mRNA_E-fasciculatus_F_contig1263.2014.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Match: D7G2I6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2I6_ECTSI) HSP 1 Score: 910 bits (2351), Expect = 0.000e+0 Identity = 611/649 (94.14%), Postives = 619/649 (95.38%), Query Frame = 1
Query: 1 MLPVFRLPEVSKNPAGGFVRRLPREETERERECRVKEAEELDKMKTALGLTDRELEALEDELLPGKHRGGKDPAVAAVSRPLNDVSNRDSLDLERDPQELLYGPDSAI-AKQQ-QQSPQGTCSTFSRGGKRRRGVGGRRTADTRPARHRSGLSPTGDGTTVLDLPTPRVLRRTPHSTLGAELAASAALSVRRTGEGKKTGAWTSTGDVGGGIASGSILGTTVTTEQLVVAAADAGMVNLLELRRELGRSVGQVRCLARAVKLDVQEVTRLCPVQHPRAVRFLRRWACERLAILADEILVSRAAAALERWRRASAAIAMAERKEAYLRYQGSSKLLFSLDKAYLRRLAKGWVQWGAFVEAGRARERRVLECSAAILIQRAVRGFQARRLRAWLKMVAQDKQRHLAAVTITRYAKGKVARVRYARLKAGIERVRAGELLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAARVWLARRLVRRLREEEQRLRAIRSIATLNIQRVYRGHRTRVLHGARLEMKRSRLRGEDAAATKIQALVRAHLSKRTVAKLSKKRKEKRISDARLWTETWSEDAQMWFYHNATTGKRVKAVP 1941
MLPVFRLPEVSKNPAGGFVRRLPREETERERECRVKEAEELDKMKTALGLTDRELEALEDELLPGKHRGGKDPAV SRPLNDVSNRDSL LE+DPQELLYGPDSAI AKQQ Q PQ T STFSRG ADTRP RHR+GLSPTGDGTTVLDLPTPRVLRRTPHSTLGAELAASAALSVRRTGEGKKTGAWTSTGD+GGGIASGSILGTTV+TE+LVVAAADAGMVNLLELRRELGRSVGQVRCLARAVKLDVQEVTRLCPVQHPRAVRFLRRWACERLAILADEILVSRAAAALERWRRASAAIAMAERKEAYLRYQGSSKLLFSLDKAYLRRLAKGWVQWGAFVEA RARERR+LE SAAILIQRAVRGFQARRLRAWLKMVAQDKQRHLAAVTITRYAKGKVARVRYARLKAGIERVRAGELLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAR WLARRLVRRLREEEQRLRAIRSIATLNIQRVYRGHRTRVLHGARLEMKRSRLRGEDAAATKIQALVRAHLSKRTVAKLSKKRKEKRISDARLWTETWSEDAQMWFYHNATTG+ + P
Sbjct: 1 MLPVFRLPEVSKNPAGGFVRRLPREETERERECRVKEAEELDKMKTALGLTDRELEALEDELLPGKHRGGKDPAV---SRPLNDVSNRDSLALEKDPQELLYGPDSAIIAKQQLQPPPQDTWSTFSRGXXXXXXXXXXXAADTRPERHRNGLSPTGDGTTVLDLPTPRVLRRTPHSTLGAELAASAALSVRRTGEGKKTGAWTSTGDLGGGIASGSILGTTVSTERLVVAAADAGMVNLLELRRELGRSVGQVRCLARAVKLDVQEVTRLCPVQHPRAVRFLRRWACERLAILADEILVSRAAAALERWRRASAAIAMAERKEAYLRYQGSSKLLFSLDKAYLRRLAKGWVQWGAFVEAERARERRLLEYSAAILIQRAVRGFQARRLRAWLKMVAQDKQRHLAAVTITRYAKGKVARVRYARLKAGIERVRAGELLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAARAWLARRLVRRLREEEQRLRAIRSIATLNIQRVYRGHRTRVLHGARLEMKRSRLRGEDAAATKIQALVRAHLSKRTVAKLSKKRKEKRISDARLWTETWSEDAQMWFYHNATTGEALWEPP 646
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Match: A0A836CI88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI88_9STRA) HSP 1 Score: 145 bits (366), Expect = 9.400e-32 Identity = 218/434 (50.23%), Postives = 267/434 (61.52%), Query Frame = 1
Query: 685 AADAGMVNLLELRRELGRSVGQVRCLARAVKLDVQEVTRLCPVQHPRAVRFLRRWACERL----------AILADEILVSRAAAALERWRRASAAIAMAERKEAYLRYQGSSKLLFSLDKAYLRRLAKGWVQWGAFVEAGRARERRVLECSAAILIQRAVRGFQARRLRAWLKMVAQDKQRHLAAVTITRYAKGKVARVRYARLKAGIERVRAGELLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAARVWLARRLVRRLREEEQRLRAIRSIATLNIQRVYRGHRTRVLHGARLEMKRSRLRGEDAAATKIQA-LVRAHLSKRTVAKLSKK----RKEKRISDARLWTETWSEDAQMWFYHNATTGKRVKAVP 1941
AA+AGM +++ LRR LG SVGQV LA AV+ DV V LC V PRA F++RWACERL +A ++ AA +RWR A A++ AYLRYQG+SK+LF D + R A+ W W V+A +RE + A+++Q A R AR+ A + A+ + AA +T+ A+GKV R+R + R A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EE ++ A L IQRVYRGH +R++ G +L +KR+ R AAA IQ + RA + K +K+ R +R+ DAR W E WS+DAQ WFYHN TG+ + A P
Sbjct: 266 AAEAGMESIVALRRALGASVGQVDALAGAVRGDVLGVVSLCSVAQPRARAFMKRWACERLFDIXXXXXXXXXVARQLAWGLQGAAWQRWRLACQRQRRAKKILAYLRYQGASKMLFCWDNMLVAREARAWGAWCGGVQAVLSRELLTSQEEKALVLQCAWRACAARKRVARARFTARYSHLNAAATIVTKVARGKVTRLRLQAVLRERVRAHAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEHTHELLRKAAAALTIQRVYRGHASRLVTGVKLRVKRANQRKRHAAARAIQVGIARAGIRGMAGRKAAKQALVARHRQRVMDARAWKEQWSDDAQAWFYHNDATGESLWAPP 699
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Match: A0A7S4D5A0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5A0_HETAK) HSP 1 Score: 99.4 bits (246), Expect = 5.080e-21 Identity = 43/79 (54.43%), Postives = 57/79 (72.15%), Query Frame = 3
Query: 2277 GEALWEPPSTGYTKHDGALVLSSGEVVTDPEEGMTEEERLEARKQSSCVECEQKRSTRKCDQCGDGFCTKCFRRTHATG 2513
GEALWEPPS GYTK DG LVL +GEV+ DP++ +E + + R++ CVECE+K +TR C++CGD FCT C H +G
Sbjct: 33 GEALWEPPSGGYTKDDGRLVLLTGEVIEDPDDEAAQEAKEQRRREQLCVECEEKAATRHCEECGDRFCTACLNAAHESG 111
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Match: A0A2D4BZE6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZE6_PYTIN) HSP 1 Score: 106 bits (264), Expect = 1.480e-19 Identity = 191/409 (46.70%), Postives = 245/409 (59.90%), Query Frame = 1
Query: 718 LRRELGRSVGQVRCLARAVKLDVQEVTRLCPVQHPRAVRFLRRWACERLAILADEILVSRAAAALERWRRASAAIAMAERKEAYLRYQGSSKL-LFSLDKAYLRRLAKGWVQWGAFVEAGRARERRVLECSAAILIQRAVRGFQARRLRAWLKMVAQDKQRHLAAVTITRYAKGKVARVRYARLKAGIERVRAGELLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAARVWLARRLVRRLREEEQRLRAIRSIATLNIQRVYRGHRTRVLHGARLEMKRSRLRGEDAAATKIQALVRAHLSKRTVAKLSKKRKEKRISDARLWTETWSEDAQMWFYHNATTGKRVKAVP 1941
LR EL ++ V+ L R VK D+ R+CP R + +RW +++ + +L + A ERW+ A A E+ +AYL Y+GS KL +F L+ + R+L + W W A + +A ER E A ++QRA RG++ RR+ +KM + + + R RA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R +RRLREE ++ A ++ A + IQRVYRGHR+R+ +L R + R AA KIQ R ++ TV +L ++R + ++ AR W E WS+D WFYHN TG+ + A P
Sbjct: 327 LRLELESALYNVQHLTRLVKDDIFAAQRICPASELRTSLYFKRWGRDKVEGIFRRLLYNFQGLAFERWKDAVAFEKQQEKLQAYLLYKGSKKLDVFLLNWTH-RKLRQAWTTWSALIAYQKALERAARELEAIEVLQRAFRGYRGRRIARLIKMKQRLXXXXXXXXXXXXXXXXXXXXXXXXXKRLHLRRERAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLRRLREERRQELARQNAAAIEIQRVYRGHRSRLGTQLKLLALREKNRMRYLAAVKIQXXARVRQARHTVERLRRERLAELVALARRWGEYWSDDTAQWFYHNHETGEALWAPP 734
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Match: A0A1V9Z7N4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z7N4_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.190e-14 Identity = 46/110 (41.82%), Postives = 60/110 (54.55%), Query Frame = 3
Query: 2277 GEALWEPPSTGYTKHDGA-LVLSSGEVVTDPEEGMTEEERLEARK----------------QSSCVECEQKRSTRKCDQCGDGFCTKCFRRTHATGRRTKHTWTHVGPME 2555
G+A+WEPP TGY K DG LVL G VV DP E EA++ + CVEC+ ++R+C QC D FC C+ RTH G+R HTWT +GP++
Sbjct: 617 GDAIWEPPQTGYAKADGRDLVLQDGRVVLDPAIAEQEAAAREAQQLLELELQRAAEEAQLDDALCVECDDTEASRRCAQCEDVFCDSCYDRTHGGGKRALHTWTSMGPIK 726
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Match: A0A482V1V8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V1V8_9ARCH) HSP 1 Score: 76.6 bits (187), Expect = 2.030e-10 Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 3
Query: 2280 EALWEPPSTGYTKHDGALVLSSGEVVTDPE------EG------------MTEEERLEARKQSSCVECEQKRSTRKCDQCGDGFCTKCFRRTHATGRRTKHTWTHVGPME 2555
E WEP GY K DG LVL+SGE++ DP EG + +++ K C EC ++ + C++CGD FCTKC++ HA G R H T +GP +
Sbjct: 796 ETAWEPSKQGYVKFDGKLVLTSGEIIDDPNSADGTGEGGXXXXXXXXXXEKSRAKKINGTKLLVCTECNERVAIVTCEECGDIFCTKCYKFLHALGARRSHHHTPLGPKD 905
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Match: A0A5D6Y3S6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3S6_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.140e-9 Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 1
Query: 715 ELRRELGRSVGQVRCLARAVKLDVQEVTRLCPVQHPRAVRFLRRWACERLAILADEILVSRAAAALERWRRASAAIAMAERKEAYLRYQGSSKLLFSLDKAYLRRLAKGWVQWGAFVEAGRARERRVLECSAAILIQRAVRGFQAR 1152
+LR+EL ++ V+ L R VK D+ ++CP R + +RW +++ + +L + A ++W + A E+ AYL Y+GS KL L R+L + W +W + V +A ER LE A +QRA RG + R
Sbjct: 331 DLRKELASALSSVQHLTRLVKHDIVFAQKICPANELRTSLYFKRWGRDKVESIFRRLLFNLQGVAFQQWVQVVAREKQEEKLHAYLLYRGSKKLDRFLFDWSQRKLRQAWTKWWSDVAREKAVERLALELDATRALQRAWRGHRGR 476
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Match: A0A2P4X518_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X518_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 44/123 (35.77%), Postives = 57/123 (46.34%), Query Frame = 3
Query: 2277 GEALWEPPSTGYTKHDGALVLSSGEVVTDPEE-----------------GMTEEERLEA--RKQSS------------CVECEQKRSTRKCDQCGDGFCTKCFRRTHATGRRTKHTWTHVGPM 2552
GEALW PPSTGYTK DG LVL G+++ DP E G++ E+ +A +KQ CVECE D FC C+ R H + +R KHTW +G +
Sbjct: 677 GEALWAPPSTGYTKADGKLVLQDGKII-DPSEDDIASILAAQKMPPTMNGVSNEDTSDANTKKQEXXXXXXXXXXXKLCVECEXXXXXXXXXXXXDVFCDACYERLHHSAKREKHTWRAIGSL 798 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1263.2014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1263.2014.1 >prot_E-fasciculatus_F_contig1263.2014.1 ID=prot_E-fasciculatus_F_contig1263.2014.1|Name=mRNA_E-fasciculatus_F_contig1263.2014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=661bp MLPVFRLPEVSKNPAGGFVRRLPREETERERECRVKEAEELDKMKTALGLback to top mRNA from alignment at E-fasciculatus_F_contig1263:2397..8639+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1263.2014.1 ID=mRNA_E-fasciculatus_F_contig1263.2014.1|Name=mRNA_E-fasciculatus_F_contig1263.2014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6243bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1263:2397..8639+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1263:2397..8639+ >mRNA_E-fasciculatus_F_contig1263.2014.1 ID=mRNA_E-fasciculatus_F_contig1263.2014.1|Name=mRNA_E-fasciculatus_F_contig1263.2014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3966bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1263:2397..8639+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |