mRNA_E-fasciculatus_F_contig12328.1795.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: D8LCX2_ECTSI (Protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX2_ECTSI) HSP 1 Score: 264 bits (674), Expect = 7.780e-84 Identity = 129/135 (95.56%), Postives = 131/135 (97.04%), Query Frame = 1
Query: 1 SHRLMHWAREYIVSMSPGSGIGGEGVTSPPPPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVPE 405
SHRLMHWAREYIVSMSPGSGIGGEGV SPPPPKPHEVLMAAWEYTIGEK VVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDS+VAGYMRE+KTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVPE
Sbjct: 261 SHRLMHWAREYIVSMSPGSGIGGEGVMSPPPPKPHEVLMAAWEYTIGEK---VVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSNVAGYMREKKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVPE 392
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: A0A6H5J6V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6V2_9PHAE) HSP 1 Score: 270 bits (689), Expect = 9.210e-84 Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 1
Query: 1 SHRLMHWAREYIVSMSPGSGIGGEGVTSPPPPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVPE 405
SHRLMHWAREYIVSMSPGSGIGGEGV SPPPPKPHEVLMAAWEYTIGEKAS VVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRE+KTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVPE
Sbjct: 504 SHRLMHWAREYIVSMSPGSGIGGEGVMSPPPPKPHEVLMAAWEYTIGEKAS-VVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMREKKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVPE 637
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: A0A836CA81_9STRA (Protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA81_9STRA) HSP 1 Score: 188 bits (478), Expect = 8.340e-57 Identity = 98/133 (73.68%), Postives = 109/133 (81.95%), Query Frame = 1
Query: 7 RLMHWAREYIVSMSPGSGIGGEGVTSP-PPPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVP 402
RLM WA++YI+S +P S G V P P PKP EVL AAWE +GEKA VGSSTAC+A LDY L+QL+FSNIGD GVVVLRHIDSD+AGYMRER+TPRHLR SDLR+AFISQQQLRSFNLPYQ GYTNVP
Sbjct: 50 RLMFWAQQYILSTAP-SVSGSAVVDQPRPAPKPLEVLSAAWEMVMGEKA---VGSSTACIATLDYSLDQLTFSNIGDNGVVVLRHIDSDIAGYMRERRTPRHLRTSDLRIAFISQQQLRSFNLPYQLGYTNVP 178
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: W7THC9_9STRA (Protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THC9_9STRA) HSP 1 Score: 148 bits (373), Expect = 5.630e-39 Identity = 77/133 (57.89%), Postives = 97/133 (72.93%), Query Frame = 1
Query: 1 SHRLMHWAREYIVSMSPGSGIGGEGVTSPPPPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNV 399
SHRLM ++I SM+P + VT P +P +VL +AWE EK VVGSSTAC+A LD +L QLSF N+GD G++++RHIDSDVAGYMR++ TPR LR +D R+AF+S+QQLRSFNLPYQ GYTN
Sbjct: 402 SHRLMQLCEQFIRSMAPKAP---NLVT--PMVRPLDVLSSAWETITKEK---VVGSSTACIATLDMELNQLSFCNVGDSGIIIMRHIDSDVAGYMRDKTTPRPLRTNDFRIAFVSRQQLRSFNLPYQMGYTNT 526
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: A0A7S1TY81_9STRA (Protein phosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TY81_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.410e-36 Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 1 SHRLMHWAREYI---VSMSPGSGIGGEGVTSPPPPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGY 390
SH LM A+E + S S G ++ P +P +VL AAW+ T+ + + GS+TA VA LD +L QLSFSN+GD G+VVLRHIDS VAGYMRER TPRHLR SDLR+AF SQQQL++FNLPYQ GY
Sbjct: 371 SHNLMQAAKESVENFASSVQASVKRGTALSEQHPIRPLDVLKAAWKETLEHR---IPGSATALVATLDTELNQLSFSNVGDAGIVVLRHIDSTVAGYMRERTTPRHLRQSDLRVAFQSQQQLKAFNLPYQLGY 500
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: A0A7R9YFZ0_9STRA (Protein phosphatase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFZ0_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.410e-35 Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query: 91 PPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGY 390
P +P E+L A W T+ ++ V GS+TA +A +D +L QLSFSN+GD G+V+LRHIDS VAGYMR+ TPRH+R DLRLAF SQQQL+SFNLPYQFGY
Sbjct: 15 PIRPMEILQAGWASTMEKR---VPGSATALIATVDTELSQLSFSNVGDAGIVILRHIDSTVAGYMRDHTTPRHMRKGDLRLAFQSQQQLKSFNLPYQFGY 111
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: A0A482RSQ1_9ARCH (CBS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSQ1_9ARCH) HSP 1 Score: 138 bits (347), Expect = 1.900e-35 Identity = 64/107 (59.81%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 91 PPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVPEAS 411
P P +V+M AW T + + G+ST CVA LD L QLS+SN+GDCG++V+RHIDS+ AGYMRER+ PRHLR +DLR+A++SQQQLR+FNLPYQ G++N+PE S
Sbjct: 386 PIHPLDVIMDAWNLTTSAEIN---GASTICVATLDKKLSQLSYSNLGDCGLMVVRHIDSETAGYMRERQMPRHLRKNDLRIAYLSQQQLRAFNLPYQLGFSNIPEVS 489
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: A0A7R9YFN6_9STRA (Protein phosphatase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFN6_9STRA) HSP 1 Score: 130 bits (327), Expect = 6.180e-35 Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query: 91 PPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGY 390
P +P E+L A W T+ ++ V GS+TA +A +D +L QLSFSN+GD G+V+LRHIDS VAGYMR+ TPRH+R DLRLAF SQQQL+SFNLPYQFGY
Sbjct: 15 PIRPMEILQAGWASTMEKR---VPGSATALIATVDTELSQLSFSNVGDAGIVILRHIDSTVAGYMRDHTTPRHMRKGDLRLAFQSQQQLKSFNLPYQFGY 111
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: A0A7S2WRH3_9STRA (Protein phosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRH3_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.780e-34 Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 1 SHRLMHWAREYIVSMSPGSGIGGEGVTSPPPPKPHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYM-RERKTPRHLRDSDLRLAFISQQQLRSFNLPYQFGY 390
S RLMH +Y+ S +P + +P P P EVL AWE EK +VGS TAC+ LD+ + QLS++N+GD G+++LRHIDS+VAG + R R TPR R SDLR+AF+SQQQLRSFNLPYQ GY
Sbjct: 379 SQRLMHCCAKYLNSSAPEESLSNTDEYTPHP-SPLEVLQRAWEMVTREK---IVGSCTACIVTLDHQMSQLSYANLGDSGLIILRHIDSEVAGTVYRNRTTPRSDRTSDLRIAFLSQQQLRSFNLPYQLGY 505
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Match: A0A7S3MB05_9STRA (Protein phosphatase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB05_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.510e-27 Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 1
Query: 100 PHEVLMAAWEYTIGEKASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRERK----TPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNV 399
P +V+M AW T E VVGSST CVA LD L QLS+SNIGDCG++V+RHID+ GY+ ++ + H SDL +AF+SQQQL+SFNLPYQ G+TN+
Sbjct: 64 PLDVIMDAWNMTNSEG---VVGSSTICVATLDRKLGQLSYSNIGDCGLLVIRHIDNAQVGYLAKKSFQSNSSAHTAHSDLHIAFLSQQQLKSFNLPYQLGFTNI 164 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12328.1795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12328.1795.1 >prot_E-fasciculatus_F_contig12328.1795.1 ID=prot_E-fasciculatus_F_contig12328.1795.1|Name=mRNA_E-fasciculatus_F_contig12328.1795.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=134bp MHWAREYIVSMSPGSGIGGEGVTSPPPPKPHEVLMAAWEYTIGEKASLVVback to top mRNA from alignment at E-fasciculatus_F_contig12328:541..1660+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12328.1795.1 ID=mRNA_E-fasciculatus_F_contig12328.1795.1|Name=mRNA_E-fasciculatus_F_contig12328.1795.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1120bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12328:541..1660+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12328:541..1660+ >mRNA_E-fasciculatus_F_contig12328.1795.1 ID=mRNA_E-fasciculatus_F_contig12328.1795.1|Name=mRNA_E-fasciculatus_F_contig12328.1795.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=804bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12328:541..1660+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |