mRNA_E-fasciculatus_F_contig1285.2151.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1285.2151.1
Unique NamemRNA_E-fasciculatus_F_contig1285.2151.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 769 bits (1985), Expect = 6.000e-266
Identity = 411/528 (77.84%), Postives = 447/528 (84.66%), Query Frame = 1
Query:  136 MRARLAALLWACSASLLWRFADSASVEASTLATVSAVADLFDPNLSDENGCDPSGCVAEFTRDGDMSS-GSRWSCKPALGDAGSECRITYGLGIQYPLSRLNIAMYKGDERTRTLDISIDNLPFTIWTSSGTTTGFEAIDLDVMGRWISIVGVLEDSEWLSIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSISYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFESIDLSGYSGQDITVTGVLDNSEWLSIKETEIIVLSDGVSSPPSPSTTTPAPVLAPTXXXXXXXXXXXXXXXXXXXXXVATPEQLFSAKEVGTQDTTVTTTAELFDPNLSANNGCDPSGCTAALTRDGDTGDASRWSCAPKLGGEDAVCSISYDLGREFGLNYLRVALYNGDIRVRTVDVFVDGALVTTWTSSGTTDGFESIQFVDGIAGTVIELQGVLGNSEWLSIIE 1716
            MRAR AALLWA S SLL RFAD+A VEASTLATV+AVADL+DP LS +NGCDPSGCVAE TRDGD +S  SRWSC+PALGDAGS CRITYGLGIQY L+ LNIAM+KGDERTRTL+I+IDNLP+T+WTSSGTT GFE I++D  GRWI IVGVLEDSEWLSIMEVEILVDDGVTDTDD        VVDTTEVEAGSLG VTATSALFDP L DSNGCDP GCTAELTRDGD+SD SRWSCAPSLGGTCSISYD+GAV DLS+LRLALY G TRVRTVDV VDGSLATTWTSSGTTDGFE+IDLSGYSGQDITVTGVLDN EWLSIKETEI+VLSDGV  PPS S+ TPAPV AP                      VATPEQL+SAKE+GTQDTTVTTTA+LFDP+L+ +NGCDP+GCT ALTRDGD  D SRW+CAP LGG   VC ISYDLGREFGL+ +RVALYNGDIRVRT++VFVDGALVTTWTSSGTT+GFESI   D  +GTV+ELQGVL +SEWLSIIE
Sbjct:    1 MRARQAALLWAGSTSLL-RFADAAIVEASTLATVTAVADLYDPRLSADNGCDPSGCVAELTRDGDATSLESRWSCQPALGDAGSVCRITYGLGIQYQLTGLNIAMFKGDERTRTLEINIDNLPYTVWTSSGTTAGFETIEVDTTGRWIEIVGVLEDSEWLSIMEVEILVDDGVTDTDD--------VVDTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGDVSDESRWSCAPSLGGTCSISYDLGAVYDLSKLRLALYNGATRVRTVDVSVDGSLATTWTSSGTTDGFENIDLSGYSGQDITVTGVLDNLEWLSIKETEIMVLSDGVVFPPSASSPTPAPVFAPVATPTPT---------------VATPEQLYSAKEIGTQDTTVTTTADLFDPDLAVDNGCDPAGCTGALTRDGDMTDTSRWACAPSLGG---VCFISYDLGREFGLDEVRVALYNGDIRVRTINVFVDGALVTTWTSSGTTNGFESIALPDTASGTVVELQGVLDDSEWLSIIE 501          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 681 bits (1758), Expect = 6.850e-232
Identity = 368/507 (72.58%), Postives = 414/507 (81.66%), Query Frame = 1
Query:  202 SASVEASTLATVSAVADLFDPNLS-DENGCDPSGCVAEFTRDGDMSS-GSRWSCKPALGDAGSECRITYGLGIQYPLSRLNIAMYKGDERTRTLDISIDNLPFTIWTSSGTTTGFEAIDLDVMGRWISIVGVLEDSEWLSIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSISYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFESIDLSGYSGQDITVTGVLDNSEWLSIKETEIIVLSDGVSSPPSPSTTTPAPVLAPTXXXXXXXXXXXXXXXXXXXXXVATPEQLFSAKEVGTQDTTVTTTAELFDPNLSANNGCDPSGCTAALTRDGDTGDASRWSCAPKLGGEDAVCSISYDLGREFGLNYLRVALYNGDIRVRTVDVFVDGALVTTWTSSGTTDGFESIQFVDGIAGTVIELQGVLGNSEWLSIIE 1716
            +A VEASTLATV+  A L+D  ++  + GC P+GC+ + TRDGD +S  SRWSCKPALGDAGS CRITYGLGIQY L+ LNIAMYKGDERTRTL+I+IDNLP+T+WTSSGTTT FE I++D MGRWI IVGVLEDSEWLSIMEVEILVDDGVTDTDD        V  TTEVEAGSLG VTATSALFDP L DSNGCDP GCTAELTRDGD+SDGSRWSCAPSLGGTCSISYD+GAV DLSELRLALY+GTTRVRTVDV VDGSLATTWTSSGTTDGFE++DLSGYSGQD+TVTGVLD+SEW+SI ET+I+VLSD V SPPSPSTTTPAPV AP   XXXXX              V +PEQLF+AKE+  +   VTTTA LFDP+L A+NGCDPSGCTA LTRDGD   +SRWSCAPKLGG+   C+ISYDLG+ + L  +R+A+Y GD R  T +V VDG LVTTWTSSGTT G ESI F D  +G V+E+ GVLG+SEWLSIIE
Sbjct:   23 AAVVEASTLATVTVAAPLYDTTVTASDGGCSPTGCIGDNTRDGDATSVESRWSCKPALGDAGSVCRITYGLGIQYQLTGLNIAMYKGDERTRTLEINIDNLPYTVWTSSGTTTDFETIEVDTMGRWIDIVGVLEDSEWLSIMEVEILVDDGVTDTDD--------VAGTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGDVSDGSRWSCAPSLGGTCSISYDLGAVYDLSELRLALYKGTTRVRTVDVTVDGSLATTWTSSGTTDGFENVDLSGYSGQDVTVTGVLDDSEWVSITETDIMVLSDSVVSPPSPSTTTPAPVFAPAATXXXXXK-------------VPSPEQLFAAKEID-EIGAVTTTATLFDPSLLADNGCDPSGCTAGLTRDGDYATSSRWSCAPKLGGDGDSCTISYDLGQVYNLAQIRLAMYKGDERQVTAEVRVDGVLVTTWTSSGTTVGAESILFSDTTSGQVVEVTGVLGDSEWLSIIE 507          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 587 bits (1513), Expect = 3.010e-195
Identity = 327/533 (61.35%), Postives = 387/533 (72.61%), Query Frame = 1
Query:  136 MRARLAALLWACSASLLWRFADSASVEASTLATVSAVADLFDPNLSDENGCDPSGCVAEFTRDGDMSS-GSRWSCKPALGDAGSECRITYGLGIQYPLSRLNIAMYKGDERTRTLDISIDNLPFTIWTSSGTTTGFEAIDLDVMGRWISIVGVLEDSEWLSIMEVEILVDDGVTDTDDGGVV-----DTDDVVDTTEVEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSISYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFESIDLSGYSGQDITVTGVLDNSEWLSIKETEIIVLSDGVSSPPSPSTTTPAPVLAPTXXXXXXXXXXXXXXXXXXXXXVATPEQLFSAKEVGTQDTTVTTTAELFDPNLSANNGCDPSGCTAALTRDGDTGDASRWSCAPKLGGEDAVCSISYDLGREFGLNYLRVALYNGDIRVRTVDVFVDGALVTTWTSSGTTDGFESIQFVDGIAGTVIELQGVLGNSEWLSIIE 1716
            MRA LAA+LWACSASL  RFAD+A VEASTLATV+AVADL+DP+LS ENGCDPSGCVAE TRDGD++S  SRWSC+PALGDAGSECRITYGLGIQY LS +NIAMYKGDERTRTLDISIDNLP+T WTSSGTTTG+E I+LD M +WIS+VGVLEDSEWLSIMEVEI+++DG + +DDG        D D    T+ VE GSLG VT  ++ +DP+L+   GCDP GC A+ TRDGD+S  SRWSCAP+LGG C+ISYD+G V +L ELRLA+Y+GT R  T++V VD +L TTWTSSGTTD  E+IDLSG SGQ + +TGVLD+SEWLSI E EI+V  DG        TTT                                     SA E  T  + VT  A L+DP+L+ + GCDPSGC A  TRDGD   ASRWSCAPKLGGE   CSISYDLG  + L+ +R+A++ G  R  T++V VD ALV TWTSSGTTDGFE+I  + G +G V+E+ GVL +SEWLSIIE
Sbjct:    2 MRAGLAAVLWACSASLS-RFADAAIVEASTLATVTAVADLYDPSLSAENGCDPSGCVAELTRDGDVTSLESRWSCQPALGDAGSECRITYGLGIQYQLSAVNIAMYKGDERTRTLDISIDNLPYTTWTSSGTTTGYETIELDTMAQWISVVGVLEDSEWLSIMEVEIMIEDGESGSDDGDTTATDAGDDDTTTSTSAVEVGSLGAVTVEASFYDPSLTVDGGCDPSGCVADNTRDGDLSTASRWSCAPTLGGECTISYDLGTVYELDELRLAMYKGTERQVTMEVRVDDTLVTTWTSSGTTDDLEAIDLSGTSGQTVEITGVLDDSEWLSIVEVEIMV-EDGDQGSGDDDTTTNT-----------------------------------SAVEASTLGS-VTVGASLYDPSLAVDGGCDPSGCVADNTRDGDLSAASRWSCAPKLGGE---CSISYDLGTAYDLDEVRLAMFKGTERQVTMEVRVDDALVITWTSSGTTDGFEAID-MSGTSGQVLEITGVLDDSEWLSIIE 492          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 432 bits (1111), Expect = 1.770e-137
Identity = 223/324 (68.83%), Postives = 262/324 (80.86%), Query Frame = 1
Query:  193 FADSASVEASTLATVSAVADLFDPNLSDENGCDPSGCVAEFTRDGDMSS-GSRWSCKPALGDAGSECRITYGLGIQYPLSRLNIAMYKGDERTRTLDISIDNLPFTIWTSSGTTTGFEAIDLDVMGRWISIVGVLEDSEWLSIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSISYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFESIDLSGYSGQDITVTGVLDNSEWLSIKETEIIVLSDGVSSPPS 1161
            FAD+ASVEASTLA V+AVA+L+DP LS E+GCDPSGCVAE TRDGD +S  SRW+CKPALGDAGSECRITYGLGIQY LS LNIAMYKGDERTRTL+ISIDNLP+T WTSSGTTTGFE I+LD MGRWISIVGVL DSEWLSIMEV+I++DDG T +DD          + + VEA +LG+VTA ++ +DP L+   GCDP GC  + TRDGD+S  SRWSCAP+LGG C+ISYD+G   DL ELRLA+++GT R  ++ V VD +L TTWTSSGTTDGFE+IDLSG  GQ + +TGVLD+SEWLSI E EI+VL DG S  P+
Sbjct:    2 FADAASVEASTLANVTAVAELYDPRLSAESGCDPSGCVAELTRDGDATSLESRWACKPALGDAGSECRITYGLGIQYQLSSLNIAMYKGDERTRTLEISIDNLPYTTWTSSGTTTGFETIELDTMGRWISIVGVLADSEWLSIMEVKIMIDDGETGSDDDNTT-----TNASGVEASTLGSVTAGASFYDPRLAVDGGCDPSGCVVDNTRDGDLSTASRWSCAPTLGGECTISYDLGTAYDLDELRLAMFKGTERQVSMKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQVLEITGVLDDSEWLSIIEAEIMVLEDGASPMPT 320          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.320e-111
Identity = 199/336 (59.23%), Postives = 239/336 (71.13%), Query Frame = 1
Query:  199 DSASVEASTLATVSAVADLFDPNLSDENGCDPSGCVAEFTRDGDMSSGSRWSCKPALGDAGSECRITYGLGIQYPLSRLNIAMYKGDERTRTLDISIDNLPFTIWTSSGTTTGFEAIDLDVMGRWISIVGVLEDSEWLSIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSISYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFESIDLSGYSGQDITVTGV-LDNSEWLSIKETEIIVLSDGVSSPPSPST-TTPAPVLAPT 1200
            D+A V+A TL  V+  A +FD   +   GC P+GCV   TRDG  S  SRWSC P+L  + S C ITY L  +  L  L IA+Y+GD RTRT+DIS+D      WTSSGTT+ FE+IDL V G+ + +VG L+D EWLSI+EVEILVDDG    DDG  VD         VEAG LGTVTAT+ L+D  L D+ GCDPEGCTA LTRDGDMS+ SRWSCAP LGG CSISYD+GA   + EL+LA+Y+G TRVRTV V VDG L TTWTSSGTT GFES+D+SG +GQ +T+TG  L +SEWLSI ETEI+V + GV+ PPSP+T  TP+P L PT
Sbjct:   22 DAAIVDAGTLTGVTTEAPVFDDRATLPYGCPPAGCVGANTRDGITSDESRWSCAPSLDSSDSGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGNYAFSWTSSGTTSDFESIDLGVDGKVVELVGDLQDWEWLSILEVEILVDDG----DDGSEVDV--------VEAGELGTVTATADLYDDRLGDTVGCDPEGCTAALTRDGDMSEDSRWSCAPELGGLCSISYDLGAEYSIDELQLAMYQGDTRVRTVGVAVDGDLVTTWTSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVETEIMVYN-GVAPPPSPTTPATPSPTLPPT 344          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 7.990e-105
Identity = 186/329 (56.53%), Postives = 229/329 (69.60%), Query Frame = 1
Query:  214 EASTLATVSAVADLFDPNLSDENGCDPSGCVAEFTRDGDMSSGSRWSCKPALGDAGSECRITYGLGIQYPLSRLNIAMYKGDERTRTLDISIDNLPFTIWTSSGTTTGFEAIDLDVMGRWISIVGVLEDSEWLSIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSISYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFESIDLSGYSGQDITVTGVLD-NSEWLSIKETEIIVLSDGVSSPPSPSTTTPAPVLAP 1197
            EA T+ +V+  A +FD   +   GC P GCVA  TRDGDMS  SRWSC+P+L  +GS C IT+ L     L  + IA+YKGD RTRT+D+ +D    T WTSSGTTTGFE++ L   G+ + +VG L D EWLSI+EVEI VDDG+ D D   V+D         VEA  +GTVTAT+ L+D  L D+ GCDPEGCTA LTRDGDMS+GSRWSCAP LGG CSISYD+GA  ++ +LRL +YRG +R RTVDV VDG+L TTWTSSGTT  FES+DLSG  GQ +T++G    +S+WLSI ETEI+V        P+PS TTP PV+ P
Sbjct:   26 EAGTVMSVTPEASVFDTRSTLPYGCPPDGCVAANTRDGDMSDESRWSCRPSLDASGSGCSITFTLEKVEYLGDIRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESVLLMDQGQVVELVGDLNDDEWLSILEVEIDVDDGIVDDDTVVVLDV--------VEAAEMGTVTATADLYDTRLGDTVGCDPEGCTAALTRDGDMSEGSRWSCAPKLGGPCSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIMVYEGDA---PAPSPTTPPPVVMP 343          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 6.140e-96
Identity = 222/508 (43.70%), Postives = 260/508 (51.18%), Query Frame = 1
Query:  211 VEASTLATVSAVADLFDPNLSDENGCDPSGCVAEFTRDGDMSSGSRWSCKPALGDAGSECRITYGLGIQYPLSRLNIAMYKGDERTRTLDISIDNLPFTIWTSSGTTTGFEAIDLDVMGRWISIVGVLEDSEWLSIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTV-----TATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSISYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFESIDLSGYSGQDITVTGVLDNSEWLSIKETEIIVLS-DGVSSPPSPSTTTPAPVLAPTXXXXXXXXXXXXXXXXXXXXXVATPEQLFSAKEVGTQDTTVTTTAELFDPNLSANNGCDPSGCTAALTRDGDTGDASRWSCAPKLGGEDAVCSISYDLGREFGLNYLRVALYNGDIRVRTVDVFVDGALVTTWTSSGTTDGFESIQFVDGIAGTVIELQGVLGNSEWLSIIE 1716
            VE+ T+ TV A A LFD  L+   GCDP+GC  + TR                                            GD RTRT+D+ +D    T WTSSGTT  FE + L V G+ + + GVL DSEWLSI EV+ LV+DG TDTDD             +++  S  T       AT  LF P                                                 ++S +  A  RG+                                        T T  L    +  I + +I+VLS DG++ PPSP TTTPAPV AP                      VATPEQL+SAKE+GTQDTTVTTTA+LFDP L+ +NGCDP+GCTAALTRDGDTGDASRWSCA  LGGE AVCSISYDLGREFGL+ LRVALYNGDIRVRT+DV VDG LV TWTSSGTTDGFESI F DG++GTVI LQGVL +SEWLSIIE
Sbjct:   32 VESGTVTTVEAEASLFDSRLAVAGGCDPAGCSGDKTR--------------------------------------------GDTRTRTMDVYVDQALQTSWTSSGTTNEFETVVLGVTGQTVELRGVLADSEWLSITEVKALVEDGATDTDDSEF----------QIDFPSWATELPPLPNATWRLFLPR-----------------------------------------------HNMSIMTSAHVRGSP---------------------------------------TNTSSLPALPY--IVQVKIMVLSGDGLAPPPSPPTTTPAPVFAPVATATPT---------------VATPEQLWSAKEIGTQDTTVTTTADLFDPALAIDNGCDPAGCTAALTRDGDTGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIE 382          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: D7G5L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L7_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.730e-27
Identity = 66/106 (62.26%), Postives = 74/106 (69.81%), Query Frame = 1
Query:  613 SIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSISYDIGAVRDLSELRL 930
            S+  VEILVDDG    DDG  VD         VEAG LGTVTAT+ L+D  L D+ GCDP+GCTA LTRDGDMS+ SRWSCAP LGG CSISYD GA   + EL+L
Sbjct:   22 SVSMVEILVDDG----DDGSEVDV--------VEAGELGTVTATADLYDDRLGDTVGCDPDGCTAALTRDGDMSEDSRWSCAPELGGLCSISYDRGAEYRIDELQL 115          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: D7G277_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G277_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.980e-21
Identity = 71/177 (40.11%), Postives = 103/177 (58.19%), Query Frame = 1
Query:  709 VEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSL--------GGTCSISYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFESIDLSGYSGQDITVTGVLDNS-----EWLSIKETEIIVLSDGVSSPPSPSTTTPAPVLAPT 1200
            VEAG + TVT T+  FD    D +GC P+GCT E TRDGD++D SRWSC+  L        G  C + +++G  + ++ + +A  +G TR RT+++ V+G L    TS GTT G E+ +L G +G    ++  +++S     E+LSI E EI V    V+S  + S T PAPV  PT
Sbjct:  248 VEAGEVTTVTVTTNAFDARTDD-DGCAPDGCTGENTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLETFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAVGDSTVASSAAASET-PAPVALPT 422          
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Match: D8LRJ1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ1_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 8.180e-17
Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  511 WTSSGTTTGFEAIDLDVMGRWISIVGVLEDSEWLSIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTVTATSALFDPNLSDSNGCDPEGCTAELTR 819
            WTSSG T  FE I+L V G  I + GVL DS+WLSI+EV ILVDDG    DDG  V          VEAG LG V +++  +D  L+D+ GCDP GC+A LTR
Sbjct:    5 WTSSGETAAFETIELGVQGTVIGLHGVLADSDWLSILEVGILVDDG---NDDGVAV----------VEAGELGPVASSAEFYDLRLADTVGCDPAGCSAALTR 94          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1285.2151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KFA6_9PHAE6.000e-26677.84F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KL74_9PHAE6.850e-23272.58F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
D7FTH1_ECTSI3.010e-19561.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KH45_9PHAE1.770e-13768.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL48_ECTSI1.320e-11159.23Leucine rich repeat carbohydrate binding protein n... [more]
A0A6H5L1V3_9PHAE7.990e-10556.53F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FZZ4_ECTSI6.140e-9643.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5L7_ECTSI1.730e-2762.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G277_ECTSI3.980e-2140.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRJ1_ECTSI8.180e-1752.43Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1285contigE-fasciculatus_F_contig1285:11444..16704 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.1
Seed ortholog evalue1.7e-96
Seed eggNOG ortholog2880.D7FL48
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons9
Model size1716
Cds size1581
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1285.2151.1prot_E-fasciculatus_F_contig1285.2151.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1285 11444..16569 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927788.832407-CDS-E-fasciculatus_F_contig1285:11443..116311622927788.832407-CDS-E-fasciculatus_F_contig1285:11443..11631Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 11444..11631 -
1695995695.113493-CDS-E-fasciculatus_F_contig1285:11443..116311695995695.113493-CDS-E-fasciculatus_F_contig1285:11443..11631Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 11444..11631 -
1622927788.843084-CDS-E-fasciculatus_F_contig1285:12315..124361622927788.843084-CDS-E-fasciculatus_F_contig1285:12315..12436Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 12316..12436 -
1695995695.1348212-CDS-E-fasciculatus_F_contig1285:12315..124361695995695.1348212-CDS-E-fasciculatus_F_contig1285:12315..12436Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 12316..12436 -
1622927788.8579957-CDS-E-fasciculatus_F_contig1285:12689..129801622927788.8579957-CDS-E-fasciculatus_F_contig1285:12689..12980Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 12690..12980 -
1695995695.150432-CDS-E-fasciculatus_F_contig1285:12689..129801695995695.150432-CDS-E-fasciculatus_F_contig1285:12689..12980Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 12690..12980 -
1622927788.8686392-CDS-E-fasciculatus_F_contig1285:13341..135261622927788.8686392-CDS-E-fasciculatus_F_contig1285:13341..13526Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 13342..13526 -
1695995695.1593404-CDS-E-fasciculatus_F_contig1285:13341..135261695995695.1593404-CDS-E-fasciculatus_F_contig1285:13341..13526Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 13342..13526 -
1622927788.8787718-CDS-E-fasciculatus_F_contig1285:13775..138871622927788.8787718-CDS-E-fasciculatus_F_contig1285:13775..13887Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 13776..13887 -
1695995695.1691308-CDS-E-fasciculatus_F_contig1285:13775..138871695995695.1691308-CDS-E-fasciculatus_F_contig1285:13775..13887Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 13776..13887 -
1622927788.893755-CDS-E-fasciculatus_F_contig1285:14174..143691622927788.893755-CDS-E-fasciculatus_F_contig1285:14174..14369Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 14175..14369 -
1695995695.1830878-CDS-E-fasciculatus_F_contig1285:14174..143691695995695.1830878-CDS-E-fasciculatus_F_contig1285:14174..14369Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 14175..14369 -
1622927788.9041402-CDS-E-fasciculatus_F_contig1285:14626..148081622927788.9041402-CDS-E-fasciculatus_F_contig1285:14626..14808Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 14627..14808 -
1695995695.196328-CDS-E-fasciculatus_F_contig1285:14626..148081695995695.196328-CDS-E-fasciculatus_F_contig1285:14626..14808Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 14627..14808 -
1622927788.9181805-CDS-E-fasciculatus_F_contig1285:15520..156411622927788.9181805-CDS-E-fasciculatus_F_contig1285:15520..15641Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 15521..15641 -
1695995695.2185073-CDS-E-fasciculatus_F_contig1285:15520..156411695995695.2185073-CDS-E-fasciculatus_F_contig1285:15520..15641Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 15521..15641 -
1622927788.929635-CDS-E-fasciculatus_F_contig1285:16383..165691622927788.929635-CDS-E-fasciculatus_F_contig1285:16383..16569Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 16384..16569 -
1695995695.230064-CDS-E-fasciculatus_F_contig1285:16383..165691695995695.230064-CDS-E-fasciculatus_F_contig1285:16383..16569Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1285 16384..16569 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927788.941396-UTR-E-fasciculatus_F_contig1285:16569..167041622927788.941396-UTR-E-fasciculatus_F_contig1285:16569..16704Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1285 16570..16704 -
1695995695.239562-UTR-E-fasciculatus_F_contig1285:16569..167041695995695.239562-UTR-E-fasciculatus_F_contig1285:16569..16704Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1285 16570..16704 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1285.2151.1

>prot_E-fasciculatus_F_contig1285.2151.1 ID=prot_E-fasciculatus_F_contig1285.2151.1|Name=mRNA_E-fasciculatus_F_contig1285.2151.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=527bp
MRARLAALLWACSASLLWRFADSASVEASTLATVSAVADLFDPNLSDENG
CDPSGCVAEFTRDGDMSSGSRWSCKPALGDAGSECRITYGLGIQYPLSRL
NIAMYKGDERTRTLDISIDNLPFTIWTSSGTTTGFEAIDLDVMGRWISIV
GVLEDSEWLSIMEVEILVDDGVTDTDDGGVVDTDDVVDTTEVEAGSLGTV
TATSALFDPNLSDSNGCDPEGCTAELTRDGDMSDGSRWSCAPSLGGTCSI
SYDIGAVRDLSELRLALYRGTTRVRTVDVLVDGSLATTWTSSGTTDGFES
IDLSGYSGQDITVTGVLDNSEWLSIKETEIIVLSDGVSSPPSPSTTTPAP
VLAPTPSPSTTTPAPVFAPVATPTPTVATPEQLFSAKEVGTQDTTVTTTA
ELFDPNLSANNGCDPSGCTAALTRDGDTGDASRWSCAPKLGGEDAVCSIS
YDLGREFGLNYLRVALYNGDIRVRTVDVFVDGALVTTWTSSGTTDGFESI
QFVDGIAGTVIELQGVLGNSEWLSIIE
back to top

mRNA from alignment at E-fasciculatus_F_contig1285:11444..16704-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1285.2151.1 ID=mRNA_E-fasciculatus_F_contig1285.2151.1|Name=mRNA_E-fasciculatus_F_contig1285.2151.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5261bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1285:11444..16704- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGACAACAAGCAGCCACACGCCCGCACTCGCCTCTCACACATCACTCTTG TTCGCTCGCTCTCTGGCACAGACTCCCTCTCGTCAAACAGTAGTAGTGGC CGACAGCACAAGCCGACAGCCGGCAACGAGTGAGTATGAGGGCCCGACTG GCGGCCCTTCTTTGGGCGTGTTCTGCTAGCCTCCTCTGGAGGTTCGCGGA CTCAGCCTCCGTCGAGGCTAGCACCTTGGCCACCGTGTCCGCGGTGGCAG ACCTGTTCGACCCAAACCTCAGCGATGAGAACGGATGCGATCCGTCAGGG TGTGTCGCTGAGTTTACCAGAGTGAGTGAAGTTTGCAACCACTGCTGTTG ACGAATGAATGATTGCGGAGATTTTTTGACTGACCCGGTGAACATTCAGT TTCAAGTCTCTCTCTCGCTCCTTGAAGACTCAGAGCTCTTTGCCATCCAT GCTGAACGCACAACTACTTGTTGATCCGGGTGGACTCCAGTTCAACTCTC CGGCTGATGTTCGTACAACCTCAATGTTCGTTCGGATTCCAAGCGCAGAA GAAGGAGAACTACTGCTTAAGTAAACCAGCTGCTGAAAAACATTCTTTGT GCTCCCTGGTCACTAAAGATACCCCGATATTTCCCCGATACCACCGCCGT TGTACCGGAGAGAGGCAAGGTTACTGATACTGCTGTAGTTCAGGGTTGAA GAACTAAAACAAAAAACTATTATAATATGATTCGAGTACAGATGTAAGCA GGACTGCTGTAAGCAGTTCATGGTCGCAGGAGGAAGGAGCCTTCAGCGTC CTCATCATCAATGAAAGCACAGTAGAGAATGCAAGTTAATAATAATTGTA TCTACATGTATGCATCCATAGTAGTCTACGTCGTGGGCTGGCCTTACTGG CTTGTTGTATTGGCTGTACACGTAACTAGACTCGTTGTTCCCGTGTGTTT ATATCAACGACTACATGTATGTATGTAGGCACATCCACGCTGCTGTCATC TCCATTATTAGAACGCTTTGTTTGGTTGAAATTGGTGCGTTCTCTTCGAT TTTGCGCCCCCAGGATGGAGACATGTCATCTGGCTCCCGCTGGTCATGCA AGCCCGCCCTTGGCGATGCCGGCTCGGAGTGTAGGATCACATACGGCCTG GGCATCCAATACCCGCTGTCCAGGTTGAACATCGGTACGTATGATGTGGT GCATGTGCGGTAGATCCTCATCGATTGATGTGCTGCCTCGAAAAAACTCT ACCCCTCCTCTCCTTGGTCTACAGCAGTCTACCATAATAAATAGTCTAGA TTGTTTACTGACAGCAGTAGTTCCCGTGGTAGTCGTGACCGCTGCTGCGC AGGTTTTCGCGTCGATAGTTATTTGCTCCACTCATAGTGTACTACTGCTG TAGGCATATGATATTGCACTAAATATGGTCGTGGTCTGTGTTACGGGGGA TGACGGGATAAATCCGTACCTCGAAGGGTACGACAATACTTAGTCTAGTC AAGAAAATACCAATTTGTCTTGCCGATTTTGGGGGGAAGGGGTGCCTGTC GTGGTGAAGTTACTTCACCTTGCGTGTCGACGGTAAGGGCGGGCTCTGTG TATCGATCCCCTTATTCTATCGATCGATCTCCTGAGACTCCACCTGCTAC AAAGTCTGTTAATTTTGTTTGGGTACATCATCTTCTCCGGTAAATGTTGG CGTAGCGTGGTTCTTTGTAGCAGTTTTTCTGGGTCATTTGTCGCAATAGA AATGCCCCGGCTCTTTGAATATTCTTGTGCAAGGTCTGACTGTTTAAAGT CACAAACTTGCGTGACCACCCAAGGCAGGGCTGAAATCCACAATATGTGA AAACACATCGCGTTATCTCAAATTCCTCTGTGACGATTGCTCGCAGCGAT GTACAAGGGTGACGAGCGGACGAGGACCCTCGACATTAGCATCGACAACC TCCCGTTCACTATCTGGACCAGCTCGGGCACGACCACCGGCTTCGAAGCC ATCGACCTCGACGTGATGGGGCGATGGATCTCGATTGTCGGGGTTCTCGA GGACTCGGAGTGGCTCAGCATCATGGAGGTTTGTTGGTGTGACGTTTTTG CCCGGTCGTGCCGGATTCCCTCTAACCGCATATGCTGTGCTTGTGGCCAG GTCTGTGCGCGCGGCACGCTCACACGCCTAATGAATCTCCGCAAACGATT CATGAGTGTCGCACAAACGGCGTCGTGTCTCAGAAGTCCCAGTACCCTGC CGGCGTTTGGTGTGGTGCCTGAATCATTGCTTGCAGAGTCCAACGATCGT GGCATTTTCTTCTCGTTCTTTCTGTCTCGGAACAGGTGGAGATTCTCGTT GACGACGGTGTCACCGATACCGATGACGGTGGTGTTGTCGATACCGATGA TGTTGTTGACACAACGGAGGTCGAGGCCGGCTCCCTTGGAACCGTCACGG CCACGTCTGCCCTCTTCGATCCCAACCTCAGTGACTCCAATGGATGCGAC CCCGAGGGATGCACGGCGGAACTCACAAGGGTAAGCGATCCGTATGCGTT GCTGATGCAAGACGGAGGAGGCGGGAGGCCTCCTACTACGATAGCAGTGC GATGACCCTCAAGCCGATCAACAAGTCCAATGGTCTCGTAGTGCACCAAG CCACAGAAAGCGTGTGTCAATGCCCATGAAGGTCGCGCACGGAGTTCCCT ACCCACCGGTACTCCCTCTCCGACGCTCTTTCCCCTCAGAGATCGTCGTT TACCTCGCTCTTCCTCCCAAGCAACAGCCTCGCTTGACCAAAATATCATG TTGTCTACCCCGCACAGGATGGGGACATGTCGGACGGTTCCAGGTGGTCC TGTGCCCCCTCGCTCGGCGGCACGTGCAGCATCTCCTACGACATCGGGGC CGTCCGCGACCTCTCCGAGCTCCGCCTCGGTAAGTCCGCCTTCGTTCACG TTCGCAACGGACCATGCTGAACTGTAATCCCTTGCCGCGTCCTTTGCATA CCACGGTCAACCCATCATCTCTAGCACTTACTTTCATCTACGTTGAGTTT TGGCACCGTCTCATCTCGGCACGAACACAGCTTGCCTCATCCCCTCCAAT ACGTGACTAAGTTTCGCACGATTGTCACCATCAACCGTTGCAATACATAG TTACCCGATTCTTCCTACCCATTGGCAGCGCTGTACAGGGGAACGACCAG GGTCAGGACGGTCGACGTTTTAGTCGATGGTTCCCTCGCGACCACCTGGA CCAGCTCGGGCACGACGGACGGCTTCGAGAGCATTGACTTGTCGGGGTAC TCTGGGCAAGACATCACCGTCACGGGCGTCCTGGACAATTCGGAGTGGCT GAGCATCAAAGAGGTGAGGAAGCATGGTTCGCCACGACAAAGTCTGCGTA TATTCGGCGACGGCGCCTTCATGTAGTTCATGTAGCTGTCTCGTCCGGGA TTTTCGTGTCATCATGTGGTTATGGTGTTTAACCGACAGGGTTTTGTTGT TGCGTGGAGTTGCTGGCTTGGCATGCTGAGCATCGCGGTAGACAAGAAAT TTCAGATTGTTTTCCCCCATCCTCACGCGCTGAAGTGCGCCGGTCCCAAA CTGCGGTCTGAACGGCACGTTTTCCGCCGCAGAACATCGTAACCTACGCG TTTGTGCAACTGTTAATATTCGCCGCGAATGCGCCATTCTTTCTTGATTT GCCCCGTGCCGCCATTCCACGTAGACGGAGATCATCGTGCTGTCGGACGG CGTCTCTTCGCCGCCCAGCCCTTCTACGACCACTCCGGCTCCCGTCTTAG CTCCCACGCCCAGCCCTTCAACAACCACGCCAGCTCCCGTCTTCGCTCCC GTTGCTACCCCGACCCCGACGGTCGCCACTCCCGAGCAACTCTTTTCTGC CAAAGAAGTCGGGACCCAGGACACTACTGTCACCACCACGGCGGAGCTGT TCGACCCCAACCTTTCCGCCAATAACGGATGCGATCCGTCCGGATGCACG GCGGCACTCACAAGGGTAATTTGCTACAATACAACACTGGAGCCGTGTGT TGCGTTCCACCTCCTGCATTTCGCGAGAGGATAGGCGTTGCTTCGTCTTT TTCCGTTTTTGCGAATGTACAGAAGGCCTCCTTACAGTAGCACGTGCCCG ACACCATTCCGTCTTTGTTGCTACCAATTTTTTTCATCGCGTCTTGTCCA GAGGTAGGAGCATAAGACACCCCTCCCCGCGTTTGATGCCCCGCGGTGGT TATCGTTACCTACGAAAGGATGGTGACACTGGAGATGCCTCCCGGTGGTC TTGCGCGCCTAAGCTTGGTGGTGAAGACGCCGTCTGTTCCATCTCGTACG ACCTTGGGCGAGAGTTTGGCCTTAACTATCTGCGTGTCGGTGAGAGACGA AAGCAAGCGCTCTTGTTGTGCCAGAAGAGGCCTAAACAACCGCTGTCAAG CTCGTCCCTGCCTTTCCGACCCGGCAACCTCTCTTTCTAAATGTGCGTAG GGGCAGCCAGAATCGTGTCAAGATCATCAAAATCGTGTTGTCATTGCTAC CTGACGGAGTATCCGGCGCGCTTCTAATGTCTACGGCGGTAGAGTCCACC TCGTTTTAATCATCCGGTATCCCCATGGGACCTTGCATGCGTGCCATATT TCTCCCTTTCCTCCTGCCCCCCTCGTCTGCTCTGCGCCGGGCCGTTCGCT GACGTGGCCTACATCCGAGTAACACAAAAGCTGAAACAGCTTTATTCGAA AGTCTCCCCTTCTTCGCCCACAATGAGCTACCCTCCTCTATGTCAACTCC CAACTACTCCGCGAATCCCTCAACATCGTCTCCATCATCACAAATTCACG ACACCGCAAGTCTGATACACATGAAGTGTTTTAAGTGAGATGTACAACGC TGTACCGTGTTACGTTTTCGGGCCGTTAGCAATGGACACTGTTCGGGAAG CCGGGCGTGCGTCTGGTTTCCAGCAGATTTCGACTCGGCCAGCTTTTTAA AAAACACATGTCCTAGTGTATTTCGTTTTGCTGCTGTCTTGACGCCCCCC CTGGTTCCCGGTGCTGCTGCCAGCGCTGTACAACGGGGACATCAGGGTCA GGACGGTTGACGTTTTCGTCGATGGTGCGCTGGTGACCACGTGGACCAGC TCGGGCACGACGGATGGCTTTGAGAGCATCCAATTCGTTGACGGCATCGC CGGAACGGTGATCGAGCTGCAAGGGGTCTTGGGCAACTCGGAATGGCTCA GCATCATCGAG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1285:11444..16704-

>mRNA_E-fasciculatus_F_contig1285.2151.1 ID=mRNA_E-fasciculatus_F_contig1285.2151.1|Name=mRNA_E-fasciculatus_F_contig1285.2151.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3162bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1285:11444..16704- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGGGCCCGACTGGCGGCCCTTCTTTGGGCGTGTTCTGCTAGCCTCCT
CTGGAGGTTCGCGGACTCAGCCTCCGTCGAGGCTAGCACCTTGGCCACCG
TGTCCGCGGTGGCAGACCTGTTCGACCCAAACCTCAGCGATGAGAACGGA
TGCGATCCGTCAGGGTGTGTCGCTGAGTTTACCAGAATGAGGGCCCGACT
GGCGGCCCTTCTTTGGGCGTGTTCTGCTAGCCTCCTCTGGAGGTTCGCGG
ACTCAGCCTCCGTCGAGGCTAGCACCTTGGCCACCGTGTCCGCGGTGGCA
GACCTGTTCGACCCAAACCTCAGCGATGAGAACGGATGCGATCCGTCAGG
GTGTGTCGCTGAGTTTACCAGAGATGGAGACATGTCATCTGGCTCCCGCT
GGTCATGCAAGCCCGCCCTTGGCGATGCCGGCTCGGAGTGTAGGATCACA
TACGGCCTGGGCATCCAATACCCGCTGTCCAGGTTGAACATCGGATGGAG
ACATGTCATCTGGCTCCCGCTGGTCATGCAAGCCCGCCCTTGGCGATGCC
GGCTCGGAGTGTAGGATCACATACGGCCTGGGCATCCAATACCCGCTGTC
CAGGTTGAACATCGCGATGTACAAGGGTGACGAGCGGACGAGGACCCTCG
ACATTAGCATCGACAACCTCCCGTTCACTATCTGGACCAGCTCGGGCACG
ACCACCGGCTTCGAAGCCATCGACCTCGACGTGATGGGGCGATGGATCTC
GATTGTCGGGGTTCTCGAGGACTCGGAGTGGCTCAGCATCATGGAGCGAT
GTACAAGGGTGACGAGCGGACGAGGACCCTCGACATTAGCATCGACAACC
TCCCGTTCACTATCTGGACCAGCTCGGGCACGACCACCGGCTTCGAAGCC
ATCGACCTCGACGTGATGGGGCGATGGATCTCGATTGTCGGGGTTCTCGA
GGACTCGGAGTGGCTCAGCATCATGGAGGTGGAGATTCTCGTTGACGACG
GTGTCACCGATACCGATGACGGTGGTGTTGTCGATACCGATGATGTTGTT
GACACAACGGAGGTCGAGGCCGGCTCCCTTGGAACCGTCACGGCCACGTC
TGCCCTCTTCGATCCCAACCTCAGTGACTCCAATGGATGCGACCCCGAGG
GATGCACGGCGGAACTCACAAGGGTGGAGATTCTCGTTGACGACGGTGTC
ACCGATACCGATGACGGTGGTGTTGTCGATACCGATGATGTTGTTGACAC
AACGGAGGTCGAGGCCGGCTCCCTTGGAACCGTCACGGCCACGTCTGCCC
TCTTCGATCCCAACCTCAGTGACTCCAATGGATGCGACCCCGAGGGATGC
ACGGCGGAACTCACAAGGGATGGGGACATGTCGGACGGTTCCAGGTGGTC
CTGTGCCCCCTCGCTCGGCGGCACGTGCAGCATCTCCTACGACATCGGGG
CCGTCCGCGACCTCTCCGAGCTCCGCCTCGGATGGGGACATGTCGGACGG
TTCCAGGTGGTCCTGTGCCCCCTCGCTCGGCGGCACGTGCAGCATCTCCT
ACGACATCGGGGCCGTCCGCGACCTCTCCGAGCTCCGCCTCGCGCTGTAC
AGGGGAACGACCAGGGTCAGGACGGTCGACGTTTTAGTCGATGGTTCCCT
CGCGACCACCTGGACCAGCTCGGGCACGACGGACGGCTTCGAGAGCATTG
ACTTGTCGGGGTACTCTGGGCAAGACATCACCGTCACGGGCGTCCTGGAC
AATTCGGAGTGGCTGAGCATCAAAGAGCGCTGTACAGGGGAACGACCAGG
GTCAGGACGGTCGACGTTTTAGTCGATGGTTCCCTCGCGACCACCTGGAC
CAGCTCGGGCACGACGGACGGCTTCGAGAGCATTGACTTGTCGGGGTACT
CTGGGCAAGACATCACCGTCACGGGCGTCCTGGACAATTCGGAGTGGCTG
AGCATCAAAGAGACGGAGATCATCGTGCTGTCGGACGGCGTCTCTTCGCC
GCCCAGCCCTTCTACGACCACTCCGGCTCCCGTCTTAGCTCCCACGCCCA
GCCCTTCAACAACCACGCCAGCTCCCGTCTTCGCTCCCGTTGCTACCCCG
ACCCCGACGGTCGCCACTCCCGAGCAACTCTTTTCTGCCAAAGAAGTCGG
GACCCAGGACACTACTGTCACCACCACGGCGGAGCTGTTCGACCCCAACC
TTTCCGCCAATAACGGATGCGATCCGTCCGGATGCACGGCGGCACTCACA
AGGACGGAGATCATCGTGCTGTCGGACGGCGTCTCTTCGCCGCCCAGCCC
TTCTACGACCACTCCGGCTCCCGTCTTAGCTCCCACGCCCAGCCCTTCAA
CAACCACGCCAGCTCCCGTCTTCGCTCCCGTTGCTACCCCGACCCCGACG
GTCGCCACTCCCGAGCAACTCTTTTCTGCCAAAGAAGTCGGGACCCAGGA
CACTACTGTCACCACCACGGCGGAGCTGTTCGACCCCAACCTTTCCGCCA
ATAACGGATGCGATCCGTCCGGATGCACGGCGGCACTCACAAGGGATGGT
GACACTGGAGATGCCTCCCGGTGGTCTTGCGCGCCTAAGCTTGGTGGTGA
AGACGCCGTCTGTTCCATCTCGTACGACCTTGGGCGAGAGTTTGGCCTTA
ACTATCTGCGTGTCGGATGGTGACACTGGAGATGCCTCCCGGTGGTCTTG
CGCGCCTAAGCTTGGTGGTGAAGACGCCGTCTGTTCCATCTCGTACGACC
TTGGGCGAGAGTTTGGCCTTAACTATCTGCGTGTCGCGCTGTACAACGGG
GACATCAGGGTCAGGACGGTTGACGTTTTCGTCGATGGTGCGCTGGTGAC
CACGTGGACCAGCTCGGGCACGACGGATGGCTTTGAGAGCATCCAATTCG
TTGACGGCATCGCCGGAACGGTGATCGAGCTGCAAGGGGTCTTGGGCAAC
TCGGAATGGCTCAGCATCATCGAGCGCTGTACAACGGGGACATCAGGGTC
AGGACGGTTGACGTTTTCGTCGATGGTGCGCTGGTGACCACGTGGACCAG
CTCGGGCACGACGGATGGCTTTGAGAGCATCCAATTCGTTGACGGCATCG
CCGGAACGGTGATCGAGCTGCAAGGGGTCTTGGGCAACTCGGAATGGCTC
AGCATCATCGAG
back to top