mRNA_E-fasciculatus_F_contig12492.1918.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: D7FSN5_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN5_ECTSI) HSP 1 Score: 226 bits (576), Expect = 6.720e-66 Identity = 110/130 (84.62%), Postives = 118/130 (90.77%), Query Frame = 1
Query: 511 QLYPWTYLAEPYKKSLLVIDLGQVDNEASVRWEVDGVELGTGASVETVFQSPGIYPCTVTVSYPQRPRSGGQKDDSPQTSGSPSTVTHDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 900
+LYPWT+LAEPYKKSLL ID GQ D EA RWEVDGVELGTG SVETVF+SPGI+PCTVTVSYPQRP SGG +DDSP+TSGS +TVTH FE+ VKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI
Sbjct: 8 ELYPWTHLAEPYKKSLLAIDAGQDDYEACARWEVDGVELGTGPSVETVFRSPGIFPCTVTVSYPQRPLSGGHEDDSPETSGSLATVTHKFEVTVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 137
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: D7G1Z7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z7_ECTSI) HSP 1 Score: 129 bits (325), Expect = 3.810e-34 Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 1
Query: 679 CTVTVSYPQRPRSGGQKDDSPQTSGSPSTVTHDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 900
CTVTVSYPQ P SGGQ+DDSPQTSGS T+TH+ E+ VKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI
Sbjct: 14 CTVTVSYPQPPLSGGQEDDSPQTSGSLGTLTHELEVTVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 87
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: D7FSM9_ECTSI (Tyrosinase-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM9_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.100e-24 Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 1
Query: 535 AEPYKKSLLVID-----LGQVDNEASVRWEVDGVELGTGASVETVFQSPGIYPCTVTVSYPQRPRSGGQKDDSPQTSGSPSTVTHDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 900
AEPY+ + L I+ L V++E RWE++G +G G ++ET F++ GI+ CTVT SYP GG+ H+FE+ VKYVRREIRDLTDRDRE FFNAVSVLQRVPS VGREI
Sbjct: 119 AEPYRATTLQIEAWPGTLPAVESE-EFRWEINGEFVGVGVTIETFFETVGIHQCTVT-SYPD----GGR---------------HEFEVTVKYVRREIRDLTDRDREAFFNAVSVLQRVPSVVGREI 224
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: A0A6H5JFW1_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFW1_9PHAE) HSP 1 Score: 106 bits (265), Expect = 3.390e-22 Identity = 58/99 (58.59%), Postives = 70/99 (70.71%), Query Frame = 1
Query: 604 WEVDGVELGTGASVETVFQSPGIYPCTVTVSYPQRPRSGGQKDDSPQTSGSPSTVTHDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 900
WE++G +G G ++ET F+S GI+ CTVT S+P GG+ H+FE+ VKYVRREIRDLTDRDRETFFNA+SVLQRVPSAVGREI
Sbjct: 5 WEINGDFVGVGVTLETFFESVGIHQCTVT-SHPD----GGR---------------HEFEVTVKYVRREIRDLTDRDRETFFNAMSVLQRVPSAVGREI 83
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: D7FNR4_ECTSI (Tyrosinase-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR4_ECTSI) HSP 1 Score: 100 bits (249), Expect = 5.610e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 1
Query: 445 TRAEPVITVWNTYSVTDNFPVDQLYPWTYLAEPYKKSLL-VIDLGQVDNEASVRWEVDGVELGTGASVETVFQSPGIYPCTVTVSYPQRPRSGGQKDDSPQTSGSPSTVT----HDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGR 894
T E + ++NTY++ + P+ LYPW ++AEP K S + ++D RW+ DG G G SV+ +F + G Y C+V V P +G T+G+ + + F + VKYVRREIR L+D+DRE FFNA++V+QRVPS VG+
Sbjct: 75 TTTELQVRMFNTYTLQN--PIT-LYPWEHMAEPLKPSTMELLDWPVSGEHLEYRWDADGHLQGYGRSVDVLFSAVGSYECSVVVFDPTL--TGKDPTLRGGTTGNEESARVAGPYSFTVEVKYVRREIRSLSDQDREMFFNAMAVMQRVPSGVGQ 224
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: A0A835Z8Z2_9STRA (Tyrosinase-like protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z2_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.240e-17 Identity = 70/216 (32.41%), Postives = 100/216 (46.30%), Query Frame = 1
Query: 262 RWMQRVAPFAAVFLLGTVALFIRGPVSQEQHWQDQKQGYQEQQLQSGATARTQHIRTPASRTRAEPVITVWNTYSVTDNFPVDQLYPWTYLAEPYKKSLLVI---DLGQVDNEASVRWEVDGVELGTGASVETVFQSPGIYPCTVTVSYPQRPRSGGQKDDSPQTSGSPSTVTHDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 900
+W+ VA V LG +L + PV H D + ++ T + T + E + N Y+ YPW Y+AEPYK + + DL + RW +DG G G S + VF + G Y TV +P G D + + ++ + + VKYVRREIR L D+DRE FF+AVSVLQRVP+ VG+ +
Sbjct: 13 QWLGAVA----VLGLGVASLIVNAPVDST-HVADLARARGPPSIEKPLATATAALATDLKQLTVE----MSNVYTQDGGGSPSVYYPWDYIAEPYKVTTFELVDEDLPDSSDSLDYRWILDGHLQGVGKSTQAVFTTIGNYTMTVEAFWP-----GVDADLA-------TLLSTNITVVVKYVRREIRQLIDQDREAFFSAVSVLQRVPTRVGQRL 207
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: D8LAY9_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY9_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 2.280e-17 Identity = 59/162 (36.42%), Postives = 80/162 (49.38%), Query Frame = 1
Query: 517 YPWTYLAEPYKKSLLVIDLGQ--VDNEASVRWEVDGVELGTGAS---VETV-FQSPGIYPCTVTVSYPQRPRSGGQKDDSPQ----------------------------TSGSPSTVTHDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 900
YPW ++AEPY+ + L + V + ++W ++G G TV F +PG Y C V+V P + + P+ TS + ++F + VKYVRREIR LTDRDRETFFNAV+VLQRVPSAVGR +
Sbjct: 79 YPWEHVAEPYQATRLELTSVPEGVRGGSHIKWTIEGETAAEGEDKFFFNTVAFTTPGKYKCVVSVQNPSTISTAAARTSVPEHETAAAAGGHGVVAASDSIISYAAVAATTSTAGEIFEYEFAVTVKYVRREIRSLTDRDRETFFNAVAVLQRVPSAVGRAV 240
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: A0A7S2R6I2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6I2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 8.450e-15 Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 1
Query: 502 PVDQLYPWTYLAEPYKKSLLVIDLGQVDNEASVRWEVDGVELGTGASVETVFQSPGIYPCTVTVSYPQRPRSGGQKDDSPQTSGSPSTVTHDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 900
P YPW YLAEPY+ S L + Q +E+S RW + +G G S++ VF + G + +R D++ F + VKYVRREIR L+D DRE + +A+SV+QRVP+ VG+E+
Sbjct: 127 PAATQYPWLYLAEPYRVSSLQVSDPQ--SESSYRWSLPDRVVGYGESLDMVFTTTGYNEVLL-----ERLEGDSVVDEAV------------FNVMVKYVRREIRSLSDADRELWLSAMSVMQRVPTVVGKEV 240
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: A0A6H5L614_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L614_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 4.490e-14 Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 601 RWEVDGVELGTGASVETVFQSPGIYPCTVTVSYPQRPRSGGQKDDSPQTSGSPSTVT----HDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGR 894
RW+VDG G G SV+ +F + G Y C+V V P +G T+G+ + + F + VKYVRREIR L+D+DRE FFNAV+V+QRVPS VG+
Sbjct: 14 RWDVDGHLQGYGRSVDVLFTAVGSYECSVVVFDPTL--TGKDPTLRGGTTGNEESARVAGPYSFTVEVKYVRREIRSLSDQDREMFFNAVAVMQRVPSGVGQ 113
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Match: A0A6H5JNJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ2_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.550e-12 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 745 TSGSPSTVTHDFEMAVKYVRREIRDLTDRDRETFFNAVSVLQRVPSAVGREI 900
TS + ++F + VKYVRREIR LTDRDRETFFNAVSVLQRVPSAVGR +
Sbjct: 61 TSTAGEIFEYEFAVTVKYVRREIRALTDRDRETFFNAVSVLQRVPSAVGRAV 112 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12492.1918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12492.1918.1 >prot_E-fasciculatus_F_contig12492.1918.1 ID=prot_E-fasciculatus_F_contig12492.1918.1|Name=mRNA_E-fasciculatus_F_contig12492.1918.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=300bp VLPAGSVGRLATGFVYSNHVSDSNNRAASLFWRGSKAPRNTGGAAAMALSback to top mRNA from alignment at E-fasciculatus_F_contig12492:639..3996+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12492.1918.1 ID=mRNA_E-fasciculatus_F_contig12492.1918.1|Name=mRNA_E-fasciculatus_F_contig12492.1918.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3358bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12492:639..3996+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12492:639..3996+ >mRNA_E-fasciculatus_F_contig12492.1918.1 ID=mRNA_E-fasciculatus_F_contig12492.1918.1|Name=mRNA_E-fasciculatus_F_contig12492.1918.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1800bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12492:639..3996+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |