mRNA_E-fasciculatus_F_contig12654.2030.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: D8LDF4_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF4_ECTSI) HSP 1 Score: 202 bits (515), Expect = 1.130e-63 Identity = 99/107 (92.52%), Postives = 103/107 (96.26%), Query Frame = 1
Query: 1 FWQDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEVASK 321
F +DGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDK+EER DAYLKAYD +ILGDGGFDFVL+LL EVASK
Sbjct: 160 FDEDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKIEERTDAYLKAYDVIILGDGGFDFVLELLEEVASK 266
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: A0A6H5JI70_9PHAE (5'-nucleotidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI70_9PHAE) HSP 1 Score: 194 bits (492), Expect = 9.310e-60 Identity = 95/107 (88.79%), Postives = 100/107 (93.46%), Query Frame = 1
Query: 1 FWQDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEVASK 321
F +DGNMTGFVGECFHVFNKHAS+SAVKPYFETDEMRCRS+VLLLGDSLGDLNMAKGL AEE LTVGFLNDKVEER DAYLKAYD VILGDG FDFVL+LL +VASK
Sbjct: 194 FDEDGNMTGFVGECFHVFNKHASASAVKPYFETDEMRCRSNVLLLGDSLGDLNMAKGLRAEETLTVGFLNDKVEERADAYLKAYDVVILGDGSFDFVLELLEQVASK 300
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: A0A835YMP4_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP4_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.880e-29 Identity = 55/102 (53.92%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 10 DGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKVEERMDAYLKAYDAVILG-DGGFDFVLKLLGEV 312
+G GF G+ FHVFNK A + +PYF ++E++ R +VLLLGDSLGDL MA GL A+E+L+VGFLND+ EER+ +YL YD VI+G D G + L L+ E+
Sbjct: 169 NGGFIGFTGQLFHVFNKRAGAVLDEPYFMSEEVKLRRNVLLLGDSLGDLQMASGLEADEVLSVGFLNDQAEERIGSYLAGYDVVIIGPDAGLQYALDLVREL 270
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: W7TPE8_9STRA (5'-nucleotidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPE8_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.710e-23 Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 7 QDGNMTGFVGECFHVFNKHASSSA-VKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEVAS 318
+DG + GF FHVFNK A S YF + R +L+GDSLGDL+M+ GL EEI+ VG LND+VEER+D Y + +D V+LGDG +++ LL E+ S
Sbjct: 263 EDGVLVGFTEPVFHVFNKRAESVLNTSAYFHQIDYEKRKHAILVGDSLGDLHMSDGLELEEIIKVGLLNDRVEERLDEYSQKFDVVLLGDGDLTYIIGLLRELIS 367
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: A0A7S3LZW9_9STRA (5'-nucleotidase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZW9_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.940e-21 Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 10 DGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEE--ILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEVAS 318
+G +TGF HVFNK +++ +F T++++ R+++LLLGDSLGD+ M++G+ + I+ VGFLND+VE RMD YL+ YD VIL D GFD LL E+
Sbjct: 234 EGKVTGFEQPLLHVFNKKSTAYLHTNFFNTEDIKDRTNLLLLGDSLGDITMSEGMEINDDRIIKVGFLNDRVE-RMDQYLEKYDVVILDDPGFDIPYYLLQEICE 337
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: A0A0D2U9Z3_CAPO3 (5'-nucleotidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U9Z3_CAPO3) HSP 1 Score: 95.9 bits (237), Expect = 3.740e-21 Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = 1
Query: 10 DGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEVAS 318
+G +GF G+ HV+NK P ++ + R +V+LLGDSLGDL M++G+ + ILT+GFLNDKV ER+++Y +A+D VILGDG D V L+ + S
Sbjct: 284 EGYTSGFAGKTIHVYNKQDVVVKDSPVHKS--IADRHNVILLGDSLGDLQMSRGVDVDNILTIGFLNDKVAERLESYKQAFDVVILGDGSVDLVYNLISMIIS 384
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: UPI0001FE3700 (5'-nucleotidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE3700) HSP 1 Score: 95.9 bits (237), Expect = 4.900e-21 Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = 1
Query: 10 DGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEVAS 318
+G +GF G+ HV+NK P ++ + R +V+LLGDSLGDL M++G+ + ILT+GFLNDKV ER+++Y +A+D VILGDG D V L+ + S
Sbjct: 321 EGYTSGFAGKTIHVYNKQDVVVKDSPVHKS--IADRHNVILLGDSLGDLQMSRGVDVDNILTIGFLNDKVAERLESYKQAFDVVILGDGSVDLVYNLISMIIS 421
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: A0A8C8CJP5_ONCTS (5'-nucleotidase n=2 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C8CJP5_ONCTS) HSP 1 Score: 92.8 bits (229), Expect = 1.020e-20 Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 1 FWQDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGL-SAEEILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEV 312
F ++G + GF GE HVFNKH + YF+ + C ++LLGDSLGDLNMA G+ + E IL +GFLNDKVE+R++ YL +YD V++ D D +L ++
Sbjct: 163 FDENGELRGFKGELIHVFNKHDGALRNTEYFKQVKDNCN--IVLLGDSLGDLNMADGVPNVENILKIGFLNDKVEDRLEKYLDSYDIVLVKDETLDVPNSILQKI 265
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: A0A8J6K081_ELECQ (5'-nucleotidase n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6K081_ELECQ) HSP 1 Score: 90.5 bits (223), Expect = 1.100e-20 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 1 FWQDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSA-EEILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEVASK 321
F +G +TGF GE H +NK+ S YF+ ++ RS++LLLGD+LGDL MA+G++ E IL +GFLNDKVEE D +L++YD V++ D D V +L + +K
Sbjct: 65 FDDNGVLTGFKGELIHTYNKNNSVLRDTEYFQ--QISHRSNILLLGDTLGDLTMAEGVTTMENILRIGFLNDKVEELTDQFLQSYDIVLVTDETLDVVNGILNFITAK 170
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Match: A0A674DRM7_SALTR (5'-nucleotidase n=9 Tax=Clupeocephala TaxID=186625 RepID=A0A674DRM7_SALTR) HSP 1 Score: 92.8 bits (229), Expect = 1.440e-20 Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 1 FWQDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGL-SAEEILTVGFLNDKVEERMDAYLKAYDAVILGDGGFDFVLKLLGEV 312
F ++G + GF GE HVFNKH + YF+ + C ++LLGDSLGDLNMA G+ + E IL +GFLNDKVE+R++ YL +YD V++ D D +L ++
Sbjct: 184 FDENGELRGFKGELIHVFNKHDGALRNTEYFKQVKDNCN--IVLLGDSLGDLNMADGVPNVENILKIGFLNDKVEDRLEKYLDSYDIVLVKDETLDVPNSILQKI 286 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12654.2030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12654.2030.1 >prot_E-fasciculatus_F_contig12654.2030.1 ID=prot_E-fasciculatus_F_contig12654.2030.1|Name=mRNA_E-fasciculatus_F_contig12654.2030.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=102bp MTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKback to top mRNA from alignment at E-fasciculatus_F_contig12654:1776..3368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12654.2030.1 ID=mRNA_E-fasciculatus_F_contig12654.2030.1|Name=mRNA_E-fasciculatus_F_contig12654.2030.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1593bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12654:1776..3368+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12654:1776..3368+ >mRNA_E-fasciculatus_F_contig12654.2030.1 ID=mRNA_E-fasciculatus_F_contig12654.2030.1|Name=mRNA_E-fasciculatus_F_contig12654.2030.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=612bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12654:1776..3368+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |