mRNA_E-fasciculatus_F_contig1232.1790.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1232.1790.1
Unique NamemRNA_E-fasciculatus_F_contig1232.1790.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: D7FMI7_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI7_ECTSI)

HSP 1 Score: 719 bits (1857), Expect = 1.570e-259
Identity = 370/404 (91.58%), Postives = 382/404 (94.55%), Query Frame = 1
Query:   70 MGRFEDQTTTASAALAGMPLPTSKN-----GCTRVNVADFERCAKIVLPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARIGPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSYRAKL 1266
            MGR E Q+ TASAA  GMPLPT K+     GCT VNVAD+ER AK+VLPKGEFDYFAGGANDM+TLRENRAAY RLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGG NM+RWFQLSLSSRKNR VLAGLVRRA AAGYTALVVTVDRPVLGRREADLRNCYELAPR AEGRVVSATGARIG RPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSV+T EAAEEA+AHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCE+FVDGGIRRGTDVLKALALGA+AVFIGRPVIWGLAHSG+HGVTDVINLLNEELVQAMRLMGCK+L DIERSMVAHQSSY AKL
Sbjct:    1 MGRLEGQSATASAASTGMPLPTPKSDTARPGCTHVNVADYERRAKVVLPKGEFDYFAGGANDMVTLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGPNMQRWFQLSLSSRKNRTVLAGLVRRAIAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVMTREAAEEALAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEIFVDGGIRRGTDVLKALALGASAVFIGRPVIWGLAHSGEHGVTDVINLLNEELVQAMRLMGCKKLGDIERSMVAHQSSYHAKL 404          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: D8LDI6_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI6_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 4.440e-147
Identity = 227/374 (60.70%), Postives = 280/374 (74.87%), Query Frame = 1
Query:  145 GCTRVNVADFERCAKIVLPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARIGPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSYRAKL 1266
            G   VNV +FER A+++L K  FDY+A GANDM+TLRENRAA++RLRLRPR+LRDVS VDT+ +VLG++++ PI I+PTA  R AHD GE ATA AAA   ++M +SS +TT+LEDVA AGG    RWFQL +   K+R +   LV+RA AAGYTAL VTVD PVLGRREAD+RN ++L      G  VSA GA      DG  D G A+       ++L+W+D+ WLRTICG MKIVVK V+T E A E+V  GVD +WVSNHG RQLDT PATIE+LPEVV AV GRCE+++DGGI RGTDV KALALGA AVFIGRPV+WGLAHSG+ GV+ V+ LL++ELV A++L GC R++   RSMV HQ+SY +KL
Sbjct:   23 GWEPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSMVDTSTSVLGQKISSPICIAPTAMQRMAHDSGECATAGAAAKAGALMTLSSWSTTSLEDVAKAGGPGGARWFQLYVY--KDRKITEQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHASGTKDGGNDSGLAAYVASLIDRTLDWNDIKWLRTICGSMKIVVKGVMTAEDAAESVRQGVDGIWVSNHGARQLDTTPATIEVLPEVVAAVSGRCEIYLDGGICRGTDVFKALALGAKAVFIGRPVLWGLAHSGEEGVSKVLKLLHDELVMALQLTGCTRVSSASRSMVTHQTSYYSKL 394          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: W7UBQ6_9STRA (Peroxisomal glycolate oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBQ6_9STRA)

HSP 1 Score: 387 bits (995), Expect = 7.880e-129
Identity = 208/370 (56.22%), Postives = 263/370 (71.08%), Query Frame = 1
Query:  157 VNVADFERCAKIVLPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARIGPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSYRAKL 1266
            VN+ +FE  AK  LPK  FDY+A GANDMITLRENRAA+ RLR+RPR+LRDVS VDT  TVLG+ +A PI ++PTA  R A  +GELATARA A   ++M +SS +TT++EDVA A  +   +WFQL +   K+R + A L RRA  AGY AL +TVD PVLGRREAD+RN ++L           A G+      DG  D G A+       ++L W DV WLR+IC ++ IVVK V+T E A  A+  GVDA+WVSNHG RQLDTV +TIE+LP++V+AV GRCEV++DGG+ RGTD  KALALGA AVFIGRPV+WGLAHSG+ GV  V+ LL +E   AM+L GC +L+DI+RSMV H  SY++K+
Sbjct:   26 VNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPIP--KWFQLYVY--KDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSIC-NLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMVTHVVSYQSKI 390          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: A0A836CMB2_9STRA (Glycolate oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB2_9STRA)

HSP 1 Score: 387 bits (993), Expect = 2.000e-128
Identity = 208/379 (54.88%), Postives = 270/379 (71.24%), Query Frame = 1
Query:  124 PLPTSKNGCTRVNVADFERCAKIVLPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATA--GGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARIGPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSY 1254
            P+     G   V+V ++E+ A+++LPK  FDY+A GANDMITLRENRAA+SRLR+RPR++RDVSS     TVLG  +  PI I+P+A  R AHDDGE AT+ AA  + ++M +SS +TT LE+VA A  GG    RWFQL +   K+R + A LV+RA A+GYTAL VTVD PVLGRREAD+RN ++L      G  + A GA      DG  D G ++       ++L+WDD+ WLR+I   + IVVK V+T E A EA+ +GVDA+WVSNHG RQLDTV +TIE LPEVV AV G+ EV++DGG+ RGTDV KALA+GA AVFIGRPV+WGLAHSG+ GV  V+ L+NEEL  A++L GC  + +I++SMV HQ++Y
Sbjct:   19 PMAPQMAGWEPVSVREYEKAAEMMLPKNAFDYYASGANDMITLRENRAAFSRLRIRPRIMRDVSSTSNKTTVLGIPVNSPICIAPSAMQRMAHDDGEKATSAAAGKSNTLMTLSSWSTTPLEEVAAAYPGG---PRWFQLYVY--KDRKLTAELVKRAEASGYTALAVTVDTPVLGRREADVRNRFKLPVHLTMGNFIGAGGAHAEGTKDGGKDSGLSAYVASLIDRTLSWDDIRWLRSIT-KLAIVVKGVMTAEDAREALRYGVDAIWVSNHGARQLDTVSSTIEALPEVVAAVAGKVEVYLDGGVTRGTDVFKALAMGARAVFIGRPVLWGLAHSGEDGVAAVLRLMNEELTMALQLAGCTSVDEIQKSMVVHQTAY 391          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: A0A6V1QYU9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QYU9_HETAK)

HSP 1 Score: 377 bits (968), Expect = 1.050e-124
Identity = 206/380 (54.21%), Postives = 261/380 (68.68%), Query Frame = 1
Query:  136 SKNGCTRVNVADFERCAKIVLPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGL---NMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARIGPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSYRAKL 1266
            +K+G   VNV ++E  A   +PK  FDY+A GANDMITLRENRAAY RLR+RPR+LRDVS VD + T+LG++++ PI ++P+A  R AH+DGE ATARA A + ++M +SS +T ALE+VA AG     +  RWFQL +   K+R V+  LVRRA AAGY A  VTVD PVLGRREAD+RN ++L      G   S  GA      DG  D G A+       ++LNW+D+ WL+     MK+VVK V+T E A  A    VD +WVSNHG RQLDT  ATIE++PE+V AV  RCE++VDGG+ RGTD  KALALG TAVFIGRPV+WGLAHSG+ GV  V+ LL  E   AM+L GC R+ +I+R+MV H S + AKL
Sbjct:   18 AKSGWEPVNVREYEAHAAEYMPKNAFDYYASGANDMITLRENRAAYQRLRMRPRILRDVSKVDISTTILGDKISSPICVAPSAMQRMAHEDGENATARACAKSGTLMTLSSWSTIALEEVAQAGAAAEPSAPRWFQLYVY--KDRDVVLDLVRRAEAAGYKAFAVTVDTPVLGRREADVRNRFKLPTHLTMGNFASKGGAHASGTKDGGKDSGLAAYVAGLIDRTLNWEDIAWLKRNTF-MKVVVKGVMTAEDARMACEANVDGIWVSNHGARQLDTCLATIEMVPEIVAAVNKRCEIYVDGGVLRGTDAFKALALGCTAVFIGRPVLWGLAHSGEEGVAHVLQLLRAEFEMAMQLNGCTRVGEIQRAMVCHASEF-AKL 393          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: A0A7S2V919_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V919_9STRA)

HSP 1 Score: 361 bits (927), Expect = 2.480e-119
Identity = 199/344 (57.85%), Postives = 247/344 (71.80%), Query Frame = 1
Query:  241 MITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATA--GGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARIGPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSYRAKL 1266
            MITLRENRA Y+RLRLRPR++RDVS  D++ TVLG++++ PI ++P+A  R AHDDGE AT++A A T ++M +SS +TTALE+V+ A  GGL   RWFQL +   K+R V   LVRRA AAGY AL VTVD PVLGRREAD+RN ++L P    G  V   G+      DG  D G A+       ++LNW+D+ WLR++   +KIVVK V T E A+ AV + VD +WVSNHG RQLDTV ATIE+LPEVV+AV G CEV+VDGGI RGTDV KALALGA AVFIGRPV+WGLAHSG+ GVT+ + LL  E   AM+L GC ++ DI R+ V H S Y AKL
Sbjct:    1 MITLRENRAGYTRLRLRPRIMRDVSQTDSSTTVLGDKVSSPICVAPSAMQRMAHDDGECATSKACAKTGTLMTLSSWSTTALEEVSDAAPGGL---RWFQLYVY--KDRVVTLDLVRRAEAAGYKALAVTVDTPVLGRREADVRNRFKLPPHLTMGNFVGKGGSHAEGTKDGGKDSGLAAYVASLIDRTLNWEDIQWLRSVTS-LKIVVKGVQTAEDAKVAVENKVDGIWVSNHGARQLDTVAATIEMLPEVVRAVNGACEVYVDGGILRGTDVFKALALGAKAVFIGRPVLWGLAHSGEEGVTNALTLLQNEFTMAMQLTGCVKVDDINRAHVCHASEY-AKL 337          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: A0A7R9UGG8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG8_9STRA)

HSP 1 Score: 357 bits (917), Expect = 5.210e-117
Identity = 200/375 (53.33%), Postives = 249/375 (66.40%), Query Frame = 1
Query:  145 GCTRVNVADFERCAKIVLPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARI-GPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSYRAKL 1266
            G T VN+ ++E  AK  +P+  +DY+A GA DMITLRENRAA+ RLR RPR+LRDVSS+DT  TVLG++++ PI I+PTA  + AH DGE ATARAA    ++M +SS +T +LE+VA     + R WFQL +   K+R V   LVRRA   GY AL VTVD PVLGRREAD+RN + L      G      GA   G +  G    G AS       ++L W+D+ WLR     +KIVVK V T E A  AV  GVDA+W+SNHG RQLDT PAT E++PE++ AV GRCEV+VDGGI RG D LKA+ALG  AVFIGRPV+WGLAHSG  GV  V++LL  EL  AM L G   + DI+R MV H + Y ++L
Sbjct:   23 GPTPVNLKEYEAFAKNNMPRNAWDYYASGALDMITLRENRAAWGRLRFRPRILRDVSSIDTATTVLGQKVSMPICIAPTAMQQMAHPDGERATARAARKKGALMTLSSWSTLSLEEVAEEAPDSFR-WFQLYVY--KDRDVTLDLVRRAERNGYKALAVTVDTPVLGRREADVRNRFSLPSHLTMGNFAGVGGAHSSGTKSSGAEGSGLASYCASLIDRTLTWEDLRWLRANTS-LKIVVKGVSTAEDASVAVREGVDAIWISNHGARQLDTTPATCEMIPEIIAAVGGRCEVYVDGGITRGADALKAVALGCRAVFIGRPVLWGLAHSGSDGVEHVLDLLKAELEMAMMLCGAVTVKDIKREMVTHNTKYFSRL 393          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: A0A7S4KCV1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCV1_9STRA)

HSP 1 Score: 356 bits (913), Expect = 2.460e-116
Identity = 207/396 (52.27%), Postives = 253/396 (63.89%), Query Frame = 1
Query:   73 GRFEDQTTTASAALAGMPLPTSKNGCTRVNVADFERCAKIVLPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARIGPR--PDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSY 1254
            G  ED   TA+ AL   P P        +NV ++E  A   LPK  FDYF  GANDMITLRENR A+ RLRLRPRVLR+V +VD + TVLG  +  PI ++PTA    AH+DGE ATARA     ++M +SS +TT+LE+   A     + WFQL +   K+R + A LVRRA  AGY AL VTVD P LGRRE D+RN ++L         V  +G          G  D G AS       +SL WDD+HWLRTI   + IVVK ++T E AEEAV   VDA+WVSNHG RQLDTV +TIE+LP + + V GRCE++VDGGI RGTD+ KALALGA AVFIGRPV+W LAHSG+ GV  VI LL +E   A+ L GC  L+DI++ MV H S Y
Sbjct:   14 GGQEDTPDTAAIAL--WPFP--------INVKEYEAHASRTLPKNAFDYFHSGANDMITLRENRDAFDRLRLRPRVLRNVQTVDMSTTVLGTPVPFPICVAPTAMQCMAHEDGEKATARACDHHQTLMTLSSWSTTSLEETMEAAPSGPK-WFQLYVY--KDRGITADLVRRAERAGYRALAVTVDTPCLGRREPDVRNRFKLPSHLTMKNFVEMSGDNDHSNGVKKGGNDSGLASYVASLIDRSLQWDDIHWLRTIT-KLPIVVKGIMTAEDAEEAVKCKVDAIWVSNHGARQLDTVASTIELLPSIAKQVNGRCEIYVDGGIYRGTDIFKALALGARAVFIGRPVLWSLAHSGEEGVKHVIGLLKDEFELALSLSGCTSLSDIQQEMVTHVSQY 395          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: A0A7S2FX59_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FX59_9STRA)

HSP 1 Score: 353 bits (905), Expect = 1.060e-115
Identity = 195/355 (54.93%), Postives = 242/355 (68.17%), Query Frame = 1
Query:  196 LPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATA--GGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARIGPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSY 1254
            L K  FDY+A GANDMITLRENRAA++RLR+RPR+LR+V  V+   T+LG++++ PI +SPTA  + AH DGELATARAA    ++M +SS +T  LE+VA A  GGL   RWFQL +   K+R V   L++RA AAGY AL VTVD PVLGRREAD+RN + L      G   +  G             G A        K+LNWDD+ WLR +   MKIVVK V++ E AE A  +GVD + VSNHG RQLDTVPATIEILPEVV+ V GRCEV++DGG+ RG D  KA+A+GA AV IGR  IWGL HSG+ GV++V+ LL++EL  A+RL GC  LAD+   MV HQS Y
Sbjct:    3 LDKNAFDYYASGANDMITLRENRAAFTRLRMRPRILRNVEHVNMETTILGDKVSMPILLSPTAMQQMAHADGELATARAAQKAGTLMTLSSWSTLPLEEVAAAAPGGL---RWFQLYVY--KDREVTLDLIKRAEAAGYKALAVTVDTPVLGRREADVRNKFSLPAHLTMGNFANTGGDHASGTKASDGGSGLAKYVASLIDKTLNWDDIQWLRKVT-TMKIVVKGVMSAEDAEVACQNGVDGILVSNHGARQLDTVPATIEILPEVVKQVAGRCEVYLDGGVSRGLDAFKAIAMGAKAVLIGRAYIWGLVHSGEEGVSNVLGLLHDELEMALRLCGCNCLADVRPEMVTHQSHY 351          
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Match: A0A7S1UI71_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI71_9STRA)

HSP 1 Score: 345 bits (885), Expect = 3.600e-112
Identity = 192/371 (51.75%), Postives = 244/371 (65.77%), Query Frame = 1
Query:  157 VNVADFERCAKIVLPKGEFDYFAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGLNMRRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRFAEGRVVSATGARI-GPRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPATIEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGLAHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSYRAKL 1266
            VN+ +FE  AK  +P+  +DY+A GA DMITLRENRAA+ RLR RPR+LRDV+ VD + TVLG++++ PI I+PTA  + AH +GE A   AA     +M +SS +T ++E+VA     +  RWFQL +   K+R V   L+RRA  AGY A  VTVD P+LGRREAD+RN + L      G   +  G    G +  G    G AS       +SL W+D+ WLR     +KIVVK V T E A  AV  GVDA+W+SNHG RQLDT PAT E++PEVV AV GRCEV+VDGGI RG D LKA+ALG TAVF+GRPV+WGLAHSGQ GV  V++LL  E   AM L GC  + DI+R MV H + + ++L
Sbjct:   28 VNLKEFEAYAKNNMPRNAWDYYASGALDMITLRENRAAWGRLRFRPRILRDVTHVDASTTVLGKKVSMPICIAPTAMQQMAHPEGERANVLAAKNKGCLMTLSSWSTLSMEEVAEVAP-DHPRWFQLYVY--KDREVTMDLIRRAERAGYLAFAVTVDTPLLGRREADVRNRFSLPSHLTMGNFANKGGDHSSGTKDAGAEGSGLASYCASLIDRSLTWEDLRWLRANTS-LKIVVKGVATAEDAAIAVREGVDAIWISNHGARQLDTTPATCEMIPEVVAAVGGRCEVYVDGGITRGADALKAVALGCTAVFVGRPVLWGLAHSGQAGVEKVLDLLKAEFEMAMMLCGCVTVDDIKREMVTHATKFYSRL 394          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1232.1790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMI7_ECTSI1.570e-25991.58Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D8LDI6_ECTSI4.440e-14760.70Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
W7UBQ6_9STRA7.880e-12956.22Peroxisomal glycolate oxidase n=2 Tax=Monodopsidac... [more]
A0A836CMB2_9STRA2.000e-12854.88Glycolate oxidase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6V1QYU9_HETAK1.050e-12454.21Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2V919_9STRA2.480e-11957.85Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UGG8_9STRA5.210e-11753.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4KCV1_9STRA2.460e-11652.27Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2FX59_9STRA1.060e-11554.93Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1UI71_9STRA3.600e-11251.75Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1232contigE-fasciculatus_F_contig1232:6645..12009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score723.8
Seed ortholog evalue4.5e-206
Seed eggNOG ortholog2880.D7FMI7
Preferred nameGOX
KEGG rclassRC00042
KEGG koko:K11517,ko:K13344
KEGG TC3.A.20.1
KEGG ReactionR00475
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00630,map01100,map01110,map01120,map01130,map01200,map04146
KEGG ModuleM00532
GOsGO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003674,GO:0003824,GO:0003973,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005829,GO:0005840,GO:0005911,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008891,GO:0009058,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009725,GO:0009735,GO:0009853,GO:0009987,GO:0010033,GO:0010109,GO:0010204,GO:0016020,GO:0016032,GO:0016491,GO:0016614,GO:0016899,GO:0016999,GO:0017000,GO:0017144,GO:0019048,GO:0019222,GO:0022626,GO:0023052,GO:0030054,GO:0031323,GO:0031347,GO:0031349,GO:0032991,GO:0035821,GO:0042221,GO:0042579,GO:0042742,GO:0042743,GO:0043094,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044003,GO:0044237,GO:0044249,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0048046,GO:0048518,GO:0048583,GO:0048584,GO:0050665,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0055044,GO:0055114,GO:0065007,GO:0072593,GO:0080134,GO:0098542,GO:1903409,GO:1990904
EggNOG free text desc.very-long-chain-(S)-2-hydroxy-acid oxidase activity
EggNOG OGsCOG1304@1,KOG0538@2759
EC1.1.3.15
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlycolate Oxidase
Ec32 orthologEc-23_000460.1
Exons10
Model size1402
Cds size1200
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1232.1790.1prot_E-fasciculatus_F_contig1232.1790.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1232 6778..11592 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927739.354889-UTR-E-fasciculatus_F_contig1232:6644..67771622927739.354889-UTR-E-fasciculatus_F_contig1232:6644..6777Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1232 6645..6777 -
1695995673.9671595-UTR-E-fasciculatus_F_contig1232:6644..67771695995673.9671595-UTR-E-fasciculatus_F_contig1232:6644..6777Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1232 6645..6777 -
1622927739.4954586-UTR-E-fasciculatus_F_contig1232:11592..116241622927739.4954586-UTR-E-fasciculatus_F_contig1232:11592..11624Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1232 11593..11624 -
1695995674.0737174-UTR-E-fasciculatus_F_contig1232:11592..116241695995674.0737174-UTR-E-fasciculatus_F_contig1232:11592..11624Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1232 11593..11624 -
1622927739.5121827-UTR-E-fasciculatus_F_contig1232:11972..120091622927739.5121827-UTR-E-fasciculatus_F_contig1232:11972..12009Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1232 11973..12009 -
1695995674.0817454-UTR-E-fasciculatus_F_contig1232:11972..120091695995674.0817454-UTR-E-fasciculatus_F_contig1232:11972..12009Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1232 11973..12009 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927739.3709834-CDS-E-fasciculatus_F_contig1232:6777..69181622927739.3709834-CDS-E-fasciculatus_F_contig1232:6777..6918Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 6778..6918 -
1695995673.986877-CDS-E-fasciculatus_F_contig1232:6777..69181695995673.986877-CDS-E-fasciculatus_F_contig1232:6777..6918Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 6778..6918 -
1622927739.3848503-CDS-E-fasciculatus_F_contig1232:7296..74371622927739.3848503-CDS-E-fasciculatus_F_contig1232:7296..7437Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 7297..7437 -
1695995673.9967325-CDS-E-fasciculatus_F_contig1232:7296..74371695995673.9967325-CDS-E-fasciculatus_F_contig1232:7296..7437Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 7297..7437 -
1622927739.397155-CDS-E-fasciculatus_F_contig1232:8266..84011622927739.397155-CDS-E-fasciculatus_F_contig1232:8266..8401Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 8267..8401 -
1695995674.004917-CDS-E-fasciculatus_F_contig1232:8266..84011695995674.004917-CDS-E-fasciculatus_F_contig1232:8266..8401Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 8267..8401 -
1622927739.410483-CDS-E-fasciculatus_F_contig1232:8609..86991622927739.410483-CDS-E-fasciculatus_F_contig1232:8609..8699Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 8610..8699 -
1695995674.0142071-CDS-E-fasciculatus_F_contig1232:8609..86991695995674.0142071-CDS-E-fasciculatus_F_contig1232:8609..8699Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 8610..8699 -
1622927739.4246576-CDS-E-fasciculatus_F_contig1232:9046..92531622927739.4246576-CDS-E-fasciculatus_F_contig1232:9046..9253Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 9047..9253 -
1695995674.0232878-CDS-E-fasciculatus_F_contig1232:9046..92531695995674.0232878-CDS-E-fasciculatus_F_contig1232:9046..9253Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 9047..9253 -
1622927739.4386115-CDS-E-fasciculatus_F_contig1232:9612..97851622927739.4386115-CDS-E-fasciculatus_F_contig1232:9612..9785Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 9613..9785 -
1695995674.0332773-CDS-E-fasciculatus_F_contig1232:9612..97851695995674.0332773-CDS-E-fasciculatus_F_contig1232:9612..9785Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 9613..9785 -
1622927739.4585223-CDS-E-fasciculatus_F_contig1232:10256..103751622927739.4585223-CDS-E-fasciculatus_F_contig1232:10256..10375Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 10257..10375 -
1695995674.0474393-CDS-E-fasciculatus_F_contig1232:10256..103751695995674.0474393-CDS-E-fasciculatus_F_contig1232:10256..10375Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 10257..10375 -
1622927739.4743128-CDS-E-fasciculatus_F_contig1232:10966..110841622927739.4743128-CDS-E-fasciculatus_F_contig1232:10966..11084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 10967..11084 -
1695995674.0577092-CDS-E-fasciculatus_F_contig1232:10966..110841695995674.0577092-CDS-E-fasciculatus_F_contig1232:10966..11084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 10967..11084 -
1622927739.485663-CDS-E-fasciculatus_F_contig1232:11516..115921622927739.485663-CDS-E-fasciculatus_F_contig1232:11516..11592Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 11517..11592 -
1695995674.0657635-CDS-E-fasciculatus_F_contig1232:11516..115921695995674.0657635-CDS-E-fasciculatus_F_contig1232:11516..11592Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1232 11517..11592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1232.1790.1

>prot_E-fasciculatus_F_contig1232.1790.1 ID=prot_E-fasciculatus_F_contig1232.1790.1|Name=mRNA_E-fasciculatus_F_contig1232.1790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=400bp
MGRFEDQTTTASAALAGMPLPTSKNGCTRVNVADFERCAKIVLPKGEFDY
FAGGANDMITLRENRAAYSRLRLRPRVLRDVSSVDTTRTVLGERMAHPIG
ISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGLNM
RRWFQLSLSSRKNRAVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRN
CYELAPRFAEGRVVSATGARIGPRPDGTMDLGQASDARPEAGKSLNWDDV
HWLRTICGDMKIVVKSVITGEAAEEAVAHGVDAVWVSNHGGRQLDTVPAT
IEILPEVVQAVRGRCEVFVDGGIRRGTDVLKALALGATAVFIGRPVIWGL
AHSGQHGVTDVINLLNEELVQAMRLMGCKRLADIERSMVAHQSSYRAKL*
back to top

mRNA from alignment at E-fasciculatus_F_contig1232:6645..12009-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1232.1790.1 ID=mRNA_E-fasciculatus_F_contig1232.1790.1|Name=mRNA_E-fasciculatus_F_contig1232.1790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5365bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1232:6645..12009- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTGCGACTCTCCTGAGTGCCCCCTGTGCCCTTCCCAGGTACCGTTTGCTT GTCCTCCGCTGGGCGTAACAGCAGTGTAAACATGAACCGCGGGGTACGAC CCAATACCTTACGACCTCCCAGCTAGCTGCGCTGTGAAAGACACGCTGCT TTCAGGCAGCAAGCAAAACCCGCAAATTACAATAGCTTGCTGATCTTCAG GACTGAAGAGATAGTGTACCAAGAATTCACCACGTGCCATTGTAAGTATT TGAATCCGCGCACAACCTCGTCGCCATTGCTAGTATATGAAACCGCACAC AACGTTCCGTTGCCATTTTGTAAGTATTTGAAACCCGCATGCTTCCTTCC TCCCGATGTTGTTGGTGGATGACGTCATCGCGGAGGCATCTTTACAGCAG CAGCTTTGTGCGGAGGGATGGGGAGGTTTGAAGATCAAACCACTACTGCT TCTGCTGCCCTTGCTGGCATGCCTCTACCAACGTCGAAGAATGGTGAGGC TTTGCGGATTGTTATTTGATTCCGAAAACGGTACCGAAAACAATAGTACG TATTGGTACAGTTAGACGACCTTTCGTTCTGTGTCGGCGAACGAAAGAGC GAACGAAAGAGCGAACGAAAGAGCGAACGAAATGATATGAGGAGGACGCA TGTGCGGAAACCTGTCTACTACACATTCTCATTAGAATACCAAAAATGTT GTTCTCTGGGTCATTTTGTAAACCTGACCCTGAACACAATCATCTGGTTG AGGAAGACATCTTTCACGTATTTGCATGGCAGTTGGGTGTGCATGGTGTG GTGCCACAGTTGGGTGTACATAGTGTGGTACCCCAGAGGGTGTGAGGTTT GCCCCAACTCTCGTGGTGTCCTATACATACTATACGCTGCTGCACGGTTC TCCCGCGAATATACTGCACCACCAGGATGCACACGTGTTAACGTTGCGGA CTTCGAACGATGTGCAAAGATTGTACTGCCGAAAGGAGAGTTTGACTACT TCGCAGGCGGTGCGAACGACATGATCACTCTCAGGGAGAACAGGTGAGCA CGCACTGCAATGCATCCTCACATCCTCACACGATGAACGGTACAGTCAAT TGTTCGCGCTAGACACCAGGTGGCACGTAGCATACAGCTTTTATGGTAGT CTAGCGCGCGGCACACAGAACAGAGCCGCCCCAACAATAGAATCGACACA AAAACGGTATTTATTGCGGACAGCCTCTCCAAAATAACTAACAAAGAGGT GCGCGATTGTTTGATACATTTAGGTACACAAGGACCCAACTCTTATGCAT ACTTCTTAAGAAAGTATCCTGGAGCGAGGGACTGGAGCAAAATATGGCTT GCAACACTCCGTCATCCTATTGACTATTTTGCGCGAGGAACCTCTTGGAA TACTGCTAGAAAAATGGTTGCCGGTCGGTGTTGTTGTGAGATTGAAGACA AGGACAACCATTGAGAGAGAGGAGTCTTGGGGTCCGAGACAACCCGTAAG TAAGTAGATACGGAACACGAAAGGGAGGTAGTGTCGTATGGATATGGGGG TCTAATTCCCACCCATCCATATCGTTTCACACCGAGAACGATAGACGAAT GGCCTCGATGTTGTTCTGTTTCGTGTCGCTTCAGGGCTGCGTACAGTCGT CTACGGCTACGGCCTCGCGTGCTGAGAGACGTGTCTTCTGTCGACACCAC ACGCACGGTGCTTGGGGAACGCATGGCGCATCCCATCGGAATCTCGCCCA CAGGTGATTGATAGGAGGTAATAGTTTTGGTCTTGCTTTTTCCGTACCAT GTTCCGTTGAGTTGTTTAAGAATAGTAAAGCGTGCAGTCGCCGCTAGTCA AAGCTGAACACAGTGTCACTACGTTCCTACAGCAGCTAGGTGCGACTGAT AACCACAATCCGGTGGTAGTGTCAGAGAAATGGCGCCGCGTGGAGGTGTA TGAGCGAAATTGGGAGCTTCGCTTTGCCACCGAAGCCAATCACAAGGTGA CTTCTTTGCCTCAGCCCTGCCAGAGATTAGCAGCCGTGGTCCTTGTTCGG GGCCCTCCCTCACACAATATGTGTGTGTCAACAATAATATGTGCACCCAA ATGAATACTCGCTACATCGCGGTTCTGTTTTGATGCTGGTTAAGGACAAC AACCGTTTTCGCCACAACACGACTGTCGGTTCTTCGTACTTCGCGTTCTG CTGTCTCATCACCATTGCTGCAAGCTGAACACCGTGCTGCCCATGACGAC GGCGAGTTGGCCACGGCGAGAGCTGCTGCCGGGACTTGTTCGATGATGGT GGTGAGCTCGTCGGCAACGACCGCCCTGGAGGATGTGGCCACCGCCGGTG GTCTCAACATGCGGCGCTGGTTTCAGCTTTCGTTATCATCGCGCAAGGTA CTAGATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTCTTCACGTCAAAAACCGTTCTGATCCTC TCTACCCGGTACTGTACCTTCATCTGTCCGTATTGATCAAACACTTGACC GGTCGGTAACACTTGATATGGCATACAGTACACCATCGTATTGCAGTGTT TCGAGCTCTGGCTTCCTGTACCGTGATGACCAAATGTCCCTATTCGCAAT ATGCCTACTCGACTTGGGCGTTCACTTCCTACCCGCCCCCTACCCCCTTC ATTCGCTGTCGCCCTTTCAACATTGCACCACGATTTGATGATCTTTGAAA CAAAAGAACAGAGCAGTGCTCGCCGGGCTCGTTAGGCGAGCCAACGCGGC CGGGTACACCGCGCTTGTCGTTACCGTGGATCGCCCCGTGCTAGGTCGGA GGGAGGCAGATCTGCGGAATTGCTACGAGTTGGCCCCTAGGTTTGCGGAG GGCCGAGTGGTATCGGCAACAGGGGCACGCATCGGCCCCCGCCCCGACGG AACCATGGACTTGGTCAGCAAACAGTTTGTCACAGCCAAAGCTGTTGTTC ACACGATTGACCAGAAGCATACATCATGCTGGTCGCTTTGCCTGTCCGTC CCGCACTCTGGGTTGTCTGGCGCTCTCGGACGAAAAGTGTGTGGTTCGAT GTACACACCGTTGTTGTGCACGAATCGTACTCCACTCTTTTTTCAATCCA TTGACCCCAGGAGTTCCGGAGCATCCGAGATAGATGTGTCTCACATCTTT TTTCTTACGCTGGCAGCTGCTTGTATGATGCGGCTGTGTTCCCGTCTTTG TTGTACACTGAACAGCACTGAACAGCACTGAACAGCTGCTATTGTGTGCG ACTCTTGCAGGGTCAGGCGTCTGACGCTCGGCCTGAAGCAGGGAAGAGTC TGAACTGGGACGACGTTCACTGGCTTAGAACTATCTGCGGGGACATGAAG GTATTTTGTTGAATGGTTTCAGTGACCACCTGATTGTCATGTTTTCATCG TTGTTCCCTCTTTTTGCAAACAATTACCATTTGTAGGTTTGCTTTGCACC GTATTTTATGTCTGTACGTTTCGCCGAGAATATGCCCATTTTTACAATCG CCGAGAAACACGCCTAGTGGGCGCGTGCTGCTAAGCAGAGCGTGCGTTCT TCGTACAGATAGTGGTGAAGAGTGTCATTACGGGGGAAGCGGCGGAGGAG GCAGTGGCGCACGGAGTGGACGCGGTGTGGGTCTCTAATCATGGAGGGCG ACAGCTAGACACTGTTCCGGCCACAATTGAGATCCTTCCGGAGGTGCGAG AAAGTGGGGAGTAGAAGGAGAGGGTGTAGACGTTTCGCCCAACGTTGCGG GAGTGCCCTGTGCTGCTTCGGTGGTTCCCGCCGAACGTTTTGACAAAGCG CAATCGGGTACAACTTCGTCCCCAGAGTACTCACAAGAACACAAGAACGC GCTGACTGCCGTAAATGATGGGCCGGAACGAGTATCTCCGCGCCGGGTTA GGCTGCGACCTTTTTTCTAGCCGTCCAGGAACGAACGTGCGTGGAATGAT ACGTGAACCGAGGGTGAAGTAGACGACAGTCCAGATTATTAAGGAATGTC ATTGACTGGGACAAGGGAACCGAGATGGCGTTTTCCATGCGGTTTTGTCG GGCAACGGCATCCAGAAAGTGGCCTTGGGTACAAGAACTGCCTGATGTTC AAGATAACGCCCCCTCCGGATTAACGTCAAAACTAAAGCTGAACTTCTGA GGTCGCATGGCTCTCTGTCTTTAGCTGCAGACGCGACATGGAACGGCCAC GAATTTCTATCGAATGCGTTTTCAACGCGCCGCTCGCGTGGGAAATGTTG CTGTCGTCTTCACGCAAATAATCCTTGACCTCGGATCCAGTACCTGTTGG TCGACATGCACCCTTCTAAAAGGTATTGTCGTCACAAGCTGATCCGCAGC ATGGAAAAAAAAAAAGGAAAGCGGAGAAAAGGTCGTTCACTTCCTCTCAT CCAACACCACCATTGCCTTTGCGCTGGTAGATACCCAACGTTGCGAAGAG ACGTTCACCGATCATCCGTCGCTACATAGCTGTGACATTTTGGTGCGACC TCCGTTGCCTTTCCCTCACCAGGTGGTGCAAGCTGTACGTGGACGCTGCG AAGTCTTTGTGGACGGAGGCATCAGGCGGGGCACGGACGTGCTGAAAGCG CTTGCCCTGGGCGCAACAGCTGTTTTTATCGGCCGACCTGTCATCTGGGG GCTAGCTCACAGCGTGAGTTTTGGCCATGTACCTGTAAGCGGTTGTATAT TTTGAGGTCGCCCGGCAATCATTCCGTGCCAGCAAACGGCAGGTTTTACG CGAGATGATGTAAATTTTCATTCGATCATTCCTGGCTTGTGTCCGGTTTA CACGAATGTGACACCATGTGACACCTCTCAACGAAGAAGGAAGTGTCTTG ACGTTCACCGTAGTGCGGATGTTCACGGATACCGTGGCGTGTCGCGGTGC GTATGCATATTAGCTGGCCTACAAAATGAATTTCCTTAAACAACGCGGCA GGACAAGAACTGGTCACAACATTATTCTCGGTCTCCTGCCTGACCACAAA ATACGCCTGGTGACAATGACGCACTGCATGATGCATGCCAGGGCCAACAT GGAGTGACGGATGTCATCAACCTACTCAACGAAGAGCTCGTCCAAGCGAT GCGGCTCATGGGCTGTAAAAGGCTTGCTGACATCGAGCGAAGCATGGTCG CACACCAAAGCTCCTACCGCGCTAAACTCTAGGTAGCCCAGCAGTCGTGA TGTTGGCGTTGCTTGTACTCTATGAATAGGGTGTGTTTTCTTCGGTTCAA GGGTGGAATCGAGGAATCGAGCTACAGCATCCAAAGCGTATCGATGCATT TCTCGGATCTTGCGC
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1232:6645..12009-

>mRNA_E-fasciculatus_F_contig1232.1790.1 ID=mRNA_E-fasciculatus_F_contig1232.1790.1|Name=mRNA_E-fasciculatus_F_contig1232.1790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2400bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1232:6645..12009- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGGAGGTTTGAAGATCAAACCACTACTGCTTCTGCTGCCCTTGCTGG
CATGCCTCTACCAACGTCGAAGAATGATGGGGAGGTTTGAAGATCAAACC
ACTACTGCTTCTGCTGCCCTTGCTGGCATGCCTCTACCAACGTCGAAGAA
TGGATGCACACGTGTTAACGTTGCGGACTTCGAACGATGTGCAAAGATTG
TACTGCCGAAAGGAGAGTTTGACTACTTCGCAGGCGGTGCGAACGACATG
ATCACTCTCAGGGAGAACAGGATGCACACGTGTTAACGTTGCGGACTTCG
AACGATGTGCAAAGATTGTACTGCCGAAAGGAGAGTTTGACTACTTCGCA
GGCGGTGCGAACGACATGATCACTCTCAGGGAGAACAGGGCTGCGTACAG
TCGTCTACGGCTACGGCCTCGCGTGCTGAGAGACGTGTCTTCTGTCGACA
CCACACGCACGGTGCTTGGGGAACGCATGGCGCATCCCATCGGAATCTCG
CCCACAGGGCTGCGTACAGTCGTCTACGGCTACGGCCTCGCGTGCTGAGA
GACGTGTCTTCTGTCGACACCACACGCACGGTGCTTGGGGAACGCATGGC
GCATCCCATCGGAATCTCGCCCACAGCTGAACACCGTGCTGCCCATGACG
ACGGCGAGTTGGCCACGGCGAGAGCTGCTGCCGGGACTTGTTCGATGATG
GTGGTGAGCTCGTCGGCAACGACCGCCCTGGAGGATGTGGCCACCGCCGG
TGGTCTCAACATGCGGCGCTGGTTTCAGCTTTCGTTATCATCGCGCAAGC
TGAACACCGTGCTGCCCATGACGACGGCGAGTTGGCCACGGCGAGAGCTG
CTGCCGGGACTTGTTCGATGATGGTGGTGAGCTCGTCGGCAACGACCGCC
CTGGAGGATGTGGCCACCGCCGGTGGTCTCAACATGCGGCGCTGGTTTCA
GCTTTCGTTATCATCGCGCAAGAACAGAGCAGTGCTCGCCGGGCTCGTTA
GGCGAGCCAACGCGGCCGGGTACACCGCGCTTGTCGTTACCGTGGATCGC
CCCGTGCTAGGTCGGAGGGAGGCAGATCTGCGGAATTGCTACGAGTTGGC
CCCTAGGTTTGCGGAGGGCCGAGTGGTATCGGCAACAGGGGCACGCATCG
GCCCCCGCCCCGACGGAACCATGGACTTGAACAGAGCAGTGCTCGCCGGG
CTCGTTAGGCGAGCCAACGCGGCCGGGTACACCGCGCTTGTCGTTACCGT
GGATCGCCCCGTGCTAGGTCGGAGGGAGGCAGATCTGCGGAATTGCTACG
AGTTGGCCCCTAGGTTTGCGGAGGGCCGAGTGGTATCGGCAACAGGGGCA
CGCATCGGCCCCCGCCCCGACGGAACCATGGACTTGGGTCAGGCGTCTGA
CGCTCGGCCTGAAGCAGGGAAGAGTCTGAACTGGGACGACGTTCACTGGC
TTAGAACTATCTGCGGGGACATGAAGGGTCAGGCGTCTGACGCTCGGCCT
GAAGCAGGGAAGAGTCTGAACTGGGACGACGTTCACTGGCTTAGAACTAT
CTGCGGGGACATGAAGATAGTGGTGAAGAGTGTCATTACGGGGGAAGCGG
CGGAGGAGGCAGTGGCGCACGGAGTGGACGCGGTGTGGGTCTCTAATCAT
GGAGGGCGACAGCTAGACACTGTTCCGGCCACAATTGAGATCCTTCCGGA
GATAGTGGTGAAGAGTGTCATTACGGGGGAAGCGGCGGAGGAGGCAGTGG
CGCACGGAGTGGACGCGGTGTGGGTCTCTAATCATGGAGGGCGACAGCTA
GACACTGTTCCGGCCACAATTGAGATCCTTCCGGAGGTGGTGCAAGCTGT
ACGTGGACGCTGCGAAGTCTTTGTGGACGGAGGCATCAGGCGGGGCACGG
ACGTGCTGAAAGCGCTTGCCCTGGGCGCAACAGCTGTTTTTATCGGCCGA
CCTGTCATCTGGGGGCTAGCTCACAGCGTGGTGCAAGCTGTACGTGGACG
CTGCGAAGTCTTTGTGGACGGAGGCATCAGGCGGGGCACGGACGTGCTGA
AAGCGCTTGCCCTGGGCGCAACAGCTGTTTTTATCGGCCGACCTGTCATC
TGGGGGCTAGCTCACAGCGGCCAACATGGAGTGACGGATGTCATCAACCT
ACTCAACGAAGAGCTCGTCCAAGCGATGCGGCTCATGGGCTGTAAAAGGC
TTGCTGACATCGAGCGAAGCATGGTCGCACACCAAAGCTCCTACCGCGCT
AAACTCTAGGGCCAACATGGAGTGACGGATGTCATCAACCTACTCAACGA
AGAGCTCGTCCAAGCGATGCGGCTCATGGGCTGTAAAAGGCTTGCTGACA
TCGAGCGAAGCATGGTCGCACACCAAAGCTCCTACCGCGCTAAACTCTAG
back to top