mRNA_E-fasciculatus_F_contig12577.1969.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12577.1969.1
Unique NamemRNA_E-fasciculatus_F_contig12577.1969.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: D7G2U3_ECTSI (DUF913 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U3_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.610e-57
Identity = 132/136 (97.06%), Postives = 132/136 (97.06%), Query Frame = 1
Query:  832 MDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQQGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAXXXXXXXXXXXXXXXXXXXVVDDPNGK 1239
            MDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ GFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGA XXXXXXXXXXXXXXXXXX VDDP GK
Sbjct:    1 MDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ-GFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXVDDPKGK 135          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: A0A6H5LD86_9PHAE (DUF913 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD86_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 4.240e-51
Identity = 113/150 (75.33%), Postives = 113/150 (75.33%), Query Frame = 1
Query:  841 LRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ---------------QGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAXXXXXXXXXXXXXXXXXXXVVDDPNGKAE 1245
            L WVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ                GFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGA                   VVDDP GKAE
Sbjct:    9 LLWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQVGLRLCSDCVHMVKGTGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAAAAGDNRSGGGCSGM---VVDDPKGKAE 155          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: A0A7S2VVZ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVZ5_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.260e-31
Identity = 118/375 (31.47%), Postives = 182/375 (48.53%), Query Frame = 1
Query:   64 TSAAMFRRLTKEHTAVPKRRLFSLLARVRGAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVR--TDQAAQMT-VPLDISVLAVHCLAALVHTRS-GASSLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASLFIMPEQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAAGXXXXXXXXXXXXXXXXSPNADGGGVKDEKGTAGASSPVLSEMDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLN---MDGQQGFGGMGKPFQRR---YVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGA 1158
            T+A +FR    ++  VP  + FSLLAR+R + ++     +R+AAVR R+ +L + +Y HPS + L  Y   QP+L +E+VDL+R    ++ ++Q T  P  I +LA+  L ALV  RS G   +  +ARH +V  ELG+ +GQY GLLP L+R  V +L                                             D  LSLG+AFV A                  S      GV         SSP    ++QL +++ VF+L+  VVS+   AAAMT+CGL+PALL +++ +   +           P  R    Y+ SQ +QI+E  +VN++ A++AF DL  +++L +     +  +  AG+
Sbjct:  179 TTADVFRMCADKYK-VPHDKRFSLLARIRLSKSF-NTQSSRQAAVRTRLYSLLSALYVHPSMDVLAGYFQAQPDLCREIVDLIRSPPPSEVSSQTTPTPQCIRLLALDVLVALVSPRSEGGQGIPSLARHVNVMGELGVGKGQYMGLLPSLLRDCVTNL-------------------------SKEHTNIDTKKTTTSDIGIKDEDLSLGLAFVSATSSPSGAMTNSSSSILDPSIPPRSKGV--------TSSP----LEQLEFIDAVFTLISEVVSIPQTAAAMTDCGLVPALLTILESSPVLLGSPPASLSSSNPMHRTFMTYITSQTIQILEAVIVNHSNAMTAFNDLKGSDLLVNRLHKVIQGIEAAGS 514          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: A0A448ZD07_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD07_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.040e-25
Identity = 113/382 (29.58%), Postives = 168/382 (43.98%), Query Frame = 1
Query:  109 VPKRRLFSLLARVRGAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVR-------VRTDQAAQMT-------------------VPLDISVLAVHCLAALVHTRSGAS-SLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASLFIMPEQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAAGXXXXXXXXXXXXXXXXSPNADGGGVKDEKGTAGASSPVLSEMDQLR----WVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLN-----MDGQQGFGGMGKPFQ----RRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEV 1134
            +P  RLF LLA +R   ++      R AA+ RR+ AL  +++ +PSQE +  Y   QPEL  ELVDL+R       V    AA  +                   VP  I  LA+  L AL   R G + SL   ARH+++  ELG+ +GQY GLLP L+R+ +ASL  +    +                                       A+ +G+AF+EA                                    S+P +   +QL     ++++V +L  A+VS   G +++TECGL+PALLN V ++     M          + F+     R++ +QAVQI+E A+V ++ ALSAF +L   EVL +  S EV
Sbjct:  354 IPADRLFPLLADIRLTRSFHCQAS-RVAAIERRLRALITILHANPSQEVMSGYFQAQPELCVELVDLLRPTVSSGAVSASSAAPKSSKIPRQNRDHIVTLSNSPIVPYQIRELALQSLTALAARREGGNGSLTGFARHSNILTELGVGKGQYLGLLPTLIRYSLASLGSLVSTPSCRDIESNETMASSIEKSKVDA-----------------TAMDIGLAFIEAT-----------------------------------STPTVPRFEQLEKALLFMDSVLTLTSAIVSTPSGTSSLTECGLVPALLNTVSIDAEVASMKIMPDSSSESEIFRIQSLLRFITAQAVQILEGAIVTHSNALSAFHNLKGVEVLTARLSKEV 682          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: A0A7S4IYT2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IYT2_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.400e-24
Identity = 144/431 (33.41%), Postives = 195/431 (45.24%), Query Frame = 1
Query:   61 STSAAMFRRLTKE--HTAVPKRRLFSLLARVRGAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQAAQMT--------------------------------------------VPLDISVLAVHCLAALVHTRSGA---SSLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASLFIMPEQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAAGXXXXXXXXXXXXXXXXSPNADGGGVKDEKGTAGASSPVLSEMDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ-------QGFGGMGKPFQ----------RRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAG 1155
            STS   F  L +    ++VP+ RLF LLA VR A ++    + R  A+  R+ AL A++  HP+Q+ +  Y + QPEL  EL DL+R     AA  +                                            VP  +  LAV  L ALV  R  A   SS+    + +    ELG+ +GQ+ GLLP LVR+ +ASL        +      XXXXXXX          XXXXXXXXXXXXX   +SLG+AFV+AA                  P               A +    E   L +V+ V +L  AVVSV  G +A+TECGLIPAL+  V L+ + +       + F G G   Q            +V +QAVQI+E A+V +  ALSAFRDLG  ++L     +E+  +R  G
Sbjct:   42 STSDLFFLALERAGGRSSVPRSRLFPLLAEVRLARSFHRRTD-RIVAIENRLRALVAVLQSHPNQDVVGGYFAAQPELCSELCDLLRPTVSSAAVSSGTGIGGGAAAHPDGLELRGLSGRLDSSRSAGRDGISAVSDPPPPVPYSVRTLAVEALTALVARRDPAGTGSSMYPALKQSATLAELGVGKGQFLGLLPALVRYSLASLNAFLLGRGSGEQGSSXXXXXXXTDAPMEEADGXXXXXXXXXXXXXALGMSLGLAFVDAA---------------LRPPXXXXXXXXXXXXXXXARTRAEEEERALEFVDVVLTLTSAVVSVPSGTSALTECGLIPALVGTVALDSNRRARLREESRSFTGEGGEAQWGRESYADVLLNFVTAQAVQILEGAIVTHGNALSAFRDLGGVDLLVRRLVSEIEDVRREG 456          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: B7G082_PHATC (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G082_PHATC)

HSP 1 Score: 115 bits (288), Expect = 7.040e-24
Identity = 122/396 (30.81%), Postives = 171/396 (43.18%), Query Frame = 1
Query:  109 VPKRRLFSLLARVRGAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQA-------------------------AQMTVPLDISVLAVHCLAALVHTRSGAS-SLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASL------FIMPEQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAA-LSLGIAFVEAAGXXXXXXXXXXXXXXXXSPNADGGGVKDEKGTAGASSPVLSEMDQ-LRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQQGFGGMGKPFQR--------------------RYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEV 1134
            +P  RLF LLA +R A ++     AR  AV RR+ ALT +++ HPSQE +  Y   QPEL  E+VDL+R     A                         +   VP  I +LAV  LAALV  R G++ +L   AR + V  ELGI +G Y GLLP L+R+ +ASL       I+PE +                                      DA  L +G+AFVEA                                T     P + ++++ L +V+ + +L   +VS   G AA+T+CGLIPALL  V  ++D         +  QR                    R+V++QAVQI+E A+V +  AL+AF DL   EVL+   S E+
Sbjct:  328 IPSDRLFPLLADIRLARSFHSQA-ARIGAVERRLRALTTILHAHPSQEVMNGYFQAQPELCVEIVDLLRPTVSSANIAAASGRATETNSPLQRDAITCLSSCQPVPYTIRMLAVESLAALVARRDGSTGALSGSARLSTVLAELGIGKGYYLGLLPTLLRYSLASLDSPGHESILPEIEPE---------------------------------DLDDATMLDVGMAFVEA--------------------------------TMEPLPPRIVQVERTLEFVDNLLTLTSTIVSTPTGTAALTDCGLIPALLATVAHDLD---------RTIQRLLPDSSNCSTQEILRVYSLLRFVLAQAVQILEGAIVTHGNALTAFHDLRGVEVLSGRLSGEI 648          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: A0A7S2L793_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L793_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.730e-23
Identity = 103/380 (27.11%), Postives = 160/380 (42.11%), Query Frame = 1
Query:  127 FSLLARVRGAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQAAQMT----------------------------VPLDISVLAVHCLAALVHTR-SGASSLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASL--FIMPEQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAAGXXXXXXXXXXXXXXXXSPNADGGGVKDEKGTAGASSPVLSEMDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQL------NMDGQQGFGGMGKPFQR---RYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLR 1146
            F+LL+ +R + A+      R +A++ R+ AL  ++Y   S E++ AY   QPEL  ELVDLVR     +   T                            VP D+  LA+  L ALV  R S A S  + AR  +V  ELG+ +GQY GLLP L+R  +A+L  F++ E                                        D  L LG+AF+ A                          ++ E+               L +++ V +L   V+SV  G +A+T+CG+IPAL++ + L      N +         + +     +++ +QA+QI+E A+V +  ALSAF +L   +VL    S+EV  +R
Sbjct:  135 FTLLSTIRLSKAFYQNSNTRVSAIKLRLRALVTILYTLSSVESITAYFMAQPELCGELVDLVRPTVSSSGAATSSDGGVSXXXXXESESSNPILALADSPQVPYDVRALAIEALTALVARRDSPAGSFNIAARQANVLSELGVGKGQYLGLLPTLIRFSLAALNSFLLQED-------------------VNRGTEGQDDTNVDNNGDGDDTGLELGLAFIRATKPPPLPRK-----------------IRQERA--------------LEFIDAVLTLTSTVISVPSGTSALTDCGIIPALVSTIALDSQMTKNSNNSSSMEANEESYSNSLLKFITAQAIQILEGAIVTHTNALSAFHELKGVDVLVQRLSSEVENIR 464          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: A0A1Z5KPP7_FISSO (HECT-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPP7_FISSO)

HSP 1 Score: 110 bits (275), Expect = 3.270e-22
Identity = 105/362 (29.01%), Postives = 166/362 (45.86%), Query Frame = 1
Query:  109 VPKRRLFSLLARVRGAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQA-----------AQMTVPLDISVLAVHCLAALVHTRSGASSLGLVA--RHTHVFQELGITRGQYTGLLPLLVRHGVASLFIMPEQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAAGXXXXXXXXXXXXXXXXSPNADGGGVKDEKGTAGASS--PVLSEMDQ-LRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQQGFGGMGKPFQ----RRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEV 1134
            VPK R F+LL+ +R A ++    ++R  AV RR+ AL  +++ HPSQ+A+  Y S QPEL  E+VDL+R     A            Q  +P ++ +LAV  LAALV  R G ++  L    R + V  ELG+ +GQY G+LP L+R+ ++ L        +                                    + +L +G+AF+EA                                TA  SS  P   +++Q L +++++ +L  AVV+   G +A+ +CG+IP LL  V ++        G+    +     RYV+SQAVQ++E A V +  AL  F +L   +V+    S E+
Sbjct:  278 VPKERQFALLSDIRLAKSFHCR-DSRIKAVERRLRALIIMLHSHPSQDAITNYFSAQPELCAEVVDLIRPTVSGAHVAPHPTVENLLQNVIPYEVRLLAVEALAALVLRRDGLTNGALTGTTRLSSVLIELGVGKGQYLGVLPTLIRYSLSCLHTTEVPPTSPPE---------------------------------NESLEIGMAFLEA--------------------------------TALTSSRVPRKFQVEQALAFIDSILTLTSAVVATPAGTSALVDCGIIPTLLTTVSVDPVHTLKELGVENDVRISCMLRYVISQAVQLLEGAFVTHGNALLTFHELSGLDVVMKVLSREI 573          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: A0A1Z5JHS1_FISSO (HECT-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHS1_FISSO)

HSP 1 Score: 107 bits (267), Expect = 3.440e-21
Identity = 101/360 (28.06%), Postives = 159/360 (44.17%), Query Frame = 1
Query:  109 VPKRRLFSLLARVRGAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQA-----------AQMTVPLDISVLAVHCLAALVHTRSGASSLGLVA--RHTHVFQELGITRGQYTGLLPLLVRHGVASLFIMPEQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAAGXXXXXXXXXXXXXXXXSPNADGGGVKDEKGTAGASSPVLSEMDQ-LRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQQGFGGMGKPFQ----RRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEV 1134
            VPK R F+LL+ +R A ++    ++R  AV RR+ AL  +++ HPSQ+A+  Y S QPEL  E+VDL+R     A            Q  +P  + +LAV  L ALV  R G ++  L    R + V  ELG+ +GQY G+LP L+R+ ++ L                                             + +L +G+AF+EA+                                  +S P   +++Q L  ++ + +L  AVV+   G  A+ +CG+IP LL  V ++        G+    +     RYV+SQAVQ++E A V +  AL  F +L   +V+    S E+
Sbjct:  278 VPKERQFALLSDIRLAKSFHCR-DSRIKAVERRLRALIIMLHSHPSQDAITNYFSAQPELCAEVVDLIRPTVSGAHVAAHPTVENLLQNVIPYKVRLLAVEALTALVLRRDGLTNGALTGTTRLSSVLIELGVGKGQYLGVLPTLIRYSLSCLHTTD---------------------------------VPLTSPPENESLEIGVAFLEASAL------------------------------TSSSVPRKVQVEQALALIDNILTLTSAVVATPAGTTALVDCGIIPTLLTTVSVDPVHTLKELGVENDVRILCMLRYVISQAVQLLEGAFVTHGNALLTFHELSGLDVVMKVLSREI 573          
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Match: A0A7S4VU13_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VU13_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.350e-20
Identity = 109/388 (28.09%), Postives = 157/388 (40.46%), Query Frame = 1
Query:   61 STSAAMFRRLTKEH--TAVPKRRLFSLLARVRGAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQAA----------------------------------QMTVPLDISVLAVHCLAALVHTRSGASS-LGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASLFIMPEQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAAGXXXXXXXXXXXXXXXXSPNADGGGVKDEKGTAGASSPVLSEMDQ----LRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDG-QQGFGG-MGKPFQR--------------RYVVSQAVQIMETAV 1053
            ST+   F  + K      VP  + F+LLA++R A ++    ++R AAV RR+ AL  +++ HPSQ+ +  Y   QPEL  ELVDLVR     A+                                     VP     LA+  L ALV  + GA+  L  VAR  +V  ELG+ +GQY GLLP L+R+ +ASL     Q                                          L +G+AF++A                                      P L   +Q    L +++ V +L  AVVSV  G AA+T+CGLIPAL++ V L+    Q+  GG  G PF                +++ +QA+QI+E A+
Sbjct:  162 STAELFFNCIEKAGGWARVPWDKAFTLLAQLRLAKSFHSN-KSRVAAVERRLRALICVLHAHPSQDVISGYFQAQPELCAELVDLVRPTVSSASVSSAASLLSRKDFAIGDNGQDNDGRHAVIAAVADSSVVPYSARTLAIESLTALVARKDGANGGLTNVARQANVLGELGVGKGQYLGLLPTLIRYSLASLNSFLSQGKGDHGRGGTGKDQKITMADDVMAIADDDDDML--------GLGVGLAFLQAT-----------------------------------KPPALPRKEQEERALEFIDAVLTLTSAVVSVPSGTAALTDCGLIPALVSTVALDSHAAQKAEGGRQGSPFAPPIANEEESYSDCLLKFISAQAIQILEGAI 505          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12577.1969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G2U3_ECTSI2.610e-5797.06DUF913 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LD86_9PHAE4.240e-5175.33DUF913 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2VVZ5_9STRA3.260e-3131.47Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A448ZD07_9STRA2.040e-2529.58HECT-type E3 ubiquitin transferase n=1 Tax=Pseudo-... [more]
A0A7S4IYT2_9STRA1.400e-2433.41Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
B7G082_PHATC7.040e-2430.81HECT-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A7S2L793_9STRA2.730e-2327.11Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A1Z5KPP7_FISSO3.270e-2229.01HECT-type E3 ubiquitin transferase n=1 Tax=Fistuli... [more]
A0A1Z5JHS1_FISSO3.440e-2128.06HECT-type E3 ubiquitin transferase n=1 Tax=Fistuli... [more]
A0A7S4VU13_9STRA2.350e-2028.09Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12577contigE-fasciculatus_F_contig12577:11..3627 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.9
Seed ortholog evalue2.2e-51
Seed eggNOG ortholog2880.D7G2U3
KEGG koko:K10592,ko:K14772,ko:K17964,ko:K22370
KEGG Pathwayko04120,map04120
EggNOG free text desc.ubiquitin protein ligase activity
EggNOG OGsCOG5021@1,KOG0939@2759
EC2.3.2.26
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03029,ko04121
Hectar predicted targeting categoryother localisation
Exons7
Model size1245
Cds size1245
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927764.4281132-CDS-E-fasciculatus_F_contig12577:10..2601622927764.4281132-CDS-E-fasciculatus_F_contig12577:10..260Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 11..260 +
1695995684.3366542-CDS-E-fasciculatus_F_contig12577:10..2601695995684.3366542-CDS-E-fasciculatus_F_contig12577:10..260Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 11..260 +
1622927764.441566-CDS-E-fasciculatus_F_contig12577:669..8231622927764.441566-CDS-E-fasciculatus_F_contig12577:669..823Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 670..823 +
1695995684.3598416-CDS-E-fasciculatus_F_contig12577:669..8231695995684.3598416-CDS-E-fasciculatus_F_contig12577:669..823Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 670..823 +
1622927764.4610133-CDS-E-fasciculatus_F_contig12577:975..11831622927764.4610133-CDS-E-fasciculatus_F_contig12577:975..1183Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 976..1183 +
1695995684.368076-CDS-E-fasciculatus_F_contig12577:975..11831695995684.368076-CDS-E-fasciculatus_F_contig12577:975..1183Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 976..1183 +
1622927764.4738188-CDS-E-fasciculatus_F_contig12577:1571..18041622927764.4738188-CDS-E-fasciculatus_F_contig12577:1571..1804Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 1572..1804 +
1695995684.3763154-CDS-E-fasciculatus_F_contig12577:1571..18041695995684.3763154-CDS-E-fasciculatus_F_contig12577:1571..1804Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 1572..1804 +
1622927764.4866495-CDS-E-fasciculatus_F_contig12577:2257..23841622927764.4866495-CDS-E-fasciculatus_F_contig12577:2257..2384Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 2258..2384 +
1695995684.3925517-CDS-E-fasciculatus_F_contig12577:2257..23841695995684.3925517-CDS-E-fasciculatus_F_contig12577:2257..2384Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 2258..2384 +
1622927764.4987488-CDS-E-fasciculatus_F_contig12577:3056..31881622927764.4987488-CDS-E-fasciculatus_F_contig12577:3056..3188Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 3057..3188 +
1695995684.404409-CDS-E-fasciculatus_F_contig12577:3056..31881695995684.404409-CDS-E-fasciculatus_F_contig12577:3056..3188Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 3057..3188 +
1622927764.513203-CDS-E-fasciculatus_F_contig12577:3486..36271622927764.513203-CDS-E-fasciculatus_F_contig12577:3486..3627Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 3487..3627 +
1695995684.414466-CDS-E-fasciculatus_F_contig12577:3486..36271695995684.414466-CDS-E-fasciculatus_F_contig12577:3486..3627Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12577 3487..3627 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12577.1969.1prot_E-fasciculatus_F_contig12577.1969.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12577 11..3627 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12577.1969.1

>prot_E-fasciculatus_F_contig12577.1969.1 ID=prot_E-fasciculatus_F_contig12577.1969.1|Name=mRNA_E-fasciculatus_F_contig12577.1969.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=415bp
TIAQPARVEGPPAGEGGDADSTSAAMFRRLTKEHTAVPKRRLFSLLARVR
GAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQEL
VDLVRVRTDQAAQMTVPLDISVLAVHCLAALVHTRSGASSLGLVARHTHV
FQELGITRGQYTGLLPLLVRHGVASLFIMPEQDAAAAAAAASAGKSDGDS
GVVESKSSDPGDGKSPPPPRPDAALSLGIAFVEAAGAAQSKGRRDGGSGG
GGSPNADGGGVKDEKGTAGASSPVLSEMDQLRWVETVFSLVWAVVSVQHG
AAAMTECGLIPALLNVVQLNMDGQQGFGGMGKPFQRRYVVSQAVQIMETA
VVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAAAAAAAGDSRSGG
GGGGMVVDDPNGKAE
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mRNA from alignment at E-fasciculatus_F_contig12577:11..3627+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12577.1969.1 ID=mRNA_E-fasciculatus_F_contig12577.1969.1|Name=mRNA_E-fasciculatus_F_contig12577.1969.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3617bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12577:11..3627+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACGATTGCTCAGCCGGCGAGGGTGGAAGGCCCACCAGCAGGCGAAGGGGG AGACGCGGACAGCACTTCGGCAGCCATGTTCCGGCGATTAACCAAGGAGC ACACCGCCGTCCCGAAGAGGCGGCTGTTCTCCCTCCTGGCGAGGGTCAGG GGCGCCGTGGCGTGGCGCGGGGGTGTGGAGGCTCGACGGGCCGCGGTGCG GAGAAGGATCATGGCGCTGACGGCGCTTGTGTACTGTCATCCTTCCCAAG GTGTGTGAGGGGGCGGGGGGGGCGTACGAATATTGGCGCTGGGGGCCCGT AGGTAAGTCGGATGAGGTTGTAGAGTGGATTGCTGGGAAAGGCTGGTGGG GGTAGGGGGGGGCGGTAAGGGCGGGAGGGGTACAGAAGGGGTTATATATT TAGTGTTTCGTCTCGTTCCTCCGGGTTGGCAAGTTGCGAGGGTGGTGGTG GTTCGAATCGAGTTTTGTAGCCCGCTGAATTGCTTGTGTTCCTCAAAACT GGCTGTCTGCCTGTTTGCCTGTTTGACTAACTGCCGTGTCTCCGTCTCTC TGTCTGCCTGCCTGCCTGTCTGTCTCTCACTCTGTCTTTCTCTCTGTGTA TCTCTGTCTATTTCTCTCTGTCCATGTCTCTCTGTCTCTCTGCCTGCCTG TGGTCGCAGAGGCCCTCATGGCGTACATGAGCATCCAGCCGGAGCTCATC CAGGAGCTGGTGGATCTGGTCCGCGTGAGGACCGACCAGGCGGCGCAGAT GACGGTCCCGCTCGACATCTCCGTGCTGGCAGTGCACTGCCTGGCGGCGC TGGTGCACACGAGGTGAGTTAAGGACTACCGGTATGTTTTTTCATCACAA GCCAGTCGTCGCTGGTGCTGCAGCGTGTGTTTATCATGGGACTCGGCGTA GCTTTTGCTGCCGCTGATTCTACGGCCGCCTCCGCCGATGTTGCTGCTGC TGCTGGTGTGATCAGGAGCGGAGCGTCCAGCCTGGGCCTCGTTGCCCGAC ACACGCATGTCTTTCAGGAGCTCGGCATCACGAGAGGGCAGTACACGGGG CTGCTGCCGCTCCTCGTGCGGCACGGAGTAGCCTCGCTCTTCATCATGCC GGAGCAGGATGCCGCCGCCGCCGCCGCTGCCGCCAGTGCTGGAAAAAGTG ATGGCGATAGCGGTGTTGTAGAGGTAAGCTTTGGGTGAAACTCGTATTTA TATATTTTTGTCATGACTTCAAATCAGCGCTTGCAGCATTCGTGTCTAGA TCGTTGATTTAGCGGGGGGGGGGGGGAAGAAACACGTGTGGCCGCACACG ATACAAATATAAGAAGTATACTTGCTGTTCTGTTCCGTCTCCAAGCAAGA CATGCCGTGCAGGGAGTAAGCGAGCGCTGGAGAACCAACGCCAGCACCGG ATGCGTGCTTCTCGACAGATGCTACATGCCCCAATGTTGTTGAGCTTCGG TCCCCAGAAAGAACAGCCCCTTGCGTTTCTCCCCAACGGCAGCAGTACTG ATCGCCTCGTGCACAGAGCCCTAACACGCTCGCCTTACCCCCCTCCCACC CCACAAATCAGTCCAAGTCGTCGGACCCCGGGGATGGGAAGTCGCCGCCC CCCCCCCGACCGGACGCCGCACTGTCGCTCGGCATCGCCTTTGTGGAGGC CGCCGGCGCGGCCCAGTCAAAGGGGCGCCGCGATGGAGGGAGCGGGGGCG GGGGTTCTCCTAACGCCGACGGTGGGGGAGTTAAGGATGAGAAGGGGACG GCTGGCGCGAGTTCCCCGGTTCTGTCCGAGATGGACCAGCTGCGGTAAGG AAGATTGCTGGTATCGTGTTGTGGTGTGTTCTTGAGGACTTTTTGTTTGA CGTGGGTGGCGTGGCGGGAAGGGCAGTGGGGGGTCGAGCGGAGCGGGAGG GGGGTGGAGAGCGTTTCCTCAAGGCACGTCCTGGGTGGACCTACTTGGTG TGCGTGGACTCATGTTCCGACTGATTCTGACTTTCCGAAAGGAGTAACAC CTGTTGCCGTTGCCGTCCACAAGGCATGGAAGGGCACCCCGAAAGAACAG AGCGTACTGTCCATTCGCGTTTTTGTGTCCTTTTTGAAAGACTGACCACA TGTTCGTTGGACAGCCGGCTACGCTAGAGCAATCGATGGCCTCCTGTGTT ACATTGTCTGCCCCCCCTTTTTTTTGTTTCTGTTTGTTTGATGGCCCGTA CTATTATCTCCTTGTTGCTTGTTTGTGCGTTCGTCGGCGCAATCCAGCTG GGTCGAGACGGTGTTCAGCCTGGTTTGGGCGGTGGTGAGCGTGCAGCACG GCGCGGCGGCCATGACCGAGTGCGGGCTGATCCCGGCCCTTCTCAACGTG GTGCAGCTCAACATGGACGGGCAGGTGGGGCTCCGGCTGTGCCTTGGCGT GTGAAGGGCAGGGTGTCTTTTTCTTTGGGGACCCGCTGCCGCGTCGTCCC TGGTGTTTTGGTGTTCCACACCATTGTACCGTTTGGTCGACCATACCACT GTACCGTCGGGTCGACCATACCGCTGTCCCGTTGGGTCGAGATCCAACCG CGACCCCGTGTTGTGCTTGGTGTTCAAGATTCCGTTGACATGAGACCCAT CCATAGCCGTGCTTTGCTTTGTGTGACGTTGACGTTTTTTGGAAGACCCA GCCACAGCAGTCATTCTTGCGTTGTGTTGAAGTTGCCGTTGGTTGGAGAC CCACCCACAGCCGTGCTTTGTGTTCGGTTGCCGTTTGAGACCACTGCAGT CATGCATCGTGCTAACATTAACATTGACATTGCCGTTGGTGTTTAACATT AACATTGCCGTTGGTGTTTAACATTAACATTGCCGTTAGTGTTGAGACCC TCCCCACAATCGGGTGCTTCGCGTTGAAGCTGCCGTGAGTCTGAGAGCCA CCCACAGCAGCCTCGTGCGTGCTTTGGAGTTAAAGTCTCCGTTGATTTGA GCCCCCACCCCCCCACGTGTGCTGGTGGCTACTGCTGCCTTGGTGATCGA TTTTGTTGTTTGTGTCCTTGGTGGCTTGTTTCTTGCTTTGATCAAGCAGG GCTTCGGCGGCATGGGCAAGCCCTTCCAGCGGCGGTATGTGGTGTCGCAG GCGGTTCAGATCATGGAGACCGCAGTGGTGAACAACGCGGCCGCTCTCTC CGCCTTCAGGGATCTCGGCGCAGCCGAGGTGCGTCGGCGTTTTGTCCTGC GTTTGTAGGCAGGCTGTTCCTTGTTCTTCTTTTTTTTTCCATTGGCTCAT TTTGTCTTCAATTTTCCAACCCTCTCTTTGTTATTAATGCTTTTTTGGTC GTCGAATTCTCGCTGCTGCTCTGCTGCTGCTACTGCTGCTCTGCTGCTGC TGCTGCCGTCGTTCGTTAGCGGTCCCTGTCTCGTCCTTGTCAATGTATTT CGTTCGTTCATTGTGGTACCTCTCCGTGTCCCTCCCCCCCCCCTCTCTCC CGCCTACACTTCCGATACGACGACAGGTGCTCGCGTCCGCTTTTTCCACA GAGGTTGGAAGGCTTCGCGATGCCGGAGCGGCGGCGGCGGCGGCGGCGGC GGGGGATAGCCGTAGTGGTGGTGGTGGTGGCGGGATGGTGGTGGATGACC CCAATGGCAAAGCCGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12577:11..3627+

>mRNA_E-fasciculatus_F_contig12577.1969.1 ID=mRNA_E-fasciculatus_F_contig12577.1969.1|Name=mRNA_E-fasciculatus_F_contig12577.1969.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2490bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12577:11..3627+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACGATTGCTCAGCCGGCGAGGGTGGAAGGCCCACCAGCAGGCGAAGGGGG
AGACGCGGACAGCACTTCGGCAGCCATGTTCCGGCGATTAACCAAGGAGC
ACACCGCCGTCCCGAAGAGGCGGCTGTTCTCCCTCCTGGCGAGGGTCAGG
GGCGCCGTGGCGTGGCGCGGGGGTGTGGAGGCTCGACGGGCCGCGGTGCG
GAGAAGGATCATGGCGCTGACGGCGCTTGTGTACTGTCATCCTTCCCAAG
ACGATTGCTCAGCCGGCGAGGGTGGAAGGCCCACCAGCAGGCGAAGGGGG
AGACGCGGACAGCACTTCGGCAGCCATGTTCCGGCGATTAACCAAGGAGC
ACACCGCCGTCCCGAAGAGGCGGCTGTTCTCCCTCCTGGCGAGGGTCAGG
GGCGCCGTGGCGTGGCGCGGGGGTGTGGAGGCTCGACGGGCCGCGGTGCG
GAGAAGGATCATGGCGCTGACGGCGCTTGTGTACTGTCATCCTTCCCAAG
AGGCCCTCATGGCGTACATGAGCATCCAGCCGGAGCTCATCCAGGAGCTG
GTGGATCTGGTCCGCGTGAGGACCGACCAGGCGGCGCAGATGACGGTCCC
GCTCGACATCTCCGTGCTGGCAGTGCACTGCCTGGCGGCGCTGGTGCACA
CGAGAGGCCCTCATGGCGTACATGAGCATCCAGCCGGAGCTCATCCAGGA
GCTGGTGGATCTGGTCCGCGTGAGGACCGACCAGGCGGCGCAGATGACGG
TCCCGCTCGACATCTCCGTGCTGGCAGTGCACTGCCTGGCGGCGCTGGTG
CACACGAGGAGCGGAGCGTCCAGCCTGGGCCTCGTTGCCCGACACACGCA
TGTCTTTCAGGAGCTCGGCATCACGAGAGGGCAGTACACGGGGCTGCTGC
CGCTCCTCGTGCGGCACGGAGTAGCCTCGCTCTTCATCATGCCGGAGCAG
GATGCCGCCGCCGCCGCCGCTGCCGCCAGTGCTGGAAAAAGTGATGGCGA
TAGCGGTGTTGTAGAGGAGCGGAGCGTCCAGCCTGGGCCTCGTTGCCCGA
CACACGCATGTCTTTCAGGAGCTCGGCATCACGAGAGGGCAGTACACGGG
GCTGCTGCCGCTCCTCGTGCGGCACGGAGTAGCCTCGCTCTTCATCATGC
CGGAGCAGGATGCCGCCGCCGCCGCCGCTGCCGCCAGTGCTGGAAAAAGT
GATGGCGATAGCGGTGTTGTAGAGTCCAAGTCGTCGGACCCCGGGGATGG
GAAGTCGCCGCCCCCCCCCCGACCGGACGCCGCACTGTCGCTCGGCATCG
CCTTTGTGGAGGCCGCCGGCGCGGCCCAGTCAAAGGGGCGCCGCGATGGA
GGGAGCGGGGGCGGGGGTTCTCCTAACGCCGACGGTGGGGGAGTTAAGGA
TGAGAAGGGGACGGCTGGCGCGAGTTCCCCGGTTCTGTCCGAGATGGACC
AGCTGCGTCCAAGTCGTCGGACCCCGGGGATGGGAAGTCGCCGCCCCCCC
CCCGACCGGACGCCGCACTGTCGCTCGGCATCGCCTTTGTGGAGGCCGCC
GGCGCGGCCCAGTCAAAGGGGCGCCGCGATGGAGGGAGCGGGGGCGGGGG
TTCTCCTAACGCCGACGGTGGGGGAGTTAAGGATGAGAAGGGGACGGCTG
GCGCGAGTTCCCCGGTTCTGTCCGAGATGGACCAGCTGCGCTGGGTCGAG
ACGGTGTTCAGCCTGGTTTGGGCGGTGGTGAGCGTGCAGCACGGCGCGGC
GGCCATGACCGAGTGCGGGCTGATCCCGGCCCTTCTCAACGTGGTGCAGC
TCAACATGGACGGGCAGCTGGGTCGAGACGGTGTTCAGCCTGGTTTGGGC
GGTGGTGAGCGTGCAGCACGGCGCGGCGGCCATGACCGAGTGCGGGCTGA
TCCCGGCCCTTCTCAACGTGGTGCAGCTCAACATGGACGGGCAGCAGGGC
TTCGGCGGCATGGGCAAGCCCTTCCAGCGGCGGTATGTGGTGTCGCAGGC
GGTTCAGATCATGGAGACCGCAGTGGTGAACAACGCGGCCGCTCTCTCCG
CCTTCAGGGATCTCGGCGCAGCCGAGCAGGGCTTCGGCGGCATGGGCAAG
CCCTTCCAGCGGCGGTATGTGGTGTCGCAGGCGGTTCAGATCATGGAGAC
CGCAGTGGTGAACAACGCGGCCGCTCTCTCCGCCTTCAGGGATCTCGGCG
CAGCCGAGGTGCTCGCGTCCGCTTTTTCCACAGAGGTTGGAAGGCTTCGC
GATGCCGGAGCGGCGGCGGCGGCGGCGGCGGCGGGGGATAGCCGTAGTGG
TGGTGGTGGTGGCGGGATGGTGGTGGATGACCCCAATGGCAAAGCCGAGG
TGCTCGCGTCCGCTTTTTCCACAGAGGTTGGAAGGCTTCGCGATGCCGGA
GCGGCGGCGGCGGCGGCGGCGGCGGGGGATAGCCGTAGTGGTGGTGGTGG
TGGCGGGATGGTGGTGGATGACCCCAATGGCAAAGCCGAG
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