mRNA_E-fasciculatus_F_contig12516.1934.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12516.1934.1
Unique NamemRNA_E-fasciculatus_F_contig12516.1934.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: A0A6H5JEW1_9PHAE (FAD-binding PCMH-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEW1_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 2.600e-155
Identity = 218/233 (93.56%), Postives = 225/233 (96.57%), Query Frame = 1 
Query:    1 QFAADEKKMHDGDKKKPFSWLPCLGAKDSVDDESEVDVDSNLQEVKAGKVDKDGNFNNWASTAPSKPGKVFAPESASEVQDILAEARALSPSPKIRCTGSSHSWTSLFADDGAWLVDTTGLKDIVWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQTVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLGVTV 699
            +FAA+EKKMHD DKKKPF WLPCLGA DSVDDESEVDVDSNLQEVKAGKVDKDGNFNNWASTAPSKPGKV  P+S SEVQDILAEARAL+PSPKIRCTGSSHSWT+LFADDGAWLVDTTGLKDIVWSADENPTQVK+GPGVT GELA FCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQTVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLG+TV
Sbjct:   27 KFAAEEKKMHDDDKKKPFRWLPCLGATDSVDDESEVDVDSNLQEVKAGKVDKDGNFNNWASTAPSKPGKVITPKSVSEVQDILAEARALAPSPKIRCTGSSHSWTNLFADDGAWLVDTTGLKDIVWSADENPTQVKVGPGVTGGELATFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQTVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLGITV 259
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: A0A6H5L8C4_9PHAE (FAD-binding PCMH-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8C4_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 3.110e-75
Identity = 110/184 (59.78%), Postives = 144/184 (78.26%), Query Frame = 1 
Query:  148 VDKDGNFNNWASTAPSKPGKVFAPESASEVQDILAEARALSPSPKIRCTGSSHSWTSLFADDGAWLVDTTGLKDIVWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQTVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLGVTV 699
            V KDG F NWA+T  + P KV  P+S  +VQ+IL++AR  +P PKIRC GS HSWT LFADDG+W++DT+G+ DIVWS+D  PTQV IGPGVT G+L  + DSK+RG WRG+F+ SDV+LE+VTYGG +++ACHG G+TQT+ DYV+  + I WDG +V+LSR +DP GFA+ +A FGL+GV V
Sbjct:   66 VSKDGEFRNWAATVQTAPAKVLKPKSIRDVQEILSQARCRNPMPKIRCVGSGHSWTHLFADDGSWVLDTSGINDIVWSSD-CPTQVSIGPGVTPGQLGTYMDSKERGRWRGLFLPSDVVLESVTYGGTISSACHGTGKTQTLPDYVIKMSFIKWDGTQVDLSRAEDPTGFAICVASFGLVGVIV 248
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: A0A197K3T3_9FUNG (D-arabinono-1,4-lactone oxidase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K3T3_9FUNG)

HSP 1 Score: 99.0 bits (245), Expect = 2.740e-20
Identity = 59/184 (32.07%), Postives = 98/184 (53.26%), Query Frame = 1 
Query:  154 KDGNFNNWASTAPSKPGKVFAPESASEVQDILAEARALSPSPKIRCTGSSHSWTSLFADDGAWLVDTTGLKDI---VWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVG-QTQTVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLGV 693
            KD  + NWA      P ++F P++  ++  I+ +A+A   +  IRC GS H+W+S    DG +LVD  G++ I   V+ + +    V +  GV   +L +     D      + + S+V+L++V YGG+++  CHG    T+T+ D V   TII  +G     S +++PE FA    + GLLG+
Sbjct:   45 KDATWTNWAKNQSCNPTEIFHPKTLQDLTAIVLKAKATGKT--IRCAGSGHTWSSSSVTDG-YLVDVNGMQQIHAPVYDSAQKTWTVTMETGVLVKDLDDALRKHDP----PLSLPSNVVLDSVRYGGILSLGCHGAATHTRTLPDLVTEVTIIDANGILNTFSEINNPEEFAAATVNLGLLGI 221
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: UPI001069830B (uncharacterized protein LOC114523184 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069830B)

HSP 1 Score: 99.4 bits (246), Expect = 2.750e-20
Identity = 73/197 (37.06%), Postives = 97/197 (49.24%), Query Frame = 1 
Query:  166 FNNWASTAPSKPGKVFAPESASEVQDILAEARALSPSPK------IRCTGSSHSWTSLFADDGAWLVDTTGLK---------DIVWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQ-TVCDYVVATTIITWDGKRVELSRVDDPEGF-----ALKIAHFGLLGV 693
            F NW  T       V  P++A EV+DILA A + +   K      +RC G  HSW+ LF D G+ L+ T+ L          D V    +NP  + + PGVT GEL+ F    +      +   +DVIL+ VTYGGV+   CHGVG+ Q  V DYV   +I+  +GK    S    P G      ALK  + GL GV
Sbjct:   28 FQNWGMTQQMTVISV-KPKTAKEVEDILAAAISYNAELKNTVKVSVRCVGDGHSWSPLFPDKGSILMYTSNLVLNSHQRIRLDQVELCTQNPLTITMAPGVTTGELSKFFTENN------VCFNTDVILDKVTYGGVIAPGCHGVGKDQLAVSDYVTGMSIVGANGKE---SHYTFPSGNPDHDNALK-CNMGLFGV 213
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: UPI00106CC8B9 (uncharacterized protein LOC114523183 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CC8B9)

HSP 1 Score: 92.4 bits (228), Expect = 6.780e-18
Identity = 64/193 (33.16%), Postives = 93/193 (48.19%), Query Frame = 1 
Query:  166 FNNWASTAPSKPGKVFAPESASEVQDILAEARALSPSPK------IRCTGSSHSWTSLFADDGAWLVDTTGLK---------DIVWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQ-TVCDYVVATTIITWDGKRVELSRVD-DPEGFALKIAHFGLLGV 693
            F NW  T       V  P++  EV+DIL    + +   +      +RC G  HSW+ LF D+G  L+ T+ L          + V    +NP  + + PGVT GEL+ F    +      +   +DVIL+ VTYGGV+   CHGVG+ Q  V DYV   +I+  +GK  E +    +P+       + GL GV
Sbjct:   28 FQNWGMTQKMTVISV-KPKTVKEVEDILGAVISYNAELRNGRKLSLRCVGDGHSWSPLFPDEGNILMYTSNLVLKSHQRIRLNQVEIGTQNPLTITMAPGVTTGELSKFFTENN------VCFNTDVILDKVTYGGVIAPGCHGVGKDQLAVSDYVTGMSIVGANGKESEYTFPSGNPDHDNALKCNMGLFGV 213
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: A0A197K6G6_9FUNG (D-arabinono-1,4-lactone oxidase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K6G6_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 2.060e-17
Identity = 59/180 (32.78%), Postives = 93/180 (51.67%), Query Frame = 1 
Query:  166 FNNWASTAPSKPGKVFAPESASEVQDILAEARALSPSPKIRCTGSSHSWTSLFADDGAWLVDTTGLKDI---VWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVG-QTQTVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLGV 693
            + NWA      P ++F P + +++ +I+ +A+A     KIRC  S HSW+S    DG +LV    ++ +   VW  +     V I  GV   +L +     D      + + S+V+L++V YGG+++  CHG   QT+T+ D V   TII  DG     ++  +PE FA    + GLLGV
Sbjct:   60 WTNWAKNQSCDPTEIFNPTNLADLTEIVLKAKA--NGKKIRCAASGHSWSSTSVTDG-YLVVVNKMEKVHRPVWDDELRSWTVMIETGVLVKDLDDVLRENDP----PLALPSNVVLDSVRYGGILSLGCHGAATQTRTLPDLVSEVTIIDADGNLNTFTK-RNPEEFAAATVNLGLLGV 231
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: UPI0009E3FFFB (uncharacterized protein LOC110068020 isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3FFFB)

HSP 1 Score: 86.3 bits (212), Expect = 9.020e-16
Identity = 68/196 (34.69%), Postives = 96/196 (48.98%), Query Frame = 1 
Query:  166 FNNWASTAPSKPGKVFAPESASEVQDILA------EARALSPSP--KIRCTGSSHSWTSLFADDGAWLVDTTGLK---------DIVWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQ-TVCDYVVATTIITWDGKRV--ELSRVDDPEGFALKIAHFGLLGV 693
            F NW  T       V  P+S  EV+ ++       EAR     P   IRC G  HSW+ LF DDG  L+ T+ L          +   S DE+ T V I PGVT G+L+ F    +      + ++SDVIL+ VTYGGV+   CHGVG+ Q +V D V   +I+  D K +  + + + D +       + GL G+
Sbjct:   30 FQNWGMTQEMNVLSV-RPKSVKEVEQVIDAMNRYNEARKGKNEPLLSIRCVGDGHSWSPLFPDDGNVLMYTSELVLEGGERIRLNEPPSKDEDIT-VTIVPGVTTGDLSMFFKKNN------VCLKSDVILDKVTYGGVIATGCHGVGKDQKSVSDNVTGMSIVGADAKEMTYDFAGITDLDRANSLKCNLGLFGI 217
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: A0A1Y2H0Y1_9FUNG (D-arabinono-1,4-lactone oxidase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H0Y1_9FUNG)

HSP 1 Score: 80.5 bits (197), Expect = 7.630e-14
Identity = 60/208 (28.85%), Postives = 97/208 (46.63%), Query Frame = 1 
Query:   85 SVDDESEVDVDSNLQEVKAGKVDKDGNFNNWASTAPSKPGKVFAPESASEVQDILAEARALSPSPKIRCTGSSHSWTSL-FADDGAWLVDTTGLKDIV--WSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQ-TVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLGVT 696
            S+    E  + SN   VK    ++   F NWA    + P ++F P++A+E+ DI+  A       KIRCT    +W+S    ++  +LV+ T +  I      + N   V+I  GV   +L    D   R     + + S V+L ++++GG+++  CHG    + T+ D V    II   G     S+  DP  F+      GLLG+T
Sbjct:    7 SISKTKEAQLKSN-DAVKKETKEQQYTFTNWAGNQRACPAQIFHPQTANELVDIVHLANV--EGKKIRCTAFGCTWSSSSVVNEEGYLVNITKMNRIFDPVHVEGNGWTVEIEAGVAVKDL----DDALRKHEPPLALTSSVVLNSISFGGIISLGCHGAASHESTMSDLVTKVKIIDASGVMNTFSKAADPHEFSAAAVSLGLLGIT 207
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: A0A3D4WSL6_9ACTN (FAD-linked oxidoreductase n=1 Tax=Micromonosporaceae bacterium TaxID=1873464 RepID=A0A3D4WSL6_9ACTN)

HSP 1 Score: 60.1 bits (144), Expect = 6.280e-7
Identity = 47/181 (25.97%), Postives = 82/181 (45.30%), Query Frame = 1 
Query:  160 GNFNNWASTAPSKPGKVFAPESASEVQDILAEARALSPSPKIRCTGSSHSWTSLFADDGAWLVDTTGLKDIVWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVG-QTQTVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLGVTV 699
            G + NWA +  + P +V  P    EVQ  +AEAR      K++  G+ HS+T + A  G  L D + L+ ++   D    +V+   G    ++    +S D      + +Q+   ++  +  G  +   HG G +   +   + A T++T +GK +E+S   + E         G LGV V
Sbjct:    5 GTWQNWARSESATPTRVLHPTGVEEVQTAIAEARR--DGLKVKAIGAGHSFTGIAAAPGVQL-DLSRLQGLL-EVDLAQHRVRFAAGTRLYQVPPMLESFD------LAMQNLGDIDAQSISGATSTGTHGTGFRFGGLATQIAALTLVTAEGKVLEISEHSNAELLPAARLGLGALGVIV 175
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BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Match: A0A5C8IEK7_9MICO (FAD-binding protein n=1 Tax=Homoserinibacter sp. GY 40078 TaxID=2603275 RepID=A0A5C8IEK7_9MICO)

HSP 1 Score: 53.5 bits (127), Expect = 9.760e-5
Identity = 49/177 (27.68%), Postives = 79/177 (44.63%), Query Frame = 1 
Query:  172 NWASTAPSKPGKVFAPESASEVQDILAEARALSPSPKIRCTGSSHSWTSLFADDGAWLVDTTGLKDI-VWSADENPTQVKIGPGVTCGELANFCDSKDRGEWRGMFIQSDVILETVTYGGVVNAACHGVGQTQ-TVCDYVVATTIITWDGKRVELSRVDDPEGFALKIAHFGLLGVT 696
            NWA       G++ AP +  +VQ + AEA   SP   +R  G+ HS++ + AD    L+ ++G  D       E+   V +  G+  GELA   +++      G+ + +   L  ++  G +    HG G    ++   V A   +   G+ V L R  DPE F   +   G LG T
Sbjct:    5 NWAGNIAFGAGRLVAPSTIDDVQQLFAEA---SPG-SVRPLGTRHSFSPI-ADTPGTLLSSSGFADANEIRISEDRASVSVPGGIRYGELARALEAE------GLALANLASLPHISVAGAIATGTHGSGVANGSLATAVRAIEFVNGSGEIVTLRR-GDPE-FDGAVVSVGALGFT 168
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12516.1934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JEW1_9PHAE2.600e-15593.56FAD-binding PCMH-type domain-containing protein n=... [more]
A0A6H5L8C4_9PHAE3.110e-7559.78FAD-binding PCMH-type domain-containing protein n=... [more]
A0A197K3T3_9FUNG2.740e-2032.07D-arabinono-1,4-lactone oxidase n=1 Tax=Linnemanni... [more]
UPI001069830B2.750e-2037.06uncharacterized protein LOC114523184 n=1 Tax=Dendr... [more]
UPI00106CC8B96.780e-1833.16uncharacterized protein LOC114523183 n=1 Tax=Dendr... [more]
A0A197K6G6_9FUNG2.060e-1732.78D-arabinono-1,4-lactone oxidase n=1 Tax=Linnemanni... [more]
UPI0009E3FFFB9.020e-1634.69uncharacterized protein LOC110068020 isoform X1 n=... [more]
A0A1Y2H0Y1_9FUNG7.630e-1428.85D-arabinono-1,4-lactone oxidase n=1 Tax=Lobosporan... [more]
A0A3D4WSL6_9ACTN6.280e-725.97FAD-linked oxidoreductase n=1 Tax=Micromonosporace... [more]
A0A5C8IEK7_9MICO9.760e-527.68FAD-binding protein n=1 Tax=Homoserinibacter sp. G... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12516contigE-fasciculatus_F_contig12516:38..3778 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.8
Seed ortholog evalue1.5e-126
Seed eggNOG ortholog2880.D7FR14
EggNOG OGs2E419@1,2SB01@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFAD-binding, type 2, subdomain 1
Ec32 orthologEc-09_002930.1
Exons6
Model size699
Cds size675
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12516.1934.1prot_E-fasciculatus_F_contig12516.1934.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12516 62..3778 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927757.692511-UTR-E-fasciculatus_F_contig12516:37..611622927757.692511-UTR-E-fasciculatus_F_contig12516:37..61Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12516 38..61 +
1695995682.2612796-UTR-E-fasciculatus_F_contig12516:37..611695995682.2612796-UTR-E-fasciculatus_F_contig12516:37..61Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12516 38..61 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927757.7074718-CDS-E-fasciculatus_F_contig12516:61..1131622927757.7074718-CDS-E-fasciculatus_F_contig12516:61..113Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 62..113 +
1695995682.2709973-CDS-E-fasciculatus_F_contig12516:61..1131695995682.2709973-CDS-E-fasciculatus_F_contig12516:61..113Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 62..113 +
1622927757.7205346-CDS-E-fasciculatus_F_contig12516:655..8341622927757.7205346-CDS-E-fasciculatus_F_contig12516:655..834Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 656..834 +
1695995682.2792115-CDS-E-fasciculatus_F_contig12516:655..8341695995682.2792115-CDS-E-fasciculatus_F_contig12516:655..834Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 656..834 +
1622927757.7342405-CDS-E-fasciculatus_F_contig12516:1645..17921622927757.7342405-CDS-E-fasciculatus_F_contig12516:1645..1792Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 1646..1792 +
1695995682.2876713-CDS-E-fasciculatus_F_contig12516:1645..17921695995682.2876713-CDS-E-fasciculatus_F_contig12516:1645..1792Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 1646..1792 +
1622927757.7498386-CDS-E-fasciculatus_F_contig12516:2263..23251622927757.7498386-CDS-E-fasciculatus_F_contig12516:2263..2325Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 2264..2325 +
1695995682.2958899-CDS-E-fasciculatus_F_contig12516:2263..23251695995682.2958899-CDS-E-fasciculatus_F_contig12516:2263..2325Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 2264..2325 +
1622927757.765575-CDS-E-fasciculatus_F_contig12516:3046..31491622927757.765575-CDS-E-fasciculatus_F_contig12516:3046..3149Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 3047..3149 +
1695995682.304276-CDS-E-fasciculatus_F_contig12516:3046..31491695995682.304276-CDS-E-fasciculatus_F_contig12516:3046..3149Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 3047..3149 +
1622927757.776024-CDS-E-fasciculatus_F_contig12516:3646..37781622927757.776024-CDS-E-fasciculatus_F_contig12516:3646..3778Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 3647..3778 +
1695995682.3126469-CDS-E-fasciculatus_F_contig12516:3646..37781695995682.3126469-CDS-E-fasciculatus_F_contig12516:3646..3778Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12516 3647..3778 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12516.1934.1

>prot_E-fasciculatus_F_contig12516.1934.1 ID=prot_E-fasciculatus_F_contig12516.1934.1|Name=mRNA_E-fasciculatus_F_contig12516.1934.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=225bp
MHDGDKKKPFSWLPCLGAKDSVDDESEVDVDSNLQEVKAGKVDKDGNFNN
WASTAPSKPGKVFAPESASEVQDILAEARALSPSPKIRCTGSSHSWTSLF
ADDGAWLVDTTGLKDIVWSADENPTQVKIGPGVTCGELANFCDSKDRGEW
RGMFIQSDVILETVTYGGVVNAACHGVGQTQTVCDYVVATTIITWDGKRV
ELSRVDDPEGFALKIAHFGLLGVTV
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mRNA from alignment at E-fasciculatus_F_contig12516:38..3778+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12516.1934.1 ID=mRNA_E-fasciculatus_F_contig12516.1934.1|Name=mRNA_E-fasciculatus_F_contig12516.1934.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3741bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12516:38..3778+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGTTTGCCGCGGACGAGAAAAAGATGCACGACGGCGACAAGAAGAAGCC
CTTCAGCTGGCTTCCTTGCCTAGGAGGTGAGAAGGCGCGAGCTGTGTGTC
AGGCATGACTCATTCATCGTTTTCGGTGCATCTTTCTCATGTGCCCTGTC
CCCGGCACCTCGTTTGTCGTTGTTGCTTTGATCTTCACATTATGGACCGT
TCCGACCAACAGCCACGTGTGAGCTGTTCCAAACGCTGACCCTTACCCTA
TTCAAAACCCTCCACCATTAACGACTTACCCTCTAGAGTTTTTCGGGAGA
GCGTCTGAGTGTACCATGGCTAGCTCTCCTTTAGTTGGCCATGTACCGCC
ATCCAACCCACCAATCAAGCTGACCTCATCATGTCCTCCAACCCCGCTTC
GTACAGTTCCCGATGGGGATTTGTGGGGGATCACTGCAAGCCATAATTTT
CCCTTTGTAGTTCGCCATGCTTCGTCAACCAACGAACCAAACTGATCCGA
TCCTGTCCTTCAACCCCGCTTCGTCCTGATCCTCTTCCCGATGCCGGGGG
GTCGCCACATACAATAAATTTTGTTTCCGGGGGGGGGGCTGCAAACAATA
ATTTCCCAACAACATCAGCCAAAGACTCAGTCGACGATGAGTCGGAAGTG
GACGTGGACTCGAACCTGCAGGAGGTGAAGGCGGGCAAGGTCGACAAGGA
CGGGAACTTCAACAACTGGGCCTCCACGGCGCCGTCCAAGCCCGGGAAGG
TCTTCGCCCCCGAGTCTGCCTCGGAGGTGCAGGACATTCTGGCCGAGGTG
AGTTTGGGCAGCAGCAGGTAGACGTTGTGCTATGACTGGCTTGGGGCAGG
TGGATTTTTTTTCCTCCCATTATTGGACTCTGTCGTCTGGCCCTCTGGCC
CCGATCCTCCACTTCTACTTGTACTAGCTAGACGACCCAACCGGGGTCAC
ATAGGAGGGTATGTACTGGAGCTGGTTTGGCAGATGGGTGTTGTGCTGTA
TGTGCCACTCCGTGTAAAAACGTTGCGGCANNNNNNNNNNGAGACAAACG
GGAATATCACAATGGTTCCTGTATTTCCATTGGTCCCTATACTTTCAAAC
TGGGTGGTAGCTGTGCAGTGTATGCAGGTGAACTGATGTGCGACTTTGAA
GTGCGGGGGAAATGTGTACAGCAGGCAGTGTGCGGGATCAAAAGCTCCTT
GATCAACGCCGGCCTCGGCGTGTGCATATGTACAGCTTCCCTAAATTGAC
AATGTCGTAGCGCAGGTTCCCACAAAGGTGCCGGGTGCCGCAACACCGCG
AATCTTGGTTGTTTTTCACTTTTCACCGTGCCGCACTTACTTATAGTCTG
ATACCACCAACCACCGCACCGCCGTCCAACTCGTCGTGCTCCTCGGGCCA
GAGCGTTATTGCTTATTGCCACCCTCCTCTAAAATGCGACGCACCGGTTC
TAGCCACTCGTAGACTAGCCTAGTTTTTTTATTGCAAGCGTAAATGCTCC
TACGAAAAACCTACCACAACAGCGTCAACGTCAGCAAGCTAGTCCTGATA
TCACCACTCACCACCACCACCACGCCGCCGCCGCCGCCCAACTCGTCGTG
TTTCTCAGGCCAGAGCTTTGTCGCCCTCTCCGAAAATCCGATGCACCGGT
TCGAGTCACTCGTGGACTAGTCTCTTCGCGGACGATGGTGCCTGGCTTGT
GGACACGACCGGTCTCAAGGACATCGTTTGGAGCGCGGACGAAAATCCGA
CTCAGGTAAGGTAGTTTATCTACACAAGTACTGTAGCCGCAGGGAGGCGG
CGCACGTACGTTTGGCCTCTCTGTTGTAGGTGAGAATGTTTACAAAATTG
GGTTATAATAGTGACGTTGAAATTTACAACCAAACACAAACTGGTGGCTC
ATTTTACGTTGAAATTAACAACCATAACACAAACTGGTGGCTTATTTCAA
GTGTTGGTTCTACTCCTCCTGTTGGGTTACCACTCGTCTTGCCGCTAAAG
AACAGAGAACAGAACAACACCATGGCGTGTGTACGGGGAGCTCGCACTTC
GTAACTAAAGGTCCCATCCATGTTGGGTGGCCAGCCAGTTCTCGTGTTTT
CTCCACCCCGCCGTGTCCTCCTGGCTTTTTGCTTCTTCTCATGGTCGTCC
GTCATTCCGTCCTTCCGTCCGTCCTTCCGCGCAAACAAAAAATCGAACAA
CACACCACCCCTATTTTCTATTTTAGGTTAAGATCGGACCGGGAGTTACC
TGCGGGGAGCTGGCGAACTTCTGCGACTCCAAAGACAGGTGAGACGATTC
ATGGTCGTCTTCGCGGAATCTCTCGGCGTAGGCACTTTGCGCACTCGCTC
TCTCTCGCGGAGGTGGGTGGCGGAAAAGGCGCAATGAATGATTGGATTGG
CGTAGTGCGGTGTGGTACAAAAGGCAGGTCGTATTTCGAAAGCTTGTTGA
TTTTTGTGCGTCGTTTTGGAAGACGATATGATCATTTATCGATGGATGAG
ACGAACGAAGACATGGTCGAAACGTTGAAGTTTTGGAAACCACGACGAGA
GTATTTATCTTTTGTCATGGTTTGGCATGGCATTCTGGACCACAAAACGT
TTGTTTGGTACGGCAACGTGATGGATGTCGTAGGAAATTTTCAACGACAA
CAACGATGCAGAAGACGGGAGGAGGGGGGGGCTACGCGAAAGGTTGGCAC
GCGTCTAGAAAACCGTCCCGGCCTAAACCTTGTACTCGTAGCCCCTATCA
GCGAAACAGAAGACCATGCAGTGTGCATCCCAAGTACTTATATAAACTGC
TGTGTGTATTGCAAGACCGAGCAACTTTGATCGAACGGACAAATCGTCTC
AAGATCGAACGGACAAATCGTCTCAAGATCGAACGGACAAATCGTCTCAA
GCAACGTTGGGCGCTGAAAAACCACCCCAACATCTTCTCAAGCACTACCA
CGGGCTACGTATATCGTCTGGTCTGGCATCGCCTGCTTTGCCGCATCTGT
TTTCGGCAGGGGCGAGTGGAGGGGCATGTTCATTCAGTCCGACGTCATCC
TGGAAACGGTCACGTACGGGGGCGTGGTTAACGCGGCTTGCCACGGCGTC
GGGCAGACACAGGTAGGGCGTGCTGCAACCCTTCTTGGTGCTCTTTTCGC
AGTCGTCGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTG
CTGCTGTAGGTGTGCTGCAGTCCGAACAGGCGTGGGGGAGACTGTCACCT
TTAGGGAGGCGGTCCTCACGCGGAATATTATTTTGACCACTTCAACTTGA
ATAAAATTCCTGTATGTGGCCTTCCTTCCTGTGTGACCGTTGGTCATAAT
AAGTTATGTGCATGAGTGCGCATACAACCACCCGCATGGGAACAAACGAC
AGACACAGATGTGAATGAACCATGTCACGTACTTTTCTGTCCGTGGAACG
AAATGCTTCTAGAAGGGCTCTCCAGCTTCTAGAAGGGCTCTCCAGATGTT
GTTGCAGGCGTACACATGCACGCTTCGTTACAGCTGCACACCAACGAGTG
GTGGGGAAAGGTAAACCCTACTGTACTATCGTACGTTTTGCCTGCCGTGC
CTGCCGCAGACCGTCTGCGACTACGTGGTGGCGACTACCATCATCACGTG
GGACGGCAAGAGGGTCGAGCTGAGCAGGGTCGACGACCCCGAGGGCTTCG
CTTTGAAGATCGCTCACTTCGGCCTCCTTGGGGTCACCGTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12516:38..3778+

>mRNA_E-fasciculatus_F_contig12516.1934.1 ID=mRNA_E-fasciculatus_F_contig12516.1934.1|Name=mRNA_E-fasciculatus_F_contig12516.1934.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1350bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12516:38..3778+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCACGACGGCGACAAGAAGAAGCCCTTCAGCTGGCTTCCTTGCCTAGG
AGATGCACGACGGCGACAAGAAGAAGCCCTTCAGCTGGCTTCCTTGCCTA
GGAGCCAAAGACTCAGTCGACGATGAGTCGGAAGTGGACGTGGACTCGAA
CCTGCAGGAGGTGAAGGCGGGCAAGGTCGACAAGGACGGGAACTTCAACA
ACTGGGCCTCCACGGCGCCGTCCAAGCCCGGGAAGGTCTTCGCCCCCGAG
TCTGCCTCGGAGGTGCAGGACATTCTGGCCGAGCCAAAGACTCAGTCGAC
GATGAGTCGGAAGTGGACGTGGACTCGAACCTGCAGGAGGTGAAGGCGGG
CAAGGTCGACAAGGACGGGAACTTCAACAACTGGGCCTCCACGGCGCCGT
CCAAGCCCGGGAAGGTCTTCGCCCCCGAGTCTGCCTCGGAGGTGCAGGAC
ATTCTGGCCGAGGCCAGAGCTTTGTCGCCCTCTCCGAAAATCCGATGCAC
CGGTTCGAGTCACTCGTGGACTAGTCTCTTCGCGGACGATGGTGCCTGGC
TTGTGGACACGACCGGTCTCAAGGACATCGTTTGGAGCGCGGACGAAAAT
CCGACTCAGGCCAGAGCTTTGTCGCCCTCTCCGAAAATCCGATGCACCGG
TTCGAGTCACTCGTGGACTAGTCTCTTCGCGGACGATGGTGCCTGGCTTG
TGGACACGACCGGTCTCAAGGACATCGTTTGGAGCGCGGACGAAAATCCG
ACTCAGGTTAAGATCGGACCGGGAGTTACCTGCGGGGAGCTGGCGAACTT
CTGCGACTCCAAAGACAGGTTAAGATCGGACCGGGAGTTACCTGCGGGGA
GCTGGCGAACTTCTGCGACTCCAAAGACAGGGGCGAGTGGAGGGGCATGT
TCATTCAGTCCGACGTCATCCTGGAAACGGTCACGTACGGGGGCGTGGTT
AACGCGGCTTGCCACGGCGTCGGGCAGACACAGGGGCGAGTGGAGGGGCA
TGTTCATTCAGTCCGACGTCATCCTGGAAACGGTCACGTACGGGGGCGTG
GTTAACGCGGCTTGCCACGGCGTCGGGCAGACACAGACCGTCTGCGACTA
CGTGGTGGCGACTACCATCATCACGTGGGACGGCAAGAGGGTCGAGCTGA
GCAGGGTCGACGACCCCGAGGGCTTCGCTTTGAAGATCGCTCACTTCGGC
CTCCTTGGGGTCACCGTGACCGTCTGCGACTACGTGGTGGCGACTACCAT
CATCACGTGGGACGGCAAGAGGGTCGAGCTGAGCAGGGTCGACGACCCCG
AGGGCTTCGCTTTGAAGATCGCTCACTTCGGCCTCCTTGGGGTCACCGTG
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