mRNA_E-fasciculatus_F_contig12960.2242.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A6H5KI57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI57_9PHAE) HSP 1 Score: 389 bits (999), Expect = 1.700e-130 Identity = 197/212 (92.92%), Postives = 202/212 (95.28%), Query Frame = 1
Query: 1 LADASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLEDTMPEVTMRESLMTAAFKGQPLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGSESGDGVDAAGPAESSYVGGESRNIVGTDK 636
+ +A SRLETDLN GTCHLLELMAFKST TRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTL+NPRVTPEEVEEQKAVIGFQLEDTMPEVTMRESLMTAAFKGQPLGRPYWCPKSALPKLEA+MVR FRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEG SGDGVDAAGPAESSYVGGESRN+V K
Sbjct: 161 VVNAGSRLETDLNTGTCHLLELMAFKSTATRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLINPRVTPEEVEEQKAVIGFQLEDTMPEVTMRESLMTAAFKGQPLGRPYWCPKSALPKLEANMVRSFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGG-SGDGVDAAGPAESSYVGGESRNVVAKHK 371
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A835Z8C4_9STRA (Mitochondrial processing peptidase alpha subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8C4_9STRA) HSP 1 Score: 206 bits (524), Expect = 3.040e-60 Identity = 112/218 (51.38%), Postives = 143/218 (65.60%), Query Frame = 1
Query: 1 LADASSRLETDLNAGTCHLLELMAFKSTVTRSHQQV----VSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLEDTMPEVTMRESLMTAAFKGQPLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGSESGDGVDAAGPAESSYVGGESR--NIVGTDK 636
L +A SR ET+ N G HLLELMAFKST R+ QQ + E E MG T + H SR+QML+CVDVLRD LE A++LL+D +L P +T EEV++QK V+ +Q+ED +P+ M+E+L AA+ GQ LGRP+WCP ++ L A M R FR H+T NMVL GAGV HDEL+RLG+KYF L + G+ PA S Y GGE R +VG K
Sbjct: 121 LVNAGSRHETEANQGVSHLLELMAFKSTPRRAQQQASTNNIIELEAMGATVTAHSSREQMLFCVDVLRDYLEPAMDLLSDVVLTPEMTEEEVDDQKVVMQYQMEDMLPDTVMKEALQGAAYPGQALGRPHWCPPESMDALSADMARQFRTEHYTAPNMVLVGAGVQHDELMRLGDKYFAPLASTAGASI-----ITSPA-SQYGGGEVRVEGVVGAQK 332
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A7S3PID5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PID5_9STRA) HSP 1 Score: 159 bits (403), Expect = 9.110e-45 Identity = 90/208 (43.27%), Postives = 129/208 (62.02%), Query Frame = 1
Query: 7 DASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLE--DTMPEVTMRESLMTAAF-KGQPLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGSESGDGVDAAGPAESSYVGGESRNI 621
DA SR E D N+G HLLE MAFKST RSH ++V + E++GGT SR+ ++Y + LRDN+E V+++AD++L P + P ++E+Q+ VIG++L+ + + + E L +AA+ + PLG+P WCP+ L KL A +R F + F MVL+GAGVDHDELV L KYF L +G+ A P S Y GG+ R +
Sbjct: 84 DAGSRYENDSNSGVSHLLEHMAFKSTENRSHLRLVRDIEDVGGTVGAASSRECIMYTGECLRDNVETIVDVMADSILRPALKPWDIEDQREVIGYELQAMEQNAQALLTELLHSAAYGESTPLGQPLWCPERNLGKLNADTIRSFMSKTFLAKRMVLSGAGVDHDELVSLAEKYFADLATAP--PAGETEPAMLP--SPYKGGDRRYV 287
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A7S3XM65_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM65_HETAK) HSP 1 Score: 159 bits (403), Expect = 1.380e-44 Identity = 78/183 (42.62%), Postives = 116/183 (63.39%), Query Frame = 1
Query: 1 LADASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLEDTMPEVTMRESLMTAAFKGQPLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGS 549
+ DA S+ + G HL+ELMAFKST R+H+QV+ E E +GG + + +R+Q+LYCVD LRD L RA+++LAD +L PRV P+E+E+ + ++ + ++ ++E+L AA+KG PLGRP++CP P L A +V +R + T V+AGAGVDH E V + + F L A S
Sbjct: 116 IIDAGSKYDEPAEMGATHLMELMAFKSTYKRTHEQVLGEIEGLGGMATANANREQLLYCVDCLRDALPRALDVLADGVLRPRVAPDEIEDARTLMALHADAIPADLALKEALQGAAYKGTPLGRPHFCPPERAPALGAELVHAYRAKFLTAPRAVVAGAGVDHAEFVAMVAEAFRSLPAAGSS 298
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A7S3UY37_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UY37_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.200e-42 Identity = 90/206 (43.69%), Postives = 128/206 (62.14%), Query Frame = 1
Query: 7 DASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLE--DTMPEVTMRESLMTAAF-KGQPLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGSESGDGVDAAGPAESSYVGGESR 615
DA SR E D N+G HLLE MAFKST RSH ++V + E++GGT SR+ ++Y + LRDN+E V+++AD++L P + P ++E+Q+ VIG++L+ + + + E L +AA+ + PLG+P WCP+ L KL A +R F + F MVL+GAGVDHDELV L KYF L +G+ A P S Y GG+ R
Sbjct: 84 DAGSRYENDSNSGVSHLLEHMAFKSTENRSHLRLVRDIEDVGGTVGAASSRECIMYTGECLRDNVETIVDVMADSILRPALKPWDIEDQREVIGYELQAMEQNAQALLTELLHSAAYGESTPLGQPLWCPERNLGKLNADTIRSFMSKTFLAKRMVLSGAGVDHDELVSLAEKYFADLATAP--PAGETEPAMLP--SPYKGGDRR 285
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: K3WAT5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT5_GLOUD) HSP 1 Score: 157 bits (397), Expect = 8.900e-42 Identity = 86/186 (46.24%), Postives = 118/186 (63.44%), Query Frame = 1
Query: 7 DASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLEDTM--PEVTMRESLMTAAF-KGQPLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGSES 555
DA SRLE D N G HLLE + FKST TRSH ++V E E +G T++ R+Q++Y +D+LRDN+ + VELLAD++LN VTP+E+E KA++ FQ ED + P+ ++E + AA+ LGRP CP + L V+ FR +HF MVLAG+GVDH LV L K+F + EG E+
Sbjct: 123 DAGSRLEDDSNVGVTHLLEHLGFKSTKTRSHAELVREIETIGALTTSSCGREQIIYTIDLLRDNVVKGVELLADSVLNVDVTPDEIEGIKAIMRFQTEDLLENPQALLQEYVHAAAYGPNASLGRPLQCPLDKIDSLTLEKVQAFRNKHFVAEKMVLAGSGVDHQSLVLLAEKFFS--QIPEGGEA 306
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A6U3Q142_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q142_9STRA) HSP 1 Score: 155 bits (393), Expect = 5.740e-41 Identity = 88/216 (40.74%), Postives = 126/216 (58.33%), Query Frame = 1
Query: 1 LADASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTP---EEVEEQKAVIGFQLEDTMPEVTMRESLMTAAF-------KGQPLGRPYWCPKSALPKLEASMVRGFRKRHF-TPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGSESGDGVDAAGPAESSYVGGESR 615
L D SR ET G HLLEL+AF+ST +S ++ S +E+GG T SR+QM+YC+D+LR N+ A++LL DT++ P++ EVEE K ++ +Q D +PE+ + E L A + + Q LG+P++CP ALP L A + FR H P MV+AGAG+ HDELV L N++F + S G+ +A S+Y GGE R
Sbjct: 157 LVDVGSRHETKNEVGCNHLLELLAFRSTKFQSSVEITSRMDELGGVTFAASSREQMMYCIDILRPNVREAMKLLRDTVMYPKLEDGLYSEVEEVKRIVEYQTMDMLPEIALAEGLQIAGYGVIGNGGEVQQLGKPHFCPLEALPNLNAQTINDFRNEHLLNPSGMVIAGAGIGHDELVLLSNEFFSEI-----SGGGNPNEANRTVPSTYTGGEFR 367
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A485LBQ0_9STRA (Aste57867_18949 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBQ0_9STRA) HSP 1 Score: 150 bits (379), Expect = 3.360e-39 Identity = 78/181 (43.09%), Postives = 112/181 (61.88%), Query Frame = 1
Query: 7 DASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLEDTM--PEVTMRESLMTAAFK-GQPLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAV 540
DA SR E D N G H++E + FKS+VTR H ++V EFE++G T+ R+Q++Y VDVLRDN++RA+ELLAD +L P +T +EVE K ++ Q ED P++ ++E + TAA+ LGRP CP + L V + K+ F MVLAG+G++H LV + YFG + V
Sbjct: 122 DAGSRFEDDSNTGITHMMEHLGFKSSVTRPHAELVREFEDIGAQTTASSGREQLIYTVDVLRDNVDRALELLADAILRPAITDDEVEMTKTIMEIQSEDLKENPQMFLQERIHTAAYGIDHTLGRPLQCPLDKVDNLSRETVAAYMKKFFVAPRMVLAGSGIEHAALVEKAHAYFGDINPV 302
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A2R5GCH9_9STRA (Mitochondrial-processing peptidase subunit alpha n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCH9_9STRA) HSP 1 Score: 149 bits (375), Expect = 6.340e-39 Identity = 86/206 (41.75%), Postives = 127/206 (61.65%), Query Frame = 1
Query: 7 DASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLE--DTMPEVTMRESLMTAAFKGQ-PLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYFGGLEAVEGSESGDGVDAAGPAESSYVGGESR 615
DA SR ETD N G HL+E MAFKST RSH ++V + E++GG + +R+ M++ + LRD +E AV++L+DT++ P++ P +++EQ+ VIG+ LE + + + E L AA+ + PLGR WCP+ L KL +R + + HFT MVL+ AGV+HD LV L +KYF L ++ +GVD + Y GGE R
Sbjct: 77 DAGSRYETDANNGVSHLMEHMAFKSTENRSHLRLVRDIEDIGGQMAAASAREFMIFQGECLRDYVENAVDILSDTIVRPKLAPWDIDEQRKVIGYDLENMEANAQSVLTELLHEAAYGSETPLGRSLWCPERNLSKLGEDDLRAYLQTHFTAPRMVLSAAGVEHDRLVDLASKYFEDLP----TKPANGVDPITET-AKYRGGERR 277
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Match: A0A2D4BTL4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTL4_PYTIN) HSP 1 Score: 149 bits (375), Expect = 1.270e-38 Identity = 77/175 (44.00%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 7 DASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLADTLLNPRVTPEEVEEQKAVIGFQLEDTM--PEVTMRESLMTAAF-KGQPLGRPYWCPKSALPKLEASMVRGFRKRHFTPGNMVLAGAGVDHDELVRLGNKYF 522
+A SR E G HLLE + FKST TRSH ++V E E++G T+ R+Q++Y +DVLRDN ERA+ELLAD++L+ PEE++ K ++ +Q ED + P+ ++E + AA+ + Q LGRP CP + ++ V+ FR++HF MVLAG+G+DH LVRL K F
Sbjct: 115 NAGSRYEDASEVGVTHLLEHLGFKSTTTRSHAELVREIEDIGALTTASCGREQIIYTIDVLRDNAERALELLADSVLHADFVPEEIDAIKTIMMYQTEDLLENPQALLQEYIHLAAYGQEQALGRPLQCPVDQIERITIDTVKQFRRKHFVADKMVLAGSGIDHQTLVRLAEKLF 289 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12960.2242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12960.2242.1 >prot_E-fasciculatus_F_contig12960.2242.1 ID=prot_E-fasciculatus_F_contig12960.2242.1|Name=mRNA_E-fasciculatus_F_contig12960.2242.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=212bp LADASSRLETDLNAGTCHLLELMAFKSTVTRSHQQVVSEFEEMGGTTSTHback to top mRNA from alignment at E-fasciculatus_F_contig12960:25..3205+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12960.2242.1 ID=mRNA_E-fasciculatus_F_contig12960.2242.1|Name=mRNA_E-fasciculatus_F_contig12960.2242.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3181bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12960:25..3205+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12960:25..3205+ >mRNA_E-fasciculatus_F_contig12960.2242.1 ID=mRNA_E-fasciculatus_F_contig12960.2242.1|Name=mRNA_E-fasciculatus_F_contig12960.2242.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1272bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12960:25..3205+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |