mRNA_E-fasciculatus_F_contig12739.2083.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: D7G2N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2N4_ECTSI) HSP 1 Score: 261 bits (668), Expect = 3.520e-87 Identity = 139/156 (89.10%), Postives = 139/156 (89.10%), Query Frame = 1
Query: 1 NNITPLQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
N I QGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEA RIVANGEL VLTNKI RLQRDIDQ VEQDIQQA VA STA AAQAQPSA PPCSSLAEWFAAYGEPAP ASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR
Sbjct: 36 NFILTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELTVLTNKIARLQRDIDQ----VEQDIQQADVVASSTAAAAQAQPSARPPCSSLAEWFAAYGEPAPSASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 187
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: A0A7S2UW48_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW48_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.870e-36 Identity = 71/154 (46.10%), Postives = 98/154 (63.64%), Query Frame = 1
Query: 1 NNITPLQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRI 462
N I +GGLN+ +RQ CKNLE A+A+A RPG EYY+ E RI+A +L +LTNKI ++QR++DQ + +EQ LS +Q P P ++L +WFA YG P PP + G ++ FE S K+YGGT HHRAFK+Q+ +KKG +
Sbjct: 45 NEILTREGGLNEVSRQACKNLEAAVAVAQRPGYFEYYQAPAEVQRIIAADDLKLLTNKINQIQRELDQIDSEIEQ---------LSKQHYSQRNP---PQVNNLGQWFAVYGTPKPPPN-GTLSVFEPSDKVYGGTQHHRAFKSQSRSLKKGTV 185
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: A0A7S2FSZ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSZ0_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.690e-31 Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = 1
Query: 13 PLQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
P + GLN+ +R+T KNLE A+ ++ RPG EYY+P+ E I NGE+ L K+ RL +I Q A Q+I+ A+ + S+ P +SLA+W A YG P SG + F ++PKIYGGT HHRAFKTQ+ MK+GR+ R
Sbjct: 31 PGEDGLNESSRKTMKNLEVAVVVSKRPGFFEYYKPAPEVEAIQKNGEIQHLVKKLNRLGGEIAQLDAE-SQNIE---------AMRKPLKMSSGPELTSLAQWNARYGTVEKPVPSGFYSGFNDAPKIYGGTEHHRAFKTQSRTMKRGRLIR 172
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: A0A067CQ53_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ53_SAPPC) HSP 1 Score: 118 bits (295), Expect = 6.910e-31 Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 25 GLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
GLN+ +R+TCKNLE AI + +PG YY + A IV NGEL L + IV+LQ+ IDQ A +E AA++ A +L +WF+ YG P P +SG++T+F PK+YGGT H+ AFK+Q+ MKKGR+T+
Sbjct: 28 GLNEASRKTCKNLEAAITASKKPGYFLYYEQPDVAKAIVKNGELRKLQSAIVQLQQKIDQVDAEIEVQ-------------AAKSSAPAPAEVQTLKQWFSTYGTPKP-VTSGVLTSFAADPKVYGGTEHYSAFKSQSLTMKKGRLTK 161
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: A0A1V9ZEM2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEM2_9STRA) HSP 1 Score: 118 bits (295), Expect = 7.730e-31 Identity = 62/149 (41.61%), Postives = 88/149 (59.06%), Query Frame = 1
Query: 22 GGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
GGLN+ +R+TCKNLE AI + +PG YY + +V NGEL L IV+LQ+ IDQ A + +A A ++ + SL +WF+ YG P P +SG++T+F PK+YGGT H+ AFK+Q+ MKKGR+T+
Sbjct: 30 GGLNEASRKTCKNLEAAITASKKPGYFLYYEQPDVVKAVVKNGELRKLQGVIVQLQQKIDQIDAELANHAAKAAAAPVTNEV------------QSLKQWFSTYGTPKP-VTSGMLTSFATDPKVYGGTEHYSAFKSQSLTMKKGRLTK 165
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: A0A3R6VT06_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VT06_9STRA) HSP 1 Score: 115 bits (289), Expect = 7.740e-30 Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = 1
Query: 22 GGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
GGLN+ +R+ CKNLE AI + +PG Y+ + +V NGEL L IV++Q+ ID A + + A A A +TA +++ SL +W + YG P P SSG++T F +PK+YGGT H+ AFKTQ+T MKKGRIT+
Sbjct: 35 GGLNETSRKVCKNLEAAITASKKPGYFMYFEQPDVVKAVVKNGELRKLQTAIVQIQQKIDLVDAEITNN---ARANATTTASGRESE------IQSLKQWLSTYGTPKP-VSSGILTCFSANPKVYGGTEHYSAFKTQSTTMKKGRITK 173
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: A0A7S2SKE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKE1_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.730e-29 Identity = 65/158 (41.14%), Postives = 90/158 (56.96%), Query Frame = 1
Query: 1 NNITPLQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVE--QDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
N I + GLND + +T +NLE A+ ++ +PG EY++ E V N +L LT K+ R+Q +IDQ A +E + Q A AL SL +W A +G P P S G + F+++PKIYGGTNHHRAFKTQ+ MK+GR+TR
Sbjct: 47 NAILTRENGLNDTSHKTMRNLEVAVVVSKQPGFFEYFQAPSEVQAAVRNNDLVQLTKKVKRIQSEIDQIDAEIEHLRSKQTPAAPALGE-------------MRSLKQWLAHHGAPKQPPS-GYFSTFQDAPKIYGGTNHHRAFKTQSMTMKRGRLTR 190
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: A0A6G0X4V5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4V5_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.820e-29 Identity = 61/149 (40.94%), Postives = 89/149 (59.73%), Query Frame = 1
Query: 22 GGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
GGLN+ +R+TCKNLE AI+ + +PG Y+ E I+ NGEL L I++L + I+Q + + AG V + A+ Q + +WF YG P P +SG++T+F +PK+YGGT H+ AFKTQ+T MKKGR+T+
Sbjct: 30 GGLNETSRKTCKNLEAAISASKKPGYFSYFDQPEVVKAIIKNGELRKLQTAILQLHQKIEQVDVEIANHTK-AGNVPGAAGTASDIQ--------TFKQWFTTYGTPKP-VTSGVLTSFSANPKVYGGTEHYSAFKTQSTTMKKGRLTK 168
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: A0A1V9ZCG4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCG4_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.970e-29 Identity = 61/147 (41.50%), Postives = 87/147 (59.18%), Query Frame = 1
Query: 28 LNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
LN+ +R+TCKNLE AI + +PG YY + +V NGEL L N IV+LQ+ IDQ + + Q G ++ + + SL +WFA YG P P +SG++T+F PK+YGGT H+ AFK+Q+ MKKGR+T+
Sbjct: 29 LNEASRKTCKNLEAAITASKKPGYFSYYEQPDVVKAVVKNGELRKLQNAIVQLQQKIDQIDGEL---MNQQGTNSIENGGQSDSN------VQSLKQWFATYGTPKP-VTSGMLTSFVNDPKVYGGTEHYAAFKSQSLTMKKGRLTK 165
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Match: G4YKG6_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YKG6_PHYSP) HSP 1 Score: 110 bits (276), Expect = 6.290e-28 Identity = 61/156 (39.10%), Postives = 84/156 (53.85%), Query Frame = 1
Query: 1 NNITPLQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGELAVLTNKIVRLQRDIDQACARVEQDIQQAGAVALSTAIAAQAQPSASPPCSSLAEWFAAYGEPAPPASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 468
N + GG N+ +R+TCKNLE AI + RPG YY E ++ G + L +IV LQ+ IDQ ++E+ + G T I +SL W A YG P P ++S L T F K+YGGT H+ AF+TQA+ MKKGR+T+
Sbjct: 26 NELLDAPGGFNEVSRKTCKNLEAAITASKRPGYFAYYEQPENVKNVLRTGGMQRLQEQIVHLQKQIDQLTEKIEKSAE--GHEVGHTGIT----------ITSLKHWLATYGTPKPQSTSDLFTVFTPDKKVYGGTAHYSAFRTQASTMKKGRLTK 169 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12739.2083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12739.2083.1 >prot_E-fasciculatus_F_contig12739.2083.1 ID=prot_E-fasciculatus_F_contig12739.2083.1|Name=mRNA_E-fasciculatus_F_contig12739.2083.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=157bp NNITPLQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEATRIVANGback to top mRNA from alignment at E-fasciculatus_F_contig12739:1516..3125- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12739.2083.1 ID=mRNA_E-fasciculatus_F_contig12739.2083.1|Name=mRNA_E-fasciculatus_F_contig12739.2083.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1610bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12739:1516..3125- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12739:1516..3125- >mRNA_E-fasciculatus_F_contig12739.2083.1 ID=mRNA_E-fasciculatus_F_contig12739.2083.1|Name=mRNA_E-fasciculatus_F_contig12739.2083.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=942bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12739:1516..3125- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |