mRNA_E-fasciculatus_F_contig13065.2322.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13065.2322.1
Unique NamemRNA_E-fasciculatus_F_contig13065.2322.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: D8LNI3_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNI3_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 9.080e-105
Identity = 166/170 (97.65%), Postives = 168/170 (98.82%), Query Frame = 1 
Query:    1 FECFSQHPETGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSKTGK 510
            F+C  QHPETGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVAD+VMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSKTGK
Sbjct:   89 FKCI-QHPETGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADTVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSKTGK 257
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: A0A836CK58_9STRA (Heat shock protein 70 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK58_9STRA)

HSP 1 Score: 223 bits (568), Expect = 4.610e-65
Identity = 107/163 (65.64%), Postives = 133/163 (81.60%), Query Frame = 1 
Query:   16 QHPETGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSKT 504
            +HPETGGVG+ V Y +   +F+ EQ++A ML K   IAKAAN+ + VA++V++IPGWYTDAMR+AM+NA  I G+NCLRL+HE TATALAYGIY+SAKGEFS+   + VLFLD+GHSSF ASVVTF Q +L+VKS  +D  LGGRDMDWAIAQH AD+FK+KT
Sbjct:   93 KHPETGGVGVRVTYNEESVLFSVEQVVAMMLNKAADIAKAANSDLSVAEAVISIPGWYTDAMRHAMLNAVQIAGLNCLRLMHESTATALAYGIYRSAKGEFSDGNARKVLFLDLGHSSFCASVVTFTQAALSVKSTCYDRNLGGRDMDWAIAQHLADDFKAKT 255
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: A0A8K1C8P5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8P5_PYTOL)

HSP 1 Score: 185 bits (470), Expect = 3.990e-51
Identity = 90/158 (56.96%), Postives = 118/158 (74.68%), Query Frame = 1 
Query:   28 TGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSK 501
            +G VGI +NY D    FT EQI+A ++ K+ AIA AAN G+  A +V++ PG+YTDA R A++N+C I G+NCLRL++EHTA ALAYGIYKSA+  F E EPQ V+F+D+GH+S++ S+V FVQG L VKSA FD  LGGRD D A+A+  A EF +K
Sbjct:  265 SGDVGIVLNYNDEQVTFTCEQIVAMVINKMKAIAAAANEGVSPAYAVLSCPGFYTDAQRRALLNSCKIAGLNCLRLLNEHTAVALAYGIYKSARNLFHESEPQHVMFIDMGHASYTVSIVAFVQGKLQVKSATFDRFLGGRDFDQALAEDVAKEFNAK 422
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: A0A2D4BW29_PYTIN (Heat shock protein 70 putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW29_PYTIN)

HSP 1 Score: 183 bits (465), Expect = 2.420e-50
Identity = 91/157 (57.96%), Postives = 116/157 (73.89%), Query Frame = 1 
Query:   31 GGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSK 501
            G VGI +NY D    FT EQI+A +  K++AIA AAN G+  A +V++ PG+YTD  R A++NA  I G+NCLRL++EHTA ALAYGIYKSA+  F E EPQ V+F+D+GH+S++ SVV FVQG L VKSA FD  LGGRD D+A+AQ  A EF+ K
Sbjct:  878 GDVGIVLNYNDEQVTFTCEQIVAMIFNKMMAIAAAANEGVRPAYAVLSCPGFYTDVQRRALLNASKIAGLNCLRLLNEHTAIALAYGIYKSARXLFHESEPQHVMFIDMGHASYTVSVVAFVQGKLQVKSATFDRFLGGRDFDFALAQEVAQEFQGK 1034
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: A0A7S3XRT4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRT4_HETAK)

HSP 1 Score: 179 bits (453), Expect = 2.710e-50
Identity = 86/157 (54.78%), Postives = 115/157 (73.25%), Query Frame = 1 
Query:   37 VGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSKTG 507
            VG++V Y D  K    E ++A +L KL  +A  A++G+ VAD+V+A+P W+TDA R AM NAC I G++ LRL++E TA ALAYG +KSAKG F  ++P+ V+F+D+GHS +SA+V  FVQGSLTVK+ A+D  LGGRDMDWAI +H A EF  K G
Sbjct:   90 VGVKVAYNDGEKTLCVEHMVAMLLCKLADVAAKASDGVAVADAVVAVPSWFTDAHRRAMKNACEIAGLHVLRLLNETTAAALAYGAFKSAKGLFDPQKPKHVMFVDMGHSGYSATVAAFVQGSLTVKACAYDHNLGGRDMDWAIVEHLAAEFTKKHG 246
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: A0A0P1A9F2_PLAHL (Heat shock protein 70 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9F2_PLAHL)

HSP 1 Score: 179 bits (455), Expect = 2.350e-49
Identity = 90/158 (56.96%), Postives = 116/158 (73.42%), Query Frame = 1 
Query:   28 TGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSK 501
            +G VGI +NY D    F+ EQ++A +L K+  IA AAN G++ A  V++ PG+YTD  R A++NA  I G+NCLRLI+EHTA ALAYGIYKSA+  F E EPQ V+F+D+GH+S++ S+V FVQG LTVKSAAFD  LGGRD D AIA+  A +F  K
Sbjct:   96 SGDVGIVLNYNDEPVTFSCEQVVAMILNKMQNIASAANEGVNPAYCVLSCPGFYTDVQRRALLNATKIAGLNCLRLINEHTAIALAYGIYKSARNLFHESEPQHVMFIDLGHASYTVSIVAFVQGRLTVKSAAFDRFLGGRDFDMAIAKDVAAKFAEK 253
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: A0A484DZ84_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ84_BRELC)

HSP 1 Score: 179 bits (455), Expect = 2.400e-49
Identity = 89/158 (56.33%), Postives = 117/158 (74.05%), Query Frame = 1 
Query:   28 TGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSK 501
            +G VGI +NY D    F+ EQI+A +L K+ +IA AAN G++ A  V++ PG+YTD  R A++NA  I G+NCLRLI+EHTA ALAYGIYKSA+  F E EPQ+V+F+D+GH+S++ S+V FVQG LTVKSA +DS LGGRD D  IA+  A +F  K
Sbjct:   96 SGDVGIVLNYNDEPVTFSCEQIVAMILNKMQSIAAAANEGVNPAYCVLSCPGFYTDIQRRALLNATKIAGLNCLRLINEHTAIALAYGIYKSARNLFHESEPQYVMFIDLGHASYTVSIVAFVQGRLTVKSATYDSFLGGRDFDMVIAKDVAAKFAEK 253
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: A0A662YB12_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YB12_9STRA)

HSP 1 Score: 178 bits (451), Expect = 6.830e-49
Identity = 87/158 (55.06%), Postives = 119/158 (75.32%), Query Frame = 1 
Query:   28 TGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSK 501
            +G VG+ +NY D    F+ EQ++A +L K+ +IA AAN+ ++ A  V+++PG+YTD  R A++NA  I G+NCLRLI+EHTA ALAYGIYKSA+  F E EPQ V+F+D+GH+S++ S+V FVQG L+VKSAAFD  LGGRD D  IA+ AA +F +K
Sbjct:   59 SGDVGVVLNYNDEPVTFSCEQVVAMILNKMQSIAAAANDNVNPAYCVLSVPGFYTDVQRRALLNATKIAGLNCLRLINEHTAIALAYGIYKSARNLFHETEPQHVMFIDLGHASYTVSIVAFVQGRLSVKSAAFDRFLGGRDFDMVIAKDAAAKFAAK 216
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: A0A7S1C7W1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7W1_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.010e-48
Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 1 
Query:   25 ETGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSKTG 507
            E  G+GIEVNY D + V TPEQI+A +LTKL   A  AN G    D V+++P ++TDA R A+  A  + G+NCL+L++E TA ALAYGIYKSA+GEF   EP+ VLF+D+G SS +A+VV++VQG L VKS+  D + GGRD+D A+A+   D+FK+ TG
Sbjct:  113 EGDGIGIEVNYNDEVTVLTPEQILAALLTKLRTTAAGANPGATALDVVLSVPVYFTDAERRAVRQAAQVAGLNCLKLMNESTAVALAYGIYKSARGEFHATEPENVLFVDMGGSSLTATVVSYVQGRLVVKSSVSDRECGGRDVDLAVARWLHDQFKANTG 273
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BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Match: K3WV72_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV72_GLOUD)

HSP 1 Score: 177 bits (450), Expect = 1.110e-48
Identity = 86/158 (54.43%), Postives = 118/158 (74.68%), Query Frame = 1 
Query:   28 TGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGIDVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYKSAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGRDMDWAIAQHAADEFKSK 501
            +G VGI + Y D    F+ EQI+A +L K+ AIA AAN+G+    +V+++PG+YTD  R A++NA  I G+N LRLI+EHTA ALAYGIYKSA+  F E EPQ+ +F+D+GH+S++ S+V FVQG L VKSAA+D  LGGRD D+A+A+ AA +F+ K
Sbjct:   96 SGDVGIVLKYNDEDVTFSCEQIVAMVLNKMQAIAAAANDGVQPGYAVVSVPGYYTDVQRRALLNASKIAGLNTLRLINEHTAIALAYGIYKSARNMFHESEPQYTMFIDIGHASYTVSIVAFVQGKLQVKSAAYDRFLGGRDFDYALAKDAAKKFQEK 253
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13065.2322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNI3_ECTSI9.080e-10597.65Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CK58_9STRA4.610e-6565.64Heat shock protein 70 n=1 Tax=Tribonema minus TaxI... [more]
A0A8K1C8P5_PYTOL3.990e-5156.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BW29_PYTIN2.420e-5057.96Heat shock protein 70 putative n=1 Tax=Pythium ins... [more]
A0A7S3XRT4_HETAK2.710e-5054.78Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0P1A9F2_PLAHL2.350e-4956.96Heat shock protein 70 n=1 Tax=Plasmopara halstedii... [more]
A0A484DZ84_BRELC2.400e-4956.33Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A662YB12_9STRA6.830e-4955.06Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A7S1C7W1_9STRA1.010e-4853.42Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
K3WV72_GLOUD1.110e-4854.43Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13065contigE-fasciculatus_F_contig13065:49..3758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.0
Seed ortholog evalue4.8e-43
Seed eggNOG ortholog67593.Physo144810
Preferred nameHSPA4L
KEGG koko:K09485,ko:K09489
KEGG TC1.A.33
KEGG Pathwayko04141,ko04530,ko04612,map04141,map04530,map04612
GOsGO:0000166,GO:0000774,GO:0001085,GO:0001655,GO:0001822,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005811,GO:0005829,GO:0005844,GO:0005886,GO:0005911,GO:0006355,GO:0006357,GO:0006457,GO:0006458,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006897,GO:0006898,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007006,GO:0007275,GO:0007568,GO:0008092,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008340,GO:0009266,GO:0009405,GO:0009408,GO:0009506,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010259,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010941,GO:0015031,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0017038,GO:0017076,GO:0019219,GO:0019220,GO:0019222,GO:0022407,GO:0022409,GO:0022603,GO:0022607,GO:0023051,GO:0023057,GO:0030054,GO:0030139,GO:0030155,GO:0030234,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032092,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032872,GO:0032873,GO:0032879,GO:0032880,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033218,GO:0033365,GO:0033613,GO:0033674,GO:0034613,GO:0034622,GO:0035639,GO:0035690,GO:0035966,GO:0036094,GO:0042026,GO:0042221,GO:0042277,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042886,GO:0042981,GO:0043014,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043230,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0043393,GO:0043408,GO:0043409,GO:0043523,GO:0043524,GO:0043549,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045040,GO:0045184,GO:0045343,GO:0045345,GO:0045765,GO:0045766,GO:0045785,GO:0045859,GO:0045860,GO:0045893,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046634,GO:0046635,GO:0046686,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050730,GO:0050731,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051094,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051131,GO:0051133,GO:0051135,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051254,GO:0051338,GO:0051347,GO:0051493,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0055044,GO:0060205,GO:0060255,GO:0060341,GO:0060548,GO:0060589,GO:0060590,GO:0061024,GO:0061077,GO:0061097,GO:0061098,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070062,GO:0070201,GO:0070302,GO:0070303,GO:0070507,GO:0070585,GO:0070727,GO:0070887,GO:0071682,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072001,GO:0072594,GO:0072655,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090151,GO:0097159,GO:0097367,GO:0097708,GO:0098657,GO:0098772,GO:1900034,GO:1900407,GO:1900408,GO:1900744,GO:1901031,GO:1901032,GO:1901214,GO:1901215,GO:1901265,GO:1901298,GO:1901299,GO:1901342,GO:1901363,GO:1902175,GO:1902176,GO:1902531,GO:1902532,GO:1902680,GO:1902882,GO:1902883,GO:1903037,GO:1903039,GO:1903201,GO:1903202,GO:1903205,GO:1903206,GO:1903506,GO:1903508,GO:1903561,GO:1903747,GO:1903748,GO:1903750,GO:1903751,GO:1903753,GO:1903827,GO:1903828,GO:1904018,GO:1904950,GO:1990904,GO:2000026,GO:2000112,GO:2001023,GO:2001024,GO:2001038,GO:2001039,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.MreB/Mbl protein
EggNOG OGs3QAR8@4776,COG0443@1,KOG0103@2759
COG Functional cat.O
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Hectar predicted targeting categoryother localisation
Exons5
Model size534
Cds size534
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13065.2322.1prot_E-fasciculatus_F_contig13065.2322.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13065 49..3758 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927811.1570952-CDS-E-fasciculatus_F_contig13065:48..1831622927811.1570952-CDS-E-fasciculatus_F_contig13065:48..183Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 49..183 -
1695995704.599763-CDS-E-fasciculatus_F_contig13065:48..1831695995704.599763-CDS-E-fasciculatus_F_contig13065:48..183Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 49..183 -
1622927811.185558-CDS-E-fasciculatus_F_contig13065:815..8871622927811.185558-CDS-E-fasciculatus_F_contig13065:815..887Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 816..887 -
1695995704.6116807-CDS-E-fasciculatus_F_contig13065:815..8871695995704.6116807-CDS-E-fasciculatus_F_contig13065:815..887Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 816..887 -
1622927811.1973166-CDS-E-fasciculatus_F_contig13065:1569..16801622927811.1973166-CDS-E-fasciculatus_F_contig13065:1569..1680Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 1570..1680 -
1695995704.6204314-CDS-E-fasciculatus_F_contig13065:1569..16801695995704.6204314-CDS-E-fasciculatus_F_contig13065:1569..1680Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 1570..1680 -
1622927811.2076907-CDS-E-fasciculatus_F_contig13065:2977..30791622927811.2076907-CDS-E-fasciculatus_F_contig13065:2977..3079Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 2978..3079 -
1695995704.6299512-CDS-E-fasciculatus_F_contig13065:2977..30791695995704.6299512-CDS-E-fasciculatus_F_contig13065:2977..3079Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 2978..3079 -
1622927811.2221642-CDS-E-fasciculatus_F_contig13065:3644..37581622927811.2221642-CDS-E-fasciculatus_F_contig13065:3644..3758Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 3645..3758 -
1695995704.6392124-CDS-E-fasciculatus_F_contig13065:3644..37581695995704.6392124-CDS-E-fasciculatus_F_contig13065:3644..3758Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13065 3645..3758 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13065.2322.1

>prot_E-fasciculatus_F_contig13065.2322.1 ID=prot_E-fasciculatus_F_contig13065.2322.1|Name=mRNA_E-fasciculatus_F_contig13065.2322.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=178bp
FECFSQHPETGGVGIEVNYEDSIKVFTPEQIIACMLTKLIAIAKAANNGI
DVADSVMAIPGWYTDAMRNAMMNACSIGGVNCLRLIHEHTATALAYGIYK
SAKGEFSEKEPQFVLFLDVGHSSFSASVVTFVQGSLTVKSAAFDSKLGGR
DMDWAIAQHAADEFKSKTGKVRKEENN*
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mRNA from alignment at E-fasciculatus_F_contig13065:49..3758-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13065.2322.1 ID=mRNA_E-fasciculatus_F_contig13065.2322.1|Name=mRNA_E-fasciculatus_F_contig13065.2322.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3710bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13065:49..3758- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTGAATGTTTCAGCCAGCACCCGGAAACCGGGGGCGTGGGCATCGAGGT
TAACTACGAAGACTCGATCAAGGTCTTCACGCCAGAGCAGATCATCGCGT
GCATGCTCACAAAGGTGCGGCTTCCTGCTGGTCTTTCCTAGGCGGTTCCC
TTGGTCTCGCTTTGTGCGGTCTTGTGTTGTCGTGGGTGCTTGCTCTTGCG
CTGCTGCGGTGTTGAGGGAATTGTCTCGGCGTGCGGCTTGCCTGGGCGTG
GTCGGGCGTGCGTGCCGACGGTGGGGTGCTATTTCCGTCCTTGCTGTCTC
TCTGTCGCTCTGTCTCTGTCTCTGTGTGTCGCTCTCTCTCTCTTTCTCTC
TATGTGTGTCCATTTGTATTTCTCTCTCTTGCCGTCTCTTTTCTCTCTCT
GTCGCTCTCTGTCCTCTCCCTCTCTTTCTGTCTGCTTTTCTCTCCGTTTC
TGTCTCTCGCCCTCCGTCTTTCTCTCGCTGTTTCTTCCACACACACACGA
TTCTTCAGAACATGTAGACGCCTAGCTTTTTTTTTGCGTCGCTTAATGTT
GGCCCGATACTAACTACGTGAGACACGTTTCAATGTTTGAATTTACGCCT
ATACGCGCCTTGTCGACATCCATCGTTGCTTTACCACTTTTTGCATTGGG
CTGGTTGCATGCGTTTTTTTGTGCACCAGTTGATCGCGATCGCGAAGGCG
GCTAACAACGGCATCGACGTGGCGGACTCTGTGATGGCTATTCCCGGCTG
GTATACGGATGCCATGAGGAACGCAATGATGGTGAGCGTTAAGTTTTTTC
TTTTTCTTGATTCTTGTTTGACACAACGAATCCTTCTCTATCCACAGAAA
ATAGTCTGAGACAGATAAAGCAACGGATTCATTTGTTTTTGTCTGTGTTT
TGTCGGGATTTATCAGCACGAGGAACGCGGCGGGTGTGATGTGAGTGTTG
TTTCGGTTCAAGGGAGACGGTAATTATTTTCGTGGTGTTTTTGGTTTGAG
TTTTTTTTTCAACGTAAGGAACGCCGCAGTTTCATGTTGTTTGGTTGGTA
TTATTCTCAGCAAGAGGAACACCGTAGGTGCTCTGGTTGTTGATGTTGTT
TTCAGCGTGAGGAACACCGCAATTACTCATGTGTTTTGATTGAGAATCTG
CTTAGCACGAAGAACGCCATACATGCTCTGGTTGAGAATTATTTTTTGAA
GTCAGATGATGAAACTGGAGGCAAGCCAGGCAGGGAGCAAAGGCGGGACC
AATAGGACCAATGGCTCCGTGTGTTAGTGTATGCTTTACTCCCTGTGTCA
CCCCGACTGATACTTCAAATACGTACCGTCAGACCGGCTTTTGAGGGTGA
TGGAAACACAGGCAGTGCATTAGATGAGCAACACATGTTCTTGTGAGGAA
CGGAGATGGAAGAAGATAGAATCGTTCCCGGCGCTGTCACGCAATAAAGA
GAGGTAACATTCGAGAGACAACCACCCAGATGCGCCGTCTCACTCTTGTA
TTGCCAACCTCGTTTCCACGGGAAAACAGAGAAACGAGAGTGCTCTGTTG
AGACACCACCCGCCTGCCCTGCAAGATATTTTCGCGCAGTCGTTCTCCAA
CAACCCGATCGTGAATGGCTATGGAAAACGAGTGTCGCTCGTCGTACAGC
AGTGCACGAGATGAACCGACACTCCTTTTTTCCCTTCCCTATCCACGAGG
AGTGGCGACACCGAGAACCCTCGTGGAAAGTGATGCCGCTGCTACTGTTT
GATCCCATATGCATACAATCTGGAGAAGAACCGACGTTAAGATATGATAC
TCATGTGCGACTGCCGGTGTATCCTTTTCCTTGTACAAGTGTCGGTGGTG
GGCACGAAGATAACATGTACGGTTATTATTTTTGCCGTTGCAGAGCATTT
TTTTTTTCGTCCCATTGCTGGCGTACTGACAACGATCCCTCTTTTTTTCT
TTTTTTGATGGCGTTCGGTGGTCAGGATGCCTCCTTCCGCATCCCCTGTC
TCTGTGGGTCGATCTTGACGCCCGTGTCTTCTCACCTGTAATCTCCCTTT
CTATTTGTTGCTGGAATGATGTGTGCAGAACGCGTGTTCGATTGGAGGCG
TGAACTGCCTCCGTCTCATCCACGAGCACACCGCCACGGCGCTCGCGTAC
GGCATCTACAAGTCGGCCAAGGGGGAATTCTCCGAGAAGGTGATTAAAAC
CCTTAACTCTAGCCTACCGTAGCTGACACAAGATATCACACCCGCTGAAG
CTGTTTTCAAAGCTCGATTTCTCCACAGCAACAAGAGTGGCAGCACCGAA
AACTGCGGCGTTGAAGCCGTCTCGTGGAGAGATAGCTTTCCGACAAACGT
ATCGTTTTATTTATTCATCCTCTTCGTCGTGGAGTAATCTAATCCAGCTT
TGAAGATCGATCCAGGGGGTGTGGTATCTTGTGTCACTCTAGCCAACCCT
ACCCCTGACCCCAAGCCCAAGTCGTACATCGTAGGCCATGTTACTTTCCG
ATGTGCAGCCGGTCTCCTTGATTATTTTAGTTTTATGTCAGCAACTGGCT
TTCCATCTGTCGCCTGATGTTGAGAGTCGACACCTGAGGGAGTCAGAGAC
AGCTGCTGCGCGCTACTACTGTAAGGTACTTCGACCGGTCATAAACCGTC
GGCAACGTTAACGTTGACACGTGTCCTATTCGCTGCTTGCCCTTCCTTGT
CTCGCGCGCTGCTGCCTCATGTGTCGCCAAAAAACCCCTTATTTGCGGAG
TTCACTTTCTTATTTTTTTCTCCTGTACTTTTTGTTTCATCGGCTGCGTC
ATGTGTGGTCAACATCTATTTACCGAATGTCTCTTCGTTTTATTTGTTTT
TTTTGCTACACGCCCGTACAGGAGCCTCAGTTTGTACTGTTTTTGGACGT
CGGGCACTCTAGCTTCAGCGCCTCGGTTGTGACCTTTGTTCAGGTGAGTC
GAGCCATCGATCGTTGTAACAACGGCCGTGCCAGCGGTTGTTATCGACAA
GGAAATGTTGTTTGGCCTGGTTGTGGTTGTTGTTGTTGTTGTTGTTGATA
CTTGTCGTCGATGCTGTTGGTGTTTTTTAGTCGTTGTTGTGCTGTTGCTG
ATGGATGCTTAAAATGTTGCTGTTGTTCTTTTGTTGTAGCTTTGTTGCTG
TTGTTGCTGTTGTTGCTACAGCAGTGGTGCCCCCCCGCCCCCTGTAGGTG
CCCCATCGGGACAGTTGTGAGTGTGAGAGCAGCTCTTGACCGACTGCAAG
ACGATAGAGCCCTCTCCGTGTGCCTCTTGGTTCTATCGCATCTACAGCGT
ATCATCCACATATCCTCTCTCCACTGACAGCAAGACAAGAGTGCCCTCTC
CATGTGCCTCTTCCTTCTATCGCAGACAGCAAGCGTATCATCCACATATC
CTCTCTCCACTGACAGCAAGACAAGAGTGATCTCTCCATGTTTCTCTTCC
TTCTATCGCATGCATACAACAACCGCATCCTGCGCCACAACAACATGCGA
AAGGGTCCGCTAAAGACAACCGAGACTGAAGACGTGGCTTCAGCCTAAAT
GTCGTTTTGCTTGTCTCACCTGCAGGGCTCGTTGACGGTGAAGAGCGCGG
CGTTCGACAGCAAGCTGGGAGGGCGGGACATGGACTGGGCCATCGCACAG
CACGCAGCCGACGAGTTCAAGTCCAAGACCGGGAAAGTGAGAAAAGAAGA
AAATAACTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13065:49..3758-

>mRNA_E-fasciculatus_F_contig13065.2322.1 ID=mRNA_E-fasciculatus_F_contig13065.2322.1|Name=mRNA_E-fasciculatus_F_contig13065.2322.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1068bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13065:49..3758- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTGAATGTTTCAGCCAGCACCCGGAAACCGGGGGCGTGGGCATCGAGGT
TAACTACGAAGACTCGATCAAGGTCTTCACGCCAGAGCAGATCATCGCGT
GCATGCTCACAAAGTTTGAATGTTTCAGCCAGCACCCGGAAACCGGGGGC
GTGGGCATCGAGGTTAACTACGAAGACTCGATCAAGGTCTTCACGCCAGA
GCAGATCATCGCGTGCATGCTCACAAAGTTGATCGCGATCGCGAAGGCGG
CTAACAACGGCATCGACGTGGCGGACTCTGTGATGGCTATTCCCGGCTGG
TATACGGATGCCATGAGGAACGCAATGATGTTGATCGCGATCGCGAAGGC
GGCTAACAACGGCATCGACGTGGCGGACTCTGTGATGGCTATTCCCGGCT
GGTATACGGATGCCATGAGGAACGCAATGATGAACGCGTGTTCGATTGGA
GGCGTGAACTGCCTCCGTCTCATCCACGAGCACACCGCCACGGCGCTCGC
GTACGGCATCTACAAGTCGGCCAAGGGGGAATTCTCCGAGAAGAACGCGT
GTTCGATTGGAGGCGTGAACTGCCTCCGTCTCATCCACGAGCACACCGCC
ACGGCGCTCGCGTACGGCATCTACAAGTCGGCCAAGGGGGAATTCTCCGA
GAAGGAGCCTCAGTTTGTACTGTTTTTGGACGTCGGGCACTCTAGCTTCA
GCGCCTCGGTTGTGACCTTTGTTCAGGAGCCTCAGTTTGTACTGTTTTTG
GACGTCGGGCACTCTAGCTTCAGCGCCTCGGTTGTGACCTTTGTTCAGGG
CTCGTTGACGGTGAAGAGCGCGGCGTTCGACAGCAAGCTGGGAGGGCGGG
ACATGGACTGGGCCATCGCACAGCACGCAGCCGACGAGTTCAAGTCCAAG
ACCGGGAAAGTGAGAAAAGAAGAAAATAACTGAGGCTCGTTGACGGTGAA
GAGCGCGGCGTTCGACAGCAAGCTGGGAGGGCGGGACATGGACTGGGCCA
TCGCACAGCACGCAGCCGACGAGTTCAAGTCCAAGACCGGGAAAGTGAGA
AAAGAAGAAAATAACTGA
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