mRNA_E-fasciculatus_F_contig1294.2229.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1294.2229.1
Unique NamemRNA_E-fasciculatus_F_contig1294.2229.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: D7G0H6_ECTSI (Protein disulfide isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H6_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 1.100e-176
Identity = 283/437 (64.76%), Postives = 305/437 (69.79%), Query Frame = 2 
Query:  164 MICLPARLVVAAATVVVNSVLGATASGVVNVGIVEDLNFVDLADAVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAGHLDANGIAAHLAMLERDRRRLLEHQKKYGNPATKRVGDSTGGGGDGSGAPVLGISKPELDESGVILVSLAGRSNTAADVSGRSSSRTMSLADRFRAAVGQDGASLVLFAPEFSPKALRMTTEIRKAAPILALRGAPTKVILVDLHTPGDSGDDDGGRGTAVLHGDGSRRRQGSSRSGDPALPAGTEDILARRQLAADVGITFGDGPELRIFLDGRLWVEGGVFRGLPTSDGILQHMDWVTEEAGLRPQHEKATMEATQGGGRSTSDDRLIITTSVAATAESSLNVSSEACTASSRCTNHAGGVTCQDED 1474
            M+ LPARL+VAAAT+VVNS+L AT +GVVNV IVEDLNF DLADAVQ +PFL VAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGM+AWKAFGLK++PTVKVFVGNNP+EPLPYAGHLDANGIAAHLAMLER R                                                                                                   R+  EIRKAAPILALR  PTKVILVD       G DDG RGTAVLH DGSRRRQGSSRSGDPALPAGTEDILA+RQLAAD+G+TFG+GPELRIFLDGRLWVEGGVFRGLPT+DGILQHMDWV +EAGL PQHE+ATM+ATQGGGRST D   I+ T VA TA+S +NVSSEAC ASSRCTNHAGGVTCQDED
Sbjct:    1 MVYLPARLMVAAATMVVNSILAATTTGVVNVEIVEDLNFTDLADAVQGHPFLVVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMNAWKAFGLKRLPTVKVFVGNNPDEPLPYAGHLDANGIAAHLAMLERAR---------------------------------------------------------------------------------------------------RLIKEIRKAAPILALRDPPTKVILVDFQNASGGGGDDGSRGTAVLHEDGSRRRQGSSRSGDPALPAGTEDILAKRQLAADIGVTFGEGPELRIFLDGRLWVEGGVFRGLPTTDGILQHMDWVADEAGLLPQHERATMKATQGGGRSTFDGHQIMATPVA-TADSLVNVSSEACPASSRCTNHAGGVTCQDED 337
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: A0A091IKS5_CALAN (Protein disulfide-isomerase (Fragment) n=2 Tax=Calypte anna TaxID=9244 RepID=A0A091IKS5_CALAN)

HSP 1 Score: 82.0 bits (201), Expect = 4.390e-13
Identity = 36/95 (37.89%), Postives = 60/95 (63.16%), Query Frame = 2 
Query:  284 DLADAVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAGHLDANGI 568
            + A A++ +  L V FY+P CGHC+RL P++ QAA ++ ++ +P+RLA++D +++  +   K F +   PT+K+F   N   PL Y G +D  GI
Sbjct:   13 NFARALKEHQLLLVEFYAPWCGHCQRLAPAFAQAATMLRNESIPVRLAKVDATAQVALA--KEFNITSYPTLKLFQHGNRTHPLAYTGRMDTEGI 105
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: C1MRN2_MICPC (Protein disulfide-isomerase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MRN2_MICPC)

HSP 1 Score: 79.0 bits (193), Expect = 5.760e-12
Identity = 46/122 (37.70%), Postives = 68/122 (55.74%), Query Frame = 2 
Query:  245 VVNVGIVEDLNFVDLADAVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLI-----EDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPN--EPLPYAGHLDANGIAAHLAML 589
            V N G V +L+      AV+ + F+AV FY+P CGHC+RL P W +AA+++     + +  PI LARMD +++        FG+K  PT+K+F     +  +   YAG   A+GI  HL  L
Sbjct:   23 VANPGHVLNLDARSFDAAVKEHAFVAVEFYAPWCGHCKRLEPEWAKAAEVLAANAKKTREPPIVLARMDAANQANSKIAADFGVKAFPTIKIFRNGEADTEDGEDYAGPRHADGIVEHLTKL 144
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: A0A091EH80_FUKDA (Protein disulfide-isomerase n=2 Tax=Fukomys damarensis TaxID=885580 RepID=A0A091EH80_FUKDA)

HSP 1 Score: 77.0 bits (188), Expect = 2.480e-11
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 2 
Query:  272 LNFVDLADAVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAGHLDANGIAAHL 580
            LN   L+ A+Q +  L V FY+P CGHC+ L P +++AA L+ED+ +P+ LA++D  +   +   + FG+ + PT+K F   N   P  Y G  +A GIA  L
Sbjct:   51 LNGSTLSWALQEHSALLVEFYAPWCGHCQALAPEYSKAAILLEDESVPVTLAKVDGPAEPDL--MEKFGVTEYPTIKFFQDGNHTHPEEYTGPREAEGIAEWL 151
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: A0A8C6J561_MELUD (Protein disulfide-isomerase n=2 Tax=Melopsittacus undulatus TaxID=13146 RepID=A0A8C6J561_MELUD)

HSP 1 Score: 72.8 bits (177), Expect = 5.220e-10
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = 2 
Query:  284 DLADAVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAG 547
            + A A+  +  L V FY+P CGHC+RL P++TQAA+ + ++  P RL ++D  ++  +   K FG+   PT+K+F   N   P+ Y G
Sbjct:   55 NFARALSEHRLLLVEFYAPWCGHCQRLAPAYTQAAEALRNESSPARLGKVDAMAQTALA--KEFGITSYPTLKLFRDGNRTHPIDYTG 140
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: A0A151P667_ALLMI (Protein disulfide-isomerase n=7 Tax=Crocodylia TaxID=1294634 RepID=A0A151P667_ALLMI)

HSP 1 Score: 69.3 bits (168), Expect = 7.170e-9
Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 2 
Query:  296 AVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAGHLDANGI 568
            A+  +  L V FY+P CGHC+ L P ++QAA +++++ L +RLA++D +    + A   FG+   P +K+F   N   P  Y G  D+ GI
Sbjct:   70 ALHEHRLLLVKFYAPWCGHCQALAPEYSQAAGILKNESLDLRLAKVDATEETVLSA--EFGVTGYPVLKLFRDGNRTHPTDYTGARDSQGI 158
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: A0A0H5R7P7_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R7P7_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 1.500e-8
Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 2 
Query:  251 NVGIVEDLNFVDLADAVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRG-GMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAGHLDANGIA 571
            N G+V DLN V LA  ++ +P + V FY+PGCGHC++L PS+ Q  +L++D  +   +A  DVS         + + L   PT+K+F+G  P   + Y+G+  A+ +A
Sbjct:   28 NSGVV-DLNSVTLAKTIKTHPVVLVEFYTPGCGHCQQLKPSYLQLPKLLKDIAV---VAAFDVSGNDKNGEIQRKYKLTGFPTIKLFLG--PKTIIDYSGNRQADDMA 129
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: E4WUS5_OIKDI (Protein disulfide-isomerase n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4WUS5_OIKDI)

HSP 1 Score: 67.8 bits (164), Expect = 1.960e-8
Identity = 35/107 (32.71%), Postives = 63/107 (58.88%), Query Frame = 2 
Query:  275 NFVDLAD-----AVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAGHLDANGIAAHL 580
            N +DL +     A++ +  L V F++P CGHC++L P +  AA  + ++  PIR+A++D ++ G +   + +G+   PT+K+F G    E   Y G  +A+GI A++
Sbjct:   17 NVLDLTESTFQGAIEQHDTLMVEFFAPWCGHCKKLAPEYESAADALNEEDPPIRIAKVDCTANGEL--CQKYGVSGYPTIKMFKG--AEESGKYEGARNADGITAYM 119
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: A0A830HZ76_9CHLO (Thioredoxin domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HZ76_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 4.220e-8
Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = 2 
Query:  314 FLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAGHLDANGI 568
            F  V FY+P CGHC+ L P W +AAQ++E    PIR+A++D  +   +     F ++  PT+KVF   +  E   Y G  +  GI
Sbjct:   56 FTLVEFYAPWCGHCKSLAPKWAEAAQILEKDDPPIRIAKLDADAHSELAG--RFDVQGYPTIKVFRSGSVEE---YNGPRETQGI 135
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BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Match: A0A1D1ZAU0_9ARAE (Protein disulfide-isomerase n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZAU0_9ARAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.140e-7
Identity = 32/103 (31.07%), Postives = 53/103 (51.46%), Query Frame = 2 
Query:  272 LNFVDLADAVQVYPFLAVAFYSPGCGHCRRLLPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVGNNPNEPLPYAGHLDANGIAAHL 580
            L+  + +D V  +PF+ V FY+P CGHC++L P + +AA ++     PI LA++D +          + +   PT+K+      N    Y G  D+ GI  +L
Sbjct:   53 LDSANFSDTVAKHPFIVVEFYTPWCGHCKKLAPEYEKAAAILSKHDPPIVLAKVDANDEVNKKLASKYEVNGYPTLKILKNEGKNIQ-EYKGPRDSEGIVEYL 154
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1294.2229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0H6_ECTSI1.100e-17664.76Protein disulfide isomerase n=1 Tax=Ectocarpus sil... [more]
A0A091IKS5_CALAN4.390e-1337.89Protein disulfide-isomerase (Fragment) n=2 Tax=Cal... [more]
C1MRN2_MICPC5.760e-1237.70Protein disulfide-isomerase n=1 Tax=Micromonas pus... [more]
A0A091EH80_FUKDA2.480e-1138.83Protein disulfide-isomerase n=2 Tax=Fukomys damare... [more]
A0A8C6J561_MELUD5.220e-1037.50Protein disulfide-isomerase n=2 Tax=Melopsittacus ... [more]
A0A151P667_ALLMI7.170e-936.26Protein disulfide-isomerase n=7 Tax=Crocodylia Tax... [more]
A0A0H5R7P7_9EUKA1.500e-837.04Uncharacterized protein n=1 Tax=Spongospora subter... [more]
E4WUS5_OIKDI1.960e-832.71Protein disulfide-isomerase n=2 Tax=Oikopleura dio... [more]
A0A830HZ76_9CHLO4.220e-837.65Thioredoxin domain-containing protein n=1 Tax=Pycn... [more]
A0A1D1ZAU0_9ARAE1.140e-731.07Protein disulfide-isomerase n=1 Tax=Anthurium amni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1294contigE-fasciculatus_F_contig1294:11424..15605 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score79.3
Seed ortholog evalue5.2e-12
Seed eggNOG ortholog38833.XP_003058538.1
Preferred namePDIL1-1
KEGG koko:K09580
KEGG Pathwayko04141,map04141
GOsGO:0000003,GO:0000322,GO:0000323,GO:0000325,GO:0000326,GO:0000327,GO:0003006,GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005788,GO:0005794,GO:0005886,GO:0006457,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0009314,GO:0009416,GO:0009505,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009642,GO:0009644,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0009790,GO:0009791,GO:0009793,GO:0009888,GO:0009892,GO:0009960,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010109,GO:0010154,GO:0010205,GO:0010941,GO:0012505,GO:0016020,GO:0016853,GO:0016860,GO:0016864,GO:0019222,GO:0022414,GO:0030312,GO:0031090,GO:0031323,GO:0031324,GO:0031974,GO:0032501,GO:0032502,GO:0033554,GO:0034975,GO:0034976,GO:0042221,GO:0042548,GO:0043067,GO:0043155,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043467,GO:0044422,GO:0044424,GO:0044432,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0048316,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0061458,GO:0065007,GO:0070013,GO:0071944,GO:0098588,GO:0098805,GO:0140096,GO:1905156
EggNOG free text desc.Thioredoxin-like domain
EggNOG OGs34KHF@3041,37R3F@33090,COG0526@1,KOG0190@2759
EC5.3.4.1
COG Functional cat.O
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03110,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons7
Model size1477
Cds size1413
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1294.2229.1prot_E-fasciculatus_F_contig1294.2229.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1294 11424..15541 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927798.4704819-CDS-E-fasciculatus_F_contig1294:11423..116271622927798.4704819-CDS-E-fasciculatus_F_contig1294:11423..11627Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 11424..11627 -
1695995699.337594-CDS-E-fasciculatus_F_contig1294:11423..116271695995699.337594-CDS-E-fasciculatus_F_contig1294:11423..11627Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 11424..11627 -
1622927798.4850276-CDS-E-fasciculatus_F_contig1294:12374..124741622927798.4850276-CDS-E-fasciculatus_F_contig1294:12374..12474Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 12375..12474 -
1695995699.351027-CDS-E-fasciculatus_F_contig1294:12374..124741695995699.351027-CDS-E-fasciculatus_F_contig1294:12374..12474Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 12375..12474 -
1622927798.499879-CDS-E-fasciculatus_F_contig1294:12951..132431622927798.499879-CDS-E-fasciculatus_F_contig1294:12951..13243Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 12952..13243 -
1695995699.3617065-CDS-E-fasciculatus_F_contig1294:12951..132431695995699.3617065-CDS-E-fasciculatus_F_contig1294:12951..13243Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 12952..13243 -
1622927798.5155146-CDS-E-fasciculatus_F_contig1294:13643..139291622927798.5155146-CDS-E-fasciculatus_F_contig1294:13643..13929Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 13644..13929 -
1695995699.3723876-CDS-E-fasciculatus_F_contig1294:13643..139291695995699.3723876-CDS-E-fasciculatus_F_contig1294:13643..13929Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 13644..13929 -
1622927798.531242-CDS-E-fasciculatus_F_contig1294:14203..142961622927798.531242-CDS-E-fasciculatus_F_contig1294:14203..14296Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 14204..14296 -
1695995699.3834372-CDS-E-fasciculatus_F_contig1294:14203..142961695995699.3834372-CDS-E-fasciculatus_F_contig1294:14203..14296Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 14204..14296 -
1622927798.5442138-CDS-E-fasciculatus_F_contig1294:14661..148591622927798.5442138-CDS-E-fasciculatus_F_contig1294:14661..14859Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 14662..14859 -
1695995699.3938615-CDS-E-fasciculatus_F_contig1294:14661..148591695995699.3938615-CDS-E-fasciculatus_F_contig1294:14661..14859Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 14662..14859 -
1622927798.5540051-CDS-E-fasciculatus_F_contig1294:15301..155411622927798.5540051-CDS-E-fasciculatus_F_contig1294:15301..15541Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 15302..15541 -
1695995699.4048307-CDS-E-fasciculatus_F_contig1294:15301..155411695995699.4048307-CDS-E-fasciculatus_F_contig1294:15301..15541Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1294 15302..15541 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927798.5644326-UTR-E-fasciculatus_F_contig1294:15541..156051622927798.5644326-UTR-E-fasciculatus_F_contig1294:15541..15605Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1294 15542..15605 -
1695995699.4164665-UTR-E-fasciculatus_F_contig1294:15541..156051695995699.4164665-UTR-E-fasciculatus_F_contig1294:15541..15605Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1294 15542..15605 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1294.2229.1

>prot_E-fasciculatus_F_contig1294.2229.1 ID=prot_E-fasciculatus_F_contig1294.2229.1|Name=mRNA_E-fasciculatus_F_contig1294.2229.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=471bp
MYPLQQKLSLKAELKRLGGPGVRAFRPCYNDLVMICLPARLVVAAATVVV
NSVLGATASGVVNVGIVEDLNFVDLADAVQVYPFLAVAFYSPGCGHCRRL
LPSWTQAAQLIEDQRLPIRLARMDVSSRGGMHAWKAFGLKKVPTVKVFVG
NNPNEPLPYAGHLDANGIAAHLAMLERDRRRLLEHQKKYGNPATKRVGDS
TGGGGDGSGAPVLGISKPELDESGVILVSLAGRSNTAADVSGRSSSRTMS
LADRFRAAVGQDGASLVLFAPEFSPKALRMTTEIRKAAPILALRGAPTKV
ILVDLHTPGDSGDDDGGRGTAVLHGDGSRRRQGSSRSGDPALPAGTEDIL
ARRQLAADVGITFGDGPELRIFLDGRLWVEGGVFRGLPTSDGILQHMDWV
TEEAGLRPQHEKATMEATQGGGRSTSDDRLIITTSVAATAESSLNVSSEA
CTASSRCTNHAGGVTCQDED*
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mRNA from alignment at E-fasciculatus_F_contig1294:11424..15605-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1294.2229.1 ID=mRNA_E-fasciculatus_F_contig1294.2229.1|Name=mRNA_E-fasciculatus_F_contig1294.2229.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4182bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1294:11424..15605- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTCATTATGTACCCAGTTATTTTCGAATGTGAAAACCGTGTGGACAAAT
ATGTAGACATGTAGATGTACCCTCTACAGCAGAAGCTCTCGTTGAAAGCG
GAACTCAAGAGGCTGGGCGGACCCGGAGTAAGGGCATTTCGTCCGTGTTA
TAACGACCTGGTCATGATTTGCCTACCCGCGAGGCTGGTGGTAGCAGCGG
CAACCGTGGTTGTCAACAGCGTTCTCGGTGCTACTGCATCTGGTGTAGTT
AATGTGGGGATTGTCGAAGATCTGAACTTTGTCGACCTGGCCGACGCTGT
GCAGGTAAGCGCCCCCGTTTAGAGTGAAACCGAGATGAAAAGCTGTGTAC
CGTACCCTCTGCGCTCGACCTTGACATGCACATGTGTATCGCGCATGAGC
ATTATCTGATGCACGCCGGCTGGCCTGCACACCAACGGCAGCACAAAACA
TTGCGAGAACACCGACTACGAAAGGTGAGAGATCTAGACTATTCGCTGTA
TGTGCTCCCGTCATACAACGAAGTACACGTTTCCACATACGACGAGCCGT
GGAGATCAGCCAGATACTGCCAAGATCCACAGGCAGCTGTATCGTTGGGG
AATCATGCCTCTTGTTCCAACACATGCCCTTCAATAGAACAACAGCGCTA
ATCATCAGCGTTGAAAGATTGATGGAATGTGTAGCCTACCCCCGAAAGCA
GGCCTGATCGACTCCTCCTAGGACAATACTATTCCATTGCATGTAGGTGT
ACCCCTTCTTGGCTGTTGCGTTCTACTCTCCGGGGTGCGGGCACTGCCGA
CGGCTTCTCCCGAGTTGGACTCAAGCGGCCCAGCTGATAGAGGACCAACG
TTTACCCATTCGACTCGCGAGGATGGACGTTTCGAGCAGGGGAGGAATGC
ACGCCTGGAAGGCATTTGGGTTGAAGAAGGTGCCCACGGTGAAGGTGATC
AGTGTAATGTTATTGTAGTCTAGCGATCAGCACTCCAGACGGTGCTCGGA
TGGCCTGTTGCTGGGGCGCCTAGTCTCGCTCACACGGCTGCTCTCCGATT
CTACCACATAGTCAAACCTTCCTTAGGGTGGAATAAAAACACGGACGTTT
TCAACCGAAGGAGCTTTCGATACTCCGGAGGCGTAGTTGTATAGCGGCTG
TGGTGGCCCCCTTGCTGCCTTCGCGATGCAACGTTGTTTGGTAATGGCGT
CGATACCTCCGACGGTTTCGTCCCTCCGTTCCTCGCTATTCGGGGCTACA
TGATCGAGCGCTTAAATATATTGCTGCTCATGCTCTTGGGCATCGACAAA
CTTCCTCAGGTATTTGTCGGAAACAATCCCAATGAGCCTCTGCCATACGC
CGGCCACCTCGATGCTAACGGCATAGCGGCGCATCTGGCGATGTTGGAAA
GGGTGAGTTTCCAGACATAAATTCTTAGTGTTGATCACCCCCACGTATTT
TGGCGCCTTCCGCCAACAGCTAAGTTTTCTGTCCAAAGGGAGTAAAGGTA
CTGTAGTAGTGTACGGTCTGCTTGGTCTAAAGTATCATTGGTGGAAACGA
TCCTGAGCAGGTCCGGGATATCATCCCTCTGTGGTGGCGTCGTAGAGCCG
CAGCTGCATGCCCACCAACTTTACGCTCTTTCCTCGCCAACCCTGGTTAT
ATCAACACCGATGAAACGTGGCGAAGGACCGGAGGCGCCTGCTCGAACAC
CAAAAGAAGTACGGCAACCCCGCGACAAAAAGAGTTGGAGATTCCACCGG
GGGTGGCGGTGACGGAAGTGGCGCGCCCGTCCTGGGAATCTCAAAGCCCG
AGCTGGACGAGTCGGGCGTGATCCTCGTGTCGCTTGCGGGTAGATCAAAT
ACTGCCGCTGATGTGTCGGGGCGCTCATCTTCGCGGACGATGTCGCTCGC
CGATAGGTTTCGGGCGGCTGTTGGACAGGATGGAGCTTCTTTGGTACTGT
TCGCGCCGGAATGTGAGCCGAGGTTGTCTCGAATGTGTGGCACCATGCTC
GCACGCCGTAGATGACAAGACAATACCATTTCCCTCTCCGCGGCTGGGAA
TTTCTCGGCCGGATGAAACACGATGAAACACGGACACACGAGATGCGGGT
GCAATGATCAAAAGGAAAGATTTATGCATTGGTCAGGAGGGACGGTTTAC
GTGTTGTCGTAGCGGACAGTTGCGTGAGAAATGACAAGTTTGATCCCAAG
TTACTGTACAAATAGATGTCTATGTGCCTCCCCAACCCTGCTCACACTTA
GAGCGATTCAAGCCTCTACAGAGCCGAGCGTGCTCTCTTCTCTTGGAACG
CGTCACCCTGCCTCGCCCACCAATCTCCCATCCCCCCCGACCGCCCTTTC
GCGCCGCGAAAGTTTCCCCGAAGGCCCTGCGCATGACAACGGAGATCCGG
AAGGCGGCGCCAATCCTGGCCTTGCGGGGGGCCCCGACGAAGGTCATACT
CGTCGACCTCCACACCCCTGGCGACAGCGGTGATGATGATGGCGGTCGCG
GTACAGCAGTGCTCCACGGAGACGGGAGTCGGAGAAGACAGGGAAGCAGC
CGTAGCGGCGATCCAGCTCTTCCAGCCGGTACAGAGGACATCTTGGCCAG
GCGGCAGCTGGCGGCGGACGTCGGGATCACCTTCGGAGACGGGCCGGAGC
TTAGGTACCACTCGCTGTACAGCACCTGCTCTAATTAACGGATACCATAC
CTTCGCTTCATCTCCAGCAACGTTGCATGGTGTGTGCTTCGTCCAAGCGG
TCTCGGTGTATGTAGAACCGTCTTGGACCTACATTTTTGGGAATTTCATC
GTGGCACTTGTACTGACTACCCATCTCTGACCATCAGGACGTGGGTACTC
GGATTAGTCAAGCTAACACGTGTGGCTCGCGGAGTCTAATGAACGCCCCC
GGGCATATGCATGTATCTCGATCACGATGAACGAACGGCCCTGGGCTTAT
CCGTGTATCTCGATCATGATCGTCGGGGATTTGCTGACCACGGTGCTATT
TAGAGTACGTCGCCTCAACAAGCACCCCTAGGCCAACAAGCTGGGGACAG
TTGTACTGCTGCGCGTACCGTACCTCATACCAACACCTTCAATACCCGCC
TCGATTGCCACGCCTGATTCCGTATCTGTAGGATTTTTCTTGACGGGAGG
CTTTGGGTCGAAGGAGGCGTGTTTCGGGGCTTGCCTACCAGCGACGGGAT
CTTGCAACACATGGACTGGGTTACGGAGGAGGTAAAGAACGTTTCGACCA
CGAGTGAAGTATCTGCTGCTTGAGCTCTCATTGAGGAGGCACAGGCTAGA
AAAAACATTCCTATAGTGCCATGAGACCAAAGACACCTTTGTCGGGCTTT
TCACGGCCGTTCGCTTTCTCGCGAGCCTACTTTCATCCACCGACCTCATG
CCGTGTAGCGTGCACGTTGACTCGTCGCGAGAAGATAGTAATAAAATATT
TTTTCTTCATCCCGCCTAGGCTTCTGAGGGTACTCCAGTCTCGCGGCGTT
CTCGCGTTTGATCCACTTTCGGCATCCAACACGAAACCCAAAGGACGGGA
TCGCGCCAGTCGTGTGCACTTGTGCACTGGCGGCAGCAAGCATAACATGC
GACCTACACGTAGAGGATCATTTCCCTCACGATACCACTCTTGTGCAGGG
CTCCCGGATATCAACGCTTTACATCATTCAAAGAGCGAACGCAGAGATAG
CTAGAGACACGCATTCACGGCTGACTATACCCCCCATGCGAGGTTCCTCT
ACATGTCGCTGCTATGGTACGGTGGTATTCCGTGTACCATGTCATGATGC
TTTGCGCATGCTTCCGAAACCAAGGCCACCAAATGTGAGCGTAGCCCAAA
AACCTCGACAACAGACCTACGCTCTCTCATGCATGCTTGCTGATCGGTGG
GTCGAGCTTCGAGAGATAAAACAACAAATACGTGTCCTACGTCCCCCCTG
CCTGGCCTTACTCTGTTATCGATCGCAGGCCGGGCTTCGACCGCAACACG
AAAAAGCGACGATGGAGGCTACTCAAGGGGGTGGAAGATCTACGTCTGAC
GACCGGCTAATCATCACGACATCCGTAGCGGCCACGGCGGAGAGCTCGCT
AAACGTCTCATCAGAAGCCTGCACCGCATCCTCGCGTTGTACTAACCACG
CCGGGGGCGTCACGTGCCAGGACGAGGACTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1294:11424..15605-

>mRNA_E-fasciculatus_F_contig1294.2229.1 ID=mRNA_E-fasciculatus_F_contig1294.2229.1|Name=mRNA_E-fasciculatus_F_contig1294.2229.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2826bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1294:11424..15605- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTACCCTCTACAGCAGAAGCTCTCGTTGAAAGCGGAACTCAAGAGGCT
GGGCGGACCCGGAGTAAGGGCATTTCGTCCGTGTTATAACGACCTGGTCA
TGATTTGCCTACCCGCGAGGCTGGTGGTAGCAGCGGCAACCGTGGTTGTC
AACAGCGTTCTCGGTGCTACTGCATCTGGTGTAGTTAATGTGGGGATTGT
CGAAGATCTGAACTTTGTCGACCTGGCCGACGCTGTGCAGATGTACCCTC
TACAGCAGAAGCTCTCGTTGAAAGCGGAACTCAAGAGGCTGGGCGGACCC
GGAGTAAGGGCATTTCGTCCGTGTTATAACGACCTGGTCATGATTTGCCT
ACCCGCGAGGCTGGTGGTAGCAGCGGCAACCGTGGTTGTCAACAGCGTTC
TCGGTGCTACTGCATCTGGTGTAGTTAATGTGGGGATTGTCGAAGATCTG
AACTTTGTCGACCTGGCCGACGCTGTGCAGGTGTACCCCTTCTTGGCTGT
TGCGTTCTACTCTCCGGGGTGCGGGCACTGCCGACGGCTTCTCCCGAGTT
GGACTCAAGCGGCCCAGCTGATAGAGGACCAACGTTTACCCATTCGACTC
GCGAGGATGGACGTTTCGAGCAGGGGAGGAATGCACGCCTGGAAGGCATT
TGGGTTGAAGAAGGTGCCCACGGTGAAGGTGTACCCCTTCTTGGCTGTTG
CGTTCTACTCTCCGGGGTGCGGGCACTGCCGACGGCTTCTCCCGAGTTGG
ACTCAAGCGGCCCAGCTGATAGAGGACCAACGTTTACCCATTCGACTCGC
GAGGATGGACGTTTCGAGCAGGGGAGGAATGCACGCCTGGAAGGCATTTG
GGTTGAAGAAGGTGCCCACGGTGAAGGTATTTGTCGGAAACAATCCCAAT
GAGCCTCTGCCATACGCCGGCCACCTCGATGCTAACGGCATAGCGGCGCA
TCTGGCGATGTTGGAAAGGGTATTTGTCGGAAACAATCCCAATGAGCCTC
TGCCATACGCCGGCCACCTCGATGCTAACGGCATAGCGGCGCATCTGGCG
ATGTTGGAAAGGGACCGGAGGCGCCTGCTCGAACACCAAAAGAAGTACGG
CAACCCCGCGACAAAAAGAGTTGGAGATTCCACCGGGGGTGGCGGTGACG
GAAGTGGCGCGCCCGTCCTGGGAATCTCAAAGCCCGAGCTGGACGAGTCG
GGCGTGATCCTCGTGTCGCTTGCGGGTAGATCAAATACTGCCGCTGATGT
GTCGGGGCGCTCATCTTCGCGGACGATGTCGCTCGCCGATAGGTTTCGGG
CGGCTGTTGGACAGGATGGAGCTTCTTTGGTACTGTTCGCGCCGGAATGA
CCGGAGGCGCCTGCTCGAACACCAAAAGAAGTACGGCAACCCCGCGACAA
AAAGAGTTGGAGATTCCACCGGGGGTGGCGGTGACGGAAGTGGCGCGCCC
GTCCTGGGAATCTCAAAGCCCGAGCTGGACGAGTCGGGCGTGATCCTCGT
GTCGCTTGCGGGTAGATCAAATACTGCCGCTGATGTGTCGGGGCGCTCAT
CTTCGCGGACGATGTCGCTCGCCGATAGGTTTCGGGCGGCTGTTGGACAG
GATGGAGCTTCTTTGGTACTGTTCGCGCCGGAATTTTCCCCGAAGGCCCT
GCGCATGACAACGGAGATCCGGAAGGCGGCGCCAATCCTGGCCTTGCGGG
GGGCCCCGACGAAGGTCATACTCGTCGACCTCCACACCCCTGGCGACAGC
GGTGATGATGATGGCGGTCGCGGTACAGCAGTGCTCCACGGAGACGGGAG
TCGGAGAAGACAGGGAAGCAGCCGTAGCGGCGATCCAGCTCTTCCAGCCG
GTACAGAGGACATCTTGGCCAGGCGGCAGCTGGCGGCGGACGTCGGGATC
ACCTTCGGAGACGGGCCGGAGCTTAGTTTCCCCGAAGGCCCTGCGCATGA
CAACGGAGATCCGGAAGGCGGCGCCAATCCTGGCCTTGCGGGGGGCCCCG
ACGAAGGTCATACTCGTCGACCTCCACACCCCTGGCGACAGCGGTGATGA
TGATGGCGGTCGCGGTACAGCAGTGCTCCACGGAGACGGGAGTCGGAGAA
GACAGGGAAGCAGCCGTAGCGGCGATCCAGCTCTTCCAGCCGGTACAGAG
GACATCTTGGCCAGGCGGCAGCTGGCGGCGGACGTCGGGATCACCTTCGG
AGACGGGCCGGAGCTTAGGATTTTTCTTGACGGGAGGCTTTGGGTCGAAG
GAGGCGTGTTTCGGGGCTTGCCTACCAGCGACGGGATCTTGCAACACATG
GACTGGGTTACGGAGGAGGATTTTTCTTGACGGGAGGCTTTGGGTCGAAG
GAGGCGTGTTTCGGGGCTTGCCTACCAGCGACGGGATCTTGCAACACATG
GACTGGGTTACGGAGGAGGCCGGGCTTCGACCGCAACACGAAAAAGCGAC
GATGGAGGCTACTCAAGGGGGTGGAAGATCTACGTCTGACGACCGGCTAA
TCATCACGACATCCGTAGCGGCCACGGCGGAGAGCTCGCTAAACGTCTCA
TCAGAAGCCTGCACCGCATCCTCGCGTTGTACTAACCACGCCGGGGGCGT
CACGTGCCAGGACGAGGACTGAGCCGGGCTTCGACCGCAACACGAAAAAG
CGACGATGGAGGCTACTCAAGGGGGTGGAAGATCTACGTCTGACGACCGG
CTAATCATCACGACATCCGTAGCGGCCACGGCGGAGAGCTCGCTAAACGT
CTCATCAGAAGCCTGCACCGCATCCTCGCGTTGTACTAACCACGCCGGGG
GCGTCACGTGCCAGGACGAGGACTGA
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