mRNA_E-fasciculatus_F_contig12900.2194.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: D7FR88_ECTSI (Endo-1,3-beta-glucanase, C-terminal, family GH81 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR88_ECTSI) HSP 1 Score: 347 bits (891), Expect = 1.640e-117 Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 1
Query: 1 GDPAKAQTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANRP 531
GDPAK QTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQ MLPITGVSEQLL+PRWVQQMLPSFE+SCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDD FETAGGNGHSR+SMLWFVANRP
Sbjct: 227 GDPAKTQTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQ-----MLPITGVSEQLLDPRWVQQMLPSFEDSCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDVFETAGGNGHSRTSMLWFVANRP 398
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: A0A835YN05_9STRA (Glyco_hydro81C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN05_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.610e-75 Identity = 115/176 (65.34%), Postives = 134/176 (76.14%), Query Frame = 1
Query: 1 GDPAKAQTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANR 528
GD A+A TAS +RDTGR L A E++SAQ+YW V GTP R+YPE Y+ VVGMLWS LAQMQTWFG+EAWKV+GIQ MLPITGVSE+LLE WV+QMLP F+ESC NPI CV +GWSMLV+ QAITG W RDGI+ LPD AFE AGGNGHSRS+MLWF++ +
Sbjct: 201 GDMARANTASHVRDTGRMLSAMEIRSAQVYWHVKAPGTPGSGRIYPEGYKGKVVGMLWSALAQMQTWFGSEAWKVFGIQ-----MLPITGVSERLLEKEWVKQMLPDFKESCWDPINPISMCVEQGWSMLVNVAQAITGEWRLARDGILDLPDSAFEGAGGNGHSRSNMLWFISTQ 371
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: A0A7S2I650_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I650_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.990e-44 Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 1
Query: 16 AQTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANRP 531
A TAS +RD GR L ATE++SAQ YW V + G + +YP+ YRP VVGM+W T+ Q QTWFG+ + YGIQ ++P+T VSE+ +WVQQM P F ESC D N C +GWS+L +A A G + + LP FE+AGGNGHS ++ LW++A RP
Sbjct: 22 ASTASRVRDMGRLLTATEIRSAQRYWHVLH-GDLAINTIYPKVYRPAVVGMMWDTMCQFQTWFGSAPYLAYGIQ-----LMPLTSVSERRDSLKWVQQMYPPFAESCNSDRN----CEEQGWSILQYAMLATVGHRNLAAEKVNKLPSSVFESAGGNGHSLTNTLWYIATRP 183
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: A0A7S1U813_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U813_9STRA) HSP 1 Score: 154 bits (388), Expect = 4.840e-40 Identity = 81/178 (45.51%), Postives = 111/178 (62.36%), Query Frame = 1
Query: 4 DPAKAQTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLP--RVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANRP 531
+P A A IRD GR LL+TE++SA+ YW V G D P +YP Y+P+ VGMLWS +AQ QTWFG+ + VYGIQ M+P T E LLEP W++++LP F+ SC D++P+ C +GW +L QA G G+ +PD A+ T GGNGHSR++ L+++A RP
Sbjct: 758 NPKSATVAQKIRDLGRLLLSTEIRSAKRYWHVVQ-GKFDAPYDSIYPSEYQPYAVGMLWSIMAQFQTWFGSAPFLVYGIQ-----MVPNTPTMELLLEPEWLEELLPDFKTSC--DADPM--CTEQGWKLLYFLAQAAVGNTTAAWAGLDEIPDAAYLTPGGNGHSRANSLYWIATRP 925
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: A0A7S2UBT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBT4_9STRA) HSP 1 Score: 149 bits (375), Expect = 6.300e-40 Identity = 77/171 (45.03%), Postives = 105/171 (61.40%), Query Frame = 1
Query: 16 AQTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANR 528
A+TA+ +RD GR L ATE++SA YW V + P +YP+ Y+P VGM+W T+AQ QTWFG+ A+ YGIQ ++P+T VSE+ W QQM PS+ ESC D N C V+GWS+ A A G + + +LP FE+AGGNGHS ++ LW++A R
Sbjct: 221 AKTATRVRDMGRLLTATEIRSAARYWHVLHGDVNTRP-IYPKIYKPSAVGMMWDTMAQFQTWFGSAAYLAYGIQ-----LIPLTSVSERRDSLNWAQQMYPSYAESCESDPN----CAVQGWSVAQLAMLATVGHPKWAMETAESLPLSVFESAGGNGHSLTNTLWYIATR 381
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: A0A7S2RAD5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RAD5_9STRA) HSP 1 Score: 136 bits (343), Expect = 3.750e-35 Identity = 74/176 (42.05%), Postives = 106/176 (60.23%), Query Frame = 1
Query: 4 DPAKAQTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANRP 531
D K + + +RD GR L +TE++SA YW V P +VYP+ Y V+G+LW+ +AQ QT+FG A YGIQ ++P+T +SE+ WVQ + P+FE+SC +SN C +GWS+L HA A G + + +P DAFE+AGGNGHS ++ LW++A RP
Sbjct: 95 DTEKERASLHVRDVGRLLTSTELRSADRYWHV-RLDDPSR-QVYPKEYNEPVIGILWNCMAQFQTFFGGAAHLAYGIQ-----LIPLTPISEKRDNYTWVQTLYPNFEKSCETNSN----CDAQGWSVLGHAILATIGHKDLALKKALTVPSDAFESAGGNGHSLTNTLWYIATRP 259
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: K0TPN5_THAOC (Glyco_hydro81C domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPN5_THAOC) HSP 1 Score: 139 bits (350), Expect = 6.480e-35 Identity = 70/164 (42.68%), Postives = 104/164 (63.41%), Query Frame = 1
Query: 40 DTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANRP 531
+ GR L ATE+++A YW V + P VYP++Y+P VVGM+W T+ Q QTWFG + + YGIQ +LP+T VSE+ +W++Q+ PSF SC D C EGW++L++A A G + + ++LP+ AF +AGGNGHS ++ LW++A+RP
Sbjct: 783 NVGRLLAATEIRAADRYWHVYS---PKRDAVYPDSYQPRVVGMMWDTMCQFQTWFGNQPYLAYGIQ-----LLPLTPVSERRDTDQWLRQLYPSFAASCSSDER----CREEGWAVLLYAVLAELGHADMALNLTLSLPESAFTSAGGNGHSLTNTLWYIASRP 934
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: A0A7S4MH26_9STRA (Hypothetical protein (Fragment) n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MH26_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.300e-34 Identity = 75/202 (37.13%), Postives = 114/202 (56.44%), Query Frame = 1
Query: 1 GDPAKAQTASLIRDTGRQLLATEVQSAQIYWQVA------------NAGTPD-------LP------RVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANRP 531
GD + A+ +RD GR L ATE++S+ YW V +AGT + LP +YPE Y V+G++W+T+AQ QTWFG + + YGIQ +LP+T +SE+ + +W + M P+F SC + C +GWS+L A A GR D + +++P ++FE+AGGNGHS +++LW++A RP
Sbjct: 400 GDASLIARAAHVRDAGRLLAATELRSSDRYWHVRLQGEEEDAGGDDDAGTKNGESPSSLLPVPVPPASLYPEEYDERVIGVMWNTMAQFQTWFGNDPFLAYGIQ-----LLPLTAISEERDDLKWTKSMYPAFASSCEESA----VCTEQGWSILQLAVLATVGRRSDASERALSVPPESFESAGGNGHSLTNLLWYIATRP 592
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: A0A7S4I8S0_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I8S0_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.070e-34 Identity = 75/202 (37.13%), Postives = 114/202 (56.44%), Query Frame = 1
Query: 1 GDPAKAQTASLIRDTGRQLLATEVQSAQIYWQVA------------NAGTPD-------LP------RVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANRP 531
GD + A+ +RD GR L ATE++S+ YW V +AGT + LP +YPE Y V+G++W+T+AQ QTWFG + + YGIQ +LP+T +SE+ + +W + M P+F SC + C +GWS+L A A GR D + +++P ++FE+AGGNGHS +++LW++A RP
Sbjct: 625 GDASLIARAAHVRDAGRLLAATELRSSDRYWHVRLQGEEEDAGGDDDAGTKNGESPSSLLPVPVPPASLYPEEYDERVIGVMWNTMAQFQTWFGNDPFLAYGIQ-----LLPLTAISEERDDLKWTKSMYPAFASSCEESA----VCTEQGWSILQLAVLATVGRRSDASERALSVPPESFESAGGNGHSLTNLLWYIATRP 817
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Match: A0A7S1YNF3_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YNF3_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.240e-33 Identity = 71/162 (43.83%), Postives = 94/162 (58.02%), Query Frame = 1
Query: 46 GRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRPHVVGMLWSTLAQMQTWFGAEAWKVYGIQASYLSMLPITGVSEQLLEPRWVQQMLPSFEESCLYDSNPIKACVVEGWSMLVHAGQAITGRWEDGRDGIMALPDDAFETAGGNGHSRSSMLWFVANRP 531
GR + ATE++S YW V ++YP+ Y+ + VG+LW+T+AQ QTWFG + YGIQ +LPIT SE +P WV++M F ++C DSN C GWSML A A G + + L D FETAGGNGHSRS+ LW++A RP
Sbjct: 1 GRVMTATEIRSTDRYWHVRQHDKSK--KIYPDMYKENSVGILWNTMAQFQTWFGNAPYLPYGIQ-----LLPITPASEFRDQPDWVREMYRPFADACNDDSN----CEDGGWSMLKLAMMASAGHRVEAAARLKNLTSDVFETAGGNGHSRSNTLWYIATRP 151 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12900.2194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12900.2194.1 >prot_E-fasciculatus_F_contig12900.2194.1 ID=prot_E-fasciculatus_F_contig12900.2194.1|Name=mRNA_E-fasciculatus_F_contig12900.2194.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=177bp GDPAKAQTASLIRDTGRQLLATEVQSAQIYWQVANAGTPDLPRVYPEAYRback to top mRNA from alignment at E-fasciculatus_F_contig12900:922..2650- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12900.2194.1 ID=mRNA_E-fasciculatus_F_contig12900.2194.1|Name=mRNA_E-fasciculatus_F_contig12900.2194.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1729bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12900:922..2650- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12900:922..2650- >mRNA_E-fasciculatus_F_contig12900.2194.1 ID=mRNA_E-fasciculatus_F_contig12900.2194.1|Name=mRNA_E-fasciculatus_F_contig12900.2194.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1062bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12900:922..2650- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |