mRNA_E-fasciculatus_F_contig12963.2245.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: A0A672KEG3_SINGR (Uncharacterized protein n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672KEG3_SINGR) HSP 1 Score: 48.5 bits (114), Expect = 5.270e-6 Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 4 QMLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNAQG 153
Q+LL++GA +A G T L LACE GHLD++KL++ AD E ++ G
Sbjct: 17 QLLLEKGADVNARDDHGRTALSLACEHGHLDSVKLLVQFSADPELTDTWG 66
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: A0A3R7B1P6_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B1P6_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 6.180e-6 Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 34 HASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASN 144
H+ TTG+TPL+ AC RGH+D K+++A GAD++A N
Sbjct: 108 HSDRTTGNTPLMAACARGHVDCAKILVAVGADVDARN 144
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: A0A1V5K6N6_9BACT (Phosphocholine transferase AnkX n=1 Tax=Candidatus Aerophobetes bacterium ADurb.Bin490 TaxID=1852830 RepID=A0A1V5K6N6_9BACT) HSP 1 Score: 49.7 bits (117), Expect = 1.290e-5 Identity = 22/51 (43.14%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 7 MLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGG--ADLEASNAQG 153
MLL +GA+P +GSTPL+ ACE+G ++T+K+++ AD+ AS+ G
Sbjct: 1 MLLKKGANPDVKNRSGSTPLMAACEKGSIETVKMLLMNNPKADINASDKNG 51
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: UPI0020190763 (ankyrin repeat and SOCS box protein 3 isoform X1 n=3 Tax=Heteromyidae TaxID=10015 RepID=UPI0020190763) HSP 1 Score: 49.7 bits (117), Expect = 1.530e-5 Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 VQMLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNA 147
VQ+LL+ GA P+A+T +TPL LA E G +D +KL++ GA++ S++
Sbjct: 95 VQILLEAGADPNATTLEETTPLFLAVENGQIDALKLLLRHGANVNGSHS 143
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: A0A1S3AM56_ERIEU (ankyrin repeat domain-containing protein 63 n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A1S3AM56_ERIEU) HSP 1 Score: 49.3 bits (116), Expect = 2.030e-5 Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 VQMLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNAQG 153
V++LL++GA+ + G T L LACERGHLD ++L++ D EA++A G
Sbjct: 67 VRLLLEQGAAVNLRDERGRTALSLACERGHLDAVQLLVQFSGDPEAADAAG 117
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: UPI0010A94B54 (LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 63 n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=UPI0010A94B54) HSP 1 Score: 49.3 bits (116), Expect = 2.070e-5 Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 VQMLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNAQG 153
V++LL++GA+ + G T L LACERGHLD ++L++ D EA++A G
Sbjct: 67 VRLLLEQGAAVNLRDERGRTALSLACERGHLDAVQLLVQFSGDPEAADAAG 117
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: UPI0018F6DAD3 (LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 63 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F6DAD3) HSP 1 Score: 49.3 bits (116), Expect = 2.070e-5 Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 VQMLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNAQG 153
V++LL++GA+ + G T L LACERGHLD ++L++ D EA++A G
Sbjct: 67 VRLLLEQGAAVNLRDERGRTALSLACERGHLDAVQLLVQFSGDPEAADAAG 117
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: UPI001C54BAFE (ankyrin repeat domain-containing protein 63 n=2 Tax=Heteromyidae TaxID=10015 RepID=UPI001C54BAFE) HSP 1 Score: 49.3 bits (116), Expect = 2.070e-5 Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 VQMLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNAQG 153
V++LL++GA+ + G T L LACERGHLD ++L++ D EA++A G
Sbjct: 67 VRLLLEQGAAVNLRDERGRTALSLACERGHLDAVQLLVQFSGDPEAADAAG 117
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: A0A645HLJ3_9ZZZZ (Uncharacterized protein n=1 Tax=bioreactor metagenome TaxID=1076179 RepID=A0A645HLJ3_9ZZZZ) HSP 1 Score: 46.6 bits (109), Expect = 2.080e-5 Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 VQMLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNAQG 153
V L+ +GA P+ TG TPL A G+LDT+K++IAGGA +N+ G
Sbjct: 2 VTFLIAQGADPNLQEQTGLTPLHWAASHGNLDTVKVLIAGGAAHNVANSFG 52
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Match: A0A6P8RTK3_GEOSA (ankyrin repeat domain-containing protein 63 n=1 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8RTK3_GEOSA) HSP 1 Score: 48.9 bits (115), Expect = 2.720e-5 Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 VQMLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNAQG 153
V++LLD+GA + G T L LACE GHLDT+KL++ AD E + G
Sbjct: 67 VRLLLDKGAHVNEEDERGRTALSLACELGHLDTVKLLVQFNADPEIPDRDG 117 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12963.2245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12963.2245.1 >prot_E-fasciculatus_F_contig12963.2245.1 ID=prot_E-fasciculatus_F_contig12963.2245.1|Name=mRNA_E-fasciculatus_F_contig12963.2245.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=50bp MLLDRGASPHASTTTGSTPLLLACERGHLDTMKLIIAGGADLEASNAQGFback to top mRNA from alignment at E-fasciculatus_F_contig12963:21..176- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12963.2245.1 ID=mRNA_E-fasciculatus_F_contig12963.2245.1|Name=mRNA_E-fasciculatus_F_contig12963.2245.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=156bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12963:21..176- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12963:21..176- >mRNA_E-fasciculatus_F_contig12963.2245.1 ID=mRNA_E-fasciculatus_F_contig12963.2245.1|Name=mRNA_E-fasciculatus_F_contig12963.2245.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=300bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12963:21..176- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |