mRNA_E-fasciculatus_F_contig125.1920.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: D7FZA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA3_ECTSI) HSP 1 Score: 1277 bits (3304), Expect = 0.000e+0 Identity = 665/776 (85.70%), Postives = 702/776 (90.46%), Query Frame = 3
Query: 327 MFDRRPATLGRDVGRVVRLGQDVVPPELVDLMVGASTRSAAGSPRPLADTDTAGVDVFAVIAKAYHRLDRHDLTLQLCEAFEESTGKPLVPSTPEGLLWLLRAIRRWRRTAAPRYGRRPMNRKRDGEGERAVKEVLRRYEEGGKEVPAVAYKAAVLALDGGRCTVALEIAQEARSKLGDSAEGLGEVYAAVMKQCLEQLEPDVMRDILEERRQAGGTMAPDARAYDQALGCLGKARRVSEALELFGEMLESGVKPTAISINHMLSGCARDADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGEGIPPNSRFLDHMMQASVGAKQWVMAEAIFRAMTEKYGYPNVVSRQSTMNFIQSMVMQKKLRKVISYVARIQDFYFSLDGPSRSSRSEGGISTSTMDAAILKWFRTIPGVTSEAMAGVLMTMLDKGVRLNPDSYSIVISKANQDGNKELSGTIYKMLVAANGGPSLSAANAAIKGCATIDEALATVESLREQGLSPDKFTYAALLHCCSTAVGDDLQGERATEASVWDAMYGEGICPHGGMLAKYLLALMRSGDWKTALDVRERYLGDNEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPDLALAYVLEVLKARKEEGASGNGGHSDLKHFIDEDNHTVLAGIRACKQAGSCETAMGLLEACEARWARGPLERDAGRGDGGEEGQWAQHEWREMLVRTRLSRRRLYDCLVSVLDEKDHDFGGIRRVLERGMRNGAVSLMKDVSRG 2654
MFDRRPATLGRDVGR+VR GQD + PE+VDLMV ASTRS GSP LADT AGVDVFAVIAKAYHRL RHDLTLQLCEAFEESTG+PLVPSTP+GL+WLL A+RR R T APR GRRP R+GEG R VKEVLRRYEEGGK+VP VAYKAAV AL G CTVALE+AQEARSKLGDSAEGL EVY AVMKQC+EQ EPDVMRD+LEER QAGGTMAPDARAY+ ALGCLGKARR+SEALELFGEMLESGV+P AI+INHMLSGCARDADKFWRHANTIFEGM QRWGVAPNV+HYTSLVTCLLKAGQWSEAIA+TD+MEGEGIPPNSRFLDHMMQASV AKQWV AEAIFRAMTEKYG+ NVV+RQSTM+FIQSMVMQKKLRKVISYVARIQD L GPSRS + TMD A+LKWFR IPGV+SEAMAGVLMTMLDKGVRL+PDSYS+VISKANQDGNKELSGT+YKML+AAN PSLSAANAAIKG ATIDEALATVE+LREQGLSPDKFT+AALLHCCS AVGDDLQG+RATE VW+AM GEGI PHGGMLA YLL+LMRS DWKTALDVRERY GD EEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPDLALAYVLEVLKAR+EEGAS G SDLKHFIDEDNHTVLAGIRACKQ GSCETAMGLLEACEARWARGPLERDAGRGDGGEEGQWAQHEWR+MLVRTRLSRRRLYDCL+SVLDEKDHDFG IRRVLERGMRNGAVSLMKD G
Sbjct: 1 MFDRRPATLGRDVGRMVRSGQDFLSPEIVDLMVSASTRSTVGSPPLLADT--AGVDVFAVIAKAYHRLRRHDLTLQLCEAFEESTGEPLVPSTPQGLVWLLGAMRR-RSTTAPRSGRRPGRHDREGEGGREVKEVLRRYEEGGKDVPVVAYKAAVEALAGCHCTVALEMAQEARSKLGDSAEGLCEVYVAVMKQCIEQQEPDVMRDVLEERIQAGGTMAPDARAYELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDADKFWRHANTIFEGMAQRWGVAPNVYHYTSLVTCLLKAGQWSEAIALTDKMEGEGIPPNSRFLDHMMQASVAAKQWVTAEAIFRAMTEKYGHSNVVTRQSTMDFIQSMVMQKKLRKVISYVARIQDL--PLKGPSRSKGRKN-----TMDTALLKWFRAIPGVSSEAMAGVLMTMLDKGVRLHPDSYSVVISKANQDGNKELSGTLYKMLLAANAAPSLSAANAAIKGSATIDEALATVETLREQGLSPDKFTFAALLHCCSAAVGDDLQGQRATE--VWEAMCGEGIRPHGGMLASYLLSLMRSADWKTALDVRERYRGDEEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPDLALAYVLEVLKAREEEGASDIGSDSDLKHFIDEDNHTVLAGIRACKQVGSCETAMGLLEACEARWARGPLERDAGRGDGGEEGQWAQHEWRQMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGMRNGAVSLMKDQQGG 764
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A6H5L791_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L791_9PHAE) HSP 1 Score: 379 bits (972), Expect = 7.250e-120 Identity = 192/215 (89.30%), Postives = 198/215 (92.09%), Query Frame = 3
Query: 2016 MLAKYLLALMRSGDWKTALDVRERYLGDNEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPDLALAYVLEVLKARKE--EGASGNGGHSDLKHFIDEDNHTVLAGIRACKQAGSCETAMGLLEACEARWARGPLERDAGRGDGGEEGQWAQHEWREMLVRTRLSRRRLYDCLVSVLDEKDHDFGGIRRVLERGMRNGAVSLMKDVSRG 2654
MLA YLLALMRSGDWKTALDVRERY GD EEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQP LALAYVLEVLKAR+E EGASGNG SDLKHFIDEDNHTVLAGIRACKQAGSCETA+GLLEACEARWA+GPLERDAG G G EEGQWAQ+EWR MLVRTRLSRRRLYDCL+SVLDEKDHDFG IRRVLE GM+NGAVSLMKD G
Sbjct: 1 MLASYLLALMRSGDWKTALDVRERYRGDKEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPGLALAYVLEVLKAREEGKEGASGNGNDSDLKHFIDEDNHTVLAGIRACKQAGSCETAIGLLEACEARWAKGPLERDAGSGGGSEEGQWAQYEWRAMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLETGMKNGAVSLMKDQQGG 215
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A8I6XF01_HORVV (Uncharacterized protein n=2 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XF01_HORVV) HSP 1 Score: 67.8 bits (164), Expect = 5.620e-8 Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 3
Query: 987 DARAYDQALGCLGKARRVSEALELFGEMLESGVKPTAISINHMLSGCARDADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGEGIPPNSRFLDHMMQA 1343
D AY + L EA+ELFG+M + GV+P ++ +LS CAR + A IF+ M G+ P V HY SLV L +AG +EA A+ M + P+S L ++ A
Sbjct: 282 DVFAYTAMISGLSDHGHCQEAIELFGQMRDQGVRPNEVTFICVLSACARAGGRLVSVAREIFQSMSAVHGIEPGVEHYGSLVDVLGRAGMLAEAAAVARAMP---MRPDSYVLGALLNA 397
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A200QRE1_9MAGN (Pentatricopeptide repeat n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QRE1_9MAGN) HSP 1 Score: 65.5 bits (158), Expect = 3.440e-7 Identity = 54/206 (26.21%), Postives = 91/206 (44.17%), Query Frame = 3
Query: 945 ILEERRQAGGTMAPDARAYDQAL-GCLGKARRVSEALELFGEMLESGVKPTAISINHMLSGCARDADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGE---------------------GI----------PPNSRFLDHMMQASVGAKQWVMAEAIFRAMTEKY-----GYPNVVSRQSTMNFI 1451
I+ +R +A D A+ + G G R + EA+E F +M E GVKP +I+ +LS C+ IF M R+GV P++ HYT +V L ++G+ EA+ + ++M+ E G+ P N+ + + A++W AE + R M+EKY G+ + +R+ F+
Sbjct: 368 IISAKRCFDRIVAKDVVAWSSMIDGYSGHGRGI-EAIETFEQMQEEGVKPNSITFLSLLSACSHSG--LVSEGCRIFSYMNSRFGVKPDLNHYTCMVDLLGRSGKLQEAVDIIEKMDVEPDSRIWGALFAASRVYSDNEIGVYAAQNLLELEPDNAGYRTLLSNLHASAERWDEAETVRRVMSEKYMKKKPGWSCIETREGFHGFV 570
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A8J5LB63_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LB63_ZINOF) HSP 1 Score: 64.7 bits (156), Expect = 6.410e-7 Identity = 47/166 (28.31%), Postives = 80/166 (48.19%), Query Frame = 3
Query: 942 DILEERRQAGGTMAPDARAYDQALGCLGKARRVSEALELFGEMLESGVKPTAISINHMLSGCARDADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGEGIPPNSRFLDHMMQASVGAKQWVM----AEAIFRAMTEKYGYPNVVS 1427
+IL R+ G + D A+ L EALELF +M + G++P +I+ +LS C+ R +F ME ++G+ PNV HYT LV L ++G+ EA+ + + M + P++R ++ + V+ A+ +F + GY V+S
Sbjct: 437 NILSARKCFGKIVIKDTIAWTSMLEGYAIHGLGLEALELFYQMQKEGIRPNSITFLILLSACSHSG--LVREGCALFNCMENKFGIEPNVSHYTCLVDLLGRSGKLHEALDVINNMS---VEPDARIWGALLASCRTQSDVVLGNFAAKKVFELEPDNVGYQVVLS 597
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A1S2XD25_CICAR (pentatricopeptide repeat-containing protein At1g03540-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XD25_CICAR) HSP 1 Score: 62.8 bits (151), Expect = 9.310e-7 Identity = 35/100 (35.00%), Postives = 49/100 (49.00%), Query Frame = 3
Query: 999 YDQALGCLGKARRVSEALELFGEMLESGVKPTAISINHMLSGCARDADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGE 1298
+ + C G R E E+FG M+E G KP ++ +LS C+ F FE ME R+GV P + HYT +V L + G EA + RM+ E
Sbjct: 178 WSTMMSCYGMHGRFEEVFEMFGRMVEEGKKPDGVTFTAVLSACSHGG--FVEKGREYFEMMEVRFGVKPELRHYTCMVDMLGRVGLVEEAEKLILRMDVE 275
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A6D2I7U4_9BRAS (DYW_deaminase domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I7U4_9BRAS) HSP 1 Score: 63.5 bits (153), Expect = 1.480e-6 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 3
Query: 1011 LGCLGKARRVSEALELFGEMLESGVKPTAISINHMLSGCARDADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGEGIPPNSRFLDHMMQASVGAKQWVMAE 1376
LG GKA EALELF EM+ESGVKP A++ +L+ C+ + A + F+ M + +GV + HY LV L + GQ EA M ++M + PN +++ GAK+ V E
Sbjct: 385 LGMHGKA---DEALELFKEMVESGVKPNAVAFVGLLNACSHVG--YVEEARSYFDLMVREYGVEREIEHYGCLVDALCRTGQLQEAKTMIEKMP---VRPNKVIWMSLLR---GAKKSVDVE 495
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A3B6AVE5_WHEAT (Uncharacterized protein n=8 Tax=Triticinae TaxID=1648030 RepID=A0A3B6AVE5_WHEAT) HSP 1 Score: 63.2 bits (152), Expect = 1.570e-6 Identity = 45/135 (33.33%), Postives = 63/135 (46.67%), Query Frame = 3
Query: 948 LEERRQAGGTMAPDAR---AYDQALGCLGKARRVSEALELFGEMLESGVKPTAISINHMLSGCARDADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGEGIPPNSRFLDHMMQA 1343
L+ RQ M R AY + L EA+ELFG+M + GV+P ++ +L CAR A IF+ M G+ P V HY SLV L +AG +EA A+ M + P+S L ++ A
Sbjct: 266 LDSARQVFAAMPEPERDVFAYTAMISGLSDHGHCQEAVELFGQMQDQGVRPNEVTFICVLCTCARAGGGLVSVAREIFQSMSAVHGIEPGVEHYGSLVDVLGRAGMLAEAAAVVRAMP---MRPDSYVLGALLNA 397
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A2G5DBK2_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DBK2_AQUCA) HSP 1 Score: 62.4 bits (150), Expect = 3.170e-6 Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 3
Query: 1044 EALELFGEMLESGVKPTAISINHMLSGCARDADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGEGIPPNSRFLDHMMQAS 1346
EAL+LF M++ GV+P +I+I +LS C+ F A +FE M R+G+ P++ HYT +V L ++G+ +A M + M I P+SR ++ AS
Sbjct: 420 EALQLFNCMVDEGVEPNSITILSILSACSHSG--FVTEACKVFEYMTGRFGIKPDLNHYTCMVDLLGRSGELCKAREMIENMV---IEPDSRIWGSLLAAS 515
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Match: A0A5P1EJB6_ASPOF (DYW_deaminase domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EJB6_ASPOF) HSP 1 Score: 62.0 bits (149), Expect = 4.450e-6 Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 3
Query: 1044 EALELFGEMLESGVKPTAISINHMLSGCARD--ADKFWRHANTIFEGMEQRWGVAPNVFHYTSLVTCLLKAGQWSEAIAMTDRMEGEGIP 1307
E L LF +M+ESG++P A++ + +LSGC+ DK A F ME+ +G+ P+ HY S+V L +AG +EA M E P
Sbjct: 397 ETLTLFDKMIESGIRPDAVTFSGVLSGCSHSQLVDK----ARQSFSSMEREYGLNPDADHYASMVDVLSRAGYLNEAYEFIQNMPVEPTP 482 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig125.1920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig125.1920.1 >prot_E-fasciculatus_F_contig125.1920.1 ID=prot_E-fasciculatus_F_contig125.1920.1|Name=mRNA_E-fasciculatus_F_contig125.1920.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=870bp MIHYAVRRACATSLRQGGGGLSRWRAPACRLRSAGTFAVSYDNDNTPADPback to top mRNA from alignment at E-fasciculatus_F_contig125:537..14123- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig125.1920.1 ID=mRNA_E-fasciculatus_F_contig125.1920.1|Name=mRNA_E-fasciculatus_F_contig125.1920.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=13587bp|location=Sequence derived from alignment at E-fasciculatus_F_contig125:537..14123- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig125:537..14123- >mRNA_E-fasciculatus_F_contig125.1920.1 ID=mRNA_E-fasciculatus_F_contig125.1920.1|Name=mRNA_E-fasciculatus_F_contig125.1920.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5220bp|location=Sequence derived from alignment at E-fasciculatus_F_contig125:537..14123- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |