mRNA_E-fasciculatus_F_contig12971.2252.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE) HSP 1 Score: 249 bits (635), Expect = 4.580e-75 Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 1
Query: 1 LDRIAADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
L R ADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ
Sbjct: 358 LPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 482
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI) HSP 1 Score: 249 bits (635), Expect = 3.700e-74 Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 1
Query: 1 LDRIAADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
L R ADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ
Sbjct: 468 LPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 592
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: A0A7S2SV11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV11_9STRA) HSP 1 Score: 186 bits (472), Expect = 5.030e-55 Identity = 91/125 (72.80%), Postives = 103/125 (82.40%), Query Frame = 1
Query: 1 LDRIAADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
L + ADDVV SVL+LF ++E DGAWHGGCLALAELARRGLLLP RLP A P+V +A+ YDVRRG+ VGAHVRDAACYVCWAFARAYSP V+ PH+ LC+ ML ALFDRE+N RRAAAAA Q
Sbjct: 9 LPKEFADDVVASVLELFSDSEGDGAWHGGCLALAELARRGLLLPFRLPEAVPVVAKAIQYDVRRGSNSVGAHVRDAACYVCWAFARAYSPAVMRPHVDKLCEGMLLAALFDREINCRRAAAAAFQ 133
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA) HSP 1 Score: 191 bits (484), Expect = 8.290e-54 Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 16 ADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
AD+VV SVLDLF +AE DG WHGGCLALAELARRGLLLP+RLP A P+V RA+AYDVRRG GVGAHVRDAACYVCWAFARAYSP L PH+ LC +ML TALFDRE+NVRRAAAAA Q
Sbjct: 437 ADEVVGSVLDLFSDAESDGGWHGGCLALAELARRGLLLPQRLPVAVPVVIRAMAYDVRRGTTGVGAHVRDAACYVCWAFARAYSPAALRPHMQELCRAMLCTALFDREINVRRAAAAAFQ 556
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: UPI0018D85098 (tubulin-specific chaperone D-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D85098) HSP 1 Score: 170 bits (430), Expect = 1.540e-46 Identity = 84/125 (67.20%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 1 LDRIAADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
L R AD VV SVL+LF EWDGAWHGGCLALAEL RRGLLLPERLP P+V +ALAYD ++G+ VGAHVRDAACYVCWAFARAY P + PH+ L +++ T +FDREVN RRAA+AA Q
Sbjct: 399 LPRELADQVVESVLELFNLREWDGAWHGGCLALAELGRRGLLLPERLPVVVPVVLKALAYDEKKGSCSVGAHVRDAACYVCWAFARAYDPEDISPHVNKLASALVITTVFDREVNCRRAASAAFQ 523
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: A0A4D9D438_9STRA (TFCD_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D438_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.130e-46 Identity = 86/120 (71.67%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 16 ADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
AD+VV SVL F E+ D AWHGGCLALAELARRG LLPERL A P+V RAL YDVRRG VGAHVRDAACYVCWAFARAYSP+ + P++ L ML TALFDRE+N RRAAAAA Q
Sbjct: 452 ADEVVASVLSSFTESAPDSAWHGGCLALAELARRGSLLPERLGLAVPVVTRALRYDVRRGQASVGAHVRDAACYVCWAFARAYSPQAMRPYVQRLATGMLLTALFDREINCRRAAAAAFQ 571
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: A0A7S1CFH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFH1_9STRA) HSP 1 Score: 169 bits (427), Expect = 3.230e-46 Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1
Query: 1 LDRIAADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
L R A DVV +VL L + E DGAWHGGCLALAELARRGLLLP LP A P+V +ALAYDVRRGA VG HVRDAACYVCWAFARAYSP V+ P++ L +M++ A+FDREVN RRAA+AA Q
Sbjct: 56 LPRDFAGDVVGAVLQLLCDEEGDGAWHGGCLALAELARRGLLLPSLLPEAVPVVVKALAYDVRRGAHSVGTHVRDAACYVCWAFARAYSPSVMRPYVRDLALAMMTVAVFDREVNCRRAASAAFQ 180
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: A0A2R5GKZ4_9STRA (Tubulin-specific chaperone D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKZ4_9STRA) HSP 1 Score: 168 bits (426), Expect = 5.400e-46 Identity = 84/120 (70.00%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 16 ADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
ADDVV VL+LF +E D AWHGGCLALAELARRGLLLP+RL P V +AL YDVRRG VGA+VRDAACYVCWAFARAY P V+ PH+ LC M+ TA+FDREVN RRAA+AA Q
Sbjct: 443 ADDVVAFVLELFDASEGDAAWHGGCLALAELARRGLLLPKRLGAVVPFVVQALIYDVRRGHNSVGANVRDAACYVCWAFARAYEPAVMAPHVSELCPQMMVTAVFDREVNCRRAASAAFQ 562
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: A0A6P8HPE4_ACTTE (tubulin-specific chaperone D-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HPE4_ACTTE) HSP 1 Score: 166 bits (419), Expect = 1.360e-45 Identity = 82/125 (65.60%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 1 LDRIAADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
L + ADDVV SVL+LF E DGAWHGGCLALAEL RRGLLLP+RLP P+V +ALAYD RRG+ VG+HVRD ACYVCW+FARAY PR + H+ L +++ ALFDREVN RRAA+AA Q
Sbjct: 454 LPKDLADDVVGSVLELFTPNETDGAWHGGCLALAELGRRGLLLPQRLPEVVPVVLKALAYDERRGSYSVGSHVRDGACYVCWSFARAYDPREMTTHVNQLASALVVAALFDREVNCRRAASAAFQ 578
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Match: A0A7S4B1S4_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B1S4_CHRCT) HSP 1 Score: 157 bits (398), Expect = 3.010e-45 Identity = 79/119 (66.39%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 19 DDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQ 375
DDVV SVLDL E AWHGGCLALAELARRGLLLP RLP P + RAL YDV RG VG HVRDAACYVCWAFARA+ P ++ PH+ L S+L +FDREVN RRAA+AA Q
Sbjct: 118 DDVVGSVLDLLTPEEPASAWHGGCLALAELARRGLLLPPRLPEVLPRLLRALHYDVPRGTSSVGTHVRDAACYVCWAFARAFEPELMAPHVEKLAQSLLIQVVFDREVNCRRAASAAFQ 236 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12971.2252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12971.2252.1 >prot_E-fasciculatus_F_contig12971.2252.1 ID=prot_E-fasciculatus_F_contig12971.2252.1|Name=mRNA_E-fasciculatus_F_contig12971.2252.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=125bp LDRIAADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRAback to top mRNA from alignment at E-fasciculatus_F_contig12971:1538..2713- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12971.2252.1 ID=mRNA_E-fasciculatus_F_contig12971.2252.1|Name=mRNA_E-fasciculatus_F_contig12971.2252.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1176bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12971:1538..2713- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12971:1538..2713- >mRNA_E-fasciculatus_F_contig12971.2252.1 ID=mRNA_E-fasciculatus_F_contig12971.2252.1|Name=mRNA_E-fasciculatus_F_contig12971.2252.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=750bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12971:1538..2713- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |