mRNA_E-fasciculatus_F_contig12566.1964.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12566.1964.1
Unique NamemRNA_E-fasciculatus_F_contig12566.1964.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: D7G1P4_ECTSI (Biopterin transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.020e-124
Identity = 182/203 (89.66%), Postives = 193/203 (95.07%), Query Frame = 1
Query:    1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            +R   SL GS MGLLLYNK+EWGWGLSIQQLFFLNAIFPVLFMGPWV SLRETAVVTDGN+P++QRLR+QCTEVFRALEQKAVYGPMG+IFIYNL QVPNAAWRSFLV GLSF+NF+LG+L VIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDL FS+GDDCIADFVSSIQFLPVVQM
Sbjct:  215 VRFVGSLLGSTMGLLLYNKDEWGWGLSIQQLFFLNAIFPVLFMGPWVWSLRETAVVTDGNVPIEQRLRQQCTEVFRALEQKAVYGPMGLIFIYNLLQVPNAAWRSFLVIGLSFSNFELGVLGVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLVFSVGDDCIADFVSSIQFLPVVQM 417          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A835Z8G1_9STRA (Biopterin transport-related protein BT1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G1_9STRA)

HSP 1 Score: 222 bits (565), Expect = 3.650e-67
Identity = 106/198 (53.54%), Postives = 145/198 (73.23%), Query Frame = 1
Query:   16 SLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            SL GS +G  +YNKE WGWG++I ++F LN +FP+L + P++ +LRE+A V          LR QC  +F AL  ++V+ PM ++F YNLFQVPNAAWRSFLV+GL F +F LG++ ++GSL +S GL+AYK+ F  + WR +Y  TT +  FFS  Q+LLI RVN+ FG+GDLAF++GDD +A+FVS+IQFLPV QM
Sbjct:  154 SLLGSVLGTCVYNKERWGWGMTIGEVFLLNGLFPLLVVAPFMWTLRESAYVPRPGDRAAA-LRAQCDAIFTALSLRSVFVPMAVVFTYNLFQVPNAAWRSFLVEGLKFESFDLGLIGIVGSLFSSCGLIAYKRCFMGTGWRTIYRVTTTLTCFFSVVQLLLIFRVNQRFGVGDLAFALGDDALAEFVSAIQFLPVCQM 350          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK)

HSP 1 Score: 197 bits (502), Expect = 2.610e-57
Identity = 91/203 (44.83%), Postives = 146/203 (71.92%), Query Frame = 1
Query:    1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            +R   S+ GSAMG +LYN++ WGWGL+  Q+F LNA  P + + P +  LR+ + +    +P+      QC E++ A++++ ++ PM  IF YN+ Q+PNAAW SFL+ GL+F++F +G++SV GS+++ LGL+ YKK+FF+++WR +Y+WTTLI  FFS  Q++LI ++N+ +GI +L F++GDD  A+F+ +IQFLP+  M
Sbjct:  205 IRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYLRDASDLKPIPVPI------QCREIWGAVQKRNIWQPMAFIFAYNVMQIPNAAWSSFLIDGLNFSDFSIGVISVTGSVVSWLGLVVYKKFFFNTNWRGIYLWTTLITMFFSVLQLVLIFQLNQKWGIPNLWFALGDDAAAEFILAIQFLPMCIM 401          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.250e-50
Identity = 90/204 (44.12%), Postives = 134/204 (65.69%), Query Frame = 1
Query:    1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMF-GIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            +R   S+ G   G LLYN   WGWGL+  Q+  +N + P++ + P ++ L E       ++P      +QC +V+  +EQ+AV+ PM  I++YNL QVPN AW SFL  GL F  + +G+LS  G+LM+  G+LAYK++FF SSW+ +Y+W+T++V+FFS  QI LI RVN+ + G+ D  F++GD+ IA ++S IQFLPV  M
Sbjct:  193 VRFGGSVAGCLGGTLLYNSTNWGWGLTFPQVCLVNGVLPLVVLLPLLIPLWERQGSQGKSVP------QQCKDVWGTIEQRAVWQPMAFIYLYNLLQVPNVAWGSFLQLGLGFQAYGIGMLSTAGALMSFFGILAYKRFFFKSSWQGIYIWSTILVAFFSLCQIALIFRVNETWLGLSDYWFALGDNVIAAYISGIQFLPVCAM 390          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A1Z5K9Z9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9Z9_FISSO)

HSP 1 Score: 174 bits (442), Expect = 1.670e-47
Identity = 81/198 (40.91%), Postives = 137/198 (69.19%), Query Frame = 1
Query:   16 SLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            S  G+ +G L+YNK++W W L I+ +FF+NA FP++F+ P+V  L E  + TD    + +   +QC E+F   + +AV+ PM  +++YN  Q+ NAAW +FLV+GL F+ +Q+G++S++GS+M+  G++ Y+++FF S+WR +Y W T + S  +  Q++L+  VN+ +GI D+ FS+GDD + +FV ++QFLP+  M
Sbjct:  359 STVGATIGALVYNKDDWDWSLPIRLIFFINAAFPLIFLLPFVPYLLE--LETDC---LPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNALQLTNAAWMNFLVEGLKFSAWQIGLVSIVGSIMSWFGIMTYERFFFASNWRIVYFWCTTLASAIALGQLILVFGVNRQWGIPDIWFSMGDDVLVEFVIAVQFLPMCIM 551          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A7S1FNC7_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNC7_9STRA)

HSP 1 Score: 171 bits (432), Expect = 7.850e-46
Identity = 81/198 (40.91%), Postives = 132/198 (66.67%), Query Frame = 1
Query:   16 SLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            S+ G+ +G ++YNK++W + L I  +FF+NA FP++F+ P V  L E     +    V Q     C ++F   + KAV+ PM  ++IYN  Q+ NAAW +FLV+GL F+ + +GI+ ++GS+MA  G++ Y+K+FF S+WR +Y+W T I +  +  QI+L+  +N+ FG+ D+AFS+GDD + +FV ++QFLP+  M
Sbjct:  443 SVIGATIGAVVYNKDDWKFYLPISLVFFINAAFPMIFLLPLVPFLMEIETQCEPRNFVTQ-----CKDLFHTAQLKAVWQPMTFVYIYNAMQLANAAWMNFLVEGLKFSAWMIGIVGIVGSIMAWFGIMTYEKYFFGSNWRIVYLWCTTIAAIIAIAQIILVFGLNRKFGLSDIAFSMGDDILIEFVIAVQFLPMCIM 635          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A7S1TWA3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWA3_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.310e-45
Identity = 83/203 (40.89%), Postives = 130/203 (64.04%), Query Frame = 1
Query:    1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            LR   S+ G+  G L+YNK+ WGWGLS  Q+ F+  +FP+LF+ P+   + E  +   G   V     EQC +++  +   AV+ PM  ++IYN+ Q+PN AW SFL   L F  + LGI++  G++M  LG++A+KK+FF +SWR +Y+ +TL+ + FS  Q++LI  +N+  GI D  F++GDD ++ +++ IQFLPV  M
Sbjct:  284 LRFFGSVLGAGTGTLVYNKDAWGWGLSFAQVCFVLGVFPLLFVVPFAYMVWEKPLSEAGAKSVP----EQCRDIWNTVTLDAVWMPMTFVYIYNVMQIPNVAWSSFLQLDLGFPPWALGIMTTTGAIMTFLGIVAFKKFFFKTSWRYIYISSTLLCTTFSLLQLVLIFHLNRGLGISDYFFALGDDVMSAYINGIQFLPVCIM 482          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: W7TKM6_9STRA (Folate biopterin transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM6_9STRA)

HSP 1 Score: 159 bits (401), Expect = 4.870e-42
Identity = 73/198 (36.87%), Postives = 127/198 (64.14%), Query Frame = 1
Query:   16 SLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            ++ G+ +G +LYN++EW WGLSI  ++ LN +  V+ + P+   L +   V +        L+EQ  ++++ ++++ +Y PM  I +YN+  +PNAAW +FL+ GL FT + LGI+ ++ ++ + LG+  Y+ +    SWR +Y+ +T +  FFS  Q+ LI R+N  +GI DL F++GDD  A+F++++QFLP V M
Sbjct:  281 NVVGATLGTILYNEKEWHWGLSISSIYLLNGLAAVVLVLPFTYHLSDPNQVLEAR-----SLKEQLGDIWKMVQRRTIYVPMSFIAVYNMLLIPNAAWSNFLILGLKFTPWMLGIMFIVATVFSWLGITFYRAFLMPYSWRWVYIISTSLTVFFSVLQLSLIFRLNARWGIPDLIFALGDDAAANFITALQFLPAVTM 473          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A7R9U5H3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H3_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.570e-41
Identity = 75/203 (36.95%), Postives = 126/203 (62.07%), Query Frame = 1
Query:    1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            LR   S+ G++ G + +N + WGWGL+  ++  +    P+  + P    + E  +   G   V     EQC +++  ++ KAV+ PM  ++ YN+ Q+PN AW SFL  GL F  + LGI+S  G++M  LG++A+K++FFH+SWR +Y+ +T + + FS  Q++LI  +N+ +G+ D  F++GDD +A +++ IQFLPV  M
Sbjct:  281 LRFVGSVLGASSGTVFFNAKAWGWGLTFGEVCLILGALPLFSVVPLAFFVWEKPIHEKGCKSVV----EQCQDIWETVQLKAVWKPMAFVYTYNILQIPNVAWSSFLQIGLDFKPWALGIMSTAGAIMTLLGIMAFKRFFFHTSWRYIYISSTCLSAAFSLLQLVLIFHLNRAWGLSDYFFALGDDVMAAYINGIQFLPVCIM 479          
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A836CBB7_9STRA (Folate-biopterin transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB7_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.540e-40
Identity = 75/204 (36.76%), Postives = 123/204 (60.29%), Query Frame = 1
Query:    1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVN-KMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
            +R   S+ G  MG ++YN+ +WGWGLS +Q+  L    P++ +G  + +L E A          + + +QC +++  +  KAV+ PM  ++++N FQVPN AW+SFL   L F  + LG+++  G++M  LG++AYKK+FFH SWR +Y  +  + + F   Q+ LI + N K   + +L F++GDD I  ++  +QFLPV  M
Sbjct:  185 VRFMGSVLGCLMGAVVYNQVQWGWGLSFRQVCLLTGALPLMLLGTTLWTLYEMAATP-------KTVAQQCGDIWDTICLKAVWKPMAFVYVFNFFQVPNIAWQSFLQLSLHFEPYMLGLMATAGAVMTLLGIIAYKKFFFHVSWRHIYFTSVCVTTAFKLLQMCLIFKWNEKYLHMSNLYFALGDDVITQYIQGVQFLPVCIM 381          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1P4_ECTSI1.020e-12489.66Biopterin transport-related protein BT1 n=2 Tax=Ec... [more]
A0A835Z8G1_9STRA3.650e-6753.54Biopterin transport-related protein BT1 n=1 Tax=Tr... [more]
A0A6V1WMI5_HETAK2.610e-5744.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XY88_9STRA1.250e-5044.12Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z5K9Z9_FISSO1.670e-4740.91Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1FNC7_9STRA7.850e-4640.91Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A7S1TWA3_9STRA2.310e-4540.89Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TKM6_9STRA4.870e-4236.87Folate biopterin transporter n=2 Tax=Monodopsidace... [more]
A0A7R9U5H3_9STRA1.570e-4136.95Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A836CBB7_9STRA2.540e-4036.76Folate-biopterin transporter n=1 Tax=Tribonema min... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12566contigE-fasciculatus_F_contig12566:455..3844 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.1
Seed ortholog evalue1.7e-100
Seed eggNOG ortholog2880.D7G1P4
EggNOG free text desc.BT1 family
EggNOG OGs29S8M@1,2RXD7@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBiopterin transport-related protein BT1
Ec32 orthologEc-10_000510.1
Exons5
Model size609
Cds size609
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12566.1964.1prot_E-fasciculatus_F_contig12566.1964.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12566 455..3844 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927762.9077597-CDS-E-fasciculatus_F_contig12566:454..5571622927762.9077597-CDS-E-fasciculatus_F_contig12566:454..557Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 455..557 -
1695995684.0783923-CDS-E-fasciculatus_F_contig12566:454..5571695995684.0783923-CDS-E-fasciculatus_F_contig12566:454..557Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 455..557 -
1622927762.9197555-CDS-E-fasciculatus_F_contig12566:1402..15571622927762.9197555-CDS-E-fasciculatus_F_contig12566:1402..1557Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 1403..1557 -
1695995684.1036494-CDS-E-fasciculatus_F_contig12566:1402..15571695995684.1036494-CDS-E-fasciculatus_F_contig12566:1402..1557Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 1403..1557 -
1622927762.934178-CDS-E-fasciculatus_F_contig12566:1943..20031622927762.934178-CDS-E-fasciculatus_F_contig12566:1943..2003Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 1944..2003 -
1695995684.1190934-CDS-E-fasciculatus_F_contig12566:1943..20031695995684.1190934-CDS-E-fasciculatus_F_contig12566:1943..2003Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 1944..2003 -
1622927762.9487062-CDS-E-fasciculatus_F_contig12566:3000..30811622927762.9487062-CDS-E-fasciculatus_F_contig12566:3000..3081Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 3001..3081 -
1695995684.1322105-CDS-E-fasciculatus_F_contig12566:3000..30811695995684.1322105-CDS-E-fasciculatus_F_contig12566:3000..3081Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 3001..3081 -
1622927762.9647222-CDS-E-fasciculatus_F_contig12566:3634..38441622927762.9647222-CDS-E-fasciculatus_F_contig12566:3634..3844Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 3635..3844 -
1695995684.1458657-CDS-E-fasciculatus_F_contig12566:3634..38441695995684.1458657-CDS-E-fasciculatus_F_contig12566:3634..3844Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12566 3635..3844 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12566.1964.1

>prot_E-fasciculatus_F_contig12566.1964.1 ID=prot_E-fasciculatus_F_contig12566.1964.1|Name=mRNA_E-fasciculatus_F_contig12566.1964.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=203bp
LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSL
RETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPN
AAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYV
WTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPV
VQM
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mRNA from alignment at E-fasciculatus_F_contig12566:455..3844-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12566.1964.1 ID=mRNA_E-fasciculatus_F_contig12566.1964.1|Name=mRNA_E-fasciculatus_F_contig12566.1964.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3390bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12566:455..3844- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCCGTTTGCCCCCCAGCCTAACGGGAAGCGCGATGGGCCTGTTGCTGTA CAACAAGGAGGAGTGGGGGTGGGGCTTGTCGATCCAGCAGCTCTTCTTCT TGAACGCCATCTTCCCTGTGCTGTTCATGGGGCCATGGGTGTTGTCACTG AGGGAGACGGCTGTGGTTACGGACGGCAACATCCCCGTCAAGCAACGGCT GAGGGAGCAGGTGGGTTGGCTGCTTTTTTATTTATTTTTTTGCTTTTCGT AAGGAGGGGAGAAGCCGCAGGACGGGTCGCGAACCTGCCCTTCCGCTTCC CCCCCCCGCCGACCTACCAAACTCAACCATGTTTTTTACCGCATATGACG CAACATAACAACCCCACGTATGGTTGTACACACACCACCCAATACCACAC CCGCCAAAGGTGGGAGAAGTTATGTTTGTAGATCGCATAACACCACAAAA TACCGCATGCGGCGGAACCGCCACAATATATATTTGTGGAAAACCCGTGG TATTCCATATATACTGGAAAGCAATGGTACATCTGCATGGGTAAAAAAGT GGAATGCTGCTATCGCATTTGAAACGTCTTGACATCTCTCCCCTACTTAT ATGGCCGCATAGTCCGTTGGCCTAACCCTCAAGCCCCCGTCACCACCAGC GCGCCTACTTAAAATCGCCCATCGAGCCCTTTCTCCCACCACAAAGCTGA CCCGTTTTCTCCGACCGTTCTGTGGACCGTTCTGTGGACTGTTCCGTCGG TCGTTCCTGGCAGTGCACGGAAGTGTTCCGAGCGTTGGAGCAGAAGGCGG TGTACGGGCCGATGGGGATTATCTTCATATACAACTTATTCCAGGTACTG TACCCGTTTTTTTGTTTCTGCTTTTCTCGTGTGACTGAGTTATTTTGCCT TTGTTTTGGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTGTGAAA TGGCTCGTGGAAGACGAATGCTCCAGAATCTTACACGTGCCCATACAATC ATACGCGAGGGTATGGACACACGACTTACGACGCAACGATGATACATTAC TGACGAGTGTGTGTGTGTTATTCTCTTTCTGAAGACTACGTAGTCGGAAC TGCAAGTGGAACTGAAGTCACGTGGAAATAATGAAGACATTTGATAGCGA TTTTTTGTTTTTGTCAGCAGAACACGGAGGTAACAGCTGAGCCTTCGTTG CGTTGAAAATACCATTTGATCGCAAACACCGCAGCGGGGAAAGTGTGTGC CTTCCTCCGGTGTTTCCCCACCTGGTGCCTCAGAAATGCACACCGCAAGG TGGGTGGACTGCCGCCCATACAATAATATAGACCTCCATAAGGCGGGCGT GTATGCGCCAGACCGACTCACCCGGGCAGCCGCGTTACTCAATGTGTAGA ACAAGTTGATTATCCCGTCTGTGCCATCAAACTTCACCCGATTCACCCGC CTTACATGGGGCACCCGCCTACCGTATATGACACAAGATAACACACCCCC GGTGATACATTTTTGGCCTTAAAAGTATTATCACCGGGTGTGGTATCCTG TGGGGGGTGTGCTTTCTTATGTAGGTGTGTTATCTTGTGTCATATACGGT AATGTATCCCGCGTTATCGAGGGTACGACGGTACTGTAGTAGAATGAACG AACAGCGACTGGATTCCGTGAGGGGAGCTCAGCCGTCATGACGATTTGGT GCTCAAGTGCTTCTTTCGGATGGACACGATGCTCAGCTTCGAATGGCGTG CGGGTTCTGTATCGGAATGAAAGACTGCTTCGCTTGCCATCCATTTTTCC CGGCAAACCTCTCCTCCCGGACGGTCTGCGTTTTGGTGCAGGTGCCGAAC GCTGCGTGGAGATCGTTCCTCGTGAAAGGGCTGTCTTTCACCAACTTTCA GGTAACTGTTCTTCGTCTTTTGACTTGAACTGTTAAACGCCCACGGTATC TCAGCTCATTCTCCGACATCAAAGACGTTGTATATAAGCGTCCACACTTG AACGTCGCGTTTGATGTATCCGAGCTGTAAGTAATTTTTGCCTCCGCACG CCCAACGTATAAATGTACAGTAGCGTTCGTGGCACGTCAATATTGGAATA GAAATTTGCAGCCATGGGAATACCCGTGGTTGTGGACGTGCATCCCGTAC GTTCCCTCTCTTCCGCCACGGCTCTGTGCCTGCAGTTTGTTGGTGTGATG CGACTGACGCACGCTCGACCTTCCTCTCCTTTGTCGTCACCGCTGCCTGC CGCCTGCGGTTCTGCTATCTAAACCTCCTTTTTTTAGCTCGGTATCCTTA GCGTGATCGGTTCGCTGATGGCGAGCTTGGGGCTGCTAGCGTACAAGAAG TGGTTCTTCCACTCAAGCTGGCGGAAGCTGTACGTTTGGACGACGCTGAT TGTCTCGTTCTTCAGCGCCTTCCAGATTCTGCTCATCTTGAGGTGAGACC TGCCTGCCCTACCAGGCAAGGTTCATGTCTCGACTCCCGATGCAATGATT TTTTTTCTTGGTTAAGCAGTCGGATAAATATATACATATATTCCTTTTTG TCTTAGTCCTTGTTGATAGTTGGACTCTTAGCTGTCGCTGTACAAGTCGG CTGTACCAGGACTCGCTGTTTCCGTGTGTACCGCCTTAGGCAGGTGGTCG GTATCTTGAAGCATGGACTGTCCTATTTAGTCGAACATTGTTGATGGTTT TGTCCTTTTTCGCGAACAATGAGCCCATACTGGGGACACACGTCTATCGC AACATGGCACATTCTCTTTTAAAATTTGTTTTTTTCGGTTTCGGGTGGTT TGGGAGGCGTTTCTATGCTCCACGACTGAAACGCATTCTTGCCACTTGTC CAAATACATTATTCGTCCGTGATTTCCTGTTGTTGTTTACAATACTCGAA CAAGAGCGTGGATGTATTGGACGGGTGATTCCCAATTGGTGTGATTTTTT ATTTTTGTTCCTCGTCACCGGTGTGCACATCTAGGCTTGATCTCCACCTC TATGTCGGCAATCATGGGTCTATTTATCATTTATCACCTCTTGGAGCGAT AAAGGTTGCCGTGGTTCAACCCCCCCCCCTCCCGTGGAAGCGGCTCGCTA ACACCGCCTTACCAAGATGCGTCCAGCGGGGCAACGCAAGCTTAATCGCA ATAGTCCTACTTGTCCCTACCCAGCTTTGTTACTGCAACCGAAGGCCTAT GGCCTGGTAGTGACTACACCGCGCTCATTCTGCTGAGCCCCCCCCCTCCC CGACGAACCTATTCTTTGGCGCGGGCTTGGCTGCCAGGGTGAACAAGATG TTCGGTATCGGTGACCTGGCCTTCTCCATAGGGGACGACTGCATCGCCGA CTTCGTGTCGAGCATACAGTTTCTTCCCGTGGTTCAGATG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12566:455..3844-

>mRNA_E-fasciculatus_F_contig12566.1964.1 ID=mRNA_E-fasciculatus_F_contig12566.1964.1|Name=mRNA_E-fasciculatus_F_contig12566.1964.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1218bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12566:455..3844- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCCGTTTGCCCCCCAGCCTAACGGGAAGCGCGATGGGCCTGTTGCTGTA
CAACAAGGAGGAGTGGGGGTGGGGCTTGTCGATCCAGCAGCTCTTCTTCT
TGAACGCCATCTTCCCTGTGCTGTTCATGGGGCCATGGGTGTTGTCACTG
AGGGAGACGGCTGTGGTTACGGACGGCAACATCCCCGTCAAGCAACGGCT
GAGGGAGCAGCTCCGTTTGCCCCCCAGCCTAACGGGAAGCGCGATGGGCC
TGTTGCTGTACAACAAGGAGGAGTGGGGGTGGGGCTTGTCGATCCAGCAG
CTCTTCTTCTTGAACGCCATCTTCCCTGTGCTGTTCATGGGGCCATGGGT
GTTGTCACTGAGGGAGACGGCTGTGGTTACGGACGGCAACATCCCCGTCA
AGCAACGGCTGAGGGAGCAGTGCACGGAAGTGTTCCGAGCGTTGGAGCAG
AAGGCGGTGTACGGGCCGATGGGGATTATCTTCATATACAACTTATTCCA
GTGCACGGAAGTGTTCCGAGCGTTGGAGCAGAAGGCGGTGTACGGGCCGA
TGGGGATTATCTTCATATACAACTTATTCCAGGTGCCGAACGCTGCGTGG
AGATCGTTCCTCGTGAAAGGGCTGTCTTTCACCAACTTTCAGGTGCCGAA
CGCTGCGTGGAGATCGTTCCTCGTGAAAGGGCTGTCTTTCACCAACTTTC
AGCTCGGTATCCTTAGCGTGATCGGTTCGCTGATGGCGAGCTTGGGGCTG
CTAGCGTACAAGAAGTGGTTCTTCCACTCAAGCTGGCGGAAGCTGTACGT
TTGGACGACGCTGATTGTCTCGTTCTTCAGCGCCTTCCAGATTCTGCTCA
TCTTGAGCTCGGTATCCTTAGCGTGATCGGTTCGCTGATGGCGAGCTTGG
GGCTGCTAGCGTACAAGAAGTGGTTCTTCCACTCAAGCTGGCGGAAGCTG
TACGTTTGGACGACGCTGATTGTCTCGTTCTTCAGCGCCTTCCAGATTCT
GCTCATCTTGAGGGTGAACAAGATGTTCGGTATCGGTGACCTGGCCTTCT
CCATAGGGGACGACTGCATCGCCGACTTCGTGTCGAGCATACAGTTTCTT
CCCGTGGTTCAGATGGGTGAACAAGATGTTCGGTATCGGTGACCTGGCCT
TCTCCATAGGGGACGACTGCATCGCCGACTTCGTGTCGAGCATACAGTTT
CTTCCCGTGGTTCAGATG
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