mRNA_E-fasciculatus_F_contig12951.2237.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: D7FQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH8_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.090e-39 Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
RC +CMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM
Sbjct: 849 RCPLCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 919
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: A0A6H5L7J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J6_9PHAE) HSP 1 Score: 145 bits (365), Expect = 8.100e-39 Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
RC +CMDSSSFKKRLVLSLGEHTYLYLATGTHRLS GHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM
Sbjct: 457 RCPLCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSGGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 527
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: A0A7S3Y866_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y866_HETAK) HSP 1 Score: 89.7 bits (221), Expect = 1.040e-21 Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLAT-GTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
RC +CMD+ +F + +L+LGEH L+LA G L++GHCY+ P+RH ASTACDEEV RE+E FK +LRKM
Sbjct: 34 RCPLCMDAPAFARHRLLALGEHAALHLAPLGPRSLADGHCYLAPLRHVEASTACDEEVLRELEKFKVALRKM 105
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: UPI0014259686 (CWF19-like protein 2 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259686) HSP 1 Score: 76.3 bits (186), Expect = 1.480e-14 Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
+C C+DSS KK L++SLG YL + T L++GHC ++P++HT A TA DE+VW E++ FK +L KM
Sbjct: 682 KCPFCIDSSEMKKHLIISLGTKVYLSVPA-TQSLTDGHCLLIPMQHTTAVTALDEDVWYEMQTFKRALVKM 751
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: A0A7S0CHB4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHB4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.190e-14 Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
RC ++SS FK+ ++LSLG L LA L++GHCYIVPI+HT + +C+EEV+ E+ F+SSLR M
Sbjct: 7 RCWWWIESSMFKRHMLLSLGNQASLVLAPENVSLAKGHCYIVPIKHTESIVSCEEEVFSEVLRFQSSLRAM 77
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: UPI00052055B6 (CWF19-like protein 2 n=1 Tax=Cariama cristata TaxID=54380 RepID=UPI00052055B6) HSP 1 Score: 74.7 bits (182), Expect = 2.520e-14 Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
+C C DSS K L++++G YL L + T L+EGHC I P++H A+T DE++W EI++F+S+L KM
Sbjct: 159 KCPYCFDSSELSKHLIIAIGTKVYLSLPS-TQSLTEGHCLIAPLQHHTAATLLDEDIWEEIQMFRSALVKM 228
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: UPI001BB2C2A2 (CWF19-like protein 2 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2C2A2) HSP 1 Score: 75.5 bits (184), Expect = 2.760e-14 Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
+C C++S KK L+++LG YL + T +SEG CYIVP++HT ASTA DE+VW EI++F+ L +M
Sbjct: 673 KCPFCLESEEMKKHLIVALGLKVYLCVPQ-TRCISEGQCYIVPMQHTVASTALDEDVWAEIQVFRKGLTRM 742
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: UPI0018D85377 (CWF19-like protein 2 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D85377) HSP 1 Score: 74.3 bits (181), Expect = 7.030e-14 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
+C C+DS +K L+++LG YL L L+EGHC IVP++HT AST DE+VW E+++++ L KM
Sbjct: 733 KCPFCLDSPEMQKHLIIALGIKVYLCLPAA-QSLTEGHCLIVPMQHTVASTVLDEDVWNEVQIYRKGLTKM 802
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: A0A8B7Z042_ACAPL (CWF19-like protein 2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z042_ACAPL) HSP 1 Score: 74.3 bits (181), Expect = 7.040e-14 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 4 CHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
C C+DS +K L+++LG YL L + L++GHC IVP++HT ASTA DE+VW E+++++ L KM
Sbjct: 737 CPFCLDSPEMQKHLIIALGIKVYLCLPA-SQSLTDGHCLIVPMQHTVASTALDEDVWNEVQIYRKGLTKM 805
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Match: A0A7M7NLA5_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NLA5_STRPU) HSP 1 Score: 73.9 bits (180), Expect = 9.600e-14 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 RCHVCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKM 213
+C C++S KK L+++LG YL + T +SEG CYIVP++H ASTA DE+VW EI++F+ L +M
Sbjct: 683 KCSFCLESEEMKKHLIVALGLKVYLCVPQ-TRCISEGQCYIVPMQHAVASTALDEDVWAEIQVFRKGLTRM 752 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12951.2237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12951.2237.1 >prot_E-fasciculatus_F_contig12951.2237.1 ID=prot_E-fasciculatus_F_contig12951.2237.1|Name=mRNA_E-fasciculatus_F_contig12951.2237.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=66bp MDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEback to top mRNA from alignment at E-fasciculatus_F_contig12951:557..1538+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12951.2237.1 ID=mRNA_E-fasciculatus_F_contig12951.2237.1|Name=mRNA_E-fasciculatus_F_contig12951.2237.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=982bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12951:557..1538+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12951:557..1538+ >mRNA_E-fasciculatus_F_contig12951.2237.1 ID=mRNA_E-fasciculatus_F_contig12951.2237.1|Name=mRNA_E-fasciculatus_F_contig12951.2237.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=396bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12951:557..1538+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |