mRNA_E-fasciculatus_F_contig1253.1945.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1253.1945.1
Unique NamemRNA_E-fasciculatus_F_contig1253.1945.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: D8LHI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI4_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 2.070e-169
Identity = 238/254 (93.70%), Postives = 244/254 (96.06%), Query Frame = 1 
Query:    1 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLTEGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIEGLRRAGVGNLDEPILTEEADAFKDWYGDESLTIAPKIEGDKPAAVVAVPMA 762
            SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLT+GWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISA FTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDL V TTA+CWDHADQWHYMTAYL+MAVVFVAIEG+RRAGVGNLDEPILTEEADAFKDWYGDE  T  PK+E DK  AVV+VPMA
Sbjct:  337 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLTDGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISACFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLEVVTTASCWDHADQWHYMTAYLMMAVVFVAIEGVRRAGVGNLDEPILTEEADAFKDWYGDEPPTTGPKVEEDKSVAVVSVPMA 590
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A1Z5K0X1_FISSO (Putative MFS transporter, AGZA family, xanthine/uracil permease n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0X1_FISSO)

HSP 1 Score: 227 bits (579), Expect = 2.710e-66
Identity = 118/239 (49.37%), Postives = 155/239 (64.85%), Query Frame = 1 
Query:    1 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLTEGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIEGLRRAGVGNLDEPILT----EEADAFKDWYGDESLT 705
            S+ NGL+Y  LSWFG++A I+SIVN  TIGPIVLFVGL + EEC  F+P+RHYAA + GLFPSI DWV N++ R PL   A    D NTN P   +GW+GIL  KRGA+LVS  WVA+LV +IDR+W +A+ W++++AGF+  GIIH+P AG +  +    + C             +CW+H +QW Y  AYL+ A +FV IE  RR+G   LDE +L       +D FKDW+ D   T
Sbjct:  446 SMANGLIYFILSWFGILAFIQSIVNVATIGPIVLFVGLAINEECLNFIPSRHYAAYIVGLFPSIFDWVVNVSNRSPLGNDA----DGNTNFPG-GDGWFGILAWKRGALLVSFVWVAILVSVIDRQWNKATFWSLLAAGFSLFGIIHMPEAGLEKLSEPFWEQC---------PAGGSCWEHGEQWMYFVAYLMFAGIFVLIELARRSG---LDEQLLPGLEDPTSDEFKDWFRDAEKT 667
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A448ZC90_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC90_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.430e-56
Identity = 102/231 (44.16%), Postives = 145/231 (62.77%), Query Frame = 1 
Query:    1 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLTEGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIEGLRRAGVGNLDEPILTEEADAFKDWYGD 693
            SL+NG+ YL  SWFG++ALI+SIVNQPTIGPIV FVGL + EE   F+P+R YAA + GLFPS+ DW+ N++AR PL    +D   Y+ +    +  W G+L  K G++LVSL W ++LV++IDR+W  A++W+VI++ F   GIIH   AGF +F S     C             TCW++++QW   TAYL++A  FV +  + +     + +PI  E   AF DW+ D
Sbjct:  372 SLVNGVTYLIFSWFGILALIQSIVNQPTIGPIVFFVGLQVNEEALNFMPSRQYAAYIIGLFPSVYDWLVNVSARSPLI---DDTFSYDISSVQ-SPTWMGVLNWKNGSLLVSLLWTSILVNVIDRQWVSAAIWSVIASLFAVFGIIHSFSAGFSNFNSPSWQYCWDAD--------GTCWEYSEQWMEFTAYLMVAATFVILHFVSKHDE-QMKDPIDDESRHAFDDWFKD 589
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A7S4EKF1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKF1_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.440e-55
Identity = 102/231 (44.16%), Postives = 142/231 (61.47%), Query Frame = 1 
Query:    1 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLTEGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIEGLRRAGVGNLDEPILTEEADAFKDWYGD 693
            SL NG+ YL  SWFG++ALI+SIVNQPTIGPIV FVGL + EE   F+P R YAA + GLFPS+ DW+ NI+ R PL+   +D   Y+ +    +  W G L  K G++LVSL W ++LV++IDR+W  A++W+VI++ F   GIIH   AGF +F+S     C              CW++++QW   TAYL+MA  FV +  + +     + +PI  E   AF DW+ D
Sbjct:  375 SLANGVTYLLFSWFGILALIQSIVNQPTIGPIVFFVGLQVNEEALNFMPNRQYAAYIIGLFPSVYDWLVNISGRSPLS---DDTFSYDISSAG-SAAWMGALNWKNGSLLVSLLWTSILVNVIDRQWVSAAIWSVIASLFAVFGIIHSFSAGFTNFSSVPWQYC--------YGGDGFCWEYSEQWMQFTAYLMMAATFVILHFISKYD-DQMKDPIDDESRHAFDDWFKD 592
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A7S2K3Q3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3Q3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 5.330e-47
Identity = 87/195 (44.62%), Postives = 118/195 (60.51%), Query Frame = 1 
Query:   82 TIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPD-LTEGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIEGLRRAGVGNLDEPILTEE 663
            TIGPIVLF+GLM+ EE  R +  RHY+A + GLFPSI DW   ++ R P+        D N  L D + + ++G+L  K+G++L+SL WV ML+++IDRKW  A+VWA I A F A GIIHVP AGF+ F +   + C    +         CW + +QW Y  AY+IMAV F+AIE +R      +  P LT E
Sbjct:    2 TIGPIVLFIGLMINEEALRCINPRHYSAFIVGLFPSIYDWAVIVSGRSPIIV-----NDVNVALDDNVFDNFFGVLAWKQGSVLISLIWVCMLMYVIDRKWLSATVWATIGALFAASGIIHVPKAGFESFVAPESEQCRSEEE---------CWQYGEQWMYFLAYIIMAVTFLAIEIIRSFVDDEMLLPPLTNE 182
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A7S2UIB7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIB7_9STRA)

HSP 1 Score: 163 bits (412), Expect = 3.030e-46
Identity = 86/199 (43.22%), Postives = 116/199 (58.29%), Query Frame = 1 
Query:  115 MLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLTEGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIEGLRRAGVGNLDEP-ILTEEADAFKDWYGDESLTI 708
            M+ EE    +P+RHYAA + GLFPS+ DWVTN+   GP+      G    T LP     W+G+L  KRGA+LVS  WVAMLV +IDRKW +A+VW+ + A F   GIIHVP AGF +F + V + C        V++   CWD A+Q+ +  AYL++   F  IE  R  G+ +   P I+ EE  +F DWY +    I
Sbjct:    1 MINEEALNSMPSRHYAAYVIGLFPSVFDWVTNVTNTGPIQDFESGGNINLTGLPQ----WFGLLAWKRGALLVSFVWVAMLVSVIDRKWKKAAVWSTMGALFALFGIIHVPEAGFANFATPVWEQC--------VSSPGNCWDFAEQYMFFVAYLMLTGTFALIEVARSMGLDDTLLPAIVDEEGVSFGDWYANADKII 187
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A812JWC3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JWC3_9DINO)

HSP 1 Score: 105 bits (262), Expect = 8.380e-23
Identity = 69/223 (30.94%), Postives = 106/223 (47.53%), Query Frame = 1 
Query:    1 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLTEGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAG--FDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIEGLRRAGVGNLDEPILTEE 663
            S +N  ++ FL+  GL A I + +    I PI+LFVGL + ++ F  +  RH  A + GL P++ADWV +     P   V                   G+  +  G++LV +CWVAM V IIDR +++A +WA +S G +A+G++H   A   F  FT   G +        G +             Y   Y  +  +F A+ GLRR GV  +   I+ +E
Sbjct:  101 SFMNCFIFCFLASTGLFAAINAFIPPWGIAPIILFVGLAIAQDAFDIIKPRHLPAAILGLMPAVADWVLSKWPHDPPPPV-------------------GLAAIAHGSLLVCICWVAMGVFIIDRNFFKALIWAAVSMGISALGLMHQESADLTFKTFTGAKGQV-------FGTSAGG----------YTMGYATLVGLFGALIGLRRMGVSRIPPQIVEKE 287
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A5E8H852_9LEPT (Putative membrane protein n=1 Tax=Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 TaxID=1249483 RepID=A0A5E8H852_9LEPT)

HSP 1 Score: 102 bits (255), Expect = 1.790e-22
Identity = 55/163 (33.74%), Postives = 93/163 (57.06%), Query Frame = 1 
Query:    1 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAAR------GPLAGVAEDG----------TDYNTNLPDLTEGWWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIH 441
            S+++G+    +S FGL+ LI++++       IVL++G+++  + F+ +P  H  AV+ GL P+ A W   I         G L G+ ++           +D  T+LP L     G+L L +G ++ S+ W AM+V I++R+WW+AS+WAVI+A  + VG IH
Sbjct:   67 SMLSGVFMTVVSLFGLMGLIQALIPVEAGMAIVLWIGIIITSQAFQAIPKHHSPAVVVGLLPAFAGWAVLIIQNVFLFLDGKLQGILQELGANKEIHFSLSDIPTHLPFLPYALGGVLSLSQGFLITSMIWAAMVVFILEREWWKASLWAVIAAVLSTVGWIH 229
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BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A815XK08_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A815XK08_ADIRI)

HSP 1 Score: 106 bits (264), Expect = 1.880e-22
Identity = 70/221 (31.67%), Postives = 115/221 (52.04%), Query Frame = 1 
Query:    1 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARGPLAGVAE---DGTDYNTNLPDLTEG--WWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIE-GLRRAGVGNLDE 645
            SL+NGL ++ L +FG+ AL+ SI+   ++ PI++F+GL++  +     P+RHY A LFGL P +ADW       G     ++   + TD++ N+  L     + G+     G++L  +   A+ ++IIDRK+ +A  W++I+A F+  G+I           STVG L     DD             D W +  AY +MAV F+ +E G RR  +   ++
Sbjct:  396 SLVNGLAFIPLCFFGINALLLSIIAIVSVNPIIIFIGLVICSDTLSITPSRHYPAFLFGLMPVVADWAKGTIVSGVTNAYSKFLPNNTDFDGNISSLITSFSYRGLSNFSGGSLLQCIFVTAIFMYIIDRKFVRAMTWSLIAAIFSLFGLIDA---------STVGLLIHE--DD-------------DGWKFTVAYSMMAVFFLCLEFGQRRKWIKEANQ 592
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Match: A0A816EH99_9BILA (Hypothetical protein n=5 Tax=Adineta steineri TaxID=433720 RepID=A0A816EH99_9BILA)

HSP 1 Score: 105 bits (263), Expect = 2.570e-22
Identity = 65/212 (30.66%), Postives = 104/212 (49.06%), Query Frame = 1 
Query:    1 SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWVTNIAARG---PLAGVAEDGTDYNTNLPDLTEG--WWGILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFVAIEGLRR 621
            SL NGL +L L +FG+ AL+ SI+   ++ PI++F+GL++  +     P RHY A LFGL P IADW       G         ++ TD+N N+     G  + G+L    G++L  +   A+ ++IIDRK+ +A  W++++A F   G+I+    GF                            + D W +   Y +MA++FV  E  +R
Sbjct:  396 SLANGLAFLPLCFFGINALLVSIIAIVSVNPIIIFIGLVICADTLSITPRRHYPAFLFGLMPIIADWTQGTIISGVNDAYKNFIQNHTDFNQNISSHITGFSYHGLLNFSGGSLLQCIFLTAIFMYIIDRKFLRAMFWSLLAAIFALFGLINASSVGF------------------------LIHKNDDGWKFSVGYGMMAILFVCFEFAQR 583
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1253.1945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHI4_ECTSI2.070e-16993.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Z5K0X1_FISSO2.710e-6649.37Putative MFS transporter, AGZA family, xanthine/ur... [more]
A0A448ZC90_9STRA2.430e-5644.16Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4EKF1_9STRA3.440e-5544.16Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2K3Q3_9STRA5.330e-4744.62Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2UIB7_9STRA3.030e-4643.22Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A812JWC3_9DINO8.380e-2330.94Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A5E8H852_9LEPT1.790e-2233.74Putative membrane protein n=1 Tax=Leptospira yanag... [more]
A0A815XK08_ADIRI1.880e-2231.67Hypothetical protein n=1 Tax=Adineta ricciae TaxID... [more]
A0A816EH99_9BILA2.570e-2230.66Hypothetical protein n=5 Tax=Adineta steineri TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1253contigE-fasciculatus_F_contig1253:176..5018 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score490.3
Seed ortholog evalue5.3e-136
Seed eggNOG ortholog2880.D8LHI4
EggNOG free text desc.purine nucleobase transmembrane transporter activity
EggNOG OGs2QRYA@2759,COG2252@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons7
Model size765
Cds size765
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927760.7880652-CDS-E-fasciculatus_F_contig1253:175..3711622927760.7880652-CDS-E-fasciculatus_F_contig1253:175..371Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 176..371 +
1695995682.9812207-CDS-E-fasciculatus_F_contig1253:175..3711695995682.9812207-CDS-E-fasciculatus_F_contig1253:175..371Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 176..371 +
1622927760.822408-CDS-E-fasciculatus_F_contig1253:810..9101622927760.822408-CDS-E-fasciculatus_F_contig1253:810..910Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 811..910 +
1695995682.9928432-CDS-E-fasciculatus_F_contig1253:810..9101695995682.9928432-CDS-E-fasciculatus_F_contig1253:810..910Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 811..910 +
1622927760.8463495-CDS-E-fasciculatus_F_contig1253:1479..16301622927760.8463495-CDS-E-fasciculatus_F_contig1253:1479..1630Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 1480..1630 +
1695995683.0009918-CDS-E-fasciculatus_F_contig1253:1479..16301695995683.0009918-CDS-E-fasciculatus_F_contig1253:1479..1630Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 1480..1630 +
1622927760.864485-CDS-E-fasciculatus_F_contig1253:2741..27951622927760.864485-CDS-E-fasciculatus_F_contig1253:2741..2795Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 2742..2795 +
1695995683.0090797-CDS-E-fasciculatus_F_contig1253:2741..27951695995683.0090797-CDS-E-fasciculatus_F_contig1253:2741..2795Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 2742..2795 +
1622927760.874634-CDS-E-fasciculatus_F_contig1253:3353..34261622927760.874634-CDS-E-fasciculatus_F_contig1253:3353..3426Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 3354..3426 +
1695995683.0175307-CDS-E-fasciculatus_F_contig1253:3353..34261695995683.0175307-CDS-E-fasciculatus_F_contig1253:3353..3426Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 3354..3426 +
1622927760.8881173-CDS-E-fasciculatus_F_contig1253:4126..42351622927760.8881173-CDS-E-fasciculatus_F_contig1253:4126..4235Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 4127..4235 +
1695995683.0255544-CDS-E-fasciculatus_F_contig1253:4126..42351695995683.0255544-CDS-E-fasciculatus_F_contig1253:4126..4235Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 4127..4235 +
1622927760.9027398-CDS-E-fasciculatus_F_contig1253:4936..50181622927760.9027398-CDS-E-fasciculatus_F_contig1253:4936..5018Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 4937..5018 +
1695995683.0348628-CDS-E-fasciculatus_F_contig1253:4936..50181695995683.0348628-CDS-E-fasciculatus_F_contig1253:4936..5018Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1253 4937..5018 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1253.1945.1prot_E-fasciculatus_F_contig1253.1945.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1253 176..5018 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1253.1945.1

>prot_E-fasciculatus_F_contig1253.1945.1 ID=prot_E-fasciculatus_F_contig1253.1945.1|Name=mRNA_E-fasciculatus_F_contig1253.1945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=255bp
SLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPA
RHYAAVLFGLFPSIADWVTNIAARGPLAGVAEDGTDYNTNLPDLTEGWWG
ILGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISAGFTAVGIIHVPV
AGFDDFTSTVGDLCTPVTDDLGVATTATCWDHADQWHYMTAYLIMAVVFV
AIEGLRRAGVGNLDEPILTEEADAFKDWYGDESLTIAPKIEGDKPAAVVA
VPMA*
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mRNA from alignment at E-fasciculatus_F_contig1253:176..5018+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1253.1945.1 ID=mRNA_E-fasciculatus_F_contig1253.1945.1|Name=mRNA_E-fasciculatus_F_contig1253.1945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4843bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1253:176..5018+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCCTCATCAACGGCTTGCTCTACCTCTTCCTGTCATGGTTCGGCCTCGT
CGCCCTCATCCGCTCCATCGTCAACCAGCCCACCATCGGACCCATCGTAC
TGTTCGTGGGACTGATGCTTCTGGAAGAGTGCTTCCGCTTCTTACCCGCC
AGGCATTACGCCGCTGTGCTCTTTGGGCTCTTCCCTTCCATCGCCGGTGA
GTGCCACTGGGAAAGGGTGTGTTGCTGCAGCTCTCCTTCGGCACTGTTCC
TAGTAACTTCTCTGACGGCCAGCTGTGATGGAAAACCACATGGACGGTGA
ATACCCCATAGCCCATAACAGTGCAGATGCGATGTCGGGTAACAATGATT
GCGGGCGGGCGGCAGGATAAATAACTACTGCAAACGTATTACCACAAAGT
TAAGTACGAAGTCGAAAAAGCGGATCTGATGAACGAATCAAGGTGAACGG
AGGAATATTCTATATATCGCAGCCGATTTTGTATTTCTTTTGTCCCCCGA
GTTTGCATGTGAAACCTCGCCGCTGTACAAATTTGACAGCGTTTTTCCGA
GTCCCGTCTCAAGACAGCACTTCTAAGAAAACTAAGAGTCATCCTCACGA
TACTGCTTGTTCCTCACCCCCCATCTCACGCCCAGACTGGGTGACCAACA
TCGCCGCTCGCGGACCTCTGGCCGGCGTCGCCGAGGACGGTACCGACTAC
AACACCAACCTGCCCGACCTCACCGAAGGGTGGTGGTGAGTAGGGCACGA
GCGAGCAACTCTCGTGTTCTTCAAGACGAAGGAAGTGCCTTGTTTTTGCT
CTGTTGTTGCAGAGGGAATTAAACTGAACTTTGTGTTGGAGAGGCGTTCC
GTTTGGGTGCATCACCGAGTTGTCCCCCGATATGCGCAGCGCAGCGCAAG
AGTACAAGTTGCAGCGGAGAGAATGCGGCAAGGGGGATGGAGATACCTAC
TACTATTGTGGCCAAACGGCTATCCAACGCCCACACCTGTCCGCGTTCTC
TTTGAAATGTGGTGGCGGTGAGCAAGACACGCGGCTAGCTGTGTTTGAGG
GTTGCTTCTGAATCCAAAGGCAGGGTTCATTGGCCGTTGCCGTTCCTACG
CAGGTCTAGGGTGTGAAAGGAAGTGATCGCGGAAAATCGACTTCTACTGC
AAACACAGCAGCAGCTGCTGCGCAACAAGAGCAGTAGCAGCAACACCGAC
ACCGATAGCAACAGCCAGCAGCACCGACAGTGACCACTCACAGCTTCATC
AACAACGACGTTTGGCACGCCTTTCTCGTTTCCTTCTACCTGAACCAATC
TCAGGGGCATCCTCGGCCTCAAGCGCGGGGCTATTCTGGTGTCTCTCTGC
TGGGTTGCCATGCTCGTACACATCATCGACCGCAAGTGGTGGCAGGCGTC
GGTCTGGGCAGTCATATCGGCCGGCTTCACCGCAGTCGGCATCATTCATG
TTCCGGTGAGCCCCCCGCCTATGAAAAAAATCGTTGCGGTCACTCTTCTC
GTTAGGATGCCACTCTGACCTTTAGCAATGAAACAGAATGGTGACAGAGC
AGTAGTAGATGAGCACATGCGGTCGGAGGCAGGCCGCGATGCAATTGAAT
TGCGACAACATTCAACACGATTAATATATATATGGGTGTGTTTTATTAAT
TAATTGTTTTTGTTTTGGGTATGGGGTGTGTTATTTATTTTTTGGTTTTG
GGGAGACAATATGCCTTGCAGCGTACCCAGACTGTACTCCAACGACAGTC
CGTGATTTCCGTGGTAAGTCTCACAAGCCAGCACACTACCTCCCGGAAAC
CGGTACAGACAGCAGTAGGCGATATTGTGTGGGTAGAAAGGCCGCGGTTA
GTTGTTCATGATTTGCAAGAAGGTTGACGCCTGCCACCACCAACAATAAG
TGGGCTTCACGACCACCGTCACACGTGATGGTCTGCCGTTTGTGTTCGAA
CCCCCCCCACGGAATGCGATCATGTTGGCGTGTGAGGCTTGCTGTACCCT
GCCCCAGTCCCCAGTCGTCGGTGAAGCCCCTTCCGACGAAGATCTCCGTC
CGGACCGCCTTCGCGAGGGTTATTATTAATATATGAAATAGAGAGGGGGT
TGTAATCCTAACCCCAACCCCCAGCCCCACCCCGTAACCGTTACTAAAAC
CAAGCTTATTCTCGCGAAGGCTACTGCTCCGTCCTGGGGTTGTACGGAAA
GGCGGAGAAGGGTCTGGTCTGAGAGAAAGATAGGGAGAGACGGAGAAAGA
CAGACAGACAGACAAAGACAGAGAGAGCGAGCGAGAGAGACATAGGAGGA
GGCAAAAAACAGAGACAAAACCAGAAGTACAGACGAAGACGCAAAGAGAG
AGAGAGACCGAGACAGACAGAGATTGAGGCAGACCGACAGAGAGACAGAC
AGACAGAGACAGAGGGGCAGGGGGGCGATGCTGCCAACTGACGATGATGA
CACGCGTTCACGCACACGTCACGGCCAACATGGTCCGACGACGATCAAGC
AAGACACAAAACAAAAGACTGCCCTCCCCTCCATCTTGCTCTCTGTCCTA
TTCTTGTGATGTTCAGGTGGCCGGATTCGACGACTTCACCTCTACCGTGG
GCGACCTGTGTACTCCCGTGGTGAGTCACTCACGCACTTTCTAACCCTAC
ACTCGTTTTTGAGGGTAGCCGGGTGAACTAGTTTGATAGATGATGGGGGG
TCTCAATTGCGCTCCGATGAGTACAGTCTGTGCCAAGGGCTGTAAAACGT
GGGGCTGGTCACTCTCAGGTTATTATCATGGCCAAAGTTGAGACAGCACA
GCATGTACGTTCGTGTTTTTGTCAAGTATTGCTCACTGTGACTGTCGATC
GGTCTTCCCCCAACACATTCGATACCACCACAATTTTGTACTCATCCCTA
AGAAAAGAGTGTGTTGTCTTATCGACAACAGACGTCAACGTGGAGCTTCT
TGCTTGCACTTAACCCGCGCGCTACCTTTAGGTGGCGACCGACCTCACTT
TGCCAGGTGCAATGTTCAACAAAAAACGACCGATTCCCTTGTTTTGCTGA
CAAAGCAGCGGCACTGCTGTGGTAAATAGCAGACGCGCTTCAAGACGTCA
ACACACGAGCTTGTCACGGATGCTTCTTCACAGAATGGTCGAAGATAACC
CCCCCCACCCCCCCGTTCTGTTTCTCAGACCGACGATCTCGGAGTGGCGA
CCACGGCCACCTGCTGGGACCACGCAGACCAGTGGCACTACATGACCGCA
TGTGAGGAACATTAAGAAATACGTGGCACATTGTAGGAAAACGGTGAAGA
TCCCATGGTTTTAGACCGTACGGGCGTGCGGCAGATGTAAACATCAGCGC
TGTACGGTAAGCGAGGAACCAAATTGAACACGGTACAGACTAAACAATCC
CGCGTTCGCAAACACGTTACCAAACCCGCTCGTCCCTTTGGGGGAGGGTA
AAGTAACTCCACCCGATTCCTCCACGTTGCGCTGAATAGAGCTCTAGGGA
TTCAACGTAGACATGAACGATGTACTGCGAGGGTGTGATGAAGAAAACCT
GTCTCCACTTGAGGGAGGCTTTCGGAACGCGTCGAGTAGCACACTTCACA
AGCTCTTTAGCTGCTTTCCTCCTGTCCATTCCATTTGTCTTTGCCCGTCC
TCATTGTGCTGCAATGGCGAAGAGAGTCAGACACTCGACTACAAACATGT
GCTTCTGAGACCGATAAAACATTCGTTTTGTTCGACGGATCGACGCAACA
AGACGCGGGAGTTTCAGCAACCCTGGTGCTCAGTTTCGACCCACAGCGCG
GTGCCGCTGTCCCGTTCTCTCTCAACAGTACATTTCTCACCTCGCCTTTT
CCTCGCACCTGTACGTTCGCTACAAACGTTCTTGTCTGCGGCGGCCCGAC
ATCATCACCTCCAAACACATCCAACGAAACACATCTAACGAAATCGATCA
GATCTCATAATGGCGGTGGTTTTCGTCGCCATCGAAGGCCTCAGGCGGGC
TGGCGTGGGGAACCTCGACGAGCCCATCTTGACCGAAGAGGCGGATGCCT
TCAAGGACTGGTGAGCCTAATAGCGTCTCAGCGCCACCTGTTGTTGTTGT
TTTCTACCGTGTTGCGGTCTGCGTGCGTGTACTCGTTCCCAAGCATGGCA
ATCAATAAAAAGTGGTGGTTTCCGTGTACCACGGTTATTACCTCTTTTTC
CCTGGGGAAGTCACTGGCGTTTCTTGATTGAAGGAGACGAAACTCGTCGT
GGATACGCTTTGTGGTGGACTTGGCTAGCAGTGAGAAATGGCTGTTCGAC
GACGAGGTTGTGGTCAGCACTGAAGATAAAACGGAATGTATTGCCCTTCT
CTCTGTTTTCTTTCCGTTTTTAGACCAGAAAATTCTGACCGAGCCAACCG
TAACCACTTCTCGTGGCAACGATTGAACACTGTTGACGGGTACATAACCA
CGCCGGCTTGAGTGGTTGTAACCGTTTAAAGATTCATTTTTTAAGTTTCG
ACGGGGTTTTCATGTATTTGTTGGAAACGTCACAGGAAATAACACATTGT
AAAAATTGAAACAGCATGTACTGTCCGTTGTGGCTTTGGTCGTGGCTATT
GAGAAGCGGCTTTGATATTTCGCCGCGCGCCCACAACACGTCAAACTACT
TTACTCCCCCGGTATACCACACACCTAAGCTGTCGACGCTGTCATGGTTT
GTGGCCGGTATCCTTTTGTTGGTGTCTTGCGTGTGTTGTTGCTTTTTGCC
CATCCTCTCAGGTACGGCGACGAATCTCTCACTATCGCCCCCAAGATCGA
GGGAGACAAGCCTGCCGCTGTGGTCGCCGTTCCTATGGCCTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1253:176..5018+

>mRNA_E-fasciculatus_F_contig1253.1945.1 ID=mRNA_E-fasciculatus_F_contig1253.1945.1|Name=mRNA_E-fasciculatus_F_contig1253.1945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1530bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1253:176..5018+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCCTCATCAACGGCTTGCTCTACCTCTTCCTGTCATGGTTCGGCCTCGT
CGCCCTCATCCGCTCCATCGTCAACCAGCCCACCATCGGACCCATCGTAC
TGTTCGTGGGACTGATGCTTCTGGAAGAGTGCTTCCGCTTCTTACCCGCC
AGGCATTACGCCGCTGTGCTCTTTGGGCTCTTCCCTTCCATCGCCGAGCC
TCATCAACGGCTTGCTCTACCTCTTCCTGTCATGGTTCGGCCTCGTCGCC
CTCATCCGCTCCATCGTCAACCAGCCCACCATCGGACCCATCGTACTGTT
CGTGGGACTGATGCTTCTGGAAGAGTGCTTCCGCTTCTTACCCGCCAGGC
ATTACGCCGCTGTGCTCTTTGGGCTCTTCCCTTCCATCGCCGACTGGGTG
ACCAACATCGCCGCTCGCGGACCTCTGGCCGGCGTCGCCGAGGACGGTAC
CGACTACAACACCAACCTGCCCGACCTCACCGAAGGGTGGTGACTGGGTG
ACCAACATCGCCGCTCGCGGACCTCTGGCCGGCGTCGCCGAGGACGGTAC
CGACTACAACACCAACCTGCCCGACCTCACCGAAGGGTGGTGGGGCATCC
TCGGCCTCAAGCGCGGGGCTATTCTGGTGTCTCTCTGCTGGGTTGCCATG
CTCGTACACATCATCGACCGCAAGTGGTGGCAGGCGTCGGTCTGGGCAGT
CATATCGGCCGGCTTCACCGCAGTCGGCATCATTCATGTTCCGGGGCATC
CTCGGCCTCAAGCGCGGGGCTATTCTGGTGTCTCTCTGCTGGGTTGCCAT
GCTCGTACACATCATCGACCGCAAGTGGTGGCAGGCGTCGGTCTGGGCAG
TCATATCGGCCGGCTTCACCGCAGTCGGCATCATTCATGTTCCGGTGGCC
GGATTCGACGACTTCACCTCTACCGTGGGCGACCTGTGTACTCCCGTGGT
GGCCGGATTCGACGACTTCACCTCTACCGTGGGCGACCTGTGTACTCCCG
TGACCGACGATCTCGGAGTGGCGACCACGGCCACCTGCTGGGACCACGCA
GACCAGTGGCACTACATGACCGCATACCGACGATCTCGGAGTGGCGACCA
CGGCCACCTGCTGGGACCACGCAGACCAGTGGCACTACATGACCGCATAT
CTCATAATGGCGGTGGTTTTCGTCGCCATCGAAGGCCTCAGGCGGGCTGG
CGTGGGGAACCTCGACGAGCCCATCTTGACCGAAGAGGCGGATGCCTTCA
AGGACTGATCTCATAATGGCGGTGGTTTTCGTCGCCATCGAAGGCCTCAG
GCGGGCTGGCGTGGGGAACCTCGACGAGCCCATCTTGACCGAAGAGGCGG
ATGCCTTCAAGGACTGGTACGGCGACGAATCTCTCACTATCGCCCCCAAG
ATCGAGGGAGACAAGCCTGCCGCTGTGGTCGCCGTTCCTATGGCCTAAGT
ACGGCGACGAATCTCTCACTATCGCCCCCAAGATCGAGGGAGACAAGCCT
GCCGCTGTGGTCGCCGTTCCTATGGCCTAA
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