mRNA_E-fasciculatus_F_contig12943.2231.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.530e-16 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 2
Query: 5 RTRCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
RTRCLDAF +AL QAC GG+KRWY STLELQLTSLD+CRAC
Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRAC 48
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 5.430e-14 Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 2
Query: 2 GRTRCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
G TR DAFA+AL QAC GG+KRWY ST ELQL SLD+CRAC
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRAC 46
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 8.430e-13 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 2
Query: 2 GRTRCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
G ++CLDAF VAL QAC G +KRWYVSTLELQL SL++C AC
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGAC 46
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 8.610e-13 Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 2
Query: 5 RTRCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
R++CLDAF VAL Q C G +KRWY STLELQL SL+ C AC
Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGAC 78
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 1.600e-11 Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 2
Query: 2 GRTRCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRA 124
G T+C DAF VAL QAC GG KR Y STLEL L SLD+CRA
Sbjct: 18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRA 58
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 6.500e-11 Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 2
Query: 2 GRTRCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
GR+ CL AF VAL Q C G +KRWY STLELQL SL+ C AC
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGAC 54
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 9.150e-11 Identity = 30/42 (71.43%), Postives = 32/42 (76.19%), Query Frame = 2
Query: 2 GRTRCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
GR+ CLDAF VAL QA G KRWYVSTLELQL SL+ C AC
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGAC 66
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 3.190e-10 Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 2
Query: 11 RCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
RCLDAF VAL Q GG+KRWY STL+LQL SL+ C AC
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGAC 46
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 2.330e-9 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 2
Query: 17 LDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
LD VAL QAC G +KRWYVSTLELQL SL++C AC
Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGAC 126
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 1.690e-8 Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 2
Query: 2 GRTRCLDAFAVALGQACGGGKKRWYVSTLELQLTSLDMCRAC 127
G +RCLDAF VAL QAC GG WYVST +LQL+SL C AC
Sbjct: 26 GPSRCLDAFKVALNQACDGGG--WYVSTEQLQLSSLPFCVAC 65 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12943.2231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12943.2231.1 >prot_E-fasciculatus_F_contig12943.2231.1 ID=prot_E-fasciculatus_F_contig12943.2231.1|Name=mRNA_E-fasciculatus_F_contig12943.2231.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=43bp RAYPVPRCLRRRLGPSMRGREEALVCLDTGAAADLVGHVQGVPback to top mRNA from alignment at E-fasciculatus_F_contig12943:3694..3822+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12943.2231.1 ID=mRNA_E-fasciculatus_F_contig12943.2231.1|Name=mRNA_E-fasciculatus_F_contig12943.2231.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=129bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12943:3694..3822+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12943:3694..3822+ >mRNA_E-fasciculatus_F_contig12943.2231.1 ID=mRNA_E-fasciculatus_F_contig12943.2231.1|Name=mRNA_E-fasciculatus_F_contig12943.2231.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=258bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12943:3694..3822+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |