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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-19_002670.2 |
| Exons | 5 |
| Model size | 1071 |
| Cds size | 939 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927734.953366-UTR-E-fasciculatus_F_contig1228:16149..16281 | 1622927734.953366-UTR-E-fasciculatus_F_contig1228:16149..16281 | Ectocarpus fasciculatus Ec846f_Ec191_B4_f female | UTR | E-fasciculatus_F_contig1228 16150..16281 + |
| 1695995671.8993325-UTR-E-fasciculatus_F_contig1228:16149..16281 | 1695995671.8993325-UTR-E-fasciculatus_F_contig1228:16149..16281 | Ectocarpus fasciculatus Ec846f_Ec191_B4_f female | UTR | E-fasciculatus_F_contig1228 16150..16281 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1228.1760.1 >prot_E-fasciculatus_F_contig1228.1760.1 ID=prot_E-fasciculatus_F_contig1228.1760.1|Name=mRNA_E-fasciculatus_F_contig1228.1760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=313bp
MTNAASLIANDARRKEVKSYVEGFAKGKVVDSGSSLLDLADPPLHMILLN
PSLTSSRQLTCQLWRAWCRADQEDIIMAKFRPWDAHGQGQESGSSVIRQA
KDEPDASGNAPNVDGEEGSAKGAPSENVDTGVEEKSAPINRTKVRTQSNL
LDPEDAVEPVLESLRGAMRSAVEKSSLTDIKAPSRQLFDSPTLLLEVCED
RGLENSTLANARFTTAALLFLADNPQSLTWECMACHQTIQNVRFCCETHS
YVMCEKCVNIRQGEIDRMVCPVEGDCGMGVVPRKVPVIDDPPAAAAITDD
SGKRRSTRSTRG* back to topmRNA from alignment at E-fasciculatus_F_contig1228:12517..16281+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1228.1760.1 ID=mRNA_E-fasciculatus_F_contig1228.1760.1|Name=mRNA_E-fasciculatus_F_contig1228.1760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3765bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1228:12517..16281+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACAAACGCGGCCTCCTTGATCGCCAACGATGCAAGACGGAAGGTGAG
TTATGCGGTAACCTGTGTTACGCTGAACAACGAGCAACGATAACACATAG
TTGTACGTGAACAATTGCTTGTTCCCGCGCATCACGAGGAAAAAGAGAGT
GACCTGCGTTGGGATGGAGTCGCTCCAAGAAGAAGCAGAGGAGCAGCCTC
AGCCCTTCCTGCAGGAAGCTGCTGCTTTGTTGATTGGCTTTGTCAGGCGA
GGCAGGCCGCCGGCAGGAACCCTCTCGCCGTGGCGATCGTGTAGGTTATC
TTGGCACCAACAGAGCAGACAAAGGGCGGGGGACATCTTATCTTGTGTAC
AAGAGGCGGCCTCAGTGCAACCAGCGCTACTACCACGTATACCTTCGGGA
GACGCCTGCTTGAAACCAACCAACCGATGAACTGGACAGAGGACGCACAT
GAAGCGAGCTGTTTTTTCATGAACGGATCGGTTATTAATAATGCCAAGAA
TGTCGCAGCCTCTTCAGCGATTGCTACCTGCGCCAGCTAGTGTCATCACA
GCTACGGCAGCCACTACCGCCTTTCCACCCCGATGTGTCATGAACGAGCG
GTTTCAATAGCGGATGCGGGGAGCGTTCGTGTGAAGAATTACACCGAGCG
CAAACTTGCATTGAAGTATTTGATTGCCCCCGAGACTATCCGGAACATTT
TTCGGTGGGTTGGTCGCATCTTATCCCAACTGTTTGCGTATTTTCCTGGT
TATTGCCACCATCTTTCGTATCAAATTGGAACAGGAGGTTAAGAGCTACG
TCGAAGGCTTCGCCAAAGGGAAGGTGGTCGATTCCGGCAGCAGTTTGCTG
GATCTCGCCGATCCGCCATTACATATGATCTTGCTGAACCCGTCACTGAC
ATCATCGCGTCAGCTGACCTGCCAGGTGTGCACTGATTATCGTATGTTTG
CATGGTGGTGGCGCCATTTATGCTTTGCTTCACCCCCCTTGTACAAAATC
GTGCCAGTACTAAGTTTGACTTGCACAACCGCGGTATTGTCCGTCGGTCG
CCGTACCCCCTTCCGTACTACCTTCCTTCCGCCCTCGTTGTGACCGAAAT
TCTGAACGATTTCGTTGTGCGAATATTGACACCTACTCGACAGTCCTCCG
ATCGGTGTACGCGTGCGACTAATTTATCTCGAAGACCAGCACACGTTCGT
CTACATACCAGAGTCACCTTTTGAGCGATTTCTTTTGTTTTGTCAGCCCT
CGCGCTTTGTTGGGATGCTATTCCAAGATCGGTTCCCAAATGTTGGCAAG
AGCAAGAACAGGAGCGGTCAGAACATAGGGATGGTATTCGATGTACAATT
CCGAATATAACGCTCGTCTGCATTCTCGGGGCAGGTCGACGTGCCGCGTC
GAAGAAAGCACCCAGTGCATGCGAGAGTGCTGTTCCCTCACATTACCTCT
CTCGTCGTAAACGTTCCCTTGCGCTCGTTTTCTTGCCGACCTACCATCTG
GGGCACCTCTTGCTTGTCCCAGTTGTGGAGGGCGTGGTGTCGCGCAGACC
AGGAGGATATCATTATGGCGAAGTTCAGGCCATGGGACGCCCATGGGCAA
GGCCAAGAATCCGGAAGCTCCGTCATACGCCAGGCTAAAGACGAACCCGA
CGCAAGCGGCAACGCGCCCAACGTTGACGGAGAAGAAGGCTCGGCGAAGG
GTGCTCCAAGCGAGAACGTGGATACCGGCGTCGAGGAGAAGTCTGCGCCA
ATAAACAGGACGAAAGTCAGGACACAATCAAACCTCCTGGACCCGGAGGA
CGCCGTCGAACCCGTCCTCGAAAGCCTCCGTGGTGCCATGCGCTCAGCCG
TCGAGAAATCCAGTTTGACGGATATCAAGGCACCCTCTCGTCAGCTTTTC
GATAGCCCGACCCTCCTCTTGGAGGTTTGTGAGGTAAGCGATTGGGACAT
GCTCTTGTTCTCGGAGTGACTGCCTCGCAGTAAGCTCTCGACCACATCAG
TCGCGAAATGGGCCCACTGCAGCTACTTTGTGCCTAGTTATACCAAGGCT
TGCCGGAATGGAGAGAGAGGAAAACCTCTAACCGGGTGGAAAGAGGACGT
CAGCCCATTAATAATGTTGCAGGAGGAAGAGAGTAGAACTCGTGCCGTTA
GGCAGAAAAAATGCAAAGGAGAATCGTAAGAGCGCCCGACCGTGAGCGGT
ATTCTCTACCTGGAACACGAGCGGGGTTCTCCGTCTCGAAATGGGGACGA
GTGACCATGGTCAAATGATAAAGGCAACCAAAAGATTATTCCCCCGCCCC
CCGGCAAGCGGTGTATTGCTCTCCAAGTGGAGGTGTTGACGCAGCTTTGA
CTCTTCTTGGGGGCGCTCGTAGTACATTCAAATTCCAACACAATCCCATT
CATGAATCGTTGCTCACAGCCAGTTTCTAACTGTCCTACGGCCTTGCCCT
TCGAACGGAAGAGCGTCGACTCGAGACTATACCAAGTATATTCTGTGGGT
CACACCATCACCTTTGAACGCGCCTACAGCGGTCCTACCCGCAAGTATAC
TCGCGAACGAGCATTTCTTCTACACGACTGCGCCGAAGGAGCAGAATAGA
CACAGGTCGCTGAAGATTGGACTCGCAACAACCCTTACCCACTCCAATAG
ATAGATGGCTTTCAAGAATACAAAAGAGACCACCGGGACGACTGCTTCTA
TAAAACCGTTGCCCTTGAACGTGACGGTTCTACAGAAAGAGGCGTCGAGT
TCATGCAGCAGCAGCAACGTACATGTAGTTAGGTACAGTCTGCAGTGCAA
CCAGATGTGCCGCCAGACTAATCCCATCAACCCATCACCTGTGGAGAAAT
TTCGCTGAAAATGGCCACCCTGCTCCCCCCGCCTTGTCGATATCGCTTGT
CGTCACAAAAATAGGACCGCGGGCTCGAGAACAGCACTCTTGCAAATGCG
CGTTTCACGACTGCCGCGCTGCTGTTCTTGGCAGACAATCCCCAGAGCTT
AACTTGGGAGTGTATGGCTTGTCACCAGACAATTCAGAATGTGCGGTTCT
GCTGTGAAACTCACAGCTATGTCATGTGAGTCGATGTCTCCGGCGTTCTG
GTCTACAGCAGCAATAGTCTGCAACAGAATGTGATAGCGGGAGGTTTGGT
TGCCAATATCCAGTAAATTTTAGTGTACCTTTTCTAGGGTACGTTAGCCC
GTGACCACGGGAATCGACCGCGTCAAGTGTTGGATTAGTACGGACATAGG
AAGGTACTGGGTGGAGAGAGAGATCGGAACGGTTTTTTATGTGAAGACAA
CAACAACAACAACAACAATCCTCGACGAGCAAATTCATCGGCTCTTCTGG
ATTTAGCCTTGTTTTTTTCACACCGAGGAACGAGAAATCACAGTACTAAC
TCCAACTTGTTTTTGTCCACGTGCCTTTCGTCAATAATTTGCGAAACAAC
AGGTGCGAAAAATGCGTCAACATTAGGCAAGGGGAAATAGACCGCATGGT
CTGCCCTGTGGAGGGTGATTGCGGGATGGGAGTGGTCCCCCGCAAAGTGC
CAGTGATTGACGACCCTCCAGCTGCTGCCGCCATCACCGACGACTCCGGG
AAAAGGCGAAGTACACGCTCAACGCGTGGGTGACTGCTTGTTCCCTCGTC
AGCGGGTTGTTTGTGGATCAGCAGTCCCGGGCATAGTTTTAGTCAGAACG
GAGACAGCGGCCAGAAGCGCTTCCACCTGGGTGTTGCGGGGTGCCTATCC
TGTATCTTCCGCGAG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1228:12517..16281+ >mRNA_E-fasciculatus_F_contig1228.1760.1 ID=mRNA_E-fasciculatus_F_contig1228.1760.1|Name=mRNA_E-fasciculatus_F_contig1228.1760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1228:12517..16281+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACAAACGCGGCCTCCTTGATCGCCAACGATGCAAGACGGAAGATGAC
AAACGCGGCCTCCTTGATCGCCAACGATGCAAGACGGAAGGAGGTTAAGA
GCTACGTCGAAGGCTTCGCCAAAGGGAAGGTGGTCGATTCCGGCAGCAGT
TTGCTGGATCTCGCCGATCCGCCATTACATATGATCTTGCTGAACCCGTC
ACTGACATCATCGCGTCAGCTGACCTGCCAGGAGGTTAAGAGCTACGTCG
AAGGCTTCGCCAAAGGGAAGGTGGTCGATTCCGGCAGCAGTTTGCTGGAT
CTCGCCGATCCGCCATTACATATGATCTTGCTGAACCCGTCACTGACATC
ATCGCGTCAGCTGACCTGCCAGTTGTGGAGGGCGTGGTGTCGCGCAGACC
AGGAGGATATCATTATGGCGAAGTTCAGGCCATGGGACGCCCATGGGCAA
GGCCAAGAATCCGGAAGCTCCGTCATACGCCAGGCTAAAGACGAACCCGA
CGCAAGCGGCAACGCGCCCAACGTTGACGGAGAAGAAGGCTCGGCGAAGG
GTGCTCCAAGCGAGAACGTGGATACCGGCGTCGAGGAGAAGTCTGCGCCA
ATAAACAGGACGAAAGTCAGGACACAATCAAACCTCCTGGACCCGGAGGA
CGCCGTCGAACCCGTCCTCGAAAGCCTCCGTGGTGCCATGCGCTCAGCCG
TCGAGAAATCCAGTTTGACGGATATCAAGGCACCCTCTCGTCAGCTTTTC
GATAGCCCGACCCTCCTCTTGGAGGTTTGTGAGTTGTGGAGGGCGTGGTG
TCGCGCAGACCAGGAGGATATCATTATGGCGAAGTTCAGGCCATGGGACG
CCCATGGGCAAGGCCAAGAATCCGGAAGCTCCGTCATACGCCAGGCTAAA
GACGAACCCGACGCAAGCGGCAACGCGCCCAACGTTGACGGAGAAGAAGG
CTCGGCGAAGGGTGCTCCAAGCGAGAACGTGGATACCGGCGTCGAGGAGA
AGTCTGCGCCAATAAACAGGACGAAAGTCAGGACACAATCAAACCTCCTG
GACCCGGAGGACGCCGTCGAACCCGTCCTCGAAAGCCTCCGTGGTGCCAT
GCGCTCAGCCGTCGAGAAATCCAGTTTGACGGATATCAAGGCACCCTCTC
GTCAGCTTTTCGATAGCCCGACCCTCCTCTTGGAGGTTTGTGAGGACCGC
GGGCTCGAGAACAGCACTCTTGCAAATGCGCGTTTCACGACTGCCGCGCT
GCTGTTCTTGGCAGACAATCCCCAGAGCTTAACTTGGGAGTGTATGGCTT
GTCACCAGACAATTCAGAATGTGCGGTTCTGCTGTGAAACTCACAGCTAT
GTCATGACCGCGGGCTCGAGAACAGCACTCTTGCAAATGCGCGTTTCACG
ACTGCCGCGCTGCTGTTCTTGGCAGACAATCCCCAGAGCTTAACTTGGGA
GTGTATGGCTTGTCACCAGACAATTCAGAATGTGCGGTTCTGCTGTGAAA
CTCACAGCTATGTCATGTGCGAAAAATGCGTCAACATTAGGCAAGGGGAA
ATAGACCGCATGGTCTGCCCTGTGGAGGGTGATTGCGGGATGGGAGTGGT
CCCCCGCAAAGTGCCAGTGATTGACGACCCTCCAGCTGCTGCCGCCATCA
CCGACGACTCCGGGAAAAGGCGAAGTACACGCTCAACGCGTGGGTGAGTG
CGAAAAATGCGTCAACATTAGGCAAGGGGAAATAGACCGCATGGTCTGCC
CTGTGGAGGGTGATTGCGGGATGGGAGTGGTCCCCCGCAAAGTGCCAGTG
ATTGACGACCCTCCAGCTGCTGCCGCCATCACCGACGACTCCGGGAAAAG
GCGAAGTACACGCTCAACGCGTGGGTGA back to top
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