mRNA_E-fasciculatus_F_contig12869.2161.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: D8LGT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT9_ECTSI) HSP 1 Score: 277 bits (708), Expect = 2.130e-89 Identity = 162/204 (79.41%), Postives = 165/204 (80.88%), Query Frame = 1
Query: 1 APVSTPTSPKAASAADENCDAGGSNDDSNDGSSSNLDLTSSDTVAYSSRMIAASRALESRRRDRLFGDPYAELLAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALLTQAAAVDEVAAAVAG 612
APVS A SAADENCDAG SSNLDLTSSDTVAYSSRMIAA+RALESRRRDRLF DPYAELLAGPDAMQT ED+ AQEE S PPLEAT AAASDGVPRD QRRLAIRTRFCDDFFEDC GPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVK ALLTQAAA DEVAAA+AG
Sbjct: 37 APVSPXXXXXAESAADENCDAGXXXXXXXXXXSSNLDLTSSDTVAYSSRMIAAARALESRRRDRLFDDPYAELLAGPDAMQTVEDK----AQEESSLPPLEAT-----AAATAAAASDGVPRDVQRRLAIRTRFCDDFFEDCAGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKGALLTQAAAADEVAAALAG 231
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: D7FXP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP3_ECTSI) HSP 1 Score: 201 bits (510), Expect = 1.360e-60 Identity = 109/131 (83.21%), Postives = 113/131 (86.26%), Query Frame = 1
Query: 220 LAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALLTQAAAVDEVAAAVAG 612
LAGPD +QT EDREK +AQEELSAPPLEAT AAASDGVPRD Q RLAIRTRFCDDFFEDC GPRGIKQIVSLGAGMDTRGLR RASGDTKVFEVDQALVLRVK+ALLTQAAA DEVAAA+AG
Sbjct: 11 LAGPDPIQTVEDREKVKAQEELSAPPLEAT-----TAATAAAASDGVPRDVQTRLAIRTRFCDDFFEDCAGPRGIKQIVSLGAGMDTRGLRRRASGDTKVFEVDQALVLRVKSALLTQAAAADEVAAALAG 136
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: UPI00184D101A (SAM-dependent methyltransferase n=2 Tax=Streptomyces sp. TaxID=1931 RepID=UPI00184D101A) HSP 1 Score: 92.0 bits (227), Expect = 7.230e-19 Identity = 65/151 (43.05%), Postives = 79/151 (52.32%), Query Frame = 1
Query: 130 VAYSSRMIAASRALESRRRDRLFGDPYAELLAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALLTQAAA 582
VA ++R AA+RA ESRR DRLF DP +ELLAG D Q + ARA +E G P L IRTR+ DDF T G++QIV +GAG+DTR RL DT+VFEVDQ VL K +L +A A
Sbjct: 27 VAQTARWTAAARARESRRPDRLFDDPLSELLAGEDGEQLLKYFHTARASDE------------------------GNPF-----LPIRTRWFDDFLARSTAD-GVRQIVGIGAGLDTRSFRLSWPEDTRVFEVDQQPVLTYKDKVLAEAGA 147
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: D7FXP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP1_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 1.960e-16 Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 1
Query: 472 MDTRGLRLRASGDTKVFEVDQALVLRVKTALLTQAAAVDEVAAAVAG 612
MDTRGLRLR SGDTKVFEVDQALVLRVK+ALLTQAAA DEVAAAVAG
Sbjct: 1 MDTRGLRLRVSGDTKVFEVDQALVLRVKSALLTQAAAADEVAAAVAG 47
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: UPI0018821DFE (SAM-dependent methyltransferase n=1 Tax=Tychonema sp. LEGE 07203 TaxID=1828671 RepID=UPI0018821DFE) HSP 1 Score: 82.8 bits (203), Expect = 1.290e-15 Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 130 VAYSSRMIAASRALESRRRDRLFGDPYAELLAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALL 567
V++++R++AASRA ES+R +RLF DP++E LAG +AM EL P +E + ++G P +A+RTRF DDF + I+Q+V LGAGMDTR RL +T +E+D+A VL K +L
Sbjct: 9 VSFTARLMAASRAFESKRTNRLFNDPFSEQLAGIEAM-------------ELMLPKVEEYE------------ANGRPY-----VAVRTRFFDDFLMQYS--HTIRQVVLLGAGMDTRAYRLDLHPETHYYEIDRASVLDYKENIL 122
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: A0A352XFW5_9CYAN (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Cyanobacteria bacterium UBA11367 TaxID=2055774 RepID=A0A352XFW5_9CYAN) HSP 1 Score: 82.4 bits (202), Expect = 2.140e-15 Identity = 57/157 (36.31%), Postives = 79/157 (50.32%), Query Frame = 1
Query: 103 NLDLTSSDTVAYSSRMIAASRALESRRRDRLFGDPYAELLAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALLTQ 573
N T + V+ S++++AA RA E+ R DRLF DP+A LAG A++ A++RE+ D V RLAIRTRF DDF D ++Q+V L AGMD R RL T ++E+D+A VL K A+L +
Sbjct: 12 NQSFTIENFVSLSAQLVAAVRARETARNDRLFTDPFAAELAGKQALEMAKEREER--------------------------TKDSVAD----RLAIRTRFFDDFLIDAVSE--VRQVVILAAGMDARAFRLPWPDGTIIYELDKAEVLAKKEAILKE 136
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: UPI0019B7C6B2 (SAM-dependent methyltransferase n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI0019B7C6B2) HSP 1 Score: 82.8 bits (203), Expect = 2.810e-15 Identity = 56/150 (37.33%), Postives = 73/150 (48.67%), Query Frame = 1
Query: 124 DTVAYSSRMIAASRALESRRRDRLFGDPYAELLAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALLTQ 573
D V +++ +AA+RA+ES+R DRLF DPYA LAG D AR + L D LA+RT + DD G GI+Q+V L AGMDTR RL T V+E+D+ VL VK A+LT+
Sbjct: 63 DPVGQTAQWVAAARAVESQRPDRLFDDPYAVALAGQDG---------ARCLQVLGVSGKPIVDY----------------------LAMRTWYLDDLIASAVGDTGIRQVVILAAGMDTRAFRLPWPEGTHVYELDRPAVLAVKDAILTK 181
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: UPI0020216C42 (SAM-dependent methyltransferase n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI0020216C42) HSP 1 Score: 81.3 bits (199), Expect = 4.720e-15 Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 1
Query: 130 VAYSSRMIAASRALESRRRDRLFGDPYAELLAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALL 567
V+++++++AA+RA+E++R D LF DP+AE LAG DA+Q A P LE + G P + +RTRF DDF +C+ ++Q+V LGAGMDTR RL T ++E+D + VL K ++L
Sbjct: 9 VSFTAKVMAAARAIETQRPDALFIDPFAEQLAGADAIQAA-------------IPRLEEYEKR------------GRPFSS-----VRTRFFDDFLMNCS--HDVRQVVLLGAGMDTRAFRLNWKAGTHIYEIDHSDVLHYKESVL 122
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: A0A2K8T761_9NOSO (S-adenosyl-L-methionine-dependent methyltransferase n=4 Tax=Nostoc TaxID=1177 RepID=A0A2K8T761_9NOSO) HSP 1 Score: 80.9 bits (198), Expect = 7.920e-15 Identity = 56/157 (35.67%), Postives = 74/157 (47.13%), Query Frame = 1
Query: 97 SSNLDLTSSDTVAYSSRMIAASRALESRRRDRLFGDPYAELLAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALL 567
S N L+ D V S+ ++AA RA+E++R DRLF DP+A L P+A A A + D + LA+RTRF DDF + Q+VSLGAGMDTR RL + TK +E+D VL K A+L
Sbjct: 4 SGNKKLSQKDFVLLSAPLMAAYRAIENQRNDRLFSDPFAAKLVTPEA---------------------------------EAIALEDPEEDGRAYLAVRTRFFDDFL--LSFAHVAPQVVSLGAGMDTRAFRLNWTEGTKYYEIDYPEVLNYKDAIL 125
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Match: A0A2T0NC07_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=3 Tax=Actinomycetia TaxID=1760 RepID=A0A2T0NC07_9ACTN) HSP 1 Score: 80.5 bits (197), Expect = 1.060e-14 Identity = 60/154 (38.96%), Postives = 75/154 (48.70%), Query Frame = 1
Query: 130 VAYSSRMIAASRALESRRRDRLFGDPYAELLAGPDAMQTAEDREKARAQEELSAPPLEATDXXXXXXXXXAAASDGVPRDAQRRLAIRTRFCDDFFEDCTGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKTALLTQAAAVDE 591
V ++R AA+RA ES R DRLF DPYA LLAGP+ + +RA +E G P L IRTR+ DD G+ Q+V LGAG+DTR RL T V+EVDQ VL K A+L +A AV +
Sbjct: 9 VGETARWTAAARARESARPDRLFDDPYASLLAGPEGAELLRHFHTSRASDE------------------------GNPF-----LPIRTRWFDDTIGKGLAA-GLVQVVGLGAGLDTRAYRLAWPVGTTVYEVDQPTVLSYKLAVLDKAGAVPQ 132 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12869.2161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12869.2161.1 >prot_E-fasciculatus_F_contig12869.2161.1 ID=prot_E-fasciculatus_F_contig12869.2161.1|Name=mRNA_E-fasciculatus_F_contig12869.2161.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=204bp APVSTPTSPKAASAADENCDAGGSNDDSNDGSSSNLDLTSSDTVAYSSRMback to top mRNA from alignment at E-fasciculatus_F_contig12869:3..3191- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12869.2161.1 ID=mRNA_E-fasciculatus_F_contig12869.2161.1|Name=mRNA_E-fasciculatus_F_contig12869.2161.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3189bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12869:3..3191- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12869:3..3191- >mRNA_E-fasciculatus_F_contig12869.2161.1 ID=mRNA_E-fasciculatus_F_contig12869.2161.1|Name=mRNA_E-fasciculatus_F_contig12869.2161.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1224bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12869:3..3191- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |