mRNA_E-fasciculatus_F_contig1295.2234.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: A0A6H5JAX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAX8_9PHAE) HSP 1 Score: 435 bits (1119), Expect = 4.380e-146 Identity = 246/299 (82.27%), Postives = 255/299 (85.28%), Query Frame = 3
Query: 594 QMYFFGWGFYALGHDDTLERRLTGQPARTQTSSTKASXXXXXXXXXXXXRQGHGGIGRISAAESVAIDIEPCTGEESNSEETTNAGDTGGSGDESEGDRWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNPRSVLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVATSSXXXXXXXXXXXXXXXXXXXRFRIIAGFLHVVCRLIVVPAIGFTVFWVARTQSSVMGENRLMHLLLLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
QMYFFGWGFYALGHDDTLER LTGQ RT+T STK XXXXX RQ HGG+GRI+AAE+V IDIEPCTGEES+SE TTNAG T GD SEG WAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDN RS+LRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVA +S RFRIIAGFLHVVCRLIVVPAIGFT+FWVARTQSSVMGENRLMHL+LLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY
Sbjct: 166 QMYFFGWGFYALGHDDTLERSLTGQQTRTRTPSTKXXXXXXXTSSTSSARQEHGGVGRINAAEAVVIDIEPCTGEESSSEGTTNAGGTEDGGDVSEGGPWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNSRSILRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVAAASTQGGQGDDDGTLRRKR---RFRIIAGFLHVVCRLIVVPAIGFTLFWVARTQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 461
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: D7FW26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW26_ECTSI) HSP 1 Score: 320 bits (820), Expect = 6.100e-101 Identity = 183/306 (59.80%), Postives = 214/306 (69.93%), Query Frame = 3
Query: 594 QMYFFGWGFYALGHDDTLERRLTGQPARTQTSSTK-----ASXXXXXXXXXXXXRQGHGGIGRISAAESVAIDIEPCTGEE--SNSEETTNAGDTGGSGDESEGDRWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNPRSVLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVATSSXXXXXXXXXXXXXXXXXXXRFRIIAGFLHVVCRLIVVPAIGFTVFWVARTQSSVMGENRLMHLLLLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
Q++F+ WGFYALG DD LER+L G+ A++ + +T +S RQ GG GR S A+ + E S + T A G GD+ WAG + R+ R++VSPN+I+V IGV IAMI LQE LFDNPR+VLRPLGAA++T+G+P VAVSTLVMAGSL QVPTV +S RFRI+ GFLHVVCRLIVVPA+GFT+FWVAR QSSVMGENRLMHL+LLIE AMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASM+TITAWTALAVHLVY
Sbjct: 166 QVWFYSWGFYALGQDDELERKLAGEAAKSPSEATTDDVEISSPCEIAQGDALPPRQAEGGSGRQSPTHDGAVVVGASRRNEGVSGTSGTAAASHAGKDGDDEGCCSWAGLRRRLWRLVVSPNMIAVAIGVTIAMIPALQEQLFDNPRAVLRPLGAAVETIGSPTVAVSTLVMAGSLVQVPTVGAASAAASQGGQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMVTITAWTALAVHLVY 471
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: A0A6H5J918_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J918_9PHAE) HSP 1 Score: 236 bits (601), Expect = 1.890e-66 Identity = 184/502 (36.65%), Postives = 217/502 (43.23%), Query Frame = 3
Query: 543 SHLLRTTGCAVRRCA-CRQMYFFGWGFYALGHDDTLERRLTGQPARTQTSSTK-----ASXXXXXXXXXXXXRQGHGGIGRISAAESVAIDIEPCTGEE--SNSEETTNAGDTGGSGDESEGDRWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNPRSVLRPLGAALQ----------------TVGTPEVAVSTLVMAGSLAQVPTVATSSXXXXXXXXXXXXXXXXXXXRFRIIAGFLHVVCRLIV------------------------------------------------------------------------------------------------------------------------------------------------------------------VPAIGFTVFWVARTQSSVMGENRLMHLLLLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
SH LR G + Q++F+ WGFYALG DD LER+L G+ A+ + +T +S Q GG G S A+ + E S + T A G GD++ WAG + R+ R+ VSPN+I+V IGV+IAM+ LQE+LFD+PR+VLRP GAA++ T+G+P VAVSTLVMAGSL QVPTV S RFRI+ GFLHVVCRLIV VPA+GFT+FWVAR QSSVMGENRLMHL+LLIE AMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY
Sbjct: 176 SHTLRRQGFSFHGYGQILQVWFYSWGFYALGQDDELERKLAGEEAKIPSEATTDDVEISSPCEIAQGDALPPLQADGGSGMQSPIHDGAVIVGASRRNEGVSGTGGTAVASHAGEDGDDAGCFSWAGLRRRLWRLAVSPNMIAVAIGVIIAMLPALQELLFDSPRAVLRPFGAAIEVGHCSLAATPVAIEQGTIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQCDDDGTLRRWRRFRIVVGFLHVVCRLIVGEHADPRAARFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 677
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: A0A6H5J8G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8G0_9PHAE) HSP 1 Score: 191 bits (484), Expect = 3.670e-50 Identity = 109/211 (51.66%), Postives = 142/211 (67.30%), Query Frame = 3
Query: 858 GGSGDESEGDRWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNPRSVLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVATSSXXXXXXXXXXXXXXXXXXXRFRIIAGFLHVVCRLIVVPAIGFTVFWVARTQSSVMGENRLMHLLLLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
GG G +SEG W K R +LVSP I++V G+VI I PLQ+MLF NP+++LRPLG A+Q VG P V VS+LVMAGSL V VA + R R + GFL V RL+ +PA F +FWVA+T SSVMGENRLMHL+LL+EFAMP+A +I L+Q+R+P TAGF++RL +WQY AS +T++ WTALA+ ++Y
Sbjct: 417 GGRGSDSEGP-WEEAKHRAWALLVSPVIVAVVAGIVICTIEPLQDMLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVADEAAPPAGGNEVAVPIWR----RPRFVTGFLLVFLRLVAIPAAFFGIFWVAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTALAITMLY 622
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: D7FW24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW24_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.500e-41 Identity = 87/166 (52.41%), Postives = 112/166 (67.47%), Query Frame = 3
Query: 993 MLFDNPRSVLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVATSSXXXXXXXXXXXXXXXXXXXRFRIIAGFLHVVCRLIVVPAIGFTVFWVARTQSSVMGENRLMHLLLLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
MLF NP+++LRPLG A+Q VG P V VS+LVMAGSL V VA + R R + GFL V RLI +PA F VFW A+T SSVMGENRLMHL+LL+EFAMP+A +I L+Q+R+P TAGF++RL +WQY AS +T++ WTA A+ ++Y
Sbjct: 1 MLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVANGAAPSAGGHEAAVPIWR----RPRFVMGFLLVFLRLIAIPAAFFGVFWGAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTAFAITMLY 162
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: A0A836C7K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K1_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.480e-15 Identity = 74/231 (32.03%), Postives = 110/231 (47.62%), Query Frame = 3
Query: 909 RVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNPRSVLRPLGAALQTVGTPEVAVSTLVMAGSLAQ--------VPTVATSSXXXXXXXXXXXXXXXXXXXRFRIIAGFLHVVCRLIVVPAIGFTVFWVARTQSSVMGE-NRLMHLLLLIEFAM----------------------------PSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
++ R +P I+V +GV+I +I PL LF N RS LRP+GAA+ TVG P VA++TL+MA SLAQ PTV + R I + V C L+VVP +GF +F + ++ LM LL++ + PS VI+SL+Q+ +PA A +AR+Y++QY S++T+T AL + +Y
Sbjct: 397 QLKRAASTPPNIAVALGVIIGLIPPLANGLFHNSRSPLRPIGAAMVTVGQPYVAIATLLMASSLAQSRKNAALPTPTVVGTEVMDAAQLHNAQQEQA----RREKITMLVLVFCPLVVVPMLGFGIFAFLDNYTPILNSATPLMKLLIIFQVTTTSMLRLMVEIXXXXXXXXXXXXXXXXXXPSGLSVIISLSQMHLPAMASSLARMYMYQYLLSIITLTVLAALTMAYIY 623
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: A0A7S4E2T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2T5_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.370e-12 Identity = 62/193 (32.12%), Postives = 99/193 (51.30%), Query Frame = 3
Query: 918 RVLVSPNIISVTIGVVIAMIAPLQEMLF--DNPRSVLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVATSSXXXXXXXXXXXXXXXXXXXRFRIIAGFLHVVCRLIVVPAIGFTVFWVARTQSSVMGENRLMHLLLLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
R+ + PN+I + GV+I PL+ +LF D P LRP+G AL+T+G P VAV+ ++MA +LA + R + ++ RL++VP I + +F V R+ L++L+E AMP A V+V+LN + A +A Y QY +++T+TA+T A+H+VY
Sbjct: 199 RLFLQPNMIGMYAGVIIGA-TPLRRLLFRGDTP---LRPIGLALETLGAPVVAVTVMIMAAALANGHARRRRTKREFSSVVENNSHASKEDTR-DVATAVWFILARLVIVPVIAYPIFSVINLPG-----GRMTTLIILLELAMPGAQTVLVTLNAVGSGHVAEEIAPWYFLQYATAIVTLTAFTVWALHIVY 381
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: A0A835Z6D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D5_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.680e-11 Identity = 85/274 (31.02%), Postives = 124/274 (45.26%), Query Frame = 3
Query: 891 WAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNPRSVLRPLGAALQTVGTPEVAVSTLVMAG------------------------------------------SLAQVP--------------------------TVATSSXXXXXXXXXXXXXXXXXXX-----RFRIIAGFLHVVCRLIVVPAIGFTVFWVARTQSSVM-GENRLMHLLLLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
W G V R +VSP ++V +GV I ++ L+E +F + S LRP+GAA+ T+G P +A+ TL+MA S Q P ++A S XXXXXXXXXX R ++ + V+ L+VVPA+GF F + ++ + G L+ LL+L++ MP A VIV L+ L +P A +ARLYL+QY AS+ T+TA A+A+ VY
Sbjct: 281 WLGGAGGVWRAVVSPPNVAVLLGVTIGVVPALREGMFHDATSPLRPIGAAIVTIGQPTIALQTLLMAARSSSTSPSSDHGTCISTCDRAARSSSSGAAPLSLHSCWVRRESCHQAPYWRRMTFKCTHSHCAPSLPPHSPPPRSLAHSHGRLQLAAAXXXXXXXXXXAQRSLRRSEVLTAAVFVLVPLVVVPAVGFAAFVLLHDNTAFLRGAPPLLQLLILLQLGMPGAQAVIVGLSHLALPRMAAALARLYLYQYVASIATLTALAAVAMMYVY 554
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Match: A0A8J2SPR5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPR5_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.410e-5 Identity = 62/203 (30.54%), Postives = 102/203 (50.25%), Query Frame = 3
Query: 906 ERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFD-NPRSVLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVATSSXXXXXXXXXXXXXXXXXXXRFR-------IIAGFLHVVCRLIVVPAIGFTVFWVARTQSSVMGENRLMHLLLLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1490
E V + P ++ +G I +IAPL+ LF RS LR +G ++ + +P V V+ L++ SLA V A ++ + II+GF VV RL+VVPAI + +A T + + + RL +LLI MP+A +IV L++ + A ++ L+++QY AS+ T+TA + ++ VY
Sbjct: 196 EAVGSCVREPINAALAVGTAIGLIAPLRRGLFSVGGRSPLRIIGGTVELLASPTVCVAVLLVGASLANVDLNALAAPDKSARDAEAPPPPPAKRSVWGAVYAVRGIISGF--VVVRLLVVPAIVGALEALA-TATIPIPQARLGRAVLLISSGMPTAQIMIVLLHKFGLSQQASELSFLFVFQYAASIPTMTALISSVLNRVY 395 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1295.2234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1295.2234.1 >prot_E-fasciculatus_F_contig1295.2234.1 ID=prot_E-fasciculatus_F_contig1295.2234.1|Name=mRNA_E-fasciculatus_F_contig1295.2234.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=299bp MYFFGWGFYALGHDDTLERRLTGQPARTQTSSTKASAAARATSSTSSARQback to top mRNA from alignment at E-fasciculatus_F_contig1295:3774..6915+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1295.2234.1 ID=mRNA_E-fasciculatus_F_contig1295.2234.1|Name=mRNA_E-fasciculatus_F_contig1295.2234.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3142bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1295:3774..6915+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1295:3774..6915+ >mRNA_E-fasciculatus_F_contig1295.2234.1 ID=mRNA_E-fasciculatus_F_contig1295.2234.1|Name=mRNA_E-fasciculatus_F_contig1295.2234.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1794bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1295:3774..6915+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |