTTGACGCATC ATGCCCACTGGAAAGAGTGTGTTTGATTCCACTCGAAGCCGTAGCCGTTG TTCCTCTATCTATATTTCCCCCACTCTCTTTACAACGCCCTCCCCCCGCA CCCGCCGGCCCACTTGCGCTCGATCACGTTCCAACCAATGGACAACCAAC CACACACCCCTCATCTCCAGTCCCGCACCCCTCCCCCATCCTCCCGCCAA TGTACACGGCTCCAGGTAGCCGAATTCATCGACTCGAGCTTCGTCATGTG GGTCCCCGGGGGGAAGAGCTCCGCCCAGCGCGCGGCGGCATCGGCGGCGG CGGCCAAGCGCGTAGGCGCGCGGTCCCTCCCCTTCCTCGGGGTGGTGAAC AGCGCCTCGGCAACCGACAAGATGACGCTGGAGAGGAAGCTCGAGCGATC GACGGTGGCGATGCACCACTGCAACCCCCCGCCCTCCGCGAGCCAGGTGA GGCGTTACTTCTGCCGGCGGCATGTCGGTAAAGTGGCAGCTTGTGTGTTT TTTTTTTTTCATGATGGAACGTTCGTGTGAAAAGGCAAGAGGGGGTTGCT GGTTGCTCTGGTCCCGTTGGGTGCAAGTCAAAGAGGCACTTTCAGGCTCC GGCGAGAGAGGGTGTTTTCATTCTCCCGCTGCTTGTTGATATGACTTTGT ACACTGGGTTGGTCCGCTAGGACATACGAAGGACTGCAGACGATGTGTAT ATTTGAACTTCGTGCAGACTACGTTCTATTCAGGTGCGCAGGCTTGACCA GTGCTAAACCAGCACCCCCAATACTGTCGACAAACTTTGCTGCCATAGCA CGTACTGTGTGCATTGGATCGAGGTGAGCTTGCAAAGCTTGAAGCATGAG GGTTCGATTGTCCTTTACCGGCCGGTTTTCTTCAATGCTCGGGGTCTGTT GTTTCCGTCCGAGACAAGAATAACAACATCAAATATCGCCACGCACCCAC GGCTTTCGCACACCGCTGGCTCCGCCGTAAATCTTGTGTCTGTTTTTTTT TTGCAGATGGTAAGCTGGATGGCCCGCGTACTGGAGCTCAAGAAGAACCT GCTTGAAGTCGAGCTCGCGGAGCAACAGTGAGTCACAGCGTCGTCCGCCT AAACGTTTTCAACGTCTACCGCCTTTGCTAAGTCGCTCAGCAGCAGCGTA CTTTCCGCGTGCCCCGCCCCCCCGCGCGCTATACCTTCTGAAGTACCGAG GTACACCGTCTCTACCTCAACCCGTTGGTATAGCCCTGATCTAGGCCTGT CTTGCAGGGCTTGGACGTCAAAAGGCTGAGGTGGTAATGAGACTTGCACC TCTTCCATATGATCACCTTGCGCTGTGAGGAACTGTTGTCCGACCACAGG TGAAGGTTGTTGCTCTCCCGTTGTCCTTCCTTTTGATAGAATCATTTGTA TCTCCTCGCATGCACTCCGTTCCGCCAGAATCCACACCAGGCGATTGCCA CACCAATCGCACGCGAACGGACCCGATCGCACACTGAACAGAAGAGCACA CACAAGACTCGGCATAAAGCCGCATTCTCGCGTGAAGCCCTGGCAAAACA TCCGACGACGCCAAGTAACCATGGCAACGCACCATCACAATGCTACCTCC AAACACCAAACATGATCCCCCCATCGCCATTTCCTCTTGACCTCCCCGCC CCCCCCGCTGCACTCACTACGGTGTCCGAACCTCCTGTGAATCGTGAAAT ATGTGTTCATCAGGCGATTAAAAGACGAAGACACCATTTACACGGAGCGA GTGGAAGGGTACTCCAAGTCTCTCAAGGACGACGCGCTGCGGGAGGTGAG GGAGAGGGAGGAGGAGGCCGAGCGGGCAAGGCTGGCGGAGGAGGAGAGGC TGGCGCAAGAAGCCCTCGAGGCGAAGCAGCGGGAGGACGTGGAACGGTGC GTACAGTAGCGAGCTGTTGCCGCTCTTCGTCGTGCTGCTCAAGTTCCCAC TCGGCGTGGGGTGGTGCAGTGATGTTGCCGTGGAACAGACGCAGTCACAG GCTCTCACCACCCATGCAAGTGCGAAACCCTGCTCGACTGTGCTGCCACG GAGGGCCGCGCACGGCCTTCGGTCCCTTCATAACAGTAGTCAACGTACTG TAGCTCCGAGGTCTCGCTCGGTGTAACACCGCCCTTTTTGTTCCCCTGAA ACTTGAAAAACTTCCACCACTGGCATCAGTGCCTCTCGCCTACCCGTGAC ACTCATGTGACTTCGACTATATGTTGGCTATGAACCCTGTGCTGCCAACT GCCGCAAACCCAAACGGCGCAGACGAGAAAAGAAGGCCGCGGAGCTGGGG CAAGAGCCGCCAGAGTCGGCCGTGAAGGGGGCTGAGGCCACGGCAGCGAC GCTCATGCTGCGGCTCGCGGACGGCTCGCGGATCCGGCGACGGTTCCTGA GGTCGGACCCCATGGGGAAGGTGCTCGACTGGGCGGACGTGCAGGGGGTG GACCTAGACGCGCAGAAGTTATCCTCCACGATGCCAAAGGTGAGGGACGA GAGACACGCTGCTTTAGGCTTTAGGCTGATGCCACGTTCAGGGAGTTCGT GATATACTCCGTAGTCATCGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCTGTGATCGTTGTGCGCTTGTAGTCGGCCCGTTGT GTCATCGAGGTGGAGAGGTGGCGTGCGGTGTGGTATCGGCTAGGATACCC TTTTATTGTCGTGGACGCGCCTGGGTTCATGAATGCCAAAAGCCGCCCAG CTGTCTCTACGTGTGTATGGCTCGGAAAAATGCAGGCTGGAGGGAAAATG GGGGTTGAATGCAACGATTCGGGCTGTGCGTGTACGGAACGACGAATGCT CGTTCAGTTTTCAGCGTCATTTGGATCCTGAACACGAATCTCAACAACAA TGCGTGAAGCACCGCTAGAGTAGGTTCCGGGCCACGCCGCCGGACACCCA CCGGACTACTGCCTGTTCGACTGTTCGACGACCGAAAGGAGATTGCCCAT ATTGTGGATTGATACATTACCGGCGGTGTGGGTACCCACGTTGCTCTTAT CCGGGTCTACTTTCACAAGAAGGCAACAAACGTGTGCAAATTGTGCGGAT TCATCTCAGTTGGTATCCTGGCCTGGCAGATTCAGACCCGTGGACGGCTA TTCGAGGTTTGAAGTTTGAAATGCTTCGTTGACCACATGGAACATTGCTT GCTTCTTGCACGTGGCCAGGCGTCTTTCTCTCACCCCGGTGACTCGGGAA TGACGATCGAGGAGGCCGGCCTCGGAAGGCAAGCGCTGCTGTTTGTGGAG CAGAAGCCCAAGGAGGCTACCGGAGATTCTGATGGGACGTCGGATGAGAC GGAAGTATGCATAGCAGCAGCTGACGACGAGGACACTGAGCGCGAGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1309:14454..18602-

>mRNA_E-fasciculatus_F_contig1309.2339.1 ID=mRNA_E-fasciculatus_F_contig1309.2339.1|Name=mRNA_E-fasciculatus_F_contig1309.2339.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2076bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1309:14454..18602- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACCCCAAGTTCAACGATAAGTCCTTCGGCGACGCAACGGAGACGGCGTG
GGGGCGCAACCGGCTGTGCTTGGTCTACATCGCGGCCGAGAAAGGGAGCG
GCGGCAAGGCGGCCAAGGTCGATGACGCCATCTGCAAGGCCCTAGCAGAC
CCGGAGCACCCCAAGTTCAACGATAAGTCCTTCGGCGACGCAACGGAGAC
GGCGTGGGGGCGCAACCGGCTGTGCTTGGTCTACATCGCGGCCGAGAAAG
GGAGCGGCGGCAAGGCGGCCAAGGTCGATGACGCCATCTGCAAGGCCCTA
GCAGACCCGGAGGTAGCCGAATTCATCGACTCGAGCTTCGTCATGTGGGT
CCCCGGGGGGAAGAGCTCCGCCCAGCGCGCGGCGGCATCGGCGGCGGCGG
CCAAGCGCGTAGGCGCGCGGTCCCTCCCCTTCCTCGGGGTGGTGAACAGC
GCCTCGGCAACCGACAAGATGACGCTGGAGAGGAAGCTCGAGCGATCGAC
GGTGGCGATGCACCACTGCAACCCCCCGCCCTCCGCGAGCCAGGTAGCCG
AATTCATCGACTCGAGCTTCGTCATGTGGGTCCCCGGGGGGAAGAGCTCC
GCCCAGCGCGCGGCGGCATCGGCGGCGGCGGCCAAGCGCGTAGGCGCGCG
GTCCCTCCCCTTCCTCGGGGTGGTGAACAGCGCCTCGGCAACCGACAAGA
TGACGCTGGAGAGGAAGCTCGAGCGATCGACGGTGGCGATGCACCACTGC
AACCCCCCGCCCTCCGCGAGCCAGATGGTAAGCTGGATGGCCCGCGTACT
GGAGCTCAAGAAGAACCTGCTTGAAGTCGAGCTCGCGGAGCAACAATGGT
AAGCTGGATGGCCCGCGTACTGGAGCTCAAGAAGAACCTGCTTGAAGTCG
AGCTCGCGGAGCAACAGCGATTAAAAGACGAAGACACCATTTACACGGAG
CGAGTGGAAGGGTACTCCAAGTCTCTCAAGGACGACGCGCTGCGGGAGGT
GAGGGAGAGGGAGGAGGAGGCCGAGCGGGCAAGGCTGGCGGAGGAGGAGA
GGCTGGCGCAAGAAGCCCTCGAGGCGAAGCAGCGGGAGGACGTGGAACGG
CGATTAAAAGACGAAGACACCATTTACACGGAGCGAGTGGAAGGGTACTC
CAAGTCTCTCAAGGACGACGCGCTGCGGGAGGTGAGGGAGAGGGAGGAGG
AGGCCGAGCGGGCAAGGCTGGCGGAGGAGGAGAGGCTGGCGCAAGAAGCC
CTCGAGGCGAAGCAGCGGGAGGACGTGGAACGACGAGAAAAGAAGGCCGC
GGAGCTGGGGCAAGAGCCGCCAGAGTCGGCCGTGAAGGGGGCTGAGGCCA
CGGCAGCGACGCTCATGCTGCGGCTCGCGGACGGCTCGCGGATCCGGCGA
CGGTTCCTGAGGTCGGACCCCATGGGGAAGGTGCTCGACTGGGCGGACGT
GCAGGGGGTGGACCTAGACGCGCAGAAGTTATCCTCCACGATGCCAAAGA
CGAGAAAAGAAGGCCGCGGAGCTGGGGCAAGAGCCGCCAGAGTCGGCCGT
GAAGGGGGCTGAGGCCACGGCAGCGACGCTCATGCTGCGGCTCGCGGACG
GCTCGCGGATCCGGCGACGGTTCCTGAGGTCGGACCCCATGGGGAAGGTG
CTCGACTGGGCGGACGTGCAGGGGGTGGACCTAGACGCGCAGAAGTTATC
CTCCACGATGCCAAAGGCGTCTTTCTCTCACCCCGGTGACTCGGGAATGA
CGATCGAGGAGGCCGGCCTCGGAAGGCAAGCGCTGCTGTTTGTGGAGCAG
AAGCCCAAGGAGGCTACCGGAGATTCTGATGGGACGTCGGATGAGACGGA
AGTATGCATAGCAGCAGCTGACGACGAGGACACTGAGCGCGAGTGAGCGT
CTTTCTCTCACCCCGGTGACTCGGGAATGACGATCGAGGAGGCCGGCCTC
GGAAGGCAAGCGCTGCTGTTTGTGGAGCAGAAGCCCAAGGAGGCTACCGG
AGATTCTGATGGGACGTCGGATGAGACGGAAGTATGCATAGCAGCAGCTG
ACGACGAGGACACTGAGCGCGAGTGA
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