|
|
Homology
BLAST of mRNA_E-fasciculatus_F_contig1268.2046.1 vs. uniprot
Match: D8LQM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQM8_ECTSI) HSP 1 Score: 728 bits (1878), Expect = 2.880e-251 Identity = 375/459 (81.70%), Postives = 394/459 (85.84%), Query Frame = 2
Query: 269 GTVVLHLTVADMAQLVGTNKEMNTSALDSPEFWRERCCGTFGRHVDYIESVGKSEFLAFHMAKKLVLSGESKTNSNSRLPETEAFNRSVWTRQLLSFSVGASSQDRNDEGPSHTLFESRCARMLEDRRCGSMPREAMASIGKRCQGDCGCVWLDKCYWTSEPSPTADKEEWLEYDMQENTVAVVFSFMLTPYTSFWQPEQPTYNPIEACFELTHPQIDGGKTPYYESPRFDVHPRMKRQQFNLPHPIVSFGGRVRIRLLGMAQRKTLPESMGDTANHYHTCISYAALCGSFLLSCSIADHPDGPASRSAKIPPVRGGSVATIGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRWAVLVHVYPVNQPENAAALDQSGEKKKPLKVKVFSDTPCLDLLELYSKMYFPDEKRTRLVLTGPGGMDLPAEDGNLVGDFAVQGKLSLVDPSRQ 1645
GTVVL+LTVADMAQL+GTNKEMNTSALDSPEFWRERCCGTFGRHVDYIESVGK+EFLAFHMAK L+L GESKTNS RLP TEAF RSVWTRQLLSFSVGASSQDRNDEGPSHTLFESRCARMLED RCG MPREA+ASIGKRCQ DCGCVWLDKCYW+SEPSPTADKEEWL+YDMQENTVAV SFMLTPYTSFWQPEQPTYNPIEACF+L HPQIDGGKTPYYESPRF V P MKRQQFNLP PIVSFGGRVRIRLLGMAQR+TLPES+G TANHYHTCISYAALCG+FLLSCSIA+HPDGPASRSAKIPPV ATIG G XXXXXXXX MRWAVLVHVYP N+ +N AALD +GEKK PLKVKVF DTPCL+LLELYSKMYFPDE+R RLVL G GM+LPAEDG LVG+FAV GKLSLVDPSRQ
Sbjct: 16 GTVVLYLTVADMAQLIGTNKEMNTSALDSPEFWRERCCGTFGRHVDYIESVGKNEFLAFHMAKVLMLPGESKTNS--RLPGTEAFERSVWTRQLLSFSVGASSQDRNDEGPSHTLFESRCARMLEDMRCGKMPREAVASIGKRCQSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAVAVSFMLTPYTSFWQPEQPTYNPIEACFQLMHPQIDGGKTPYYESPRFFVDPHMKRQQFNLPRPIVSFGGRVRIRLLGMAQRQTLPESVGATANHYHTCISYAALCGTFLLSCSIANHPDGPASRSAKIPPV-----ATIGKGRGXXXXXXXXEDVDQGGGATSPINRIEKNNDKLR----MRWAVLVHVYPANKSDNEAALDNNGEKK-PLKVKVFGDTPCLELLELYSKMYFPDEERARLVLAG--GMELPAEDGKLVGEFAVHGKLSLVDPSRQ 460
BLAST of mRNA_E-fasciculatus_F_contig1268.2046.1 vs. uniprot
Match: A0A6H5L798_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L798_9PHAE) HSP 1 Score: 408 bits (1049), Expect = 4.200e-131 Identity = 194/223 (87.00%), Postives = 205/223 (91.93%), Query Frame = 2
Query: 272 TVVLHLTVADMAQLVGTNKEMNTSALDSPEFWRERCCGTFGRHVDYIESVGKSEFLAFHMAKKLVLSGESKTNSNSRLPETEAFNRSVWTRQLLSFSVGASSQDRNDEGPSHTLFESRCARMLEDRRCGSMPREAMASIGKRCQGDCGCVWLDKCYWTSEPSPTADKEEWLEYDMQENTVAVVFSFMLTPYTSFWQPEQPTYNPIEACFELTHPQIDGGKTPY 940
TVVL+LTVADMAQL+GTNKEMNTSALDSPEFWRERCCGTFGRHVD+IESVGK+EF AFHMAK L+L GESKTNS L TEAF R VWTRQLLS SVGASSQDRNDEGPSHTLFESRCARML+D C MPREA+ASIGKRCQ DCGCVWLDKCYW+SEPSPTADKEEWL+YDMQENTVAVV SFMLTPYTSFWQPEQPTYNPIEACF+L HPQ+DGGKTPY
Sbjct: 17 TVVLYLTVADMAQLIGTNKEMNTSALDSPEFWRERCCGTFGRHVDHIESVGKNEFRAFHMAKMLMLPGESKTNS--WLSGTEAFERDVWTRQLLSSSVGASSQDRNDEGPSHTLFESRCARMLQDMPCERMPREALASIGKRCQSDCGCVWLDKCYWSSEPSPTADKEEWLDYDMQENTVAVVVSFMLTPYTSFWQPEQPTYNPIEACFQLMHPQVDGGKTPY 237
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 102.1 |
| Seed ortholog evalue | 8.1e-19 |
| Seed eggNOG ortholog | 115417.EPrPW00000021353 |
| EggNOG free text desc. | F-box protein. Source PGD |
| EggNOG OGs | 1MBKR@121069,28J3Z@1,2QRFZ@2759 |
| COG Functional cat. | S |
| Best tax level | Pythiales |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-10_006260.1 |
| Exons | 7 |
| Model size | 3497 |
| Cds size | 1524 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1268.2046.1 >prot_E-fasciculatus_F_contig1268.2046.1 ID=prot_E-fasciculatus_F_contig1268.2046.1|Name=mRNA_E-fasciculatus_F_contig1268.2046.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=508bp
MSAPNDAAAAAAAVSATSGVEGTTTTTTTTIVRLAPTATFSTLPLGPLGT
VVLHLTVADMAQLVGTNKEMNTSALDSPEFWRERCCGTFGRHVDYIESVG
KSEFLAFHMAKKLVLSGESKTNSNSRLPETEAFNRSVWTRQLLSFSVGAS
SQDRNDEGPSHTLFESRCARMLEDRRCGSMPREAMASIGKRCQGDCGCVW
LDKCYWTSEPSPTADKEEWLEYDMQENTVAVVFSFMLTPYTSFWQPEQPT
YNPIEACFELTHPQIDGGKTPYYESPRFDVHPRMKRQQFNLPHPIVSFGG
RVRIRLLGMAQRKTLPESMGDTANHYHTCISYAALCGSFLLSCSIADHPD
GPASRSAKIPPVRGGSVATIGTGRGGGGKGGGGGEDVDQGGGATSTSKKT
KTNDNDNDKLRMRWAVLVHVYPVNQPENAAALDQSGEKKKPLKVKVFSDT
PCLDLLELYSKMYFPDEKRTRLVLTGPGGMDLPAEDGNLVGDFAVQGKLS
LVDPSRQ* back to topmRNA from alignment at E-fasciculatus_F_contig1268:3484..11237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1268.2046.1 ID=mRNA_E-fasciculatus_F_contig1268.2046.1|Name=mRNA_E-fasciculatus_F_contig1268.2046.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7754bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1268:3484..11237+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCAAGTTTCAGTGCCAACTCCTGCCCAACATCAGATCTTGAGCCATCTG
TGCTGTCTATCCGGATTGGATTCTCTCACGCCGAAGACCAGCTACTATAC
TACACTAATCTAACTCGCCCCAGGTACGCTCGGTTTTTGAACACGAAAGC
GGTACAATGTCTTGCTGCTTGTAGAGGGAGAGAGGGGAGAGGGGAAAAGA
GCTCCTCAAAGGTCACTGCTGCCCGCACCTGTTTCGCTCTGGTCTCCGCG
GCTCAGGTTCAGCTCTGACCCACAGCAGTATGAATGGCGGGATTGCGCAC
CGCCGTGTGTCCACGTTTGGTGCATTCATACTAGACTAGTGCTACACTAC
TGTGTTCATACTCGTACTGCTTGCGCACACATCGTGCTCAGCAGCTGCAA
TTTGTACCGGTCACAGCCAGAGGTAGAGTTTGTAACGCTACACACGATAC
AGCAGTCAGCAGTTAGCAGTATCTAATGCCAGTGTGGCTGTAGTGGAAGG
CACGAGGAAAGAACCGACGCTCGGTCTGCTATTTTTCAGCTGTTCCAATA
GAATAGTTCAACAGACCGGCCCTTGATCGTGTTTTTTCGCCTTCTCTCTG
CTCCAGTGCAAGGTTGACGTTTGAAGAAGTGGAGCCGATTTTAAACCCGA
TTACCCCACACATAATGCGGAATTTGTGTAACCGCCGCACGCAACGTCCT
CGAAGAACTAAGTACCAAGTATCATATGCATACATAGACTGGATGCTGCT
GTTGTTTGCCATGTGCATATGCATAGCAACATCAGTCTGCACATGATACA
TGATGCATGGAATGGATGGTACAGCACCAGAGATGAGCGCGAGGCAGCTC
GGCTCTTCCGCAACGAGGACTCTGTCTAAAGCATGGGCTGTATTAGAACG
TGGAACATTAGAACAGCCTGACAAGCCCCGCAAACGCTTCCTCCCCTCCC
TTGCTTCTTACCCGCCCACAGGATGTCTGCCCCCAATGATGCTGCTGCTG
CTGCTGCTGCGGTTAGCGCTACCTCTGGAGTTGAAGGCACCACCACCACC
ACCACCACCACTATCGTGAGACTTGCGCCAACGGCAACATTTTCGACGCT
TCCGCTGGGTCCGCTGGGCACGGTGGTGCTGCACTTGACTGTGGCCGACA
TGGCGCAGCTGGTCGGGACGAACAAGGAGATGAACACGAGCGCCCTTGAT
TCGCCCGAGTTCTGGCGGGAGCGTTGTTGCGGCACGTTCGGTCGTCACGT
CGACTACATCGAGGTACAGTTCATACACATCGGCTGTGTAGTTATATCAC
AACAAATCCATCTCTACCCGTGGGTCTAGGATTAAATAGCAATGAGTTAG
TGGCGTTAGCGGAGCACTACAATACAGTACCTGTGTTACTAGCATTCCCC
GAGCTGCATACAGTATGTAGTACAACGATATGTTTGTGAGCCTCTTACTA
TTATAACACAACACGTGTCTTGTTCTTTTTCATCGGCCAAGCGGAAACGG
TGCTCTACGATGCTCTCGTGAGGCCTAGCGTTGCTTTCTCTGGCTGGAAA
GCCGGTCGGGTCGCCCCTGTCCTCCGGCTTGCATACTCCGCATGGATGTA
TCGTGTCCGCTCACCTACTCACTCTTGCCCCTATTGTGGGTAACTCTATT
TAGTTTCGTCAACACTTAACCTCTACACGGCACGACCGGTATTTTTTCGC
TCGACGTGGAATTTCTCGGAAAGGGGCGTCGTTGGGTTTTGCATAGAATC
GTTGCTATGGTGAAACGGCGACCGGTTGGGCAAGTCGACCGAAGCAATAC
ACGTCATTTTTTCATTTAGTGACGTGTGGCGATCCGTTTCTCATTCGCTG
CCGCTGGCACACCGTTGGGATGTTGGGATGGATCTCTTGGTTCTACGATA
CGATACGACGCAACTGCTGACTGCTACCGACTGCTGGTGCATTCCGTTGA
TTGCCCATGTAAAACTCCCCCCCCCACCCCCTCCCTCCCTCCCTCTCTCT
CTTTCTCTCATTGATGGAATAATCCAGTCGGTTGGCAAGAGCGAATTTCT
AGCGTTCCACATGGCAAAGAAGCTGGTGCTGTCAGGCGAGTCGAAAACCA
ACTCGAACTCGCGGTTGCCGGAAACGGAAGCATTCAATCGATCCGTGTGG
ACGCGTCAGCTGCTGAGTTTTTCCGTGGGCGCGTCGAGCCAAGACAGAAA
CGACGAGGTGAGGTGTGAGGTGCAGTATTCTACTTGTTAGCGATGAGACC
GAGTATTACAGTAGACAGACGGCATTGTGTGAGAGAGAGTGCAACATGTT
GGTGATGTGAGCATTCTTACAGCAGTACTATCCCTCTCTGGTCTGGTTTG
TTTCCTCCAAGTGGTGGCATCGGTATTGTGGTCTGTCTGGGGTGGTTGGT
TGATGCCATGGACACACGGACTTTTCTTGTACCTTGGCGCAGCGCAGCAG
CGTTTGTGGGACATCGGTGGCTGTTCAGACGCTGGTCATCCGTCTCCTTT
GGTTGACGTTTTTGTTCTCTCCCTCTGCCCCGCTCTCTCTCTCTCTCTCG
TTTCTTTTTTGCTGACTCCGGTCGGAAAGGGCCCGTCTCACACGCTATTC
GAGTCGCGTTGTGCGAGGATGCTCGAGGACAGGCGCTGTGGGAGTATGCC
CCGGGAGGCGATGGCTTCGATCGGGAAGCGATGCCAGGGCGATTGGTAGG
TCTCAGGTCTCAGGCCTGGTCGATGGGGAACTCCAGTACCCAATTGGAAG
TGTGTTGGGTGCGTTTTTTTTGGGTGTTGCAAGGTATTGGGTGCTTGTTC
GTTTTTGGTTATGGAGACGCAATATGATAAAGCCACTTCACAATCGCAGC
AATAGCACACACGTGTCTGCCAGGACTTTTAGTATGTTGTTCTTGAAGCG
GTACCGTAGTTGTTCGAGTAGTCGCACCCCCCTCAGACCGACTTCCTTCA
TACAGTACCAGTAGCTCGATCGATTGCTCCACCATCAAGAGGGAGGGTGC
TATCGAAAACCGACCGACAGATCCAAGCAAAGCTCTCGACGAGACCTTTC
CTTTCCGAAACCATTCGTTCCGCGGGCAGTGGTGCACCCTCTTGGTCCTC
TTGGGGGTGGAGCAATGGAGCTAGCTACAATAGGAAAGAAAGTCGGTGTC
AGGGGGGTTCGAGCACCACTATAGTACCGTCGCGCAAGTACGGTCTGTAT
AGTACCATCATTTCAGGTGTTGGCGATTCGTCTGCACCTTCCTTCTTCTG
AAATGAGGCGTCTGCATGCTGACATTGGTTGCCTGCATACTCGATCAGTT
AACAAGGCACGTGGTATGCATACAGTTAGTACCGTTTGCGAAACGTGAAA
CATTTTCTTCCCATCACATGTCGATACAGTATTGATGGATTTTTGCCATA
AACAATGTACAATAGTTCCAATACGCTTGAGGAGGATTTCGTTTCGGGCA
GGGCGCCATGCGATTCCTGTCTGCAGCTGCCCTTATTCAGCGGTGCCGGC
CACCCGTGTTAACTTGGTTTGGAGTTTGAGCGTGGAATGTACACGACATC
GTTGCACCGGTTGCTTTGCTCGCACGCATGCGGGCTAATCTATTCTAATC
TGCTGGTTTCTTGGTGGGCGCTCTACATCTTTCATTCTTGCTTTCTTGCT
TTCTTTCTCTCTCTACCAAAGCGGGTGCGTGTGGCTCGACAAGTGCTACT
GGACTAGCGAGCCGTCACCCACTGCAGACAAGGAAGAGTGGCTTGAGTAC
GACATGGTGAGTGAGACAATGTTGACGTTGACTTCACATTGGATAGCATC
GTGCGATCCAAATTTTATAGAATTGTCTATTTTGGTTCACATGGACCTCG
TGTGATCGGGGATGACCTGCAAAGCCAATGAGATGGATCAACCAAACGCT
CCCGACACGTTTCGCAACATGCCATGGTTTAGCAAAGAACGATGGTGTGT
ATAGTGTATATGCGTATATTCAAAGAAGCGTGATTACCATTTGCGCCTCG
CTCGTTGACCTGCAGCAAAAGCAGCAAAAAATGGCATTTGCCTGAGACAA
CTTGTCCGTAAGACTTGATGCAACGACTGGTGTACATCAGTTGAAGCACG
TAAAATGAAAATTGGTGACCGCGTTTCTTGATCAAGGAAGCCAGGGTATG
GACTCGAATTTCAAGTTGGGAGCGCCTGGTGCCGGCTTTCGGGGGTCCTC
CATAGGGCCCTAAAAAGGCAGTGCGTCCCAGACAACACTAGCGAAAAATC
TTGGTATTCGCAGCACCTGCTCCTCTCATATCTGTCATACGAGTTCAGAG
GATAAGTGCTGCGACCGTAGTGGCAGTTTCTTAGAGGCTGCACAGAGATT
GGGATCAATAGCAGCCTGCCTGCAGCATTCGAACCGGGTTGACAGTAAGG
CGACGTACCCCGCCATACTGGGTTTGTGCGCGTACCGAGGCTTGCTGCGG
CGTACAAGACGAGTATGCTTTTCGCCCATGGCAATACACTGCTGTTGTGT
GGGCAAGAATATACTGAGTACCCCCCCCCCCCCCTTCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCGTTTTGTTTTTGCACCGCTGAACCCCCGCAGCAGG
AGAACACGGTTGCGGTGGTTTTCTCGTTCATGCTGACCCCTTACACGTCC
TTCTGGCAGCCCGAACAGCCTACGTACAACCCAATCGAGGCTTGCTTTGA
GCTGACGCACCCTCAGATCGACGGTGGCAAGACGCCCTACTATGAGAGCC
CTCGTTTCGATGTGCACCCCCGCATGAAGGTTAGTGTACTGTACTGCAGT
AGCTCTCTAACAGCGATGCTGTTTCGAGGATGGCAAGCCCGGCATACATT
GCTCTCCAAGCTACTTTACCGATGAAGCAGGTCTTCGGCCATGCTGGTGT
GACTTGATTTCGGGAAGGGAAGCCATCCGGTGCTAGTGCTGCTGTGTTCC
CCGTGCAAGTGAAGGCCGCATGGTTGATGCACCCCTGCACGTCCATGAGC
CGTTCGCACAGCAGCAGTGCGACGGCTTCCGACTCAGAAAGACTCTACAA
TACAGATAGCAGCTCCAGTGCTCCATTCAGAACGCTACGTGTAGCATTAT
GAGATTCTACTCGGTTGGGGAGGGAGCAGGGACCTCGACTTGTTCGGCAC
GCTAATAATGCGTGACATATCACTGACTTTGCCACACAAGCAATAAAAAA
ATGACCCCCCCGCCCACCCACCCCCTACGTGCGCAGCGCCAGCAGTTTAA
CTTGCCCCATCCGATTGTAAGTTTCGGCGGGCGGGTCAGGATCCGCCTCT
TGGGGATGGCGCAAAGGAAAACCTTGCCGGAGAGCATGGGTGACACAGCC
AACCATTACCACACCTGCATCTCCTACGCGGCGCTGTGCGGGTCCTTCCT
CCTCTCTTGCTCCATTGCCGACCACCCTGATGGCCCGGCAAGCCGGAGCG
CCAAGATTCCTCCCGTCCGCGGGGGCTCTGTTGCTACCATCGGCACAGGA
AGAGGAGGAGGAGGAAAAGGAGGAGGAGGGGGCGAGGATGTCGACCAGGG
AGGAGGAGCGACCAGCACCAGCAAGAAGACCAAGACCAATGACAATGACA
ATGACAAGTTGCGCATGCGGTGGGCCGTGCTTGTGCACGTGTACCCGGTC
AACCAGCCGGAAAACGCGGCAGCCCTCGACCAAAGCGGAGAGAAGAAGAA
GCCACTCAAGGTCAAGGTTTTCAGCGACACTCCCTGCCTTGACCTCCTTG
AGCTTTACTCGAAGATGTACTTTCCCGACGAAAAGCGTACCCGGCTGGTG
CTGACCGGTCCCGGAGGGATGGACCTCCCCGCTGAAGATGGCAACCTGGT
TGGAGATTTCGCCGTCCAAGGCAAGCTGTCCCTTGTAGACCCGTCCCGAC
AGTAGACAGCAGTGGGATCGAAAGAACAAAACTCTGCGAGGGCGTGGAGC
TTTTCGCCGGAACGATGTGCTGTCAGGATCTGATCGAGTTACGGCCAGGC
GTCGGCTTGAGCATTCCATGCACTTTTTTTATAATACACAGCCACCCAAG
TTGGATCGACTGCCTGCTGTCGATATACGTACGTTGTTGGGTTTTTTGTC
CGTACTGTTATGTACTGTATACCTGCGACACAGACGGCGTGCTGTGACTG
ACGTGACGTCACTTACAAGTGGCTGTTTTTTTTTGTTTTTTTTTACTTTG
TGCGTAGCACTGGTGTTGTCTATCACCATTGGCTGCTGTACGATAGAGAG
TGTGCCTGACGATTGTCCGGGCGGCTCGCATAATATTTTGTAGATGGCAT
CGATTCGCTGCTGCTGCCGCTGTGCTCGGGGCCAACAAATTGTGGCACGA
TGCTTGTCATTTTCATCTAGATAAATGTACGGGCCTAGATACAGATATGT
ACGTGAGATAAGGCTGTAATACCGCTAGTGGTGCTGAAGTTGGTGGTCTG
AATGACAGCGAAAGGCTATTGTACTGACAGTGCCTACAGCCCTGTTCAGT
CCGTAAACCGCGAGAACCGGCCGTGTACTTTTGTGGATTTGTTTTTTTTT
GTGTATCACAGACAGCAGTGTTTTCGAATGAGGTTGCGAAGCATGGGCAG
TTCTGCCGTTAGGAGACGGTCTCTCGCTGTTTGAAATCGTGGGGGCCTTC
CTTCCTTCATTTGATGGTTGTTGGTGTTGGCTCTCACGGCGAGACAGCCG
GTCCGGTCACCACAAGTAGAGAGCTTTGGCGGTGAGGTTAGAGGAAACGG
CGGCAATGTATGTGCTGAGTTGACCTCCACACCGAGCAAACAGCACCGTA
CTCTACGTAGCGCCGGCGTGCGTAGCGGTAACCATGGTTGGCTGCTAATG
CCAGGAAGGGAGGAAATGGTCAGCCTCTGTCAGTCACCAACACCAACTCG
ATCGAGGTGCTAACTATCGCGTAACCGACAGACAGACAGACAGACCGATT
GGACCGATTGGATTTGGTCTAATGCCTACTGCGCGCGTTTAGAGATGATC
TTGAGCGGTTCTAGAGGAGGCGGGGGGCTGGGGGGGAGGATCGCGGAGAT
GCTTGCCGGCAGATCGATATCTATCGGCGGCCATCTGCCGTGCTATGCTA
TTTTAGTGTTAGGCTTTTTTTCGAACGGGTACATGGTCTTTCTGTGATCG
TGTGTATTTTTCAAATAACAAGAACTTCACTGCCGAGGGTGAAAAAACGC
TCCGGTACTTGTAGGAAGTTTTGGGGGGGGACGGGAACGTGTGTGAACGC
CGATGGGCTGTGTTTGTTGAGAATATAGTCTAGTTACGAAAAATGTAAAA
TACTTGACAAAGAACGTCAGTCGAGAGAGGAGAGAGGAGAGAGGGGGCAC
TGCGTGTGTCGAAGGCTTAGGCTTTGCAAGGGGGCTCGGTTTTGCCGTAG
AAGGGGGCTGGACATCGTGCGTGTCAAGGGTCCTTGCACCGGTTGATGGG
CTAGTGACGCCCACCGGAGAATGAGAAACTACATACGTTCTGTGTGATGA
TGACGGGGGGTGAGTGTGAGTGTGATGAATTCAGGCGCCATGAGCTGCGG
GAGGGTAGCTTTCGCTAGACAGCGGTACAGTTGTAGCATGTGTTGCGGAG
GTAGTCTAATCAACCAGTAACTCTTCTTGGCGTTGACTTTTCAATTGGAT
CTTTGGCAACATCAAACATCCTGTTGTTTTCTGTCTTCCATGCTGTACCG
AGGATGATTTGATGTGAGATGTATTGGATGGATGAGGCATCTCCTGCACC
GGGC back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1268:3484..11237+ >mRNA_E-fasciculatus_F_contig1268.2046.1 ID=mRNA_E-fasciculatus_F_contig1268.2046.1|Name=mRNA_E-fasciculatus_F_contig1268.2046.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3048bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1268:3484..11237+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCTGCCCCCAATGATGCTGCTGCTGCTGCTGCTGCGGTTAGCGCTAC
CTCTGGAGTTGAAGGCACCACCACCACCACCACCACCACTATCGTGAGAC
TTGCGCCAACGGCAACATTTTCGACGCTTCCGCTGGGTCCGCTGGGCACG
GTGGTGCTGCACTTGACTGTGGCCGACATGGCGCAGCTGGTCGGGACGAA
CAAGGAGATGAACACGAGCGCCCTTGATTCGCCCGAGTTCTGGCGGGAGC
GTTGTTGCGGCACGTTCGGTCGTCACGTCGACTACATCGAGATGTCTGCC
CCCAATGATGCTGCTGCTGCTGCTGCTGCGGTTAGCGCTACCTCTGGAGT
TGAAGGCACCACCACCACCACCACCACCACTATCGTGAGACTTGCGCCAA
CGGCAACATTTTCGACGCTTCCGCTGGGTCCGCTGGGCACGGTGGTGCTG
CACTTGACTGTGGCCGACATGGCGCAGCTGGTCGGGACGAACAAGGAGAT
GAACACGAGCGCCCTTGATTCGCCCGAGTTCTGGCGGGAGCGTTGTTGCG
GCACGTTCGGTCGTCACGTCGACTACATCGAGTCGGTTGGCAAGAGCGAA
TTTCTAGCGTTCCACATGGCAAAGAAGCTGGTGCTGTCAGGCGAGTCGAA
AACCAACTCGAACTCGCGGTTGCCGGAAACGGAAGCATTCAATCGATCCG
TGTGGACGCGTCAGCTGCTGAGTTTTTCCGTGGGCGCGTCGAGCCAAGAC
AGAAACGACGAGTCGGTTGGCAAGAGCGAATTTCTAGCGTTCCACATGGC
AAAGAAGCTGGTGCTGTCAGGCGAGTCGAAAACCAACTCGAACTCGCGGT
TGCCGGAAACGGAAGCATTCAATCGATCCGTGTGGACGCGTCAGCTGCTG
AGTTTTTCCGTGGGCGCGTCGAGCCAAGACAGAAACGACGAGGGCCCGTC
TCACACGCTATTCGAGTCGCGTTGTGCGAGGATGCTCGAGGACAGGCGCT
GTGGGAGTATGCCCCGGGAGGCGATGGCTTCGATCGGGAAGCGATGCCAG
GGCGATTGGGCCCGTCTCACACGCTATTCGAGTCGCGTTGTGCGAGGATG
CTCGAGGACAGGCGCTGTGGGAGTATGCCCCGGGAGGCGATGGCTTCGAT
CGGGAAGCGATGCCAGGGCGATTGCGGGTGCGTGTGGCTCGACAAGTGCT
ACTGGACTAGCGAGCCGTCACCCACTGCAGACAAGGAAGAGTGGCTTGAG
TACGACATGCGGGTGCGTGTGGCTCGACAAGTGCTACTGGACTAGCGAGC
CGTCACCCACTGCAGACAAGGAAGAGTGGCTTGAGTACGACATGCAGGAG
AACACGGTTGCGGTGGTTTTCTCGTTCATGCTGACCCCTTACACGTCCTT
CTGGCAGCCCGAACAGCCTACGTACAACCCAATCGAGGCTTGCTTTGAGC
TGACGCACCCTCAGATCGACGGTGGCAAGACGCCCTACTATGAGAGCCCT
CGTTTCGATGTGCACCCCCGCATGAAGCAGGAGAACACGGTTGCGGTGGT
TTTCTCGTTCATGCTGACCCCTTACACGTCCTTCTGGCAGCCCGAACAGC
CTACGTACAACCCAATCGAGGCTTGCTTTGAGCTGACGCACCCTCAGATC
GACGGTGGCAAGACGCCCTACTATGAGAGCCCTCGTTTCGATGTGCACCC
CCGCATGAAGCGCCAGCAGTTTAACTTGCCCCATCCGATTGTAAGTTTCG
GCGGGCGGGTCAGGATCCGCCTCTTGGGGATGGCGCAAAGGAAAACCTTG
CCGGAGAGCATGGGTGACACAGCCAACCATTACCACACCTGCATCTCCTA
CGCGGCGCTGTGCGGGTCCTTCCTCCTCTCTTGCTCCATTGCCGACCACC
CTGATGGCCCGGCAAGCCGGAGCGCCAAGATTCCTCCCGTCCGCGGGGGC
TCTGTTGCTACCATCGGCACAGGAAGAGGAGGAGGAGGAAAAGGAGGAGG
AGGGGGCGAGGATGTCGACCAGGGAGGAGGAGCGACCAGCACCAGCAAGA
AGACCAAGACCAATGACAATGACAATGACAAGTTGCGCATGCGGTGGGCC
GTGCTTGTGCACGTGTACCCGGTCAACCAGCCGGAAAACGCGGCAGCCCT
CGACCAAAGCGGAGAGAAGAAGAAGCCACTCAAGGTCAAGGTTTTCAGCG
ACACTCCCTGCCTTGACCTCCTTGAGCTTTACTCGAAGATGTACTTTCCC
GACGAAAAGCGTACCCGGCTGGTGCTGACCGGTCCCGGAGGGATGGACCT
CCCCGCTGAAGATGGCAACCTGGTTGGAGATTTCGCCGTCCAAGGCAAGC
TGTCCCTTGTAGACCCGTCCCGACAGTAGCGCCAGCAGTTTAACTTGCCC
CATCCGATTGTAAGTTTCGGCGGGCGGGTCAGGATCCGCCTCTTGGGGAT
GGCGCAAAGGAAAACCTTGCCGGAGAGCATGGGTGACACAGCCAACCATT
ACCACACCTGCATCTCCTACGCGGCGCTGTGCGGGTCCTTCCTCCTCTCT
TGCTCCATTGCCGACCACCCTGATGGCCCGGCAAGCCGGAGCGCCAAGAT
TCCTCCCGTCCGCGGGGGCTCTGTTGCTACCATCGGCACAGGAAGAGGAG
GAGGAGGAAAAGGAGGAGGAGGGGGCGAGGATGTCGACCAGGGAGGAGGA
GCGACCAGCACCAGCAAGAAGACCAAGACCAATGACAATGACAATGACAA
GTTGCGCATGCGGTGGGCCGTGCTTGTGCACGTGTACCCGGTCAACCAGC
CGGAAAACGCGGCAGCCCTCGACCAAAGCGGAGAGAAGAAGAAGCCACTC
AAGGTCAAGGTTTTCAGCGACACTCCCTGCCTTGACCTCCTTGAGCTTTA
CTCGAAGATGTACTTTCCCGACGAAAAGCGTACCCGGCTGGTGCTGACCG
GTCCCGGAGGGATGGACCTCCCCGCTGAAGATGGCAACCTGGTTGGAGAT
TTCGCCGTCCAAGGCAAGCTGTCCCTTGTAGACCCGTCCCGACAGTAG back to top
|