mRNA_E-fasciculatus_F_contig12383.1836.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12383.1836.1
Unique NamemRNA_E-fasciculatus_F_contig12383.1836.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: D8LGK6_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK6_ECTSI)

HSP 1 Score: 479 bits (1232), Expect = 7.680e-167
Identity = 224/228 (98.25%), Postives = 226/228 (99.12%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEH 684
            V+ SEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALT AGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAIL+SGELYTWGGGEH
Sbjct:   53 VVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEH 280          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A2D4CB68_PYTIN (BTB domain-containing protein (Fragment) n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB68_PYTIN)

HSP 1 Score: 359 bits (921), Expect = 2.490e-119
Identity = 161/231 (69.70%), Postives = 195/231 (84.42%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+ ++DG VYTWGRGDDGRLGHGDNGWK+VPR+VE L G++I Q TCGSYHTAAVT  GEL+TWGGGMYGKLGHGNE+GH TPC+V+ L+ +  R  Q+ACGSRHTVVL +   VYTWGDKE GV GH + DGHQYLPR++E L+ + V Q++ACGFHTAALT++GE+FT+GEGKFGRLGH  ERNQ+V R VE L+GKRV  +ACGGFH+AA+ E+GE+ TWGGGEHGQ+
Sbjct:   44 VVLTDDGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKKIRQVTCGSYHTAAVTVSGELFTWGGGMYGKLGHGNETGHSTPCLVEALKAQPVR--QVACGSRHTVVLLENKDVYTWGDKEKGVSGHGDTDGHQYLPRVVEELRGQHVKQISACGFHTAALTESGEVFTFGEGKFGRLGHNSERNQLVARKVETLVGKRVKQIACGGFHTAAVTETGEVXTWGGGEHGQL 272          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: H3H2V0_PHYRM (BTB domain-containing protein n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3H2V0_PHYRM)

HSP 1 Score: 355 bits (912), Expect = 6.220e-118
Identity = 161/231 (69.70%), Postives = 194/231 (83.98%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+ +++G VYTWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  G+LYTWGGGMYGKLGHGNE+GH TP +V+ L+  G +V Q+ACGSRHTVVL +   VYTWGDKENGV GH + +GHQYLP  +E L+ K++ Q++ACGFHTAAL++ GE+FT+GEGKFGRLGH  ERNQ V R+VEAL GKRV  VACGGFH+AA+ E+GE+YTWGGGEHGQ+
Sbjct:   47 VVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLK--GMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARLVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQL 275          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: T0QPW3_SAPDV (BTB domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0QPW3_SAPDV)

HSP 1 Score: 353 bits (905), Expect = 8.700e-117
Identity = 160/231 (69.26%), Postives = 192/231 (83.12%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+  E+G VYTWGRGDDGRLGHGDNGWK+VPR+VEAL G+RI Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNESGH  P +V  L +   +V Q+ACGSRHTVVL +   VYTWGDKENGV GH + DGHQYLP  ++ L+ K++ Q+AACGFHTAAL++ GE++T+GEGKFGRLGH  ERNQ+V R+VE L GKR+  VACGGFH+AA+ ++GE++TWGGGEHGQ+
Sbjct:   53 VVLDENGDVYTWGRGDDGRLGHGDNGWKFVPRLVEALHGKRIKQVTCGSYHTAAVTVTGELYTWGGGMYGKLGHGNESGHSVPYLVDTLSNH--KVDQVACGSRHTVVLLENRDVYTWGDKENGVSGHGDTDGHQYLPCAVDELKDKSIMQIAACGFHTAALSEEGELYTFGEGKFGRLGHNSERNQLVARVVETLHGKRIKQVACGGFHTAAVTDTGEIFTWGGGEHGQL 281          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A8J5MCI4_9STRA (BTB domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MCI4_9STRA)

HSP 1 Score: 353 bits (907), Expect = 1.130e-116
Identity = 161/231 (69.70%), Postives = 192/231 (83.12%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+ +E+G VYTWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  G+LYTWGGGMYGKLGHGNE+GH TP +V+ L+    +V Q+ACGSRHTVVL +   VYTWGDKENGV GH + +GHQYLP  +E L+ K++ Q++ACGFHTAAL++ GE+FT+GEGKFGRLGH  ERNQ V R VEAL GKRV  VACGGFH+AA+ E+GE+YTWGGGEHGQ+
Sbjct:  142 VVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKS--MQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQL 370          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: B7G795_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G795_PHATC)

HSP 1 Score: 344 bits (883), Expect = 2.430e-116
Identity = 155/231 (67.10%), Postives = 187/231 (80.95%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+ + DG V+TWGRGDDGRLGHGDNGWKYVPR+ ++L GQ ++Q TCGSYHTAAVT  G+LYTWGGGMYGKLGHG+E+GH TP  V+ L   GA V QIACGSRHT ++T  G +YTWGDKENGV GH   +GHQYLPR+LES+ AK V Q++ACGFHTA +TDAGE+FTWGEGKFGRLGH  ERN   P +V+ ++GK+   V+CGGFH+A + E G LYT+GGGEHGQ+
Sbjct:   46 VVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQL 274          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A7S2R4V3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R4V3_9STRA)

HSP 1 Score: 342 bits (876), Expect = 4.210e-116
Identity = 155/231 (67.10%), Postives = 182/231 (78.79%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+ + +G VYTWGRGDDGRLGHGDNGWKYVPRI+ +L GQ I Q TCGSYHTAAV   G+LYTWGGGMYGKLGHGNESGH TP  ++ L   G  V+QIACGSRHT V+T  G +YTWGDKENGV GH + +GHQY P++LE L  K V Q++ACGFHT  LTD+ E++TWGEGKFGRLGHG ERN   PR+VE L+GK    V CGGFH+A I E G++YT+GGGEHGQ+
Sbjct:    3 VVLTTNGEVYTWGRGDDGRLGHGDNGWKYVPRIILSLAGQVICQVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPKRLEGLT--GLTVSQIACGSRHTAVITSTGAMYTWGDKENGVAGHGDNEGHQYTPKLLEKLAGKRVIQLSACGFHTGCLTDSREVYTWGEGKFGRLGHGAERNCHSPRLVEVLLGKNPKQVTCGGFHTAVITEDGKMYTFGGGEHGQL 231          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A5D6YMT2_9STRA (BTB domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMT2_9STRA)

HSP 1 Score: 351 bits (901), Expect = 4.950e-116
Identity = 160/231 (69.26%), Postives = 190/231 (82.25%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+ +E+G V+TWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  G+LYTWGGGMYGKLGHGNE+GH TP +V+ L+  G +V Q+ACGSRHTVVL +   VYTWGDKENGV GH   +G QYLP  LE L+ K+V Q++ACGFHTAALTDAGE++T+G+GKFGRLGH  ERNQ V R V+ L  KRV  VACGGFH+AA+ E+GE+YTWGGGEHGQ+
Sbjct:   66 VVLTEEGEVFTWGRGDDGRLGHGDNGWKFVPRLVEELRGRNIRQVTCGSYHTAAVTVAGDLYTWGGGMYGKLGHGNETGHSTPFLVESLK--GLQVRQVACGSRHTVVLLENRDVYTWGDKENGVSGHGETEGQQYLPSSLEELRGKSVKQISACGFHTAALTDAGEVYTFGDGKFGRLGHNSERNQAVARFVDGLADKRVRQVACGGFHTAAVTETGEVYTWGGGEHGQL 294          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A1V9ZGJ4_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGJ4_9STRA)

HSP 1 Score: 357 bits (916), Expect = 1.450e-115
Identity = 161/231 (69.70%), Postives = 192/231 (83.12%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+  EDG VYTWGRGDDGRLGHGDNGWK+VPR+VE+L G+RI Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNESGH  P +V  L +   +V Q+ACGSRHTVVL +   VYTWGDKENGV GH + DGHQYLP  ++ L+ K++ Q+AACGFHTAAL+D GE++T+GEGKFGRLGH  ERNQ+V RMVE L G+R+  VACGGFH+AA+ ++GE++TWGGGEHGQ+
Sbjct:  288 VVLDEDGNVYTWGRGDDGRLGHGDNGWKFVPRLVESLHGKRIKQVTCGSYHTAAVTSTGELYTWGGGMYGKLGHGNESGHSVPYLVSTLSNH--KVDQVACGSRHTVVLLENRDVYTWGDKENGVSGHGDTDGHQYLPCAVDELKDKSIMQIAACGFHTAALSDKGELYTFGEGKFGRLGHNSERNQLVARMVETLSGRRIKQVACGGFHTAAVTDTGEVFTWGGGEHGQL 516          
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A6V2KK16_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2KK16_9STRA)

HSP 1 Score: 352 bits (903), Expect = 2.050e-115
Identity = 160/231 (69.26%), Postives = 185/231 (80.09%), Query Frame = 1
Query:    1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
            V+ + DG VYTWGRGDDGRLGHGDNGWKYVPRI ++L GQ IVQ TCGSYHTAAV   G+LYTWGGGMYGKLGHGNESGH TP  V+ L   G  V+QIACGSRHT V+T  G +YTWGDKENGV GH + +GHQY P++LE L  K V Q++ACGFHT  LTDA E+FTWGEGKFGRLGHG ERN   PR+VE L+GK+   VACGGFH+A I + G++YT+GGGEHGQ+
Sbjct:  131 VVLTTDGEVYTWGRGDDGRLGHGDNGWKYVPRIAQSLAGQVIVQVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEGL--VGLTVSQIACGSRHTAVITSTGALYTWGDKENGVAGHGDTEGHQYTPKLLERLAGKRVVQLSACGFHTGCLTDAAEVFTWGEGKFGRLGHGAERNCHSPRLVEVLLGKKPRQVACGGFHTAVITDDGKMYTFGGGEHGQL 359          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK6_ECTSI7.680e-16798.25BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2D4CB68_PYTIN2.490e-11969.70BTB domain-containing protein (Fragment) n=2 Tax=P... [more]
H3H2V0_PHYRM6.220e-11869.70BTB domain-containing protein n=26 Tax=Peronospora... [more]
T0QPW3_SAPDV8.700e-11769.26BTB domain-containing protein n=4 Tax=Saprolegniac... [more]
A0A8J5MCI4_9STRA1.130e-11669.70BTB domain-containing protein n=1 Tax=Phytophthora... [more]
B7G795_PHATC2.430e-11667.10Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A7S2R4V3_9STRA4.210e-11667.10Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A5D6YMT2_9STRA4.950e-11669.26BTB domain-containing protein n=1 Tax=Pythium bras... [more]
A0A1V9ZGJ4_9STRA1.450e-11569.70Regulator of chromosome condensation (RCC1) n=1 Ta... [more]
A0A6V2KK16_9STRA2.050e-11569.26Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12383contigE-fasciculatus_F_contig12383:36..3512 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score478.4
Seed ortholog evalue1.9e-132
Seed eggNOG ortholog2880.D8LGK6
KEGG koko:K11494
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBTB/POZ
Ec32 orthologEc-10_001680.1
Exons6
Model size693
Cds size693
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12383.1836.1prot_E-fasciculatus_F_contig12383.1836.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12383 36..3512 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927745.0678184-CDS-E-fasciculatus_F_contig12383:35..1671622927745.0678184-CDS-E-fasciculatus_F_contig12383:35..167Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 36..167 +
1695995676.3789127-CDS-E-fasciculatus_F_contig12383:35..1671695995676.3789127-CDS-E-fasciculatus_F_contig12383:35..167Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 36..167 +
1622927745.0819798-CDS-E-fasciculatus_F_contig12383:1075..11561622927745.0819798-CDS-E-fasciculatus_F_contig12383:1075..1156Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 1076..1156 +
1695995676.38967-CDS-E-fasciculatus_F_contig12383:1075..11561695995676.38967-CDS-E-fasciculatus_F_contig12383:1075..1156Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 1076..1156 +
1622927745.0927439-CDS-E-fasciculatus_F_contig12383:1364..14931622927745.0927439-CDS-E-fasciculatus_F_contig12383:1364..1493Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 1365..1493 +
1695995676.3993719-CDS-E-fasciculatus_F_contig12383:1364..14931695995676.3993719-CDS-E-fasciculatus_F_contig12383:1364..1493Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 1365..1493 +
1622927745.1070414-CDS-E-fasciculatus_F_contig12383:2156..23341622927745.1070414-CDS-E-fasciculatus_F_contig12383:2156..2334Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 2157..2334 +
1695995676.407543-CDS-E-fasciculatus_F_contig12383:2156..23341695995676.407543-CDS-E-fasciculatus_F_contig12383:2156..2334Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 2157..2334 +
1622927745.119238-CDS-E-fasciculatus_F_contig12383:2992..30541622927745.119238-CDS-E-fasciculatus_F_contig12383:2992..3054Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 2993..3054 +
1695995676.4192042-CDS-E-fasciculatus_F_contig12383:2992..30541695995676.4192042-CDS-E-fasciculatus_F_contig12383:2992..3054Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 2993..3054 +
1622927745.131323-CDS-E-fasciculatus_F_contig12383:3401..35121622927745.131323-CDS-E-fasciculatus_F_contig12383:3401..3512Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 3402..3512 +
1695995676.436263-CDS-E-fasciculatus_F_contig12383:3401..35121695995676.436263-CDS-E-fasciculatus_F_contig12383:3401..3512Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12383 3402..3512 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12383.1836.1

>prot_E-fasciculatus_F_contig12383.1836.1 ID=prot_E-fasciculatus_F_contig12383.1836.1|Name=mRNA_E-fasciculatus_F_contig12383.1836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=231bp
VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSY
HTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIA
CGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVT
QVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKR
VGHVACGGFHSAAILESGELYTWGGGEHGQV
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mRNA from alignment at E-fasciculatus_F_contig12383:36..3512+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12383.1836.1 ID=mRNA_E-fasciculatus_F_contig12383.1836.1|Name=mRNA_E-fasciculatus_F_contig12383.1836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3477bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12383:36..3512+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCTTGTTCTCAGAGGATGGCGCTGTGTACACGTGGGGGCGGGGGGACGA CGGTCGTCTCGGTCACGGAGACAACGGCTGGAAGTACGTGCCAAGGATCG TGGAGGCGCTGGAAGGGCAGCGAATCGTGCAGGTATGTGGTTTGACCGCT GCGAGGGAGAACAGCCGGGCTAGAGCGCTGTGGCTTGCCGTCGAGTCGGG GCTTGGAGGTTGGTGCGGCCGTAAGTGTGTGGGGGAGGTGCCCATAGCCG TGCATGCCGTAGTCGTTAGACAATTGACCTCGCATCCCTACAAAGCCGGG ACGGAGCAAGCCGGGTTGAAAAAGTGGGGGTTTACGTTTTTGAGAAGCGG ACTGATTCCCGGAGGGAGGCATGTCTTTGGTTGGTTGACGAAGATTTAAG ACCGTATCGTGTGTGAGAGACCAGTGGGACGTGCGCTGTGCATGCCGGGT GCGCGAACCGGCTCTTTCTTTGCTCTTTGCTCTTTGCTCTTTGCTCTTTG CTCTTTGCTCTTTGCTCTTTGCACTTTGCTCTTTGCTCTTTGCTCTTTGC TCTTTGCTCTTTGCTCTTTGCTCTTTGCTCTTTGCTCTTTGCTCTTTGCT GTCAAGTACATACCGTTCTGTGTCGTTTCGAGCTAGATAGCTATGGCAGT GCATGTGCCTGAAAGCGTGTTCCACCACGTGGCGTGTATGTTTTCCTCGT CTCCTATTTGTGTTTTGTTGTTGTGGCCCTAGCTGCATTGCCTATCCACC TGTTTGCAATTCCTGTCGGCACTGTTCGCCGCTGTATTGTAGTGGTGGAT GGAACCAGAAAATATGGTAACGTAGCCGGTTGCGCGGCGTTACCGTCAGC ACCCGCGTTTCTCACACGAAAATTGCACGTGTAGTTTTCTGTCAAGATGT GATATGTTGCGTTGTTTTCCTCTTGCTGACGAGATCATCAAGCGAAGCGG TAGTACAGGACTTCCTCGGATGTATGTATGCACCCTGCTGTATGCCAATC CTCTGCCTGGCTCTTGCTCTTTGCCCCGCGGTGTGGGCAGGCAACATGCG GAAGTTACCACACAGCCGCAGTGACAGACAAAGGAGAGCTCTACACCTGG GGAGGCGGCATGTACGGGAAGGTGAGACGGACCTCTGTGAAGCTTTACGA GCGATGCGGGCTTAGTACGCGGGCGGAGGAGGGAGCAGGGGCTAGGGGCG GCACACGGACGCCTTAGGGTGCACATTCGTTTCTGGCTGAAAGCAATCGC AGAATTGTCCATTGTAACACGTTTCGAAACGCCCGCGCTTCCCTTTTTTC TCTCGGCGTTGTTAAACCCTGCCCGACAGCTGGGGCACGGTAACGAGAGC GGGCACCCCACCCCCTGCATGGTGAAGCACCTTAGGGACGAGGGGGCGAG GGTCACGCAGATCGCTTGCGGCAGCCGCCACACCGTCGTGCTCACGGACC TGGGCAAGGTGAGAAAATCGCAGGAACATAGGCACAGCAGCAGCTTCCGC TGACGATGACTCATGGATTGATTGCTACTCTGTTGTAGACTCTTCTCTGG GAAGGAGGTGGATTTGTTGTGTTCTAAGAGCGAAGGAAATAGAGGCGTCT TTTGTCTTGCGGGACACGTACCGTACCTCGGAAGTAGTTTGTGGCAGTTG TAGCACGAGAGAGACAAGAGTTTGCTGTTTGGTGTATCTGTTGGTGTCGC CCCTCGAACTCCTCCAGACCACCACATCTGTTGTTGCTGGTTGGTACTGT GGCTTCCTTGCTGCTCTTGTGCTTGAACTATAATAGGGTTTGTAGCGCTC TGTTCGACGCTTGGTGGACTATTTAGTCACTCCACCTCGGCCGTGCTCAA CGCTAGTTACAGGCCCAAAGGGATAACCAGCGATTCTGTGGTTCTCGGCT GGTTGAGTGCCCTCAGTTTCTCGAAGGAAGACGGGCCGTTCACTTGCGTT GTCCGCTCCAAGGACCGGGTCTAAGAGTGAAGACGCCTCTCGGTACTTCG TGCACAAGAGAAACCAGACCGCTGTGTCTTCGAACCATAAGAAGGGGTAC TGCGTAGTACGCCTACCGCCCTGCCTATCTTGGCCTGAACTCCCGCCACC ACCGCCGCTTTTCCCGGGCAGGTGTACACGTGGGGGGACAAGGAGAACGG GGTAGTGGGGCACACCAACGCGGACGGCCACCAGTACCTGCCCCGCATGC TGGAGTCCCTGCAGGCCAAGACCGTAACCCAGGTGGCGGCGTGCGGCTTC CACACGGCCGCCCTCACCGACGCGGGGGAGATCTTCACCTGGGGGGAAGG TAAGGCTACCAACGCTGGCTGGTGCTGCTGCTGCTGCTGCTGCTGCTGCT TACGGTAACATAAGTACGGCTGTTCCTGATGGGACCGCGTTGTTGTGCTG TGGGGAAGAAACTAGAAGGACAGGAGAGTATGTACAAAGCGGGGGATTTG TTTTTGCTGCTGTGGCTTTTTGAAAGTGGTTCTGTGGGCTGACTGGGGGC AGACAGCATCCGAAGGGGTGCCAGATGGTAAGGAAGGCAAGGTCAACTGG CCGGCCGCACGGAAGTGGCAAAAGAAAGGCGGTGGTCGGACTTAACAAAG TCTACGTAGCTATGCCTGCCGTGCTGGGAAACGAATCTTACGGTGGTCGT AGAGCTTGTTGGTTCATGGCATGGTGCCCCCTGCTTACCCGCTCAAACTC TGTTCGCTCTTTCTGTCGCCCGTGGAGACGTGAGGGTTGAACACGTCCAG CTGTGGGCGAAAGATACGGAGGTCAATGTAGTGGTAAAATAGATATCCCG CTCTCTTGTTGTTGTGTGTTTGCTGTTTTTTGTGGTAGGGGGCATCTTGC TGTGGAGAACCGCAAGCGTTCGAAAGCCACAACCGAAAGCCACAATCGAA AGCCACAACATCACTCCTCCCCCCCCCCCTTGATTGATGTGCGTGTCCCC CTTTTAGGAAAATTCGGACGCTTGGGTCATGGAATGGAACGAAATCAGAT GGTGCCCAGAATGGTGGAGGTGAGCGAAAGGCGCCGCGCATCTGTGCTTT TCCTGATTTTCTCAACGCGGCCGATGGACTTGGGGGGAAGGGCCGAGGGA GGAAAAGGGACGTTATCCACTGTTGATGGCCAGTGTCCGGTGCTTGGGAA GGATGCACACTCACGAGACGATTCTCTCTAGATTTACACGGCCGTGTAGG TTCGAAGCGGTTGTCCTTTGTCTTGTTTTGCGACGTCGGGTTCCCGGACC GTTACGTCCGGCCGTGTTTCTTCCAAAACGTTGTCTTTTGTCTTGTGTTG TGACGTGGAGTTCCCCCACGGTGATGTGCGCTTTTTCTTGCCGCGGGTTT CCCGGCGTGTTTGCAGGCGTTAATGGGGAAGCGAGTGGGACACGTGGCGT GCGGAGGCTTTCACTCGGCGGCGATTTTGGAGTCGGGGGAGCTCTACACT TGGGGCGGCGGCGAGCATGGGCAGGTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12383:36..3512+

>mRNA_E-fasciculatus_F_contig12383.1836.1 ID=mRNA_E-fasciculatus_F_contig12383.1836.1|Name=mRNA_E-fasciculatus_F_contig12383.1836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1386bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12383:36..3512+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCTTGTTCTCAGAGGATGGCGCTGTGTACACGTGGGGGCGGGGGGACGA
CGGTCGTCTCGGTCACGGAGACAACGGCTGGAAGTACGTGCCAAGGATCG
TGGAGGCGCTGGAAGGGCAGCGAATCGTGCAGGTCTTGTTCTCAGAGGAT
GGCGCTGTGTACACGTGGGGGCGGGGGGACGACGGTCGTCTCGGTCACGG
AGACAACGGCTGGAAGTACGTGCCAAGGATCGTGGAGGCGCTGGAAGGGC
AGCGAATCGTGCAGGCAACATGCGGAAGTTACCACACAGCCGCAGTGACA
GACAAAGGAGAGCTCTACACCTGGGGAGGCGGCATGTACGGGAAGGCAAC
ATGCGGAAGTTACCACACAGCCGCAGTGACAGACAAAGGAGAGCTCTACA
CCTGGGGAGGCGGCATGTACGGGAAGCTGGGGCACGGTAACGAGAGCGGG
CACCCCACCCCCTGCATGGTGAAGCACCTTAGGGACGAGGGGGCGAGGGT
CACGCAGATCGCTTGCGGCAGCCGCCACACCGTCGTGCTCACGGACCTGG
GCAAGCTGGGGCACGGTAACGAGAGCGGGCACCCCACCCCCTGCATGGTG
AAGCACCTTAGGGACGAGGGGGCGAGGGTCACGCAGATCGCTTGCGGCAG
CCGCCACACCGTCGTGCTCACGGACCTGGGCAAGGTGTACACGTGGGGGG
ACAAGGAGAACGGGGTAGTGGGGCACACCAACGCGGACGGCCACCAGTAC
CTGCCCCGCATGCTGGAGTCCCTGCAGGCCAAGACCGTAACCCAGGTGGC
GGCGTGCGGCTTCCACACGGCCGCCCTCACCGACGCGGGGGAGATCTTCA
CCTGGGGGGAAGGTGTACACGTGGGGGGACAAGGAGAACGGGGTAGTGGG
GCACACCAACGCGGACGGCCACCAGTACCTGCCCCGCATGCTGGAGTCCC
TGCAGGCCAAGACCGTAACCCAGGTGGCGGCGTGCGGCTTCCACACGGCC
GCCCTCACCGACGCGGGGGAGATCTTCACCTGGGGGGAAGGAAAATTCGG
ACGCTTGGGTCATGGAATGGAACGAAATCAGATGGTGCCCAGAATGGTGG
AGGAAAATTCGGACGCTTGGGTCATGGAATGGAACGAAATCAGATGGTGC
CCAGAATGGTGGAGGCGTTAATGGGGAAGCGAGTGGGACACGTGGCGTGC
GGAGGCTTTCACTCGGCGGCGATTTTGGAGTCGGGGGAGCTCTACACTTG
GGGCGGCGGCGAGCATGGGCAGGTGGCGTTAATGGGGAAGCGAGTGGGAC
ACGTGGCGTGCGGAGGCTTTCACTCGGCGGCGATTTTGGAGTCGGGGGAG
CTCTACACTTGGGGCGGCGGCGAGCATGGGCAGGTG
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