mRNA_E-fasciculatus_F_contig12432.1873.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: A0A6H5JXV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV4_9PHAE) HSP 1 Score: 409 bits (1051), Expect = 6.570e-142 Identity = 199/205 (97.07%), Postives = 204/205 (99.51%), Query Frame = 1
Query: 1 LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCLQDLSCGRDHCHTPPAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECR 615
LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCC QDLSCGRDHCHTPPA+RAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQS+RG+RRAEALRKLAKHRSQLEKAALAATACKAGWEKG+EYFRAVVKEC+
Sbjct: 44 LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCQQDLSCGRDHCHTPPAQRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSDRGMRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECQ 248
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: A0A6H5KLL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL8_9PHAE) HSP 1 Score: 308 bits (789), Expect = 1.330e-102 Identity = 164/205 (80.00%), Postives = 168/205 (81.95%), Query Frame = 1
Query: 1 LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCLQDLSCGRDHCHTPPAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECR 615
LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSK PAPPR KRPRDCC PA S + HEMMATYKARVEQGQLEFADMHVRDLSTAML+AAVEVDKHE VWR AFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKG+EYFRAVVKEC+
Sbjct: 31 LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKFGPAPPRFKRPRDCC--------------PATHHLQ--------SVLHLQGHEMMATYKARVEQGQLEFADMHVRDLSTAMLNAAVEVDKHEYVWRTAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECQ 213
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: A0A6H5K5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y7_9PHAE) HSP 1 Score: 287 bits (735), Expect = 1.670e-95 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1
Query: 1 LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCLQDLSCGRDHCHTPPAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAA 411
LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCLQDL CGRDHCHTPPAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAA
Sbjct: 14 LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVEPAPPRTKRPRDCCLQDLFCGRDHCHTPPAKRAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAA 150
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE) HSP 1 Score: 280 bits (715), Expect = 3.880e-87 Identity = 159/280 (56.79%), Postives = 186/280 (66.43%), Query Frame = 1
Query: 7 GVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCD-RYATLSKDTSKVEPAPPRTKRPRDCCLQDLSCGRDHCHTPPAK-RAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKLLIKVLALRGVYSKLLKGASRLEAFEASAEFLEVAAGTIKQWELEYRTKGHI 840
G RW + IK PK RDWAAE AA WRPS + E APPR KRPRDC S P AK A G+GRPKGS+G KR+ E +E+GQ A + RDL MLDA EV +H++VW PAFLKRQSNRGV R EALRKLAKHRSQLEKAA A+ AC++GWE+G +YFRAV+KEC+SAVAATSAGL+ES+ VSHAQAG L K LAL+ VY KLLKGA + +AFE +AEF EVA T+++WEL YRTKGHI
Sbjct: 54 GSEQRWCSPYIKCPKGRNTGRDWAAEDRFAATWRPSFSSGNVPHTDASAGEAEAAPPREKRPRDCRHAAASTE----DAPAAKVGGARPGSGRPKGSYGWKRVREAAQQLNDYIERGQPHCALIASRDLPGDMLDAVKEVHQHQEVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNESVLVSHAQAGSLQFKALALKAVYHKLLKGAPKRQAFEDTAEFFEVADSTLREWELSYRTKGHI 329
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: D8LEU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU9_ECTSI) HSP 1 Score: 265 bits (678), Expect = 1.180e-86 Identity = 143/176 (81.25%), Postives = 154/176 (87.50%), Query Frame = 1
Query: 316 MMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKLLIKVLALRGVYSKLLKGASRLEAFEASAEFLEVAAGTIKQWELEYRTKGHIV 843
MM TY+A VEQ QL FA HVR LS+AM DAA EVD+HE WR AFLKRQSNRGVRR EAL KLA HRSQLEKAALA+ A KAGWEKG+EYFRAVVKEC+SAVAATSAGLDE+MDVSHAQAGKLLIK LALR VYSKLL+G SR EAFEASAEF+E++ GTIKQWELEYRTKGHIV
Sbjct: 1 MMETYQACVEQDQLAFAGWHVRALSSAMFDAAREVDRHEKDWRQAFLKRQSNRGVRRTEALGKLANHRSQLEKAALASAARKAGWEKGVEYFRAVVKECQSAVAATSAGLDETMDVSHAQAGKLLIKALALRAVYSKLLEGVSRREAFEASAEFVEMSEGTIKQWELEYRTKGHIV 176
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 280 bits (717), Expect = 4.520e-85 Identity = 160/282 (56.74%), Postives = 187/282 (66.31%), Query Frame = 1
Query: 7 GVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCD-RYATLSKDTSKVEPAPPRTKRPRDCCLQDLSCGRDHCHTPPAK-RAAPAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKLLIKVLALRGVYSKLLKGASRLEAFEASAEFLEVAAGTIKQWELEYRTKGHIVV 846
G RW + IK PK RDWAAE AA WRPS + E APPR KRPRDC S P AK A G+GRPKGS+G KR+ E +E+GQ A + RDL MLDA EV +H++VW PAFLKRQSNRGV R EALRKLAKHRSQLEKAA A+ AC++GWE+G +YFRAV+KEC+SAVAATSAGL+ES+ VSHAQAG L K LAL+ VY KLLKGA + +AFE +AEF EVA T+++WEL YRTKGHI V
Sbjct: 54 GSEQRWCSPYIKCPKGRNTGRDWAAEDRFAATWRPSFSSGNVPHTDASAGEAEAAPPREKRPRDCRHAAASTE----DAPAAKVGGARPGSGRPKGSYGWKRVREAAQQLNDYIERGQPHCALIASRDLPGDMLDAVKEVHQHQEVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNESVLVSHAQAGSLQFKALALKAVYHKLLKGAPKRQAFEDTAEFFEVADSTLREWELSYRTKGHIQV 331
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: D7FMZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ0_ECTSI) HSP 1 Score: 237 bits (605), Expect = 5.870e-76 Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 1
Query: 268 GAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECRSAVAATSAGLDES 654
GAGRPKG FGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHE+VWRPAFLKRQSNRGVRRAEALRKL KHRSQLEKAALAATACKAGWEKG+EYFRAVVKECRSAVAATSAGLD S
Sbjct: 22 GAGRPKGRFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEEVWRPAFLKRQSNRGVRRAEALRKLTKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECRSAVAATSAGLDSS 150
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: A0A6H5K534_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K534_9PHAE) HSP 1 Score: 240 bits (613), Expect = 5.400e-74 Identity = 141/282 (50.00%), Postives = 171/282 (60.64%), Query Frame = 1
Query: 7 GVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSK-VEPAPPRTKRPRDCCLQDLSCGRDHCHTPPAKRA-APAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKLLIKVLALRGVYSKLLKGASRLEAFEASAEFLEVAAGTIKQWELEYRTKGHIVV 846
G RW + K+PK RDWAAE AA WRP C + ++ E APPR K DC S G PP KR A GAGRPKGS+GRKRL + +E+G+L+ A M RDL AM DA E + E+ RPAFLKRQSNRG LEKAA A+ AC++GWE+G +YFR V+KEC+SAVA TSAGL+ES+ VSH QAG L K LAL G+Y KLL+G S+ +AFE +AEF EVA T+++WEL YRTKGHI V
Sbjct: 63 GSRQRWCSPYNKFPKGRTTGRDWAAEDRWAATWRPFFCSGNVPHNDVRAREAEAAPPREKWQPDCQHAAESTG----DAPPGKRGGARPGAGRPKGSYGRKRLRQAAQQLNDDLERGKLQCAQMVSRDLPGAMSDAVKEAHQQEEACRPAFLKRQSNRG----------------LEKAAAASAACRSGWERGQDYFRVVIKECQSAVAVTSAGLNESVLVSHTQAGSLQFKALALNGLYHKLLRGVSKRQAFEETAEFFEVAFSTLREWELSYRTKGHIQV 324
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 244 bits (624), Expect = 2.000e-72 Identity = 137/240 (57.08%), Postives = 169/240 (70.42%), Query Frame = 1
Query: 130 ATLSKDTSKVEPAPPRTKRPRDCCLQDLSCGRDHCHTPPAKRA-APAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKLLIKVLALRGVYSKLLKGASRLEAFEASAEFLEVAAGTIKQWELEYRTKGHIVV 846
ATL+ + E PPR KRPRDC S G PP KR A GAGRPKGS+GR RL + +E+GQL+ A M RDL AMLDA E + E V+RPAFLKRQSNRG+ R EALRKLAKH+SQL+K A A+ AC++GWE+G RAV+KEC+SA+A TSAGL+ES+ VSH+QAG L K LA +G+Y KLL+G S+ +AFE +AEF EVA+ T+++WEL YRTKGHI V
Sbjct: 15 ATLAHRGGEAEVTPPREKRPRDCQHAAESTG----DAPPGKRGGARPGAGRPKGSYGRNRLRQAAQQLNGYLERGQLQCAQMVSRDLPGAMLDAVKEAHQQEVVYRPAFLKRQSNRGLGRKEALRKLAKHQSQLQKEAAASAACRSGWERGQGCLRAVIKECQSAIAVTSAGLNESVLVSHSQAGSLQFKALARKGLYHKLLRGVSKRQAFEETAEFFEVASSTLREWELSYRTKGHIQV 250
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Match: D7G1V5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V5_ECTSI) HSP 1 Score: 228 bits (580), Expect = 5.040e-72 Identity = 118/150 (78.67%), Postives = 132/150 (88.00%), Query Frame = 1
Query: 397 MLDAAVEVDKHEDVWRPAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAATACKAGWEKGMEYFRAVVKECRSAVAATSAGLDESMDVSHAQAGKLLIKVLALRGVYSKLLKGASRLEAFEASAEFLEVAAGTIKQWELEYRTKGHIVV 846
ML A+ EVDKHE W+PAFLKRQSNRGV R EALRKLAKHRSQLEKA+LA+ ACKAGWEKG+EYFRAV KEC AVAATSAGL+E++DVSHAQAGKLL + ALR VYSKLL+G S+ +AFE SAEFLE+A GTIKQWELEYRTKGHIV+
Sbjct: 1 MLAASQEVDKHEKDWQPAFLKRQSNRGVGRKEALRKLAKHRSQLEKASLASAACKAGWEKGLEYFRAVAKECNGAVAATSAGLEETIDVSHAQAGKLLTQAQALRAVYSKLLQGVSKRQAFEGSAEFLELAVGTIKQWELEYRTKGHIVL 150 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12432.1873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12432.1873.1 >prot_E-fasciculatus_F_contig12432.1873.1 ID=prot_E-fasciculatus_F_contig12432.1873.1|Name=mRNA_E-fasciculatus_F_contig12432.1873.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=290bp LGGVTTRWRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTback to top mRNA from alignment at E-fasciculatus_F_contig12432:341..1585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12432.1873.1 ID=mRNA_E-fasciculatus_F_contig12432.1873.1|Name=mRNA_E-fasciculatus_F_contig12432.1873.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1245bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12432:341..1585+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12432:341..1585+ >mRNA_E-fasciculatus_F_contig12432.1873.1 ID=mRNA_E-fasciculatus_F_contig12432.1873.1|Name=mRNA_E-fasciculatus_F_contig12432.1873.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1740bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12432:341..1585+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |