mRNA_E-fasciculatus_F_contig12859.2155.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12859.2155.1
Unique NamemRNA_E-fasciculatus_F_contig12859.2155.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: D7FZE7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE7_ECTSI)

HSP 1 Score: 610 bits (1572), Expect = 7.140e-211
Identity = 355/376 (94.41%), Postives = 357/376 (94.95%), Query Frame = 1 
Query:    1 FLCDYIAERFSRENSLSEAGLWATLLTDVLVTARERAYGSIADQSVDRLCALASRLDLAVREDVFNDGTVRDVQRLFRLATGIGEGQHEPGMAERREAKQEXXXXKDGSTKIQKTLKTAWSLVSKMDKNKWFKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTYNAEALRQEEEWSKISAKIENDLRHQETRPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------ALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEACCERGILPRDHPVYAPLLQLLDLGESARHMLRANTFGVREVKAGVTRAALPCVVALHARAA 1110
            FLCDYIAERFS+ENSLSEAGLWATLLTDVLVTARE AYGSIADQSVDRLCALASRLDLAVREDVFNDGTVRDVQRLFRLATGIGEGQHEPGM ERREAKQE    KDGSTKIQKTLKTAWSLVSKMDKNKWFKDPVTEAIA GYHKVIKTPMDL TILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGT YN EALRQEEEWSKISAKIENDLRHQETRPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       ALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPE CCERGILPRDHPVYAPL+QLLDLGESARHMLRANTFGVREVKAGVTRA LPCVVALHARAA
Sbjct:  130 FLCDYIAERFSQENSLSEAGLWATLLTDVLVTAREHAYGSIADQSVDRLCALASRLDLAVREDVFNDGTVRDVQRLFRLATGIGEGQHEPGMVERREAKQEEAKQKDGSTKIQKTLKTAWSLVSKMDKNKWFKDPVTEAIAEGYHKVIKTPMDLGTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTQYNKEALRQEEEWSKISAKIENDLRHQETRPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEVCCERGILPRDHPVYAPLVQLLDLGESARHMLRANTFGVREVKAGVTRAVLPCVVALHARAA 505
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: A0A6H5KMY2_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY2_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 2.930e-124
Identity = 234/251 (93.23%), Postives = 236/251 (94.02%), Query Frame = 1 
Query:  376 MDKNKWFKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTYNAEALRQEEEWSKISAKIENDLRHQETRPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------ALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEACCERGILPRDHPVYAPLLQLLDLGESARHMLRANTFGVREVKAGVTRAALPCVVALHARAA 1110
            MDKNKWFKDPVTEAIA GYHKV+KTPMDL TILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGT YN EALRQEEEWSKISAKIENDLRHQE RP GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       ALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEACCERGILPRDHPVYAPL+QLLDLGESARHMLRANTFGVREVKA VTRA LPCVVALHARAA
Sbjct:    1 MDKNKWFKDPVTEAIAEGYHKVVKTPMDLGTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTQYNKEALRQEEEWSKISAKIENDLRHQEARPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEACCERGILPRDHPVYAPLVQLLDLGESARHMLRANTFGVREVKAEVTRAVLPCVVALHARAA 251
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: A0A7S1EQ24_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ24_9RHOD)

HSP 1 Score: 78.2 bits (191), Expect = 1.540e-12
Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 1 
Query:  358 WSLVSKMDKNKWFKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTYNAEALRQEEEWSKISAKIENDLRHQET 660
            W  VS+ D    F +PV   I   Y +VIK PMDLSTI KKI+GG Y S  DF  DL+LMW NC T+N   + +   A++      K+  +   ++R   T
Sbjct:   49 WDEVSRKDAKNIFAEPVPVDIIPEYAEVIKFPMDLSTIRKKIEGGKYNSLSDFADDLELMWSNCETFNEPDSVFTKTAVKLRHASKKLLDRATKEIRDART 149
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: UPI0011EA1C39 (cat eye syndrome critical region protein 2 n=1 Tax=Archocentrus centrarchus TaxID=63155 RepID=UPI0011EA1C39)

HSP 1 Score: 74.7 bits (182), Expect = 6.600e-11
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 1 
Query:  373 KMDKNKW-FKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTY 579
            K  K+ W F +PV E+ A  YH++I+TPMDLSTI KK+  G Y +  DF  D+KLM++NC  YNGE + Y
Sbjct:  422 KAHKDSWPFLEPVDESYAPNYHEIIQTPMDLSTIEKKLNNGEYVAKEDFVADVKLMFENCVEYNGEDSEY 491
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: A0A8C9R9N9_SCLFO (Bromo domain-containing protein n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9R9N9_SCLFO)

HSP 1 Score: 75.1 bits (183), Expect = 7.700e-11
Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 1 
Query:  319 DGSTKIQKTLKTAWSLVSKMDKNKW-FKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTYN--AEALR 597
            D  T + K L+T      K  K+ W F +PV E+ A  YH++I+TPMDLSTI KK+  G Y +  +F  D+KL+++NC+ YNGE + Y   AE+L+
Sbjct:  407 DDYTALYKVLETL-----KAHKDSWPFVEPVDESYAPNYHEIIQTPMDLSTIEKKLNKGEYMTKDEFVSDMKLIFENCQEYNGEDSEYTMMAESLK 497
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: UPI00186494FD (cat eye syndrome critical region protein 2 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186494FD)

HSP 1 Score: 74.7 bits (182), Expect = 1.030e-10
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 1 
Query:  373 KMDKNKW-FKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTYNAEALRQEEEWSKISAK 630
            K  K+ W F +PV E+ A  YH++I+TPMDLSTI KK+  G Y +  +F  D+KLM++NC+ YNGE + Y   A   E  +SK   K
Sbjct:  419 KAHKDAWPFMEPVDESYAPNYHEIIQTPMDLSTIEKKLNEGEYIAKDEFVADVKLMFENCQEYNGEDSEYTMMAESLERCFSKALLK 505
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: A0A452ELZ1_CAPHI (CECR2 histone acetyl-lysine reader n=2 Tax=Capra hircus TaxID=9925 RepID=A0A452ELZ1_CAPHI)

HSP 1 Score: 74.7 bits (182), Expect = 1.030e-10
Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 1 
Query:  367 VSKMDKNKW-FKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTY 579
            V K  K+ W F +PV E+ A  Y+++IK PMD+S++ KK+ GG Y +  +F  D+K M++NCR YNGEG+ Y
Sbjct:  402 VVKAHKDSWPFLEPVDESYAPNYYQIIKVPMDISSMEKKLNGGSYCTKEEFVNDMKTMFRNCRKYNGEGSEY 473
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: A0A3Q0RT82_AMPCI (Bromo domain-containing protein n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0RT82_AMPCI)

HSP 1 Score: 74.7 bits (182), Expect = 1.040e-10
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 1 
Query:  373 KMDKNKW-FKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTY 579
            K  K+ W F +PV E+ A  YH++I+TPMDLSTI KK+  G Y +  DF  D+KLM++NC  YNGE + Y
Sbjct:  384 KAHKDSWPFLEPVDESYAPNYHEIIQTPMDLSTIEKKLNNGEYVAKEDFVADVKLMFENCVEYNGEDSEY 453
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: A0A1A7WYF6_9TELE (Cat eye syndrome chromosome region, candidate 2 (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7WYF6_9TELE)

HSP 1 Score: 73.2 bits (178), Expect = 1.110e-10
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1 
Query:  373 KMDKNKW-FKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTY 579
            K+ K+ W F +PV ++ A  YH++I+TPMDLSTI KK+  G Y +  +F  D+KLM++NC  YNGE + Y
Sbjct:   54 KVHKDAWPFLEPVDDSYAPNYHEIIQTPMDLSTIEKKLNDGDYVAKEEFVADVKLMFENCMEYNGEDSEY 123
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Match: A0A3B3TE44_9TELE (Cat eye syndrome critical region protein 2-like n=7 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3TE44_9TELE)

HSP 1 Score: 74.3 bits (181), Expect = 1.340e-10
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 1 
Query:  319 DGSTKIQKTLKTAWSLVSKMDKNKW-FKDPVTEAIAVGYHKVIKTPMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTYNAEA 591
            D  T + K L+T      K  K+ W F +PV E+ A  YH++I+TPMDLSTI KK+  G Y +  +F  D++L+++NC+ YNGE + Y A A
Sbjct:  397 DDYTALYKVLETI-----KAHKDSWPFLEPVDESFAPHYHEIIQTPMDLSTIEKKLNDGEYVAKEEFVSDVRLIFENCQEYNGEDSEYTAMA 483
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12859.2155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZE7_ECTSI7.140e-21194.41Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KMY2_9PHAE2.930e-12493.23Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S1EQ24_9RHOD1.540e-1240.59Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
UPI0011EA1C396.600e-1151.43cat eye syndrome critical region protein 2 n=1 Tax... [more]
A0A8C9R9N9_SCLFO7.700e-1143.75Bromo domain-containing protein n=3 Tax=Scleropage... [more]
UPI00186494FD1.030e-1045.98cat eye syndrome critical region protein 2 n=1 Tax... [more]
A0A452ELZ1_CAPHI1.030e-1047.22CECR2 histone acetyl-lysine reader n=2 Tax=Capra h... [more]
A0A3Q0RT82_AMPCI1.040e-1051.43Bromo domain-containing protein n=1 Tax=Amphilophu... [more]
A0A1A7WYF6_9TELE1.110e-1048.57Cat eye syndrome chromosome region, candidate 2 (F... [more]
A0A3B3TE44_9TELE1.340e-1043.48Cat eye syndrome critical region protein 2-like n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12859contigE-fasciculatus_F_contig12859:194..3856 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score614.8
Seed ortholog evalue2.8e-173
Seed eggNOG ortholog2880.D7FZE7
Preferred nameBPTF
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5076@1,KOG1472@2759
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1152
Cds size1152
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12859.2155.1prot_E-fasciculatus_F_contig12859.2155.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12859 194..3856 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927789.4249024-CDS-E-fasciculatus_F_contig12859:193..4171622927789.4249024-CDS-E-fasciculatus_F_contig12859:193..417Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 194..417 +
1695995695.3416228-CDS-E-fasciculatus_F_contig12859:193..4171695995695.3416228-CDS-E-fasciculatus_F_contig12859:193..417Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 194..417 +
1622927789.435364-CDS-E-fasciculatus_F_contig12859:1124..12421622927789.435364-CDS-E-fasciculatus_F_contig12859:1124..1242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 1125..1242 +
1695995695.363688-CDS-E-fasciculatus_F_contig12859:1124..12421695995695.363688-CDS-E-fasciculatus_F_contig12859:1124..1242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 1125..1242 +
1622927789.4463024-CDS-E-fasciculatus_F_contig12859:1900..20381622927789.4463024-CDS-E-fasciculatus_F_contig12859:1900..2038Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 1901..2038 +
1695995695.3731384-CDS-E-fasciculatus_F_contig12859:1900..20381695995695.3731384-CDS-E-fasciculatus_F_contig12859:1900..2038Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 1901..2038 +
1622927789.4598923-CDS-E-fasciculatus_F_contig12859:2368..24551622927789.4598923-CDS-E-fasciculatus_F_contig12859:2368..2455Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 2369..2455 +
1695995695.381501-CDS-E-fasciculatus_F_contig12859:2368..24551695995695.381501-CDS-E-fasciculatus_F_contig12859:2368..2455Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 2369..2455 +
1622927789.469463-CDS-E-fasciculatus_F_contig12859:2914..30041622927789.469463-CDS-E-fasciculatus_F_contig12859:2914..3004Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 2915..3004 +
1695995695.3897784-CDS-E-fasciculatus_F_contig12859:2914..30041695995695.3897784-CDS-E-fasciculatus_F_contig12859:2914..3004Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 2915..3004 +
1622927789.4777126-CDS-E-fasciculatus_F_contig12859:3361..38561622927789.4777126-CDS-E-fasciculatus_F_contig12859:3361..3856Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 3362..3856 +
1695995695.398318-CDS-E-fasciculatus_F_contig12859:3361..38561695995695.398318-CDS-E-fasciculatus_F_contig12859:3361..3856Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12859 3362..3856 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12859.2155.1

>prot_E-fasciculatus_F_contig12859.2155.1 ID=prot_E-fasciculatus_F_contig12859.2155.1|Name=mRNA_E-fasciculatus_F_contig12859.2155.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=384bp
FLCDYIAERFSRENSLSEAGLWATLLTDVLVTARERAYGSIADQSVDRLC
ALASRLDLAVREDVFNDGTVRDVQRLFRLATGIGEGQHEPGMAERREAKQ
EEAKQKDGSTKIQKTLKTAWSLVSKMDKNKWFKDPVTEAIAVGYHKVIKT
PMDLSTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTTYNAEALRQ
EEEWSKISAKIENDLRHQETRPGGGGTAAAATPTNSNKRKSSSGSGSALS
QDDARGSGGGGAALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYR
HASERIPEACCERGILPRDHPVYAPLLQLLDLGESARHMLRANTFGVREV
KAGVTRAALPCVVALHARAAAAGRRRAGGGPDDA
back to top

mRNA from alignment at E-fasciculatus_F_contig12859:194..3856+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12859.2155.1 ID=mRNA_E-fasciculatus_F_contig12859.2155.1|Name=mRNA_E-fasciculatus_F_contig12859.2155.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3663bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12859:194..3856+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTCCTGTGTGACTACATCGCCGAAAGGTTCTCGCGGGAAAATTCTCTGTC
GGAGGCCGGGCTGTGGGCCACGCTCCTGACCGACGTCCTCGTCACGGCGA
GGGAGCGCGCGTACGGCAGCATCGCGGACCAGTCCGTGGACCGGCTCTGC
GCCCTGGCGTCTCGCCTCGACCTGGCCGTGCGAGAGGACGTGTTCAACGA
CGGGACGGTCAGGGATGTGCAACGGTGCGTTTGGCGGTGTGCGAAACGTT
GCGTGGTGTTCTTTGCCGTGTAGTGACGGCGCGTTGATTGCGTTGCTCAT
GTACAATAGTCTACAAGAGCAATTTGTCGTTATATGGGTGCTTCTCTTGT
GTGTAGTACGCGAACGCTTGCGCGTGTTTGGATTTGCGTGTCTTGCCGCG
ATTGTTTGGGGTGGTTGCCGTTGACGTGGGTGTGACGGGAGGCGTTTTTT
GTCTGTTCCGGCGGTTATTCTTCCCGAGTGTTTTTGTGTTTCGGCTAAAG
TCAAGTCCGCACAATATAACGATGGAATTGATCGGCCGGCAAGGGACTGG
TTCACCGATCGATCACACTGTGGATCCCTCCTCCACCACACCCGCAGCCT
GCTTCGCTCGCTAGCCGTCCCTGACTGCAACGTCAACGGACACCTACAAC
CCCAAACCCTCTCCCAAGGCATGTCTCATAACATCGAAACGCACACGCAG
GTTATTGATTTTTTAATCGAACCGATTGCTGTGTTACACTTTTGGGTGTA
GTTGGCCTATGACAACGAAAGGCGTCCGCGTGAGTTGGATACGTTACGGG
TAGTAGACGGTGCTGAGCAGGAAACCGGAACGGTTTTCATTGTGACGAGA
ACAACGGTAGCATCCGTGGCATCCACTCCGACGACGACTTCATCCCTAAC
CTGCGACGGGTCGTTTCCTCAAAACCCGCAGCCTGTTTCGCTTGGCGACC
GGGATCGGGGAAGGCCAGCACGAGCCGGGCATGGCGGAGAGGCGAGAGGC
CAAGCAGGAGGAGGCCAAGCAAAAGGACGGCAGCACTAAGATCCAAAAGG
TTTAACACTTGACTTGGGATATACACGTGCAGTGGACGAGGAGGTGCCTG
CATCTAGTAACAGCTACCACATAGGACGTAAATCTTGTGATCGTGCGCGT
AACTTTTCGCCTGTCCGCGTGGTTGTTGGTTGGTTGTGGCATATAGGAAG
CATAGATGCACGGGATGTGTGTCTTTGGTCTTGTCTGCTTGCGTCGATAC
CCTCCCCGTTTTTCGTTTTTTAATGACGTTCCCGATACATGCACGCACTC
CCTTCCGAGACGGAATGTGGACTCGAAAAGAGGACGAGTCCAGCATTGGC
GGCGAACGAAGACACGTTTTACCTGAAACGCGAGCGTTTGTTAGTAGACG
GGACGTTCTTTGTTGGGTCGGCCGCGTATGGCATTACGGGGACGATGCTT
TCCTTGTGCAAGGTTAGAGATCCAATGTCAGGATGGTCGAGACCCTGAGT
TACATGCACCTACAAGTGCGACGTGTTGCTGTCATCGTTCTTGTTTCAGG
TGCCCCCCCACCCCCTCCGGCTCCGTCCTCTCGAGGACGCGTGGTTCATG
GTCTAACCTCTAAAGGCATGCCAAACATGAGAGTACGCCCCCCCTCCCGC
TCTGCCCGCCGTCCGTTCCCACCTTCGCTTGCTTGCTTGCCGTCTTGTTC
CTCGTAGACGTTGAAGACGGCGTGGTCTCTGGTGTCCAAGATGGACAAGA
ACAAGTGGTTCAAGGACCCCGTCACCGAAGCGATCGCCGTGGGGTACCAC
AAGGTCATCAAGACTCCCATGGATCTGAGCACGATCCTGAAAAAGGTATG
TGTGCTACAGCAGTGGCGAACCACCCTGGTGCGGTGTATAGCCGAGGGGT
AGTGCTCCCCCCAGTAAAGGTACACCGCCGACTGCGGTGGCCGAGGCGCG
CTTGCTGATGTGTAACTTGACGTACCTTCGCCCCCTGCCTCTTGTTCCTG
CCTCTTGTTGCGTTGCATTTTGTTTTCTTCTGGAGGCGACAAGTATTCAT
CAATTGACTTGGTACTGCTGTACCGTCATTTATTTGGTTGTGTTTCGATC
GTTTTCAAGCCATTTTCTTGTCGTTGACCTCTTCCTCTGCCGCGTGCTCC
CCAACCCCGCCACCCTTCGCCGCAGATCAAGGGCGGCGGGTACCCCAGCT
TCGGAGACTTCGACCGAGACTTGAAGCTCATGTGGCAGAATTGCCGCACC
TACAACGGGGAGGTGCGTTGCCTCCACTCCACGCACAAGCAGCAGTCAGT
CACTTTCAGAAATCCAAGACATGGTCTACGACATGAACTGTCGTAGCCTC
CTAGGGTTCGCCCGTCCCGGCGAAACCGTCTCTTCGTGTAGTAACCCGCG
GAGTCATTTTAACTATGGAGTACAATGGAGGAACAGAGGTCAAAAGACGC
CCACGACGAGATCCCTCATCGGCTGTTGCGTTGGTGTTGGGGCGGAAACC
CGTGGGCGCGCTTTACATTACCCCCCCCCACACACCGCCATGACCCACCG
CCCCCCGGGCGTACGAGCTGAAGTTAGCTTCGCTGTGTGTGCCGAACTGC
AAAAATGTTCGTCCATTTTCTGTCGTCCTCCTTTGTATGTGTTACACTTT
CGTTGGGTTGATACGCTTCCGTTCTTTGTCGAGAAACGGACCAACTCTCG
TCATTTCGACATTCGTTACAGGGGACGACATACAACGCCGAAGCCTTGAG
ACAGGAGGAAGAGTGGTCCAAGATTTCCGCGAAGATAGAGAACGACCTAC
GACACCAGGAGGTACGAACGCTTTCGCCGAACCTGTGATGAATCTGTTTT
TTTGCTTGTGTTTTCGGCCTCTCCCTGGAGGTCGGTCCTGCCGCCCCAGG
GGTCCACGACCGGCAGTTGCTAATGCCGCTGTTGCAATCTTGGTTCCGGA
AGTGGGTATGGTGGTGTTGGCGACGGCATTGGTGTTGGTAGTGTATATCG
TACCTGCCGTGGCCTATCTCCGGCCGCCGCCGCCGCCGGGAAACGCATTC
GCGACAGCAACTCATCCCCGCCAAAAGAAATCACCTATTCGTACCCGTCA
CACACACACCCCCCCCTCTCGTGCGCCTACCGTGATCACCCCCCTCAATC
TAATTGTCACCTCTCAAGACTCGCCCCGGCGGCGGAGGCACCGCCGCCGC
CGCCACACCCACCAACAGCAACAAGCGGAAGAGCAGTAGCGGTAGCGGCA
GTGCTCTGTCCCAGGACGATGCCCGAGGAAGCGGCGGGGGCGGCGCGGCA
TTAGCCCCGATGGCCCAGGCGACCCAGCTGGAGAGGGACGGGATCGGCCG
TCGCGTGGGGCTCGCCTCCGTGCTCCTCGCCGAGCCATTCGCGGCAAAGC
TCATGTACCGGCACGCGTCGGAGAGGATCCCGGAGGCGTGCTGCGAGCGG
GGCATCCTCCCGCGCGACCACCCGGTCTACGCGCCGCTGCTGCAGCTCCT
GGACCTGGGGGAGAGCGCCCGCCACATGCTCAGAGCAAACACCTTCGGCG
TGCGCGAGGTTAAGGCCGGGGTGACGAGGGCCGCGCTGCCGTGCGTCGTG
GCGCTGCACGCGCGGGCGGCGGCGGCGGGCCGGCGGCGGGCGGGCGGGGG
TCCCGACGACGCC
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12859:194..3856+

>mRNA_E-fasciculatus_F_contig12859.2155.1 ID=mRNA_E-fasciculatus_F_contig12859.2155.1|Name=mRNA_E-fasciculatus_F_contig12859.2155.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2304bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12859:194..3856+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTCCTGTGTGACTACATCGCCGAAAGGTTCTCGCGGGAAAATTCTCTGTC
GGAGGCCGGGCTGTGGGCCACGCTCCTGACCGACGTCCTCGTCACGGCGA
GGGAGCGCGCGTACGGCAGCATCGCGGACCAGTCCGTGGACCGGCTCTGC
GCCCTGGCGTCTCGCCTCGACCTGGCCGTGCGAGAGGACGTGTTCAACGA
CGGGACGGTCAGGGATGTGCAACGTTCCTGTGTGACTACATCGCCGAAAG
GTTCTCGCGGGAAAATTCTCTGTCGGAGGCCGGGCTGTGGGCCACGCTCC
TGACCGACGTCCTCGTCACGGCGAGGGAGCGCGCGTACGGCAGCATCGCG
GACCAGTCCGTGGACCGGCTCTGCGCCCTGGCGTCTCGCCTCGACCTGGC
CGTGCGAGAGGACGTGTTCAACGACGGGACGGTCAGGGATGTGCAACGCC
TGTTTCGCTTGGCGACCGGGATCGGGGAAGGCCAGCACGAGCCGGGCATG
GCGGAGAGGCGAGAGGCCAAGCAGGAGGAGGCCAAGCAAAAGGACGGCAG
CACTAAGATCCAAAAGCCTGTTTCGCTTGGCGACCGGGATCGGGGAAGGC
CAGCACGAGCCGGGCATGGCGGAGAGGCGAGAGGCCAAGCAGGAGGAGGC
CAAGCAAAAGGACGGCAGCACTAAGATCCAAAAGACGTTGAAGACGGCGT
GGTCTCTGGTGTCCAAGATGGACAAGAACAAGTGGTTCAAGGACCCCGTC
ACCGAAGCGATCGCCGTGGGGTACCACAAGGTCATCAAGACTCCCATGGA
TCTGAGCACGATCCTGAAAAAGACGTTGAAGACGGCGTGGTCTCTGGTGT
CCAAGATGGACAAGAACAAGTGGTTCAAGGACCCCGTCACCGAAGCGATC
GCCGTGGGGTACCACAAGGTCATCAAGACTCCCATGGATCTGAGCACGAT
CCTGAAAAAGATCAAGGGCGGCGGGTACCCCAGCTTCGGAGACTTCGACC
GAGACTTGAAGCTCATGTGGCAGAATTGCCGCACCTACAACGGGGAGATC
AAGGGCGGCGGGTACCCCAGCTTCGGAGACTTCGACCGAGACTTGAAGCT
CATGTGGCAGAATTGCCGCACCTACAACGGGGAGGGGACGACATACAACG
CCGAAGCCTTGAGACAGGAGGAAGAGTGGTCCAAGATTTCCGCGAAGATA
GAGAACGACCTACGACACCAGGAGGGGACGACATACAACGCCGAAGCCTT
GAGACAGGAGGAAGAGTGGTCCAAGATTTCCGCGAAGATAGAGAACGACC
TACGACACCAGGAGACTCGCCCCGGCGGCGGAGGCACCGCCGCCGCCGCC
ACACCCACCAACAGCAACAAGCGGAAGAGCAGTAGCGGTAGCGGCAGTGC
TCTGTCCCAGGACGATGCCCGAGGAAGCGGCGGGGGCGGCGCGGCATTAG
CCCCGATGGCCCAGGCGACCCAGCTGGAGAGGGACGGGATCGGCCGTCGC
GTGGGGCTCGCCTCCGTGCTCCTCGCCGAGCCATTCGCGGCAAAGCTCAT
GTACCGGCACGCGTCGGAGAGGATCCCGGAGGCGTGCTGCGAGCGGGGCA
TCCTCCCGCGCGACCACCCGGTCTACGCGCCGCTGCTGCAGCTCCTGGAC
CTGGGGGAGAGCGCCCGCCACATGCTCAGAGCAAACACCTTCGGCGTGCG
CGAGGTTAAGGCCGGGGTGACGAGGGCCGCGCTGCCGTGCGTCGTGGCGC
TGCACGCGCGGGCGGCGGCGGCGGGCCGGCGGCGGGCGGGCGGGGGTCCC
GACGACGCCACTCGCCCCGGCGGCGGAGGCACCGCCGCCGCCGCCACACC
CACCAACAGCAACAAGCGGAAGAGCAGTAGCGGTAGCGGCAGTGCTCTGT
CCCAGGACGATGCCCGAGGAAGCGGCGGGGGCGGCGCGGCATTAGCCCCG
ATGGCCCAGGCGACCCAGCTGGAGAGGGACGGGATCGGCCGTCGCGTGGG
GCTCGCCTCCGTGCTCCTCGCCGAGCCATTCGCGGCAAAGCTCATGTACC
GGCACGCGTCGGAGAGGATCCCGGAGGCGTGCTGCGAGCGGGGCATCCTC
CCGCGCGACCACCCGGTCTACGCGCCGCTGCTGCAGCTCCTGGACCTGGG
GGAGAGCGCCCGCCACATGCTCAGAGCAAACACCTTCGGCGTGCGCGAGG
TTAAGGCCGGGGTGACGAGGGCCGCGCTGCCGTGCGTCGTGGCGCTGCAC
GCGCGGGCGGCGGCGGCGGGCCGGCGGCGGGCGGGCGGGGGTCCCGACGA
CGCC
back to top