mRNA_E-fasciculatus_F_contig12682.2049.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12682.2049.1
Unique NamemRNA_E-fasciculatus_F_contig12682.2049.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: D8LJM0_ECTSI (Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM0_ECTSI)

HSP 1 Score: 518 bits (1335), Expect = 4.960e-179
Identity = 254/258 (98.45%), Postives = 256/258 (99.22%), Query Frame = 1 
Query:    1 GAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREVAGILKV 774
            GAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPM ISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAG KPFLGLKRPDFYNRVVDEGERPPL+PEWPQPVR+LLESCWRTNLDERLSFREVAGILKV
Sbjct:  353 GAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPMRISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGIKPFLGLKRPDFYNRVVDEGERPPLNPEWPQPVRNLLESCWRTNLDERLSFREVAGILKV 610
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: A0A6H5JJI7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI7_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 7.440e-179
Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 1 
Query:    1 GAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREVAGILKV 774
            GAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPM ISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIA+HQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFY+RVVDEGERPPL+PEWPQPVRHLLESCWRTNLDERLSFREVAGILKV
Sbjct:  400 GAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPMRISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIANHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYSRVVDEGERPPLNPEWPQPVRHLLESCWRTNLDERLSFREVAGILKV 657
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.440e-76
Identity = 123/257 (47.86%), Postives = 170/257 (66.15%), Query Frame = 1 
Query:   19 YTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLL-----------REHREKPMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREV 756
            +TA++NG+ VV+KT  P+    A+A N++E E+ +   L H+NIV+L+GAG    G RFV LE L GGTL+ +L           R  + K +   +VL+ + +L +AL Y H  AVPG +V HRD+KPDNIGF  DGTLKLIDFGL K++        + Y ++G TGSLRYMAPE+AD++ YN K DVYSF +I+WEMLA  KP+ GL R  FY R+VD GERPP++ +WP+ +  L+  CW  ++++R SF  V
Sbjct:   66 HTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLSHENIVALVGAGLTSKGVRFVVLERLDGGTLTQVLGYDTRIRDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAV 322
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 9.020e-72
Identity = 131/296 (44.26%), Postives = 167/296 (56.42%), Query Frame = 1 
Query:    1 GAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFL------PDG------------------RRFVALEYLSGGTL---------------SSLLREHREK-PMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREVAGIL 768
            G MC  YTA   G++VV+K P  D +   VA  DLE E+ +L+ L H NIV +LGAGF+      PDG                  +RFV LEYL GGTL               SS++R  ++       K +D +L L +AL YLH  A+ G  V HRDLKP+NI F+ DG LKL DFGL KI++R+    +++Y MTG TGS RYM PE+A    YNEK DVYSF LI+WEML+  +PF GL R +F   V+  G RPPL  EW   +R L+  CW  ++D R  F EV   L
Sbjct:   54 GGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTL 349
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: A0A6V2JN82_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2JN82_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.800e-69
Identity = 116/257 (45.14%), Postives = 164/257 (63.81%), Query Frame = 1 
Query:   19 YTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLL-----------REHREKPMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREV 756
            +TA+LNG+ VV+KT  P+    AVA N++E+E+ +  +L H NI SL+GAG    G RF+ LE L GGTL+ +L           R  R+K     +V+  +  + +AL Y H  A+PG +  HRDLKPDNIGF  DG +KL+DFGL +I+K       + YHM+G TGSLRYMAPE+A    YN+K DVYSF +I+WE+ A  KP+ G+ + +FY RVV+  ERPP++ +WP+ +  L++ CW  +   R SF E+
Sbjct:  383 HTAVLNGRPVVVKTLKPECQDVAVAINEIELELDIHSKLDHANICSLVGAGTTSKGVRFIVLERLDGGTLTQMLGYDNRIRDRRRRFWRKKQFAFVEVMRFARCIADALNYCHSQAIPGNMCLHRDLKPDNIGFTLDGKVKLLDFGLARIVKNSDSDSNDVYHMSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPSFHEI 639
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 2.770e-69
Identity = 126/277 (45.49%), Postives = 169/277 (61.01%), Query Frame = 1 
Query:    1 GAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDG-RRFVALEYLSGGTLSSLL---------------REHREKP---MGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREVAGILKV 774
            GAMC  Y+A L+G KV +K P  D    AVA +DLEVE+ +LK + H +I+ L+GAG       RF+ LE+L  GTL+  L               R+ R K      +  +L+ S+ L  ALE+LH   +P   + HRDLKPDN+GF  DGTLKL DFGL +++KR+ RV A +Y MTG TGS+RYMAPE+ +   YNEK DVY+F L++WEML   + F G+   DFY RVV+ G RP L   WPQ +R L+  CW  ++D R +FR +A  L+ 
Sbjct:    4 GAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLH-YHMPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNA-RYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRT 278
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: A0A7S2E226_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E226_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.110e-68
Identity = 116/257 (45.14%), Postives = 167/257 (64.98%), Query Frame = 1 
Query:   19 YTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLL-----------REHREKPMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREV 756
            +TA+LNG+ VV+KT  P+    A+A N++E+E+ +  +L H  I  L+GAG    G RF+ LE L GGTLS +L           R  R+K     +VL  +  + +AL+Y H +A+PG +  HRDLKPDNIGFA DGT+K++DFGL +I+K       E Y M+G TGSLRYMAPE+A    YN+K DVYSF +I+WE+ A  KP+ G+ + +FY RVV+  ERP ++ +WP+ +  L++ CW +++D R SFR +
Sbjct:  410 HTAVLNGRAVVVKTLKPECQDVALAINEIELELDIHSKLDHPFICGLVGAGTTSKGVRFIVLERLDGGTLSQMLGYDNRIRDRRRRFWRKKQFAYVEVLKFARCIADALDYCHRLAIPGAMCLHRDLKPDNIGFAIDGTVKILDFGLARIVKYSDLNSNEVYQMSGQTGSLRYMAPEVAKCLPYNQKADVYSFGIILWELNAYKKPYDGMNKEEFYERVVEGNERPMINKKWPEELVQLMQDCWSSDMDVRPSFRVI 666
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: A0A7S2LY51_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY51_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.370e-68
Identity = 121/262 (46.18%), Postives = 170/262 (64.89%), Query Frame = 1 
Query:   19 YTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLL------REHR-----EKPMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLH-PEWPQPVRHLLESCWRTNLDERLSFREVAGIL 768
            +TA+L G+ VV+KT  P+    A+A N++E E+ +   L H NIV L+GAGF P G RFV LE L GGTL+ LL      R+ R     +K +    VL  + +L  AL Y H  A+P  +V HRDLKPDN+GF  DGT+KLIDFGL + ++    +  + Y M+G TGSLRYMAPE+AD Q YN+K DVYSF +I+WE++A  KP+ G+ R +FY+RVV  GERP ++  +WP  +  L+++CW T++ +R  F ++   L
Sbjct:  504 HTAVLQGKSVVVKTLKPECQDVALAINEIEGELEIHSRLDHPNIVKLIGAGFTPRGVRFVVLERLDGGTLTQLLGYDTRIRDRRRRFWAKKKISYMDVLKCARSLAEALAYCHGRAIPNAMVLHRDLKPDNVGFTLDGTVKLIDFGLARTVENA-TISNDVYEMSGETGSLRYMAPEVADCQPYNQKADVYSFGIILWELVANKKPYDGMNRDEFYSRVVHGGERPVINNKKWPVDLIELMKNCWDTDIAKRPDFADIVDAL 764
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.970e-68
Identity = 118/257 (45.91%), Postives = 159/257 (61.87%), Query Frame = 1 
Query:   19 YTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLL-----------REHREKPMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREV 756
            +TA+ NG+ VV+KT  P+     VA N++E E+ +   L+H N+V L+GAG    G RFV LE L GG+L+ LL           R  ++K +    VL  + ++ +A+ Y H+ AVPG  V HRDLKPDNIGFA DGTLK+ DFGL ++++       EKY M+G TGSLRYMAPE+A    YN K DVYSF +I+WEM AG KPF    R  FY+ V+  GER   + +WP+ +  L+ +CW  N D R SF E+
Sbjct:  218 HTAIFNGKPVVVKTLKPECQDVVVAINEIESEVAIHARLNHLNVVELIGAGTTSKGVRFVVLERLDGGSLTQLLGYDTRIRDRRRRFWKKKSIAYVDVLRYARSIASAMRYCHEDAVPGSTVLHRDLKPDNIGFALDGTLKVFDFGLARLLENSNAKTDEKYSMSGETGSLRYMAPEVARSFPYNYKADVYSFGVILWEMNAGKKPFADYDRDTFYDSVIHGGERMKCNKKWPEELSDLITACWHENPDLRPSFAEI 474
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Match: K0R303_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R303_THAOC)

HSP 1 Score: 234 bits (597), Expect = 2.010e-68
Identity = 117/261 (44.83%), Postives = 168/261 (64.37%), Query Frame = 1 
Query:   19 YTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLL------REHR-----EKPMGISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPFLGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREVAGIL 768
            +TA+  G+ VV+KT  P+    A+A  ++E E+ +   L H NI  L+GAGF P G RF+ LE L GGT+S LL      R+ R     +K +   +VL  S  L  +L Y H  A+P  +V HRDLKPDNIGFA DG L+L DFGL +I++    +  + Y+M+G TGSLRYMAPE+AD + YN+K DVYSF +I+WE++A  KP+ G+ R +FY+RVV  GERP ++ +WP  +  L++SCW     +R++F ++  I+
Sbjct:  462 HTAVFQGKSVVVKTIKPECQDVALAIKEIESELEIHSRLDHPNICKLVGAGFTPRGIRFIVLERLDGGTMSQLLGYDNRIRDRRRRFWNKKKLSYMEVLQCSRDLAESLAYCHGRAIPNAMVMHRDLKPDNIGFALDGKLQLFDFGLARIVENA-SISNDVYNMSGETGSLRYMAPEVADCRPYNQKADVYSFGIILWELVAFKKPYDGMNREEFYSRVVHGGERPAINKKWPDDLVQLMKSCWDAESSQRINFVDIVDII 721
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12682.2049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJM0_ECTSI4.960e-17998.45Serine/threonine-protein kinase CTR1 n=1 Tax=Ectoc... [more]
A0A6H5JJI7_9PHAE7.440e-17998.45Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2LC32_9STRA1.440e-7647.86Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A6H5LAW2_9PHAE9.020e-7244.26Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6V2JN82_9STRA1.800e-6945.14Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]
D7FS28_ECTSI2.770e-6945.49Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2E226_9STRA1.110e-6845.14Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A7S2LY51_9STRA1.370e-6846.18Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7R9WTW5_9STRA1.970e-6845.91Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
K0R303_THAOC2.010e-6844.83Protein kinase domain-containing protein n=1 Tax=T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12682contigE-fasciculatus_F_contig12682:297..3898 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.0
Seed ortholog evalue4.1e-59
Seed eggNOG ortholog159749.K0R303
KEGG koko:K14304
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
EggNOG free text desc.Protein tyrosine kinase
EggNOG OGs2XD1E@2836,COG0515@1,KOG0192@2759
COG Functional cat.T
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Exons6
Model size792
Cds size786
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927775.582136-UTR-E-fasciculatus_F_contig12682:296..3021622927775.582136-UTR-E-fasciculatus_F_contig12682:296..302Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12682 297..302 +
1695995688.8421404-UTR-E-fasciculatus_F_contig12682:296..3021695995688.8421404-UTR-E-fasciculatus_F_contig12682:296..302Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12682 297..302 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927775.5951931-CDS-E-fasciculatus_F_contig12682:302..4041622927775.5951931-CDS-E-fasciculatus_F_contig12682:302..404Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 303..404 +
1695995688.861492-CDS-E-fasciculatus_F_contig12682:302..4041695995688.861492-CDS-E-fasciculatus_F_contig12682:302..404Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 303..404 +
1622927775.6086154-CDS-E-fasciculatus_F_contig12682:529..6251622927775.6086154-CDS-E-fasciculatus_F_contig12682:529..625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 530..625 +
1695995688.8723023-CDS-E-fasciculatus_F_contig12682:529..6251695995688.8723023-CDS-E-fasciculatus_F_contig12682:529..625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 530..625 +
1622927775.622928-CDS-E-fasciculatus_F_contig12682:1325..13971622927775.622928-CDS-E-fasciculatus_F_contig12682:1325..1397Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 1326..1397 +
1695995688.8824499-CDS-E-fasciculatus_F_contig12682:1325..13971695995688.8824499-CDS-E-fasciculatus_F_contig12682:1325..1397Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 1326..1397 +
1622927775.6353948-CDS-E-fasciculatus_F_contig12682:2283..24391622927775.6353948-CDS-E-fasciculatus_F_contig12682:2283..2439Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 2284..2439 +
1695995688.8933153-CDS-E-fasciculatus_F_contig12682:2283..24391695995688.8933153-CDS-E-fasciculatus_F_contig12682:2283..2439Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 2284..2439 +
1622927775.6468763-CDS-E-fasciculatus_F_contig12682:2875..30531622927775.6468763-CDS-E-fasciculatus_F_contig12682:2875..3053Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 2876..3053 +
1695995688.902369-CDS-E-fasciculatus_F_contig12682:2875..30531695995688.902369-CDS-E-fasciculatus_F_contig12682:2875..3053Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 2876..3053 +
1622927775.6566377-CDS-E-fasciculatus_F_contig12682:3716..38981622927775.6566377-CDS-E-fasciculatus_F_contig12682:3716..3898Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 3717..3898 +
1695995688.9104123-CDS-E-fasciculatus_F_contig12682:3716..38981695995688.9104123-CDS-E-fasciculatus_F_contig12682:3716..3898Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12682 3717..3898 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12682.2049.1prot_E-fasciculatus_F_contig12682.2049.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12682 303..3898 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12682.2049.1

>prot_E-fasciculatus_F_contig12682.2049.1 ID=prot_E-fasciculatus_F_contig12682.2049.1|Name=mRNA_E-fasciculatus_F_contig12682.2049.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=262bp
MCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVS
LLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPMGISKVLDLSLALCN
ALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRV
RAEKYHMTGGTGSLRYMAPEIADHQEYNEKGDVYSFSLIMWEMLAGTKPF
LGLKRPDFYNRVVDEGERPPLHPEWPQPVRHLLESCWRTNLDERLSFREV
AGILKVRARGT*
back to top

mRNA from alignment at E-fasciculatus_F_contig12682:297..3898+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12682.2049.1 ID=mRNA_E-fasciculatus_F_contig12682.2049.1|Name=mRNA_E-fasciculatus_F_contig12682.2049.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3602bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12682:297..3898+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGCAATGTGCGTGGCGTATACAGCCCTACTGAACGGGCAGAAGGTGGT
GCTCAAAACCCCGCTGCCGGACACTAGCCACGCGGCGGTCGCCGCCAACG
ATTTAGAGGTACGATGCTTGCACACCAGAGGGTGCGTTGTTGTTGATTTT
CTGTACCTTAGATTGTGTCAATGCGGTAGTTGATGGTATCCTGAATGCTG
CTGGTTCTTTCGCTGTTGTTTGTTCCCTATTAGGTGGAAATGCTCCTGCT
GAAGGAGCTCCACCACGACAACATTGTGAGCCTGCTGGGAGCGGGTTTCC
TACCAGATGGCCGGCGTTTCGTTGCGCTGGTGAGTGTCGGCTGTCGGCGT
CTTAGCCCCCCTTGCTGTCGCCAGCCCCGTGCTTTCCTGGAGGCATGGGT
TTCGATCTCTTCCAGTCCGTTTCCCTGTTATGTCTTTTGATTGGAGGATT
CGTATTTCAAAGAGGGCCCACATGCTGTACGCCGTGGACCACCAATGCAT
CGCCGGTAAACGTCCAAACCAACGGCGTCTGAAACTATTGCACGTGTAAG
GGGGCAGGTTTCTCGTCGGCATCTGGCGAAGCTTATGTGCCATCTGATTT
GTGACGCGAAGGAACGGGCAGCGGCATCGATCGGGGCTGTAACCCGCCTG
GCCTCGGGGTCGTGTAGCGTGACGGGACGCTGCTCCATGTAGCATAGAAA
ACATGGCAATTCATTCGTGTTGGCGTATCCGAGTGCCGAACGCACTGCTT
GGCAGATCAATCGCCGGACCTGTTTCCTGCCGTGAGATATACAGGAAACA
CGTACATGCTCAATCGGCACGCGTACCCCCCCCCCCCCCCGGCATCCTAT
CGGATAACTGGTCCTATTGCTCTGGCGGATTGCAATCACCAACTCGCAAA
AAAGCTTCAAACGAAAACACCCTAAATGCCCCGCATGATGCGTTTGTCTG
CTGTTCCCTCCGGACTGGGTGGGTTCGGCGGTTATTGAACATCGGCGCTT
GGCTCGAACACACCGGCTTGGCTTGGCAGGAGTACTTGAGCGGCGGGACT
TTGAGCTCTCTGTTGAGAGAGCACAGGGAGAAGCCCATGGGGATTTCCAA
GGTGCGTTCCGGCGTGGTGTTGGGATGGGGTGCGTCTCTCTCGCGTTCGA
GCGGCGTATGCATAGATCTGTTCCGTATTCCTTGTTACACTAACACTGCT
ATACAGCACAAACAGCGGTGTTACTTTTGTATTTTCTCTAGGGACACACG
TGTGCACACCCGTCCGGGATATGTTATTTATTTTTTTATTTTCTCCTGGT
TTTAGGGTTTGATAGTATAGGTAAGTTTGGTGGGCACTTGCCAACGTGCA
CGGTGGTTATCGCACCCTTGTATTCTCTTCTTCTCTTTCAACAAATGCTG
CTTGAGCGCGTGTGTGTATTCAACAGCACACCTCTACTCCCACGATGCCA
GTGGGCTACAACTCTTTCCCGTTAGCCAGATCAACGCCACACTACAGCAG
TTGTCTGGGTGCTGTCCAGTCTGTTCGGTCCCGTTTCCGCGAACCCATCC
TGGGGCAAGACAGGCCCGTGTCCTTCTCCACGTCAATACTGTAACGAGAA
CCAACCGTATCGAATAGCGGCTTTGAATGCTTATAGAGCGATTGCTCATT
GGCACGTGTGGTACACCCTTTACGGGACCCGCTCGCTGGCGCTCGTCAGG
GAAAGCTGACTTCCCGAGGCCAGTCGGGGCGCGTTGGCTACCAGCTCTTG
ATGAGTCTCTCAAACTACGCAAAGAATCGTCTTGGCATCGCTGGAAGCGG
GTCGGTAGAAACCGTCATCAGGTGTCTTGTCTGAACCTCTGTCCCCACCC
TCGCATGTGTTCGTTCATGCAGAACAAAATTGATCTGATAATACCAACAA
CAAAAAAACTGATAATACCAACAACAAAAAAACTGATAATACCAACAACA
AAAAAACTGATAATAACAACCTACAAATAATAAACAGGTTCTCGACTTGT
CGCTGGCGTTGTGCAACGCTTTGGAGTACCTCCACGATGTGGCGGTGCCC
GGGCGCATCGTGTGTCACCGAGATCTCAAGCCGGACAACATCGGTTTCGC
GCAGGACGGCACGTTGAAGCTCATTGACTTCGGACTGGGAAAGGTAACCA
CACAACTTGTTGGTATCTATCTAAATGTAAATATCTAAATGTAACATGTA
ACCGAGCGGCACCGTCATTGACTATCCTACGGTAACATTTTGTGTCCTTT
GGGTGGTAGTAATAAGGAGAGCCACGGCATTGGATGAGGTATTCCGCCAG
TGGCCTTGTACCCCGTTTGTACCCTATGGGTGACGACTAGAAGCCGAGGC
ATTGGATAAGGGGGTGTACCCTATACATGTATGAGCGACGCCACGAAGGA
GAAGCCAAGGCATTGCATTGGATGACGTTTCCGTCAGTACGTAAGGGACC
TACCCTAGGTTTGACTTGACGACCATAAGAAGCTGGCAAGGCATTGGATA
AAGAAGTTGGCTTCTTGGCACGGAGCCGTGACTTGTGCGCCATCCGGTTG
TCTATTGTCCGCGACGTGACTTGGTGCAGATCATCAAGCGCAAGTTCCGC
GTGAGGGCGGAGAAGTACCACATGACCGGCGGCACCGGGAGCCTGAGGTA
CATGGCACCGGAGATCGCGGACCACCAGGAGTACAACGAGAAGGGCGATG
TCTACAGCTTCAGCCTCATTATGTGGGAGATGCTCGCGGGAACCAAGCCG
TTCCTAGGTGAGTTTTGCTACTGGCAGTGTTGCGCAACGCCAGATCTGAG
GCAGAGAAATGTGCAGATGGGGCGAGAATATGATCTGATTGGAGGAGTCA
AGACGAGATGAGATAAGGTAAGCATTTGGTGCGATGTAGAATATGATGGA
GGACCCAGCGAAGGTGAAGGTATGTGAATTTCAACACTGGAGACTGAAGG
AACGGGAGCACACTTGATGGGAAAAGGGGCAAGGGGTTGGGTGAAGTGAG
AGATGGAAGCCGGGGGGCGCAAGGAGAGGTATCAAAGGTGCAAGACGCAA
GAGATGGGAAAGAGGCGGGCAAGGCGGGAGGGGTGTGTGAAGAGAGGAGG
GAGGAGGGGCCTCACCCACCGATCACGCATTCAGGACGAACACGCCACGC
ACAGGGCGCAAACGTATAGCTTATATTGTAGACGAGGCAGGCCGATTGCG
TGCGGTTCACACGGAAGATATAGCAGCAGCAGCAGCAGGCGTTTTGGTTG
AGCTTCCTTCCTGTGTGTTTCTCGCCCTAAATAATAATTTGGCTCGCGCA
CGACGTGGCACCACCATGAGTCGCCTGTCCCCCCCTCGTCTCATCTGGTC
AAACGCCACCAACAAAACCATCCACCACCATGAACAAAAAACTAAAAAAC
TAAAAAACTAAATAAAACAGGGTTGAAGCGGCCGGATTTCTACAACCGTG
TGGTTGACGAGGGGGAGAGGCCTCCCCTGCACCCGGAGTGGCCGCAGCCC
GTGAGACATCTGCTCGAGAGCTGCTGGCGAACCAACCTCGACGAGCGCCT
CAGCTTCAGAGAAGTCGCGGGCATCCTGAAGGTGCGTGCGAGGGGGACAT
GA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12682:297..3898+

>mRNA_E-fasciculatus_F_contig12682.2049.1 ID=mRNA_E-fasciculatus_F_contig12682.2049.1|Name=mRNA_E-fasciculatus_F_contig12682.2049.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12682:297..3898+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTGCGTGGCGTATACAGCCCTACTGAACGGGCAGAAGGTGGTGCTCAA
AACCCCGCTGCCGGACACTAGCCACGCGGCGGTCGCCGCCAACGATTTAG
AGATGTGCGTGGCGTATACAGCCCTACTGAACGGGCAGAAGGTGGTGCTC
AAAACCCCGCTGCCGGACACTAGCCACGCGGCGGTCGCCGCCAACGATTT
AGAGGTGGAAATGCTCCTGCTGAAGGAGCTCCACCACGACAACATTGTGA
GCCTGCTGGGAGCGGGTTTCCTACCAGATGGCCGGCGTTTCGTTGCGCTG
GTGGAAATGCTCCTGCTGAAGGAGCTCCACCACGACAACATTGTGAGCCT
GCTGGGAGCGGGTTTCCTACCAGATGGCCGGCGTTTCGTTGCGCTGGAGT
ACTTGAGCGGCGGGACTTTGAGCTCTCTGTTGAGAGAGCACAGGGAGAAG
CCCATGGGGATTTCCAAGGAGTACTTGAGCGGCGGGACTTTGAGCTCTCT
GTTGAGAGAGCACAGGGAGAAGCCCATGGGGATTTCCAAGGTTCTCGACT
TGTCGCTGGCGTTGTGCAACGCTTTGGAGTACCTCCACGATGTGGCGGTG
CCCGGGCGCATCGTGTGTCACCGAGATCTCAAGCCGGACAACATCGGTTT
CGCGCAGGACGGCACGTTGAAGCTCATTGACTTCGGACTGGGAAAGGTTC
TCGACTTGTCGCTGGCGTTGTGCAACGCTTTGGAGTACCTCCACGATGTG
GCGGTGCCCGGGCGCATCGTGTGTCACCGAGATCTCAAGCCGGACAACAT
CGGTTTCGCGCAGGACGGCACGTTGAAGCTCATTGACTTCGGACTGGGAA
AGATCATCAAGCGCAAGTTCCGCGTGAGGGCGGAGAAGTACCACATGACC
GGCGGCACCGGGAGCCTGAGGTACATGGCACCGGAGATCGCGGACCACCA
GGAGTACAACGAGAAGGGCGATGTCTACAGCTTCAGCCTCATTATGTGGG
AGATGCTCGCGGGAACCAAGCCGTTCCTAGATCATCAAGCGCAAGTTCCG
CGTGAGGGCGGAGAAGTACCACATGACCGGCGGCACCGGGAGCCTGAGGT
ACATGGCACCGGAGATCGCGGACCACCAGGAGTACAACGAGAAGGGCGAT
GTCTACAGCTTCAGCCTCATTATGTGGGAGATGCTCGCGGGAACCAAGCC
GTTCCTAGGGTTGAAGCGGCCGGATTTCTACAACCGTGTGGTTGACGAGG
GGGAGAGGCCTCCCCTGCACCCGGAGTGGCCGCAGCCCGTGAGACATCTG
CTCGAGAGCTGCTGGCGAACCAACCTCGACGAGCGCCTCAGCTTCAGAGA
AGTCGCGGGCATCCTGAAGGTGCGTGCGAGGGGGACATGAGGTTGAAGCG
GCCGGATTTCTACAACCGTGTGGTTGACGAGGGGGAGAGGCCTCCCCTGC
ACCCGGAGTGGCCGCAGCCCGTGAGACATCTGCTCGAGAGCTGCTGGCGA
ACCAACCTCGACGAGCGCCTCAGCTTCAGAGAAGTCGCGGGCATCCTGAA
GGTGCGTGCGAGGGGGACATGA
back to top