mRNA_E-fasciculatus_F_contig1239.1838.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1239.1838.1
Unique NamemRNA_E-fasciculatus_F_contig1239.1838.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: D7FQD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD4_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 1.560e-119
Identity = 187/213 (87.79%), Postives = 195/213 (91.55%), Query Frame = 3 
Query:   96 MASRITESKLQEITDCFNEFSDNKRYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSYWIPTVREHDDQPASNRAATAKGTPPRASLLSRAQRT---PETKKHEALVEEEFDEASTLLCGDFFSL 725
            MASRITESKLQEI+DCFNEFSDNK YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEE+RQIFKAFDRGCRGFITRDDLRQVL+EV SES+MPPVKVAEMFSEADWDG+GRV     WIPT+REHDDQPASN A TAKGTPP+ASLL+RAQRT   PETKKH ALV EE DEASTLLC  FF L
Sbjct:    1 MASRITESKLQEISDCFNEFSDNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVD----WIPTIREHDDQPASNGAGTAKGTPPQASLLNRAQRTVSQPETKKHGALVGEEVDEASTLLCSAFFPL 209
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: A0A6H5JF19_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF19_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.310e-38
Identity = 69/75 (92.00%), Postives = 74/75 (98.67%), Query Frame = 3 
Query:  291 MSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGR 515
            MSRDMFVESMGRRLALVDPAE++RQIFKAFDRGCRGFITRDDLRQVL+EV SES+MPPVKVAEMFSEADWDG+GR
Sbjct:    1 MSRDMFVESMGRRLALVDPAEDLRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGR 75
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: A0A7M7HGX1_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HGX1_STRPU)

HSP 1 Score: 101 bits (252), Expect = 7.760e-22
Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = 3 
Query:  132 ITDCFNEFS-DNKRYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSY 533
            +   FNE   D K +L ++DLKVAV  L+G++PSKF+V +++     ++   PGM+ + F+ +M  +LA +DP E +RQIF AFD  CRGF+T +D+ +    V  +  + P +V + FSE D DG GRV  R +
Sbjct:    2 LESTFNECDEDEKGFLSREDLKVAVVRLIGYKPSKFEVDELM-----KNIDGPGMTSNEFISAMKPKLAALDPDEHIRQIFVAFDSKCRGFLTMEDVEKACKLVAPK--IQPHRVQKAFSELDGDGDGRVSYRDF 129
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: UPI001EEC951A (EF-hand calcium-binding domain-containing protein 11 isoform X6 n=4 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEC951A)

HSP 1 Score: 101 bits (252), Expect = 1.530e-21
Identity = 57/145 (39.31%), Postives = 83/145 (57.24%), Query Frame = 3 
Query:  105 RITESKLQEITDCFNEFS-DNKRYLDKDDLKVAVTALLGFRPSKFDVQQML-ALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSY 533
            RIT +  ++    F++   + K YL ++DLK+AV  L G++PSK +   ML A AT   P CPG+S + FV  MGR+L+  DP E+ R+IF+AFD  CRGF+  +D R   A V+    +P   V E F   D D  G +  + +
Sbjct:   16 RITAADRRKFVSVFDQCDVEKKSYLSREDLKIAVVMLFGYKPSKSETSMMLEACAT---PNCPGVSLEQFVSLMGRKLSAGDPYEKTRRIFRAFDLHCRGFLKVEDFRSAFARVVPR--LPERTVLEAFRHVDHDSDGHISFKDF 155
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: A0A8C9RT06_SCLFO (EF-hand calcium binding domain 11 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RT06_SCLFO)

HSP 1 Score: 99.4 bits (246), Expect = 9.610e-21
Identity = 52/144 (36.11%), Postives = 82/144 (56.94%), Query Frame = 3 
Query:  105 RITESKLQEITDCFNEFSDNKR-YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSY 533
            +IT+S  ++    F +  + ++ YL ++DLKVAV  L G++PSK +   ++      D   PG+  D+FV  MGR+L+++DP E+ R IF AFD  CRGF+T +D R+  + V     +P   + E F E D D  G +  R +
Sbjct:   14 KITDSDKKKFAMVFQQCDEGRKGYLSREDLKVAVVQLFGYKPSKMETNSLMEPVLKAD--LPGVPLDLFVSLMGRKLSVLDPYEKTRHIFNAFDAHCRGFLTLEDFRRAFSRVAPR--LPDRTIQEAFREVDRDSDGHISFRDF 153
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: W5MRE1_LEPOC (EF-hand calcium binding domain 11 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MRE1_LEPOC)

HSP 1 Score: 99.0 bits (245), Expect = 1.280e-20
Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  105 RITESKLQEITDCFNEFSDNKR-YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSYWIPTVREHDDQ 566
            +I+E+ +++ T  F +  ++K+ YLD++DLK+A+  L G++PSK +    L L        PG+  D F+  MGR+L++ DP E+ RQIF AFD  CRGF+T +D R+  + V    D     V E F E D D  G +  +          DD+
Sbjct:   14 KISETDIKKFTSVFQQCDESKKGYLDREDLKIAIVMLFGYKPSKSETD--LLLHPVLQANLPGVPLDHFINLMGRKLSVQDPFEKTRQIFTAFDVHCRGFLTLEDFRKAFSSVAHLQDQT---VQEAFREVDRDSDGHISFKDLESVLTYGQDDR 163
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: UPI001402C7B1 (EF-hand calcium-binding domain-containing protein 11 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402C7B1)

HSP 1 Score: 97.4 bits (241), Expect = 3.840e-20
Identity = 59/147 (40.14%), Postives = 81/147 (55.10%), Query Frame = 3 
Query:  105 RITESKLQEITDCFNEFSDNKR-YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEV---LSESDMPPVKVAEMFSEADWDGTGRVGTRSY 533
            R+T+S+       F E   ++  YL ++DLKVAV ++ G++PSK +   ML  +  ED   PG+  D F   M  +LA +DP EE RQIF AFD  CR F+T +D ++  A+V   LSE       V E F E D D  GRV  R +
Sbjct:   10 RVTDSEKSRCAAVFRECDSSRSGYLSREDLKVAVVSMFGYKPSKMETD-MLMTSVPEDNHLPGLPLDQFTSLMCSKLAAMDPYEESRQIFSAFDVHCRSFLTVEDFKRAFAKVAPHLSEQT-----VLEAFREVDRDSDGRVSFRDF 150
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: A0A7J6ANS1_AMEME (Uncharacterized protein n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J6ANS1_AMEME)

HSP 1 Score: 97.4 bits (241), Expect = 4.270e-20
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 3 
Query:  159 DNKRYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSY 533
            D K YL ++D+KVAV  L G++PSK +   ++       P CPG+  + FV  MGR+L+  DP E+ RQIF AFD  CRGF+  +D R V A V     +P   V E F   D D  G +  + +
Sbjct:   30 DKKGYLSREDVKVAVVMLFGYKPSKSETSMLMEAGAV--PTCPGVPLEQFVSLMGRKLSAGDPYEKTRQIFSAFDLHCRGFLKLEDFRSVFARVAPR--LPERTVLEAFRHVDHDSDGHISFKDF 150
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BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: UPI001BB1A9ED (EF-hand calcium-binding domain-containing protein 11-like isoform X1 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1A9ED)

HSP 1 Score: 96.7 bits (239), Expect = 6.810e-20
Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 3 
Query:   93 EMASRITESKLQEITDCFNEFS-DNKRYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSY 533
            E  SR  E   Q+    F++   DNK +L ++D+KVAV  L G++PSKF+V +++     ++   PGM+ + F  +M  +LA  DP E++RQIF AFD  CRGF+T +D+ +    V  +  + P  + + FSE D DG GRV  R +
Sbjct:    3 EAVSRDPEFPGQDHVTIFHDVDEDNKGFLSREDVKVAVVRLFGYKPSKFEVDELM-----KNIDGPGMTLNEFKSAMKPKLAAQDPDEKIRQIFVAFDSKCRGFLTLEDVEKACKLVAPK--IQPHHIQKAFSELDGDGDGRVSYRDF 143
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Match: A0A2D0RND8_ICTPU (EF-hand calcium-binding domain-containing protein 11 isoform X2 n=4 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0RND8_ICTPU)

HSP 1 Score: 95.9 bits (237), Expect = 1.700e-19
Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 3 
Query:  159 DNKRYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCRGFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSY 533
            + K YL ++D+KVAV  L G++PSK +   ++       P CPG+  + FV  MGR+L+  DP E+ RQIF AFD  CRGF+  +D R V A V     +P   V E F   D D  G +  + +
Sbjct:   35 EKKGYLSREDVKVAVVMLFGYKPSKSETSMLMEAGAV--PTCPGVPLEQFVSLMGRKLSAGDPYEKTRQIFSAFDLHCRGFLKLEDFRSVFARVAPR--LPERTVLEAFRHVDHDSDGHISFKDF 155
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1239.1838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQD4_ECTSI1.560e-11987.79EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JF19_9PHAE2.310e-3892.00EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7M7HGX1_STRPU7.760e-2240.74Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]
UPI001EEC951A1.530e-2139.31EF-hand calcium-binding domain-containing protein ... [more]
A0A8C9RT06_SCLFO9.610e-2136.11EF-hand calcium binding domain 11 n=1 Tax=Scleropa... [more]
W5MRE1_LEPOC1.280e-2035.48EF-hand calcium binding domain 11 n=1 Tax=Lepisost... [more]
UPI001402C7B13.840e-2040.14EF-hand calcium-binding domain-containing protein ... [more]
A0A7J6ANS1_AMEME4.270e-2040.00Uncharacterized protein n=1 Tax=Ameiurus melas Tax... [more]
UPI001BB1A9ED6.810e-2038.51EF-hand calcium-binding domain-containing protein ... [more]
A0A2D0RND8_ICTPU1.700e-1939.20EF-hand calcium-binding domain-containing protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1239contigE-fasciculatus_F_contig1239:4249..10204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.2
Seed ortholog evalue3.1e-98
Seed eggNOG ortholog2880.D7FQD4
Preferred nameEFCAB11
KEGG koko:K02183,ko:K16465
KEGG Pathwayko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
GOsGO:0003674,GO:0005488,GO:0005509,GO:0043167,GO:0043169,GO:0046872
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0027@2759
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons7
Model size1584
Cds size930
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927745.2739556-UTR-E-fasciculatus_F_contig1239:4248..48071622927745.2739556-UTR-E-fasciculatus_F_contig1239:4248..4807Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1239 4249..4807 -
1695995676.5203505-UTR-E-fasciculatus_F_contig1239:4248..48071695995676.5203505-UTR-E-fasciculatus_F_contig1239:4248..4807Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1239 4249..4807 -
1622927745.3801656-UTR-E-fasciculatus_F_contig1239:10109..102041622927745.3801656-UTR-E-fasciculatus_F_contig1239:10109..10204Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1239 10110..10204 -
1695995676.6005058-UTR-E-fasciculatus_F_contig1239:10109..102041695995676.6005058-UTR-E-fasciculatus_F_contig1239:10109..10204Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1239 10110..10204 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927745.2872279-CDS-E-fasciculatus_F_contig1239:4807..51911622927745.2872279-CDS-E-fasciculatus_F_contig1239:4807..5191Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 4808..5191 -
1695995676.534813-CDS-E-fasciculatus_F_contig1239:4807..51911695995676.534813-CDS-E-fasciculatus_F_contig1239:4807..5191Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 4808..5191 -
1622927745.2969246-CDS-E-fasciculatus_F_contig1239:6266..63761622927745.2969246-CDS-E-fasciculatus_F_contig1239:6266..6376Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 6267..6376 -
1695995676.5438864-CDS-E-fasciculatus_F_contig1239:6266..63761695995676.5438864-CDS-E-fasciculatus_F_contig1239:6266..6376Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 6267..6376 -
1622927745.3102129-CDS-E-fasciculatus_F_contig1239:6804..69101622927745.3102129-CDS-E-fasciculatus_F_contig1239:6804..6910Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 6805..6910 -
1695995676.551662-CDS-E-fasciculatus_F_contig1239:6804..69101695995676.551662-CDS-E-fasciculatus_F_contig1239:6804..6910Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 6805..6910 -
1622927745.3282263-CDS-E-fasciculatus_F_contig1239:7316..74531622927745.3282263-CDS-E-fasciculatus_F_contig1239:7316..7453Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 7317..7453 -
1695995676.5596983-CDS-E-fasciculatus_F_contig1239:7316..74531695995676.5596983-CDS-E-fasciculatus_F_contig1239:7316..7453Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 7317..7453 -
1622927745.3387012-CDS-E-fasciculatus_F_contig1239:8731..87861622927745.3387012-CDS-E-fasciculatus_F_contig1239:8731..8786Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 8732..8786 -
1695995676.5681124-CDS-E-fasciculatus_F_contig1239:8731..87861695995676.5681124-CDS-E-fasciculatus_F_contig1239:8731..8786Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 8732..8786 -
1622927745.352247-CDS-E-fasciculatus_F_contig1239:9317..93821622927745.352247-CDS-E-fasciculatus_F_contig1239:9317..9382Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 9318..9382 -
1695995676.5773904-CDS-E-fasciculatus_F_contig1239:9317..93821695995676.5773904-CDS-E-fasciculatus_F_contig1239:9317..9382Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 9318..9382 -
1622927745.3650072-CDS-E-fasciculatus_F_contig1239:10036..101091622927745.3650072-CDS-E-fasciculatus_F_contig1239:10036..10109Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 10037..10109 -
1695995676.5875576-CDS-E-fasciculatus_F_contig1239:10036..101091695995676.5875576-CDS-E-fasciculatus_F_contig1239:10036..10109Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1239 10037..10109 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1239.1838.1prot_E-fasciculatus_F_contig1239.1838.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1239 4808..10109 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1239.1838.1

>prot_E-fasciculatus_F_contig1239.1838.1 ID=prot_E-fasciculatus_F_contig1239.1838.1|Name=mRNA_E-fasciculatus_F_contig1239.1838.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=310bp
MASRITESKLQEITDCFNEFSDNKRYLDKDDLKVAVTALLGFRPSKFDVQ
QMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEEVRQIFKAFDRGCR
GFITRDDLRQVLAEVLSESDMPPVKVAEMFSEADWDGTGRVGTRSYWIPT
VREHDDQPASNRAATAKGTPPRASLLSRAQRTPETKKHEALVEEEFDEAS
TLLCGDFFSLSSSCSSSAGTFTTSHLLLLVLLLLFSGGGGAPLLLLQCVV
VEIATGGGGLVVVLPSPRHPALSLLVVISPSTADSCGDACVADCSSALLR
SSRLLRRGC*
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mRNA from alignment at E-fasciculatus_F_contig1239:4249..10204-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1239.1838.1 ID=mRNA_E-fasciculatus_F_contig1239.1838.1|Name=mRNA_E-fasciculatus_F_contig1239.1838.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5956bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1239:4249..10204- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGGTAGCGGCGGGGTGGGGTCGAACGGCACGAAACCGCACACAGTCTTC
GCCCGCACACACGAGAGACACGCCACGTATCGTGTCCGTGAGGAGATGGC
ATCCCGAATAACAGAGTCAAAGCTGCAAGAGATCACCGACTGTTTCAACG
AATTCAGCGACAACAAGCGTGAGTGTCGCAACCGGTGTAGTAGATGTCGT
AGATAGATGTACCGTACAGCCCACTAGTACGGCTGGGACCTGTTCCATTT
GAGGAGGGGCCCCTTGGAGCAGATCCAAGGACTTCAGCACATCCCTTCCA
ACATATTTATCACACCGGTAATCTTTCTTTGATGGTACTGCTGTATCAAG
CACTGCTATATCCAAAGATACAGATCATAGCATCCGTCCCCCGTAGGCTA
GCTACATGTGATGTTTCCCTCGCAATACCCGTTGTCTTGTTCTGAGTCGT
TGCCCTAAACTACTTGTCTGTGGCGATTTGTACAGAGTAGTTCGTAGCAG
CTGCTCCAGTCGCTTGTTCGGACGTTAGTCAAACAAAACTTCACGGATTT
GACTAACGACGGTACAGCACGAGTTGAGGTCGAGGTTCTACCGCTCGCTG
TAAGATAATATTTAGTAGATCTACACTGTTGTACATGGTATGTGCCTACG
TTGCAGGAACCGACTCTTCCACTCAACCCTGCATTCTAGATGCGTTTTGC
TGTGCTCGCACGATTTATAGCTCATGTGCGCCAGCAGTATGTAGTCTTCT
GCGTAGGAGAACCACCCTGATCCCCAAAGCGTTGTTTTATCTCTACAACA
CTCTCTCTATTTCCCGACACAGGCTACCTGGACAAGGACGATCTCAAGGT
GGCGGTGACTGCCCTGCTGGGATTTCGTCCGTCGAAGGTACGAACTAACG
TCTGCATCTATTACTGATCCGGAGTGACGAAGCCGCGGAACAGATGGTGA
TTCGAAAACGTCCATCAGAGTTCAGACGGAAATTCGAGTACGTTAGTGGT
TTGATAGGAACGAACGCTCGCCAATATGTCCAGGTAGAAAAACGAGGTCT
CGGGGGGTTCACAGCCTGAGCTGGAAGAGAGGAAGGGAAATATGAAAGTA
CGATGATCCTCGTACCGTCGCTGTACCAGCGTGCAGACTTCCATACCCAG
GGGTTGCGAAAGGATGCTTTTGAGTATCGATTTTGTGATGAATATATCCT
GGCTGGGTGGATGTGTGTGCCTTTGTTTTGTCTCTTTTTTTTCTGAGTTT
CACCGACGGAGCAGTCTACACGTGCGATGCGGTATTGCAGTTGTTTTTCC
TTTCCTGTATTTTTCTGGCGTATATTGAGTTCGCATGTTGCTAGCAGGAC
GGCTGTCACTCGCTAAACGAGGCATGTTTGTTCGTCGCTTGCAATCTCCC
TCTTTGCGTGCGATGCAGTTCGATGTGCAACAAATGCTAGCTTTGGCAAC
GGCAGAGGATCCGCAATGTCCAGGTAACCGAAATATCAAGATGCCGACTG
TCGGTACAGAAGTCCAGAGTATTAAAAATGCCTTGATTTCTCGTCAAGCC
CAACACCCCTCGTACAGTACACGTGTTGATTTTGGCAGAAATGCCCACAA
GTCCTCATGCTATGGCATGGCAGGTGGAGTATGACCGTAGAGTTTATCTG
ACGTTTATCCTCGATGGAAACCTTCTTTGCTCGAGTAGGACTACAATACC
GAAAGCACCCTATGTGTCGTGAAGGTTAAATGCCGTTTTTATCAGAGTCT
TCGCACGCTGTGTGTGATAATCTTTTTATCTATCGTTTCGCTCTGAGACT
TCTTCGCACACGGGTGTCAAGACTCCGGGTGTCAAGACTCCGATCCCATG
TGCCAAGACTCCGATCGGTGCCAAGACTTTCATTTGTGCCAAGGATCCCA
TACTTACGGTATTATTGGTGTGTAGAGATGACGTAGCCGCTGGTGCATAT
GACAAGTCTTGGCAAGGTGCGATCTGAGTGGAGTGTCTTGATCGCATCTT
GCCGACAGTTGGACAGCAAGAAACCCCGCTCTGGACATGACTCGTCCTAA
CCCACCTGCTGAGATAGGGAGCGGGGAGCCCTCCAACAGCTCGTCCCTCT
CTCTTCGGTGACACTCTACAATTGTATTTCTTCGGAGACCGTTCTCCTTG
TGAAAGCTCAGGAGATGAAACTGCCGGCCCCTTGGTAATGGGTGAATACT
GCGATGACCCAAAGGGTCCCCTTCTAACGAGGATAGGCTGTCCTTCGTAT
GCCCAAACGCGAAAACATGTTGTTTTTCACAGTGTCGATAGCATGTACGT
ATGTGCAATTAGTTCTTGGTGCCTCGCCGCGGTCGTGGCTAAAAAACGTC
CGTCATCGAAATAAATCACTTAGAATGCGATACATTGTGACATTGTCGTG
TCCTTCGCAATACTGTATAGGAGACACTCTGATGTGGCCTTCCACATCTG
ATTGTTTGAACGCACAGATGTTCGTAGTTGATCATACACAATGTACAGCA
TATATCCTTGTGCTGCCCTACTTTCGCAGTGCTCTTTGGGTGTTGAAAAA
TGGGCGGCTCGGAGCAGCGATAGCACACGTAAGGTGCTAAAAAAACGCAC
ACTCCCCACCAGGACAACCCAGACATGGCGTCACCTAACATTGCCTCCCT
GACAATCTTTTGTCGAAGTGTCCGCCGGTACGTCATCCTCAGAGAGTTAC
ACCGGCGTGGAACTCGCACGCCCTCTATCTGCTGCCTTTTTTCGCGGACA
GGGATGTCTAGAGATATGTTTGTCGAGTCCATGGGTCGTCGCCTTGCCCT
GGTCGACCCAGCGGAGGAAGTGCGCCAGATCTTCAAAGCCTTTGACAGAG
GATGCCGGGGCTTCATCACAAGGGATGATCTGCGGCAGGTGCGCGACGCG
TGAGCTGCTGCTCCTTCCCGTTCCGATAGCATGCAAGCAAGGATTGAGGG
TGCTCAACTTCGAAGTCGTTCTTCAATTTGTTGCATCCGATTGAGGACGA
AGCGAGATTTTTCTCCAGTAGTGCTCGTGGGGTCCGGAGGAGGTGGGAAC
GTTCCCGCTCTGATTCTGGTGTTCTTCACAGGCTTCCACCTGTCAGCAGT
GTATCATGAGCATGAGACGTTATCAGCGCCCCAACCAACGTCTTTTTAGG
AAAACACTCCCAGGTTGACTGGGCTAAGTCGTCGGTTCCATTGTGCCCAC
GAAAACGATGGCGTTTTTACATTCAGGGTTGGTGCACGTCTCACGTATTG
GTGGTACGTCATCGCTTCTCATGCATGTTCTGTACGATCAACAGGTCTTG
GCGGAAGTGCTCAGCGAGAGTGACATGCCGCCGGTCAAGGTCGCGGAGAT
GTTTTCGGAGGCTGATTGGGACGGAACCGGACGGGTGGGCACGAGATCCT
GTTCGAGTGCTTTGTGTCTTTCCACCTCCTAGCTCATTTGAACCCCGCCT
CTTTTTTACTGAGTGCACATCCGATCCGTCAAGTCGACGCGCCCCACAGA
CGCTTCTTCTGTGGTGTTTACACGACGACACTGGAGCTTAGAAAGCTGTA
CCAACTGTTGCGGGCAACGGCGTCGTGCGTGGCACCGCGGGGTTGACTTG
CCGTCTCGCGTTGACATGACGTAATCGTTCAAAAGTCATTTGCATGCGCA
CTCAGCGACAACAATGGCTGTTTTGGCGATGACTGTTGTGGGCCGGCTCT
ATTTACCTCTTACCACGTGTGTACGTCAACACGAAAAATCTTCTTTCTGC
AACACAGCAGCATCCCCCCGAAAATGTACCGTTGTGGCTATTTTGTGCCC
GTTTTATGAACCGTACTTTTGTGTGCAGATTGGATACCAACAGTTCGAGA
GCATGATGACCAACCGGCTTCCAACAGAGCTGCTACGGCGAAGGGAACGC
CGCCGCGGGCCAGCCTTCTGAGCAGGGCCCAGCGCACGGTAAGCCGTTTT
ATAGAGATCGCACACTGAGGGTCCGCCAGGGGCATGCAACGGAAAACGGG
GGCCTCACACGGAAGCATGACCACGTTTCGGCAATGGCGAGTGACACCTC
GTTGGTCCCATCTCAAATCTTTCGTCCAGATGTACGCACTGATTCTGGCC
TTTTCCCCCAAAAAACTCCTGCTTGATTTCCCCTGCCAGGCTGCGTGCGC
CACATGGTACCGGCACCCATGCACGATGTGTTTCAAAGGGAAAGTTTGAT
GCCCGCTTTGTCTCGCACATGATGCTGCACGCACGGCAGCAACCTGTAGA
TCATCCACAGCAACTCGTTGTAATTGTGTTTCGCCTCCAAGCCTGTGCCC
ACAGGACAGCATGAGCTTTACACCATCATGCTGCTTCTGCACGCAAACAC
GCAGCTGTACTCTTCTTCTTCTTTCTATCTTGTGCCTTGTTCTTGGTCGA
TGGCTTGTCTCCGATGCCAAGCTTAACGCGAAACGCCTCCCGAACCTTGT
TTTCCTCTTCTTCAAGGGCTACCCACAATGCAGTGGTCCGACTCTCCTCC
GCTGCCCCCCTCCCTTGTTCCATTTCCTTGGCGGCGCTCTTTTTCTTCTT
TGTTCCGGGCACGTTTCTCCGCTTTTGGTGCGTGGCTTTTCCCTTCACAC
CGGTAGTGGTAGCCATCGCCTTTTCCGTGCTCCTGTCTTGATGGTGCAAC
CCCTCCCCGGGAGACCATCGTCGGACCGACTCCTTCACGTTTCTTTTTTC
CTCCGCCTGCAAGATTGACCACTCCGCGAGTGCAGCTGCTGTGGTGGTGG
TGCCAGAGGCGCTTGATGGGCCTTGCTCCTTTGACGAAGCCTCCTGCGAC
GCCGATAGCTGAGATACGAGCCTCGACACGCTCACGGCGCCCGCCTTTGC
CCCGCCGGCAGATTTACTGACCTTCGCACGGTCATTTTTCGTCGTCGTGT
GTGGTGGAGGGTGATACATGCCGACGTGCTTGCCCTCGTTGATTTTCTGC
TGCTGCTGCTGATGCTGCTGCTGCTGCTCTCTGGCTTGTTCACGCTCTGT
CGAGGTAAGCCAGCCGGAGACCAAGAAGCATGAGGCGCTCGTGGAAGAGG
AGTTTGACGAAGCTTCGACGCTGTTGTGTGGAGATTTTTTCTCACTTTCC
TCCTCGTGTTCTTCCTCAGCCGGAACGTTCACCACATCACACCTGCTGCT
GCTAGTACTGCTGCTGCTGTTTTCCGGCGGGGGTGGTGCTCCGCTCCTAC
TGCTGCAATGTGTTGTTGTCGAGATCGCTACCGGTGGCGGTGGCCTTGTT
GTAGTGTTGCCTTCACCAAGGCATCCTGCCCTATCGTTGTTGGTAGTCAT
CTCCCCTTCCACGGCCGACAGCTGTGGTGATGCCTGTGTGGCCGATTGCA
GCTCTGCGTTACTGCGTTCGTCGAGACTACTTCGTCGCGGTTGCTGATAA
ATCTCCTCCGCCGGGACCAGTACACGAGAGGCTGGCGACATCGGCTTTTC
CGCAGGGGGACGTTCATTGGCGTTCGCATTACTTTCTTCCTTCTGCTGCG
CACGATGAAGCATCTTGGTGGCTTCGACGTTGCGAGGTTCGAGGGCAGTA
ACCGCTCGGAAATCGGTGGCGGCGTCCAGAGCCCTGCCCAAGGCTAGCCG
AGCCTGGCCGCGGCGAAAGAGCGCCTTGGCGCAGGAAGGTTGGATGTGGA
GTGCTCGAGAACAAGCTTCTTCTGCTTCGTGCATCGAGCCTAGCTTGATC
TGAGCGTAAGCAAGGTTGCAAAGGCAAGCTAGTTCTTGGCCTGGCCCCGT
GGCATCGCTCTTCGGGGTTGGCATCTGTGAGCAATGCGCGGGACAGAGGA
GAGGTAGGGAACATGGTGTTAGGGTCACCCGATTTCGCCTGCTTGCCGAA
AAGAGGGCACTTTCGGCCCATTACTGCTGTAGACTAGACTTATAGGAACC
TTCATGTCCAGATCATGCGTATGAGAGTGATTCTGACCACGGAATTGGGG
CGAGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1239:4249..10204-

>mRNA_E-fasciculatus_F_contig1239.1838.1 ID=mRNA_E-fasciculatus_F_contig1239.1838.1|Name=mRNA_E-fasciculatus_F_contig1239.1838.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1860bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1239:4249..10204- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCATCCCGAATAACAGAGTCAAAGCTGCAAGAGATCACCGACTGTTT
CAACGAATTCAGCGACAACAAGCATGGCATCCCGAATAACAGAGTCAAAG
CTGCAAGAGATCACCGACTGTTTCAACGAATTCAGCGACAACAAGCGCTA
CCTGGACAAGGACGATCTCAAGGTGGCGGTGACTGCCCTGCTGGGATTTC
GTCCGTCGAAGGCTACCTGGACAAGGACGATCTCAAGGTGGCGGTGACTG
CCCTGCTGGGATTTCGTCCGTCGAAGTTCGATGTGCAACAAATGCTAGCT
TTGGCAACGGCAGAGGATCCGCAATGTCCAGTTCGATGTGCAACAAATGC
TAGCTTTGGCAACGGCAGAGGATCCGCAATGTCCAGGGATGTCTAGAGAT
ATGTTTGTCGAGTCCATGGGTCGTCGCCTTGCCCTGGTCGACCCAGCGGA
GGAAGTGCGCCAGATCTTCAAAGCCTTTGACAGAGGATGCCGGGGCTTCA
TCACAAGGGATGATCTGCGGCAGGGATGTCTAGAGATATGTTTGTCGAGT
CCATGGGTCGTCGCCTTGCCCTGGTCGACCCAGCGGAGGAAGTGCGCCAG
ATCTTCAAAGCCTTTGACAGAGGATGCCGGGGCTTCATCACAAGGGATGA
TCTGCGGCAGGTCTTGGCGGAAGTGCTCAGCGAGAGTGACATGCCGCCGG
TCAAGGTCGCGGAGATGTTTTCGGAGGCTGATTGGGACGGAACCGGACGG
GTGGGCACGAGATCCTGTCTTGGCGGAAGTGCTCAGCGAGAGTGACATGC
CGCCGGTCAAGGTCGCGGAGATGTTTTCGGAGGCTGATTGGGACGGAACC
GGACGGGTGGGCACGAGATCCTATTGGATACCAACAGTTCGAGAGCATGA
TGACCAACCGGCTTCCAACAGAGCTGCTACGGCGAAGGGAACGCCGCCGC
GGGCCAGCCTTCTGAGCAGGGCCCAGCGCACGATTGGATACCAACAGTTC
GAGAGCATGATGACCAACCGGCTTCCAACAGAGCTGCTACGGCGAAGGGA
ACGCCGCCGCGGGCCAGCCTTCTGAGCAGGGCCCAGCGCACGCCGGAGAC
CAAGAAGCATGAGGCGCTCGTGGAAGAGGAGTTTGACGAAGCTTCGACGC
TGTTGTGTGGAGATTTTTTCTCACTTTCCTCCTCGTGTTCTTCCTCAGCC
GGAACGTTCACCACATCACACCTGCTGCTGCTAGTACTGCTGCTGCTGTT
TTCCGGCGGGGGTGGTGCTCCGCTCCTACTGCTGCAATGTGTTGTTGTCG
AGATCGCTACCGGTGGCGGTGGCCTTGTTGTAGTGTTGCCTTCACCAAGG
CATCCTGCCCTATCGTTGTTGGTAGTCATCTCCCCTTCCACGGCCGACAG
CTGTGGTGATGCCTGTGTGGCCGATTGCAGCTCTGCGTTACTGCGTTCGT
CGAGACTACTTCGTCGCGGTTGCTGACCGGAGACCAAGAAGCATGAGGCG
CTCGTGGAAGAGGAGTTTGACGAAGCTTCGACGCTGTTGTGTGGAGATTT
TTTCTCACTTTCCTCCTCGTGTTCTTCCTCAGCCGGAACGTTCACCACAT
CACACCTGCTGCTGCTAGTACTGCTGCTGCTGTTTTCCGGCGGGGGTGGT
GCTCCGCTCCTACTGCTGCAATGTGTTGTTGTCGAGATCGCTACCGGTGG
CGGTGGCCTTGTTGTAGTGTTGCCTTCACCAAGGCATCCTGCCCTATCGT
TGTTGGTAGTCATCTCCCCTTCCACGGCCGACAGCTGTGGTGATGCCTGT
GTGGCCGATTGCAGCTCTGCGTTACTGCGTTCGTCGAGACTACTTCGTCG
CGGTTGCTGA
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