mRNA_E-fasciculatus_F_contig12667.2036.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12667.2036.1
Unique NamemRNA_E-fasciculatus_F_contig12667.2036.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: D8LRL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL4_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 1.270e-139
Identity = 217/261 (83.14%), Postives = 221/261 (84.67%), Query Frame = 1
Query:    1 LTQRTPKRAACPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARR-PAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWGEPGKEVEPEVAENAHEAS 780
            L +  P   ACP VPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSS  V L                GRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEER DGGGLFD ILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRE IAARR  AAAE SRRLVCSDVAVIDTGKGNIREVLRVSW EP +  EP V E+A  A+
Sbjct:  112 LLRVVPSAKACPGVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSCPVGLDGGSGGDASVGSGT--GRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEER-DGGGLFDLILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFREVIAARRCSAAAEASRRLVCSDVAVIDTGKGNIREVLRVSWEEPEEGAEPGVTESARVAA 369          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A6H5JBA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA0_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 7.470e-139
Identity = 215/255 (84.31%), Postives = 218/255 (85.49%), Query Frame = 1
Query:    7 QRTPKRAACPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAAR-RPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWGEPGKEVEPEVAENA 768
            QRT   A CPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSS  + L                GRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEER DGGGLFD ILTAETLYTTAVADKVLDMV RHLAPGGQALVASKRFYFGTGGSTQYFRE+IAAR   AA E SRRLVCSD AVIDTGKGNIREVLRVSW EP +  EP VAENA
Sbjct:   87 QRT---ATCPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSSPMGLDGGSGEDGSVGSGT--GRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEER-DGGGLFDLILTAETLYTTAVADKVLDMVGRHLAPGGQALVASKRFYFGTGGSTQYFREAIAARCNSAAVEASRRLVCSDAAVIDTGKGNIREVLRVSWEEPEEGAEPGVAENA 335          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A835Z957_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z957_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.290e-53
Identity = 110/258 (42.64%), Postives = 138/258 (53.49%), Query Frame = 1
Query:   40 VPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNV-EAHHWPL----------------------------AEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWG 726
            V EE+DLVPG+YEGGLKVWE S+DL+E++L     +  +                    K V+ELGCGHG PG+ AL+QG  V F+D+NREV+E  TIPNVR N  EA    L                            A +Y GDW  L  +L +  DG   FD ILTAETLYT     ++  ++   LAPGG ALVA+KR+YFG GGS  +F++ +A            + C    VIDTG  NIREVL VSWG
Sbjct:   62 VDEETDLVPGVYEGGLKVWECSVDLIEYMLDRPEVYGPEKMAG----------------KRVIELGCGHGLPGVYALRQGAHVVFTDYNREVLEHATIPNVRANCPEALPSSLSIDTSGGRGGGMSAGQGSAQGVVNAGGRAAFYFGDWGGLPEMLAD--DGEERFDLILTAETLYTATATVQIHRLIETLLAPGGHALVAAKRYYFGCGGSCAHFKQLVAPP----------MACETACVIDTGVANIREVLLVSWG 291          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A485L4J9_9STRA (Aste57867_15473 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4J9_9STRA)

HSP 1 Score: 164 bits (415), Expect = 8.010e-46
Identity = 99/232 (42.67%), Postives = 136/232 (58.62%), Query Frame = 1
Query:   52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVRLNVEAHHWPL-----AEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWGE 729
            SD+  G+YEGG K+WE ++DL+++L+ ++SSF +                       V+ELGCGHG PGI AL QG   V FSD+N+EVIE  TIPNV  N      P+     A YYSGDW  +S L+  +G    LFD ILTAET+YT +VA  +   + RHL  GG ALVA+K +YFGTGGS  +F++ I   R    +  R LV   V   +  + N+RE++RV++ +
Sbjct:   84 SDIQTGVYEGGFKLWEGAVDLIQYLMRHASSFPMASQADYR----------------VMELGCGHGLPGIYALLQGAAEVYFSDYNKEVIELATIPNVLRNAS----PIVAAAKARYYSGDWQLVSDLMHTQGVPP-LFDLILTAETIYTESVAITLAQTIVRHLKRGGVALVAAKTYYFGTGGSVHHFKQLIDDVRST--DGRRLLVAETVWDSNDARSNMREIVRVTYAD 292          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A7S3HG77_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG77_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.620e-44
Identity = 98/226 (43.36%), Postives = 124/226 (54.87%), Query Frame = 1
Query:   46 EESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVS 720
            +E+D++PG+YEGG KVWE S+DL   LL  + +   +L                      +ELGCGHGFPG+ AL+ G  RV FSD N EVI  VT PN+ LN        AE YSGDW  LS  +  RG   G FD IL+AETLYT A  +K+L M+ RHL+  G AL+ASKRFYFG GG T      + A       V +        V   G  NIRE++R++
Sbjct:   76 KETDIIPGVYEGGYKVWECSVDLTAMLLQKACTLP-ELSTCR-----------------AIELGCGHGFPGVAALKLGCPRVVFSDLNAEVINAVTWPNIFLNAR-DIMNRAECYSGDWDELSSTVLSRGSDDGKFDLILSAETLYTEASCNKILSMILRHLSNTGVALIASKRFYFGVGGGTYTLETLVQACGVLNYHVEQ--------VYQDGASNIREIVRLT 274          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A1V9YGQ4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGQ4_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.230e-44
Identity = 94/225 (41.78%), Postives = 130/225 (57.78%), Query Frame = 1
Query:   52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSW 723
            SDL  G+YEGG K+WE S+DL+E+L ++  +F +                   R   V+ELGCGHG PGI ALQQG   V FSD+N EVI+  TIPN +  V + H   A +YSGDW  +S  +    +    +D ILTAETLYT  V   +L+ + RHL P G ALVA+K +YFGTGGS  + +  IAA        +  +V + V   +  + NIRE+++V++
Sbjct:   77 SDLETGVYEGGFKLWECSVDLIEYLEAHKEAFGIGT-----------------RSLRVMELGCGHGLPGIYALQQGAAHVLFSDYNSEVIDLATIPNAQ-RVASAHLNRATFYSGDWGHMSAAMTAANEDTE-YDLILTAETLYTEEVTIALLETIKRHLKPSGVALVAAKTYYFGTGGSVHHLKSLIAA--------TGTMVATTVWNGNDCRSNIREIVQVTY 274          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A024UPA8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPA8_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.740e-42
Identity = 92/226 (40.71%), Postives = 128/226 (56.64%), Query Frame = 1
Query:   52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAP-GGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSW 723
            SD+  G+YEGG K+WE ++DL+++L +N+ +  V                       VLELGCGHG PG+ ALQQG   V FSD+N EVIE  TIPN++ N  A+    A +YSGDW  +S  +   G     FD ILTAET+YT +V+ ++   + RHL   GG ALVA+K +YFGTGGS  +F+  +A            +V   V   +  K N+RE++ VS+
Sbjct:   85 SDIQTGVYEGGFKLWECAVDLIQYLAANAPNLPVHNGWR------------------VLELGCGHGLPGLHALQQGAAHVTFSDYNHEVIELATIPNLQRNANANDLTKATFYSGDWQLMSEDMLAHGTDME-FDLILTAETIYTESVSVELFQTIQRHLKRRGGIALVAAKSYYFGTGGSVHHFKSLVAQ--------DGTMVARTVWESNDAKSNVREIVHVSY 283          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: T0R0A7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R0A7_SAPDV)

HSP 1 Score: 155 bits (391), Expect = 1.840e-42
Identity = 92/226 (40.71%), Postives = 126/226 (55.75%), Query Frame = 1
Query:   55 DLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVR--LNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSW 723
            DL  G+YEGG K+WE S+DL+E+L  + + F +                       V+ELGCGHG PGI ALQQG   V FSD+N EVIE  TIPN         HH   A +YSGDW+++S  +    D    +D +LTAETLYT  V   +L M+ RHL   G ALVA+K +YFGTGGS  +F++ +A            +V + V   +  + NIRE+++V++
Sbjct:   77 DLETGVYEGGFKLWECSIDLIEYLQQHQADFPIGACGLR-----------------VMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPNTMRCAGDRLHH---ASFYSGDWANVSEAMAANEDAS--YDLVLTAETLYTEDVTISLLAMIKRHLKRSGVALVAAKTYYFGTGGSVHHFKDLVAREGD--------MVATTVWNGNDCRSNIREIVQVTY 272          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A8J4B1M0_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B1M0_9CHLO)

HSP 1 Score: 154 bits (389), Expect = 8.120e-42
Identity = 96/230 (41.74%), Postives = 128/230 (55.65%), Query Frame = 1
Query:   52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVE----AHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPG-GQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDT-GKGNIREVLRVSW 723
            SDLVPG YEGG K+WE SLDL + LLS  S  S  +                   K VLELGCGHG PGI+AL  G  V F D+N EV+ ++TIPNV  N+E    +   P   Y+SGDW  +   L  RG GG  +D IL++ET+Y+    +++L+ + + L P  G AL+A+KR+YFG GG T+ FR  +        E       S VA +D    GN+REVL + +
Sbjct:   82 SDLVPGKYEGGFKLWECSLDLCKTLLSRYSVASERVLTDSEFSTELHG-------KRVLELGCGHGLPGILALVSGAEVHFQDYNHEVLRRLTIPNVIANMERLPRSRPRPATRYFSGDWRLVGEHLTSRGYGGH-YDLILSSETIYSVPAQERLLECIKQLLQPPHGVALIAAKRYYFGVGGGTKSFRNLV--------EEDGIFEVSVVAQVDDKASGNVREVLMLKF 295          
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: M4BGT3_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGT3_HYAAE)

HSP 1 Score: 153 bits (386), Expect = 1.510e-41
Identity = 95/230 (41.30%), Postives = 131/230 (56.96%), Query Frame = 1
Query:   52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVR-VCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEE---RGDGGGLFDFILTAETLYTTAVADKVLDMVARHL--APGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSW 723
            +D+  G+YEGG K+WE +LDLV+ L +     +                       SVLELGCGHG PGI ALQQG   V FSD+N+EV+E  T PNVR NV+   +  AE+Y+G WSS+S  +E    +      FD ILTAET+YT AVA ++   + RHL  AP  +ALVA+K++YFGT GS Q+F   + A     A+         V     G+ NIRE++++++
Sbjct:   82 TDVQTGVYEGGFKLWECALDLVKLLETQRRQGAT-------------------MSASVLELGCGHGLPGIYALQQGAELVTFSDYNKEVLELTTCPNVRQNVDEQVFERAEFYAGAWSSMSQYMETMELKTQDQMQFDLILTAETIYTDAVAVELYQTIKRHLRRAPNARALVAAKKYYFGTNGSVQHFVGLVRADGVFTADT--------VWQERDGRSNIREIVQLTY 284          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRL4_ECTSI1.270e-13983.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBA0_9PHAE7.470e-13984.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z957_9STRA4.290e-5342.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A485L4J9_9STRA8.010e-4642.67Aste57867_15473 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3HG77_9STRA1.620e-4443.36Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A1V9YGQ4_9STRA2.230e-4441.78Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024UPA8_9STRA1.740e-4240.71Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T0R0A7_SAPDV1.840e-4240.71Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A8J4B1M0_9CHLO8.120e-4241.74Uncharacterized protein n=2 Tax=Volvox africanus T... [more]
M4BGT3_HYAAE1.510e-4141.30Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12667contigE-fasciculatus_F_contig12667:462..3692 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score410.6
Seed ortholog evalue5.5e-112
Seed eggNOG ortholog2880.D8LRL4
Preferred nameMETTL18
KEGG koko:K14837,ko:K18803
GOsGO:0000027,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006417,GO:0006450,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008757,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016043,GO:0016740,GO:0016741,GO:0018021,GO:0018064,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0031072,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032259,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0036211,GO:0042038,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:1901564,GO:2000112
EggNOG free text desc.peptidase activity, acting on L-amino acid peptides
EggNOG OGsCOG3897@1,KOG2920@2759
EC2.1.1.85
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNicotinamide N-methyltransferase-like
Ec32 orthologEc-12_000250.1
Exons5
Model size786
Cds size786
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12667.2036.1prot_E-fasciculatus_F_contig12667.2036.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12667 462..3692 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927774.170704-CDS-E-fasciculatus_F_contig12667:461..7461622927774.170704-CDS-E-fasciculatus_F_contig12667:461..746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 462..746 -
1695995688.1153073-CDS-E-fasciculatus_F_contig12667:461..7461695995688.1153073-CDS-E-fasciculatus_F_contig12667:461..746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 462..746 -
1622927774.1864488-CDS-E-fasciculatus_F_contig12667:1196..12711622927774.1864488-CDS-E-fasciculatus_F_contig12667:1196..1271Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 1197..1271 -
1695995688.1282213-CDS-E-fasciculatus_F_contig12667:1196..12711695995688.1282213-CDS-E-fasciculatus_F_contig12667:1196..1271Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 1197..1271 -
1622927774.1978242-CDS-E-fasciculatus_F_contig12667:2093..22421622927774.1978242-CDS-E-fasciculatus_F_contig12667:2093..2242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 2094..2242 -
1695995688.1378274-CDS-E-fasciculatus_F_contig12667:2093..22421695995688.1378274-CDS-E-fasciculatus_F_contig12667:2093..2242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 2094..2242 -
1622927774.209791-CDS-E-fasciculatus_F_contig12667:2700..27461622927774.209791-CDS-E-fasciculatus_F_contig12667:2700..2746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 2701..2746 -
1695995688.1474066-CDS-E-fasciculatus_F_contig12667:2700..27461695995688.1474066-CDS-E-fasciculatus_F_contig12667:2700..2746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 2701..2746 -
1622927774.2224617-CDS-E-fasciculatus_F_contig12667:3461..36921622927774.2224617-CDS-E-fasciculatus_F_contig12667:3461..3692Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 3462..3692 -
1695995688.156752-CDS-E-fasciculatus_F_contig12667:3461..36921695995688.156752-CDS-E-fasciculatus_F_contig12667:3461..3692Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12667 3462..3692 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12667.2036.1

>prot_E-fasciculatus_F_contig12667.2036.1 ID=prot_E-fasciculatus_F_contig12667.2036.1|Name=mRNA_E-fasciculatus_F_contig12667.2036.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=262bp
LTQRTPKRAACPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFS
VDLDGGSGSGGDGSVGSGTGRPKSVLELGCGHGFPGIVALQQGVRVCFSD
FNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLF
DFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYF
RESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWGEPGKEVEP
EVAENAHEAST*
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mRNA from alignment at E-fasciculatus_F_contig12667:462..3692-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12667.2036.1 ID=mRNA_E-fasciculatus_F_contig12667.2036.1|Name=mRNA_E-fasciculatus_F_contig12667.2036.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3231bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12667:462..3692- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTGACTCAACGAACGCCTAAACGCGCAGCCTGCCCAGACGTGCCCGAAGA GAGCGACCTTGTGCCGGGACTGTATGAAGGAGGCCTCAAGGTATGGGAGG CCAGCCTCGACCTCGTGGAACACCTCTTGTCAAACTCTTCCTCTTTCTCC GTGGATCTCGACGGTGGAAGTGGAAGCGGCGGGGACGGGAGCGTTGGGAG CGGGACGGGAAGACCTAAGAGCGTGCTCGAGGTGTGCATATGATGCCCCA AACTTTCCCCTTGGCTCCACTTGTAAAGATTTTTCTCTCTCGTGTTGTGG CTGATTTTTCTTGGCACGGAGAGGGCTGCTGCGTCTGCCTACACAGTGCT TCCACCTTCGATGAGCATCGGTTGTTTGTTGAGGGACGTGAGGAGGAGTA CGTGGAGCTACGTGTAGCTTAGCGCTCTTGCGTTATTGTGGCGTGCCCCC CGGCCCCAGATGGTTTGCACACTGTACATGGCGAGAGAGACTACTGAGGC ACAGGGGAGCAACATGTCAATAGTATTAGTCCAGCAGGGCACTTGTCTCA GGGCTTCCTTCATTCCGTGCCTGTGGTATGTAATTTAATTGCCGTCCCTG TTGAATTAATAAATTCAGTCGTGTTGTTCCCGCTTTTGATTTGGAGCGAC TTGGATCATGCCATCCCTTAGTCTTAGTCTTAGTCTTAGTCTACATCAAA CCTGCAAAACTACCGCACCTTGTTCTTTTGTTCCTTGCAGGATGTGCCTT CTCGGATTCGATCGAACCTGCCAAAACCAGCGTTGACTATAGGTACCCGT CTACACCCTTGTGAGAAACGATGAGCCTCCGTTTTTTTCTCACGCGCTCC ACCGCCGCCTCTCTGCTCGATCGTGCCAATCGTTGTGCCGGGCTGCTGCT GCTGCTGCTGCTGCTACCGTCGCTATAAACATGTCGGGCATTGCAGCTGG GTTGTGGGCACGGGTTCCCGGGTATCGTTGCTCTCCAACAAGGTGTGTGT TCAAAGTGGAAGCGTGTGCTGGCTTACCATGGCAGTGATACAAAATAATC CTTTTTCGAGATGGAGTAGGCTTGCCTCTGGAGCTGTAGACTAGACGTTG CATCGGGCAATCCAACTATCATAAAATTATGTTCCATTCACTGCGTCCTT GATTTGTTTCGAGTACCAGAATTTGACTACGCAATTCCAAAACAAGAATA TGGCAAACGCAATAGCGCGAAGAACACCCAAATTTTGTAGAGGGCTAGTT AACTTTGTTCGGAAGAAGGGGATGCAGCTCTGGGTCAAATTTAGATGTGT GCGGACATCAACCAGGGTCAAGTAGAGATGTGTGGTGAACATCAACGAAG TGGTCGGATGCGAGACAAGGAGTAAGTGAGTCACTAGAGTTGCAGACGCC GTGAACGCATGGTATTTCCAACTCGAGCACTCCGAATTCCGAAATTTCAG GTGTACGCGTGTGCTTCTCGGACTTCAACCGCGAGGTGATCGAACAGGTC ACCATCCCCAACGTCAGGCTCAACGTCGAGGCACATCACTGGCCTCTGGC AGAGTACTATAGCGGGGATTGGAGCTCTTTGTCCCCTCTTCTTGAAGAGG TGATGCATTGACGTGCCATGTCATGTGTGGTTTGATGCTATTTATATCAG AAGATGATCGTTCCTCTCCTTGAAGAGGTAATGCATTGACGTGCCATGTC ATGTGTGGTTTGATGCTATTTATATCAGAAGATGATCGTTCCTCTCCTTG AAGAGGTAATGCATTGACGTGCCGTGTCATGTGTGGTTTGATGCTATTTA CATCAGAAGATGATCGTTCCTCTCCTTGAAGAGGTGATGCAATGACGTCT CATGTCATGTGTGGTGTGATGCTACAGTATATCAGAAGATGATTGCTCCT CCCCTTGAAGAGGTGATGCAATGACGTGTCATGTCATGTGTGGTGTGATG CTATATGATACGATGGGGGGTATGTGACTTGCTTTAGCCATCTTGGAAGG CGCCGTGGTACGGGGGGATGGGAGGCTACCTCCTGTTCTTGAGTATTTTC TCTGCCCGAGTGTTTGAGTGTTTTGGAGGTCACCGCCATCGGCATCATGC TTTCCGTCCTTTGTCCTCCTCCCATCCAAACTGAACTGCTGCAACAGGAT ACCAACAGCAGTTACGTTTGCTGCTATCTGCTAATGTGTTTCAACATGGC GAATAGCTCTTTGCAATGTTTGTGGTGTGCTCACGCTCGTTGTCGTTTCC ATTTGTCCTCGCTGCTTGCTTCCTTCTGTCCTACTAGTCTTTGTGCTTAC TCTCCCTTGCCGATACTGTATCGTTCTAAATTTTCGGCGCTTGCCTCTGC CTCCTCTCCATTGTTTTCTCTCTCGTGACCGCTGGCGAAACATCGAAATC ACCATGGTCGGGTTTGTTTAGAGGGGGGATGGAGGTGGGCTCTTCGATTT CATCCTCACGGCAGAGACTCTGTACACCACGGCGGTTGCCGACAAGGTGA AATATGAGAAATATGACTCTGTAAACCAAACGTCGCGCACCCTGTGTCAC ACACTCACACACGTGGACGGCCTTCCAAGCCTGCAAGGATTGTTCTTGGG CACTCACGCACGTCTTGAGAAAGGGCATACCGTGGTGTTTCTAGACTACA TGTAAGCCGCAGCCGTTACCTCACTACCCCCCACTGCGTGTTGTTGTGGT GATTGATTGCCTTCTACGGCAAGATTATGATTTCGAGTAGATAGCGATAG CGGAATCCCCAGATCGTAGATGCTTGCATCTGTTCGACACATTCAATTCC CCCACAAGGTCAGCGCGCTCACCCACCGTACGAAACGGCCCCTCACCACC CAATCCCGCCGCCGCCGCCGCCGGTGGAATCCAAACTAATACTACTTATA CCGTAAACCGACTGCGACGCACATTGAATATTTCCAATAATATAAGGTCC TCGACATGGTGGCGAGACACCTTGCACCGGGCGGCCAAGCCCTGGTGGCC TCCAAGCGGTTTTACTTCGGCACCGGGGGCAGCACGCAGTACTTCCGAGA GTCGATTGCTGCTAGACGTCCTGCTGCTGCGGAGGTATCGAGGAGGCTTG TGTGCTCCGACGTGGCCGTGATCGACACTGGGAAGGGCAACATCCGGGAG GTGTTGAGGGTCTCCTGGGGGGAACCGGGGAAGGAGGTGGAGCCCGAGGT GGCGGAGAACGCGCACGAAGCCTCGACTTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12667:462..3692-

>mRNA_E-fasciculatus_F_contig12667.2036.1 ID=mRNA_E-fasciculatus_F_contig12667.2036.1|Name=mRNA_E-fasciculatus_F_contig12667.2036.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12667:462..3692- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTGACTCAACGAACGCCTAAACGCGCAGCCTGCCCAGACGTGCCCGAAGA
GAGCGACCTTGTGCCGGGACTGTATGAAGGAGGCCTCAAGGTATGGGAGG
CCAGCCTCGACCTCGTGGAACACCTCTTGTCAAACTCTTCCTCTTTCTCC
GTGGATCTCGACGGTGGAAGTGGAAGCGGCGGGGACGGGAGCGTTGGGAG
CGGGACGGGAAGACCTAAGAGCGTGCTCGAGCTGACTCAACGAACGCCTA
AACGCGCAGCCTGCCCAGACGTGCCCGAAGAGAGCGACCTTGTGCCGGGA
CTGTATGAAGGAGGCCTCAAGGTATGGGAGGCCAGCCTCGACCTCGTGGA
ACACCTCTTGTCAAACTCTTCCTCTTTCTCCGTGGATCTCGACGGTGGAA
GTGGAAGCGGCGGGGACGGGAGCGTTGGGAGCGGGACGGGAAGACCTAAG
AGCGTGCTCGAGCTGGGTTGTGGGCACGGGTTCCCGGGTATCGTTGCTCT
CCAACAAGCTGGGTTGTGGGCACGGGTTCCCGGGTATCGTTGCTCTCCAA
CAAGGTGTACGCGTGTGCTTCTCGGACTTCAACCGCGAGGTGATCGAACA
GGTCACCATCCCCAACGTCAGGCTCAACGTCGAGGCACATCACTGGCCTC
TGGCAGAGTACTATAGCGGGGATTGGAGCTCTTTGTCCCCTCTTCTTGAA
GAGGTGTACGCGTGTGCTTCTCGGACTTCAACCGCGAGGTGATCGAACAG
GTCACCATCCCCAACGTCAGGCTCAACGTCGAGGCACATCACTGGCCTCT
GGCAGAGTACTATAGCGGGGATTGGAGCTCTTTGTCCCCTCTTCTTGAAG
AGAGGGGGGATGGAGGTGGGCTCTTCGATTTCATCCTCACGGCAGAGACT
CTGTACACCACGGCGGTTGCCGACAAGAGGGGGGATGGAGGTGGGCTCTT
CGATTTCATCCTCACGGCAGAGACTCTGTACACCACGGCGGTTGCCGACA
AGGTCCTCGACATGGTGGCGAGACACCTTGCACCGGGCGGCCAAGCCCTG
GTGGCCTCCAAGCGGTTTTACTTCGGCACCGGGGGCAGCACGCAGTACTT
CCGAGAGTCGATTGCTGCTAGACGTCCTGCTGCTGCGGAGGTATCGAGGA
GGCTTGTGTGCTCCGACGTGGCCGTGATCGACACTGGGAAGGGCAACATC
CGGGAGGTGTTGAGGGTCTCCTGGGGGGAACCGGGGAAGGAGGTGGAGCC
CGAGGTGGCGGAGAACGCGCACGAAGCCTCGACTTAAGTCCTCGACATGG
TGGCGAGACACCTTGCACCGGGCGGCCAAGCCCTGGTGGCCTCCAAGCGG
TTTTACTTCGGCACCGGGGGCAGCACGCAGTACTTCCGAGAGTCGATTGC
TGCTAGACGTCCTGCTGCTGCGGAGGTATCGAGGAGGCTTGTGTGCTCCG
ACGTGGCCGTGATCGACACTGGGAAGGGCAACATCCGGGAGGTGTTGAGG
GTCTCCTGGGGGGAACCGGGGAAGGAGGTGGAGCCCGAGGTGGCGGAGAA
CGCGCACGAAGCCTCGACTTAA
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