mRNA_E-fasciculatus_F_contig12903.2198.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: D7FMG1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG1_ECTSI) HSP 1 Score: 407 bits (1045), Expect = 5.590e-136 Identity = 221/272 (81.25%), Postives = 230/272 (84.56%), Query Frame = 1
Query: 1 QEELCLRWILELPPARLKSVLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCEGHAGNSDSNSDXXXXXXXXXXXXXADECVAPLEAFLRQG----RPEHHDEIAPPIRQKGAQDSGRNASGEQGSSKTAD 804
QEELCLRWILELPPARLK VLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDV GIVRLFGALQSNGFASGIYLHPAMTNHSCR A++ WRAGQSISDTQ+P S+KKG NP+PAGEKGSLLSEIRATELIR GQEITISYLEPREIALASRQARLKDQFGFDCSCVLCEGHA + SNS+ DE APLEAFLRQG RPEH DE+APP QKG + RN SGE G SKTAD
Sbjct: 142 QEELCLRWILELPPARLKRVLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVPGIVRLFGALQSNGFASGIYLHPAMTNHSCRANAIK--WRAGQSISDTQMPHSKKKGVNPNPAGEKGSLLSEIRATELIRMGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCEGHAESRQSNSEAAAAAA-------VDESFAPLEAFLRQGLRQGRPEHQDEVAPPTCQKGVEVCRRNVSGEPGRSKTAD 404
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: A0A6H5L5K6_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K6_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 8.910e-133 Identity = 217/269 (80.67%), Postives = 225/269 (83.64%), Query Frame = 1
Query: 1 QEELCLRWILELPPARLKSVLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGF-WRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCEGHAGNSDSNSDXXXXXXXXXXXXXADECVAPLEAFLRQGRPEHHDEIAPPIRQKGAQDSGRNASGEQGSSKTAD 804
QEELCL+WILELPPARLK VLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKL RESSATEAEAEA+GLDV GIVRLFGALQSNGFASGIYLHPAMTNHSCRR WRAGQSISDTQ+P SRK G NPDPAGEKGSLLSEIRATELIR GQEITISYLEPREIALASRQARLKDQFGF+CSCVLCEGHA + SNS+ E VAPLEAFLRQGRPEH DEIAPP QKG RN SGE G +K+AD
Sbjct: 153 QEELCLQWILELPPARLKRVLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLRRESSATEAEAEAMGLDVPGIVRLFGALQSNGFASGIYLHPAMTNHSCRRQRPNAIKWRAGQSISDTQMPVSRKTGVNPDPAGEKGSLLSEIRATELIRTGQEITISYLEPREIALASRQARLKDQFGFNCSCVLCEGHADHRQSNSEATAASAAVH------ERVAPLEAFLRQGRPEHQDEIAPPTCQKGGAVCRRNTSGEPGRNKSAD 415
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: A0A2P4X264_9STRA (Putative SET-domain transcriptional regulator protein, Zn-binding site n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X264_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 5.750e-14 Identity = 57/175 (32.57%), Postives = 87/175 (49.71%), Query Frame = 1
Query: 58 VLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCE 582
++ L L+P+ L DLPE AA +++ V +L + S L L +++ A+Q N F SG++L+ AM NH C V+ P+ AG +G + SE+R I KG+++TISYL PRE + +R+ L +QFGF+CSC LC+
Sbjct: 142 IMEHLGHLYPEKLSDLPEELLAAGRNKY----GPQVDELCKNFSE-------LALSHDQVLQNVFAMQCNAFDSGVFLYNAMFNHDCNPNCVKF---------------------TPEDAGPEGGV-SEVRVARPIAKGEQLTISYLYPREQSRENRRKNLWEQFGFECSCELCK 283
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: D0P411_PHYIT (SET domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0P411_PHYIT) HSP 1 Score: 81.6 bits (200), Expect = 5.780e-14 Identity = 58/176 (32.95%), Postives = 88/176 (50.00%), Query Frame = 1
Query: 55 SVLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCE 582
+++ L L+P+ L +LPE AA ++ V +L R + TE L L +++ A+Q N F SG++L+ AM NH C V+ P+ AG +G + SE+R I KG+++TISYL PRE + +RQ L +QFGF+C C LC+
Sbjct: 141 NIMEHLGHLYPEKLSELPEELLAAGRKKY----GPQVDELCR--NFTE-----LALSPDQVLQNVFAMQCNAFDSGVFLYNAMFNHDCNPNCVKF---------------------TPEDAGPEGGV-SEVRVARPIAKGEQLTISYLYPREQSRGNRQKNLSEQFGFECCCELCK 283
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: A0A3M6V9K2_9STRA (SET domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9K2_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.950e-13 Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = 1
Query: 58 VLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCE 582
++ L L+P+ + DLPE AA +++ V++L + S L L +++ A+Q N F SG++L+ AM NH C V+ P+ AG +G + SE+R I KG+++TISYL PRE + +RQ L +QFGF C C LC+
Sbjct: 142 IMKHLGHLYPEQVSDLPEELLAAGRQKYDP----QVSELCKNFSE-------LALSHDQVLQNVFAMQCNAFDSGVFLYNAMFNHDCNPNCVKF---------------------TPEDAGPEGGV-SEVRVARPIVKGEQLTISYLYPREQSRENRQKNLWEQFGFVCKCQLCQ 283
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: A0A6A3MPR3_9STRA (SET domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MPR3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.950e-13 Identity = 57/180 (31.67%), Postives = 84/180 (46.67%), Query Frame = 1
Query: 58 VLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEA-----EALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCE 582
++ L L+P+ L +LPE AA GRE + + L L +++ A+Q N F SG++L+ AM NH C V+ P+ AG +G + SE+R I KG+++TISYL PRE + +RQ L +QFGF+CSC LC+
Sbjct: 142 IMDHLGHLYPEKLSELPEQLLAA----------------GREKYGPQVDELCKNFSELALVHDQVLQNVLAMQCNAFDSGVFLYNAMFNHDCNPNCVKFV---------------------PEDAGVEGGV-SEVRVARPIAKGEQLTISYLYPREQSRENRQKNLWEQFGFECSCELCK 283
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: A0A485KVE1_9STRA (Aste57867_12068 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVE1_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.460e-13 Identity = 51/167 (30.54%), Postives = 76/167 (45.51%), Query Frame = 1
Query: 79 LHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLC 579
LHP L+DLP + A + ++AK R DV +++ +Q N F+SG++LH AM NH C V+ + S+S E+RA + I+KG+++ ISYL PRE + RQ +L QFGF+C C +C
Sbjct: 145 LHPVVLEDLPATLLDAARDEYTAPLTALLAKFNRTD------------DVDRWLQVVLGMQCNAFSSGVFLHTAMFNHDCNPNCVKFTPESAMSVS-------------------------EVRAAKAIKKGEQLFISYLYPREQSRERRQKQLTRQFGFECVCPMC 274
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: A0A024U6G3_9STRA (SET domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6G3_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.520e-13 Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 1
Query: 79 LHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLC 579
LHP L+DLP++ A ++++ ++ + GR + + L V + G +Q N F SG++LH AM NH C V+ +G S+S E+RA + I+KG+++ ISY+ PRE + RQA+L QFGF C C +C
Sbjct: 138 LHPVVLEDLPKTLLDAAHEEYDDSLTQLLTQYGRINGTDDDATLRRWLQV-----VLG-MQCNAFTSGVFLHTAMFNHDCNPNCVKFSPESGLSVS-------------------------EVRAAKAIKKGEQLFISYIYPREQSRERRQAQLVRQFGFVCHCPMC 273
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: A0A225WSW6_9STRA (SET-domain transcriptional regulator protein, Zn-binding site n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSW6_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 4.810e-13 Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = 1
Query: 58 VLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCE 582
++ L L+P+ L +LP+ AA ++ V +L + S L L +++ A+Q N F SG++L+ AM NH C V+ P+ AG +G + SE+R I KG+++TISYL PRE + +RQ L +QFGF+CSC LC+
Sbjct: 140 IMEHLGHLYPEKLSELPQELLAAGRDKY----GPQVDELCKNFSD-------LALTHDHVLQNVLAMQCNAFDSGVFLYNAMFNHDCNPNCVKF---------------------TPEDAGPEGGV-SEVRVARPIAKGEQLTISYLYPREQSRENRQKNLWEQFGFECSCELCK 281
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Match: A0A3F2RZL5_9STRA (SET domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RZL5_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 4.920e-13 Identity = 55/175 (31.43%), Postives = 86/175 (49.14%), Query Frame = 1
Query: 58 VLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVHGIVRLFGALQSNGFASGIYLHPAMTNHSCRRVAVEGFWRAGQSISDTQIPGSRKKGENPDPAGEKGSLLSEIRATELIRKGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCE 582
++ L +L+P+ L +LP AA +++ V +L + S L L +++ A+Q N F SG++L AM NH C V+ P+ AG G + SE+R I+KG+++TISYL PRE + +RQ L++QFGF+C C LC+
Sbjct: 65 IMQHLGYLYPEKLSELPGDLLAAGRTKY----GPQVDELCKNFSE-------LTLTHDQVLQNVFAMQCNAFDSGVFLFNAMFNHDCNPNCVKFA---------------------PEDAGPDGGV-SEVRVARPIKKGEQLTISYLYPREKSRENRQKNLREQFGFECKCELCK 206 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12903.2198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12903.2198.1 >prot_E-fasciculatus_F_contig12903.2198.1 ID=prot_E-fasciculatus_F_contig12903.2198.1|Name=mRNA_E-fasciculatus_F_contig12903.2198.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=268bp QEELCLRWILELPPARLKSVLGELRWLHPQSLQDLPESEAAALMSRHEETback to top mRNA from alignment at E-fasciculatus_F_contig12903:5..2687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12903.2198.1 ID=mRNA_E-fasciculatus_F_contig12903.2198.1|Name=mRNA_E-fasciculatus_F_contig12903.2198.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2683bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12903:5..2687- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12903:5..2687- >mRNA_E-fasciculatus_F_contig12903.2198.1 ID=mRNA_E-fasciculatus_F_contig12903.2198.1|Name=mRNA_E-fasciculatus_F_contig12903.2198.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1608bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12903:5..2687- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |