mRNA_E-fasciculatus_F_contig1227.1753.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1227.1753.1
Unique NamemRNA_E-fasciculatus_F_contig1227.1753.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 774 bits (1998), Expect = 6.390e-268
Identity = 420/653 (64.32%), Postives = 474/653 (72.59%), Query Frame = 1
Query:  523 SRCLRAKVQCTYIKRKSTHPEYQRKQQLR--GPDGMQPTKLLRHSSSGAL-----LPLKRFRVSASPATGLVGMQESVFLSNFFGCVGFVPLTTPSHIRGEMVKMMASDAAQHQPGAPQDFPEQGQFGAVFTDGGITTGSQLSTSPSACTFWCAVGVGALVKGSPVESVANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSH-PECEQGDSQVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHCEFARGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVTSPLLGDVDGASE-MGDDTIAAADWLDVTHGMLDATD 2454
            SRCLR+ VQCTY KRK   P+ Q + Q R  GP  M  T+LLRHSSSGAL     LPLKRFR+SASPATGLVGMQE+ FLS+FFGCVGF+PLTTPSHIRGEMV+MM    A HQ GA  D PEQ QF A+ T+ GITTGSQLST PSACTFWCAVGVGALV GSPVE V NY  LAR AL+AYTGP NAE+AKA AILGYFYGFMGD   F+EYL LSDSF T SIE+GSTD+LPAGFAE+++HKQTVKVYAG +D   I+  GA+R+  PQ NPA +E DV+ YV QS  A EQ+VF K C   AT   LSDDEP  ++ G  SPHGN PQ EEVS+A+  GL+DGL+DF  LQE  DR NIR GI GL+IN  L  Q A  GDA G LERL +CVEVFERYPGVC C M W H +HS LGALAAI+D RAR LY+RLR++YNPSR   SLPAPPLEEWRG+SAFCD FQCR  EG+IASQA+SVFSTP    SNC GS   +C++   Q   E++HTS I   G   ENATG+ + APCS GDKP +STSSWELNQ   PQ  PP GPSLS SH+HC          +   GAV  CGGG  SG+V  VP MS+  P L  VDG SE  GDDTI  ADWLDVTH ML   D
Sbjct:   39 SRCLRSGVQCTYSKRKPHQPQTQHQHQRRPRGPACMPSTELLRHSSSGALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLSDDEPCEDDGGCGSPHGNPPQAEEVSDAMVTGLRDGLIDFEHLQEAVDRSNIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQALSVFSTPTLCASNCAGSQGAQCKEDYLQAADEQHHTS-IVPAGVILENATGTMMDAPCSNGDKPMSSTSSWELNQKPAPQMSPPVGPSLSTSHVHC---------CEPDRGAVEGCGGGGVSGVVAPVPEMSLRWPELRQVDGVSEETGDDTIVTADWLDVTHAMLGEID 681          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI)

HSP 1 Score: 762 bits (1967), Expect = 3.860e-264
Identity = 406/619 (65.59%), Postives = 461/619 (74.47%), Query Frame = 1
Query:  622 MQPTKLLRHSSSGALL-----PLKRFRVSASPATGLVGMQESVFLSNFFGCVGFVPLTTPSHIRGEMVKMMASDAAQHQPGAPQDFPEQGQFGAVFTDGGITTGSQLSTSPSACTFWCAVGVGALVKGSPVESVANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHP-ECEQGDSQVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHCEFA-RGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVTSPLLGDVDGA-SEMGDDTIAAADWLDVTHGMLDATD 2454
            MQ T+LLRHSSSGALL     PLKRFR+SASPATGLVGMQE+ FLS+FFGCVGF+PLTTPSHIRGEMV+MM    A H+P A  D  +QGQFGA+F++ GITTG+QLS  PSACTFWCAVGVGALVKGSPVESVANY RLAR ALDAYTGP NAE+A A AILGYFYGFMGD A F+EYL L+DSF T SIE+GST++LPAGFAE+++ +QTVKVY G +D   I+  G++R   PQ+NPA +EGD++ Y  QSL A E++VF KAC K + R  LSDDEP  E+ GG SPHG  PQ E+VS+A+  GL+DGL+DF  LQET DR NIR GI GL+IN  L FQ A  GDA G LERLG+CVE FERYPGVC C M W H +HS LGALAAI   RAR LYNRLRD+YNPSRP + LPAPPLEEW G S+FCD FQCR  EG+IAS+A ++F  P   TSN T      C +   +VV EE H  SI S G  PE A GS + APCS GDKP ASTS WELNQ   PQ GPP GPSLS SH+HC     GG S TD YSGAV  CGGGV +GLV  VP MS+  P L  VDG   E GDDTIAAADWLDVTH ML A D
Sbjct:    1 MQSTELLRHSSSGALLACGMLPLKRFRLSASPATGLVGMQENTFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNILPAGFAEIIRLEQTVKVYTGHLDAAYIDFLGSRRGDPPQVNPAANEGDLFRYFSQSLNAFEELVFEKACEKSSIRRHLSDDEPWEEDRGGGSPHGAAPQAEDVSDAMVMGLQDGLIDFEHLQETVDRSNIRKGIGGLLINMYLAFQKAGKGDAGGALERLGHCVEAFERYPGVCRCMMLWCHASHSILGALAAIKSSRARELYNRLRDVYNPSRPASFLPAPPLEEWHGTSSFCDDFQCRCFEGIIASRARNLFPAPSDCTSNNTDQQQTNCTEDYLEVVDEE-HDGSIISAGVIPEKAIGSIMDAPCSNGDKPMASTSLWELNQEPAPQMGPPVGPSLSTSHVHCCGPDTGGGSGTDIYSGAVEGCGGGVLAGLVAPVPDMSLRLPELTQVDGVPEETGDDTIAAADWLDVTHAMLGAFD 618          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: D8LU25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU25_ECTSI)

HSP 1 Score: 724 bits (1870), Expect = 1.630e-249
Identity = 388/627 (61.88%), Postives = 446/627 (71.13%), Query Frame = 1
Query:  622 MQPTKLLRHSSSGALL-----PLKRFRVSASPATGLVGMQESVFLSNFFGCVGFVPLTTPSHIRGEMVKMMASDAAQHQPGAPQDFPEQGQFGAVFTDGGITTGSQLSTSPSACTFWCAVGVGALVKGSPVESVANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQG----DSQVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHCEFARGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVTSPLLGDVDGASE-MGDDTIAAADWLDVTHGMLDATDDKNSVI 2472
            MQ T+LLRHSSSG LL     PLKRFR++ASPATGLVGMQE+VFLS+FFGCVGF+PLTTPSHIRGEMV+MM    A H+P A  D  +QGQFGA+F++ GITTG+QLS  PSACTFWCAVGVGALVKGSPVESVANY RLAR ALDAYTGP NAE+AKA AI GYFYGFMGD A F+EYL L+DSF T SIE+GSTD+LPAGFAE+++ KQTVKVYAG +D   I+  G++R+  PQ+NPA +EGD+Y Y  Q+  A E++VF KA                 E+ GG S HG  PQ E+VS+A+   LKDGL+DFG LQET DRPNIR GI GL++N  L F  A +GD  G  ERL +CVEVFERYPGVC C M W H +HS L ALAAI   RAR LYNRL       RP + LPAPPL+EWRG SAFCD FQCR  EG+IASQA S+F  P    SNC+ ++ + +Q     DS  V +E H   I S G  PENA GS + APCS GDKP ASTSSWELNQ       PP GPSLS SH+HCE  RG AS  DA SGAV  CGGGV SGLV  VP +S+  P L   DG  E  G+DTIA ADWLDVTH ML A D  NS +
Sbjct:    1 MQSTELLRHSSSGVLLDCGMLPLKRFRLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAISGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKVYAGNLDAAYIDFLGSRRREPPQVNPAANEGDLYRYFCQASAAFEELVFEKAXXXXXXXXXXXXXXXXXEDRGGGSSHGADPQAEDVSDAMVTALKDGLIDFGHLQETVDRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLXXXXXXFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAP----SNCSSNNTDLQQTHCTEDSLEVADEDHDGGIVSAGVIPENAIGSIMAAPCSNGDKPMASTSSWELNQEPALPMSPPVGPSLSTSHVHCEPDRGAASGPDACSGAVEGCGGGVLSGLVAPVPDVSLRLPELRQADGVPEDPGEDTIATADWLDVTHAMLGAIDRINSAL 623          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE)

HSP 1 Score: 686 bits (1770), Expect = 2.450e-233
Identity = 374/662 (56.50%), Postives = 455/662 (68.73%), Query Frame = 1
Query:  523 SRCLRAKVQCTYIKRKSTHPEYQRKQQLR--GPDGMQPTKLLRHSSSGALLP-----LKRFRVSASPATGLVGMQESVFLSNFFGCVGFVPLTTPSHIRGEMVKMMASDAAQHQPGAPQDFPEQGQFGAVFTDGGITTGSQLSTSPSACTFWCAVGVGALVKGSPVESVANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQG-DSQVVHEEYHTSSIGSV--GATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHC-EFARGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVTSPLLGDVDGASE-MGDDTIAAADWLDVTHGMLDATDDKNSVI 2472
            SRCLRA V+CTY KRK   P+  R+ Q R  GP G+Q   + R S+SG LLP     LKR ++SASPATGLVGMQE+ FLS+FFGCVGF+P T+ SHIRG MV+MMA   AQHQPGA  + PEQ QFG  FT+ GIT G+QL T PS CTFWCAVG+GAL KGSPVESVANY RLAR A+DAYTGP +A++A+A AILGYFYGFMGD A FEEYL+LSDSF  +SIEQGST  LP+GF E+V +K+ VKV+ G VD  D   S  + Q  PQINPA +E DV+ +V QS+ A  Q+V  +AC K ATR   SDD P  E+ G  SPHGN P+VEE+S+A+  G K GL+DF  LQE  D PN+RTG+ G +IN  L F  A +GDA G LE++G+CVEV ERYPGVC   + W H  H+AL ALAA+DD RARGLYNRLR+ YN  RP  SLPAPPLE W+G+SAFCD+F C +  G+IAS+ +SVF+TPP+S+ N  G   +  +G D  VV EE+H   IG V  G TPE AT S +   CS GDKP ASTSSWE N     Q  PP     S+S++H  E ++ G   TD +S  V  CG  V SG++ + P    T P L ++DG ++   DD IA  DWLD TH MLD   DK+  I
Sbjct:   39 SRCLRAGVRCTYSKRKPHQPQLGRQHQRRPRGPAGVQTADMFRPSASGTLLPGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTAQHQPGARHNSPEQSQFGDTFTEDGITPGNQLLTGPSCCTFWCAVGMGALAKGSPVESVANYSRLARDAMDAYTGPVDADVAEAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKECVKVFCGNVDAVDT-GSFTRHQDRPQINPAATEEDVFRFVAQSVEAFVQLVVEEACGKRATRSCSSDDGPYEEDRGDASPHGNAPRVEEISDAMVTGFKIGLLDFENLQEAVDLPNVRTGMGGFLINMNLVFHRAANGDAVGMLEKIGHCVEVLERYPGVCRFMLGWCHLVHAALAALAAMDDCRARGLYNRLREAYNQFRPSASLPAPPLEAWQGLSAFCDHFHCMLFGGVIASERLSVFTTPPYSSRNGAGFQQDHLKGEDVPVVDEEHH---IGIVWGGVTPEEATSSIMDVLCSNGDKPMASTSSWEWNHERALQMSPPARSRPSSSNVHRRESSKDGIQFTDLFSNEVERCGEDVFSGVMAQYPDDGFTLPELRELDGTTQDTMDDAIAVPDWLDTTHAMLDEVGDKSPGI 696          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: D8LU28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU28_ECTSI)

HSP 1 Score: 642 bits (1657), Expect = 1.930e-218
Identity = 333/488 (68.24%), Postives = 377/488 (77.25%), Query Frame = 1
Query:  997 VESVANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQGDSQVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHCEFARGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVTSPLLGDVDGA-SEMGDDTIAAADWLDVTHGMLDATDD 2457
            +E VANY +LAR ALDAYTGP NAE+AKA AILGY Y +MGD  K+EEYL+LS SF   SIEQGSTDMLPAGFAEMV HK+T K Y+G VD TD  S GA  QH  QINPA SEGDV+ YV QSL+A EQVVF K+C   A R   SDD+   E +GG +P G+ PQVEEVS+A+ AG KDGL++F  LQ+T DRPN+ TGIVGL+IN TL +Q A +GDA G LER G CV+VFERYPGVC C M W H AH  LG+LAAIDD RA GLYNRLRD+YNPSRP +SLPAPPLEEWRGISAFCD FQCR+ EG+IASQA SVFS P H TSNCTGS  ECE+   Q V EE ++S + SVGATPE ATGS + AP + GDKP AS  SWELN   TPQT P  GPSLS SHLHC+  RGG SDTD  + AVVECGGGV SGLVG+VP +S+TSPLLGD+DGA  E+ DDTIAAADWLDVTH MLDATD+
Sbjct:   72 IEEVANYLQLARDALDAYTGPVNAEVAKAWAILGYLYSYMGDTEKYEEYLKLSASFLIDSIEQGSTDMLPAGFAEMVHHKETAKAYSGNVDATDNGSLGAHHQHPLQINPAASEGDVFRYVAQSLIAFEQVVFEKSCENSAARRHSSDDKLCDETTGGATPLGHTPQVEEVSDAMVAGFKDGLIEFEYLQDTVDRPNVGTGIVGLLINMTLAYQKAANGDAGGALERFGQCVDVFERYPGVCRC-MFWCHIAHGILGSLAAIDDSRAGGLYNRLRDVYNPSRPSSSLPAPPLEEWRGISAFCDDFQCRLTEGMIASQAFSVFSAPTHCTSNCTGSQNECEEASLQFVDEEQNSSMV-SVGATPEVATGSIMDAPRTNGDKPMASNYSWELNLEPTPQTSPTVGPSLSPSHLHCKPVRGGESDTDVLNSAVVECGGGVLSGLVGQVPDVSLTSPLLGDIDGAREEIWDDTIAAADWLDVTHAMLDATDE 557          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: D8LU19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU19_ECTSI)

HSP 1 Score: 579 bits (1492), Expect = 2.280e-194
Identity = 320/531 (60.26%), Postives = 365/531 (68.74%), Query Frame = 1
Query:  664 LLPLKRFRVSASPATGLVGMQESVFLSNFFGCVGFVPLTTPSHIRGEMVKMMASDAAQHQPGAPQDFPEQGQFGAVFTDGGITTGSQLSTSPSACTFWCAVGVGALVKGSPVESVANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQGDS-QVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHCEFARGG 2253
            +L LKRFR+SASPATGLVGMQE+ FLS+FFGCVG +PLTTPSHIRG MVKMM     Q Q GA  D  EQGQFGA+F++ GITTG+QL T PS CTFWCAVGVGA++KGSPVESVANY RLAR ALDAY GP NAE+AKA AILGYF+G MGDMA + EYL+LS SF   SIEQGSTDMLPAGFAE+++ K  V+VY+G +D T IES  AQRQ +PQI PA  EGD+Y YV QSL A EQ VF +AC   ATR Q  ++E   +N  G  PH N PQ EEVS  + A LKDGL+DF  LQE  DRPNIRTGI GL+IN                                +C       H A   LGALAAIDD RARGLY RLR++YNPSRP  SLPAPPLEEWRGISAFCD FQCRI+E +I SQA++VFSTPP   S+C GS       D+ Q V +E    SI S G TP +ATGS + A CS  DKP A TSS E +Q   P+  PP GPSLS S LH +  RGG
Sbjct:    1 MLSLKRFRLSASPATGLVGMQENAFLSDFFGCVGLLPLTTPSHIRGVMVKMMTGPTVQQQLGALHDSLEQGQFGAIFSEDGITTGNQLLTGPSCCTFWCAVGVGAVLKGSPVESVANYSRLARDALDAYKGPVNAEVAKAWAILGYFHGSMGDMANYVEYLKLSGSFLMDSIEQGSTDMLPAGFAEIIRQKDNVQVYSGHLDATGIESLVAQRQDAPQIKPAACEGDLYRYVAQSLTAFEQDVFERACENTATRRQSRENEACEDNRSGAIPHDNAPQAEEVSAIMVAALKDGLIDFEHLQEIADRPNIRTGIGGLLIN--------------------------------MC-------HLAQCVLGALAAIDDSRARGLYARLREVYNPSRPSYSLPAPPLEEWRGISAFCDDFQCRIYECIITSQALTVFSTPPLWASDCAGSQRTQRTEDNLQAVDKEEDRGSIVSAGVTPGDATGS-MSASCSNADKPMACTSSCESHQGPAPEVCPPVGPSLSPSDLHFDSVRGG 491          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: D8LU23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU23_ECTSI)

HSP 1 Score: 533 bits (1374), Expect = 4.870e-177
Identity = 284/472 (60.17%), Postives = 328/472 (69.49%), Query Frame = 1
Query: 1060 GNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQGDSQVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHCEFARGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVTSPLLGDVDGASE-MGDDTIAAADWLDVTHGMLDATDDKNSVI 2472
            G   L +A AILGYFYGFMGD   F+EYL L+DSF T SIE+GSTD+LPAGFAE+V HKQTVK Y+G +D    +S  A+RQH P++NPA +EGD++ Y  QS  A E++VF KAC K A R  LS DEP  E     +PHGNVPQVEEVS+A+   LK GL+DF  LQE  DRPNIR GI GL+IN  L FQ A +GD  G LER G+CVEVFERYPGVC C + W   +HS LGALAAIDD RAR LYNRLRD+YNPSRP + LPAPPLEEWRG SAFCD FQCR+ +G+IASQA SVFS+PP  TSN  G   + E+ D  VV EE     I   G  P+  TGS +V PCS G KP AS SSW LNQ   PQT PP G S S SHLH E  RGGAS T  ++ AV  CGGG  SGLVG+VPGMS+    L D DG  +  GDDTIA ADWLDV+  ML A D+  S +
Sbjct:   19 GMLPLKRAWAILGYFYGFMGDTGMFQEYLGLADSFLTDSIERGSTDILPAGFAEIVHHKQTVKAYSGNLDPAHDDSLAARRQHLPEVNPAANEGDLFRYFSQSQTAFEELVFEKACEKSAARRHLSADEPCEEGRCDANPHGNVPQVEEVSDAMVIALKAGLLDFEHLQEAVDRPNIRKGIGGLLINVNLAFQKATNGDTGGALERFGHCVEVFERYPGVCRCMILWCRMSHSLLGALAAIDDSRARELYNRLRDVYNPSRPASFLPAPPLEEWRGTSAFCDDFQCRLFDGIIASQAFSVFSSPPDCTSNYAGL--QHEEDDVPVVDEE-RDGGIAWAGVIPKEVTGSVMVTPCSNGVKPVASPSSWALNQEPAPQTNPPAGSSPSTSHLHRELGRGGASGTAIFNSAVEGCGGGALSGLVGQVPGMSLAWQELRDADGFPDGTGDDTIAEADWLDVSLVMLGAIDENGSAL 487          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: D8LU21_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU21_ECTSI)

HSP 1 Score: 526 bits (1356), Expect = 1.070e-172
Identity = 310/659 (47.04%), Postives = 379/659 (57.51%), Query Frame = 1
Query:  523 SRCLRAKVQCTYIKRKSTHPEYQRKQQLR--GPDGMQPTKLLRHSSSGALL-----PLKRFRVSASPATGLVGMQESVFLSNFFGCVGFVPLTTPSHIRGEMVKMMASDAAQHQPGAPQDFPEQGQFGAVFTDGGITTGSQLSTSPSACTFWCAVGVGALVKGSPVESVANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQGDSQVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHC-EFARGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVTSPLLGDVDGAS-EMGDDTIAAADWLDVTHGMLDATDDKNSVI 2472
            SRCL A V+CTY KRK   P+  R+ Q R  GP GMQ   LLR S+SG LL     PLKR ++SASPATGLVGMQE+ FLS+FFGCVGF+P TT                                                                                                  +A AILGYFYGFMGD A FEEYL+LSDSF  +SIEQGST  LP+GF E+V +K++VKVY G VD  DI+   A+RQ  PQINPA +E DV+ +V QSL A  Q+V  +AC K A R   SDD P  E+ G  SPH N P+ EE+S+A+  G K GL+DF  LQE  DRPN+RTG+ G +IN  L F  A +GDA G +E+LG+CVEV ERYPGVC C +QW H  H+AL ALA +DD RARGLYNRLR+ YNP RPP SLPAPPLEEW+G++AFCD+FQCR+  G+IAS+ +S F+TPP  + N         + +   V +E H S I   G TPE AT S + A CS+GDK  +STSSWE N     Q  P      S+SH+H  E ++ G   TD +S  V  CG  V SG+V + P + +TSP L +VDG + E  DD IA ADWLD TH MLD    K+  I
Sbjct:   39 SRCLGAGVRCTYRKRKPHQPQPGRQHQRRPRGPAGMQTADLLRLSASGTLLACRMLPLKRLKLSASPATGLVGMQENTFLSDFFGCVGFMPFTT-------------------------------------------------------------------------------------------------RRAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKESVKVYCGNVDAVDIDFF-ARRQDRPQINPAANEEDVFRFVAQSLEAFVQLVVAEACEKRAIRSCSSDDGPYEEDIGSASPHSNAPRAEEMSDAMVTGFKVGLLDFENLQEAVDRPNVRTGMGGFLINMNLVFHRAANGDAVGMVEKLGHCVEVLERYPGVCRCMLQWCHLVHAALAALAVMDDSRARGLYNRLREAYNPFRPPASLPAPPLEEWQGLAAFCDHFQCRLVAGVIASERLSAFTTPPDCSRNDASFQQAHLKKEGVPVVDEEHHSDIVWAGVTPEEATSSNMDALCSSGDKSMSSTSSWEWNHERALQASPTARLGPSSSHVHRRESSKRGIHGTDLFSNEVERCGEDVVSGVVAQFPDVGLTSPELREVDGTTQEAVDDAIAVADWLDTTHAMLDEISYKSPGI 599          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: D7FTG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTG5_ECTSI)

HSP 1 Score: 514 bits (1323), Expect = 1.500e-169
Identity = 272/467 (58.24%), Postives = 335/467 (71.73%), Query Frame = 1
Query: 1078 KARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQGDSQVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHCEFARGGASD-TDAYSGAVVECG-GGVDSGLVGRVPGMSVTSPLLGDVDGASEMGDDTIAAADWLDVTHGMLDATDDKNSVI 2472
            +A AILGYF+G MGDMA +EEYL+LS SF   S++QGSTDMLPAGFAE+V  K TV+VY+G +D   IES G  RQ +PQI PA  EGD+Y YV QS  A EQVVF +AC+  ATR    +DEP  +N GG  PHG+ PQ EEVS+ + A LK+GL+DF  LQET DRPNIRTG+ GL+IN TL FQ AV+GDA G L+R G+C+EVFERYPG+C   + W H AH  LG+LAAIDD RARGLY+RLR++YNPSR  +SLPAPPLEEWRGISAFCD+F CRI EG+IA QA+SVFST P    +  GS  +  + + Q V  E H SSIGS G TPE+ATGS +VA CS  +KP A TSSWE +Q    Q   P GPS+   ++H E  +GG SD TD  SGA+  CG GGV +G V  VP M +TSP L +VDG +  GDD + A+DWLD++  M+DA +DK++ +
Sbjct:   14 RAWAILGYFHGSMGDMANYEEYLKLSGSFLIDSMQQGSTDMLPAGFAEIVSQKDTVQVYSGHLDAAGIESLGTLRQDAPQIKPAACEGDLYRYVAQSHAAFEQVVFERACQNSATRRHPKEDEPCEDNGGGAIPHGSAPQAEEVSDTMVAALKNGLMDFEHLQETADRPNIRTGVGGLLINITLAFQKAVNGDAAGALKRFGHCIEVFERYPGLCRYRILWCHLAHGILGSLAAIDDSRARGLYSRLREVYNPSRLSSSLPAPPLEEWRGISAFCDHFLCRIFEGVIARQALSVFSTQPLCARSGAGS--QGTEDNLQTVEYE-HRSSIGSAGVTPEDATGSIMVASCSNANKPMACTSSWESHQEPASQMSLPVGPSVFPLNVHSEPVKGGTSDDTDVLSGAIEGCGSGGVIAGSVPHVPDMPLTSPGLREVDGTTT-GDDVLTASDWLDISQAMMDAGEDKDAAL 476          
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Match: D8LU26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU26_ECTSI)

HSP 1 Score: 510 bits (1314), Expect = 4.220e-168
Identity = 284/521 (54.51%), Postives = 336/521 (64.49%), Query Frame = 1
Query: 1006 VANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLELSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQRQHSPQ-------------------------------INPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEPRLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTGIVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHFAHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAFCDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQGDSQVVHEEYHTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPPDGPSLSASHLHCEFARGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVTSPLLGDVDG-ASEMGDDTIAAADWLDVTHGMLDATDDKNSVI 2472
            VA Y RLARGALDAYTGP +AE+AKA AIL Y YG+MGD A+FEEYLEL+D+F T+SIEQGSTDMLPAGFAEM+ +KQTV++ +G VD T IES GA+RQH PQ                               INPA SE D+Y+YV +S+VA +Q+ F KAC+  A   Q SD EP LEN GGV+P GN PQ EEVS+A+ AGL DGL DFGQLQE  DRPNIRTG+ GL+IN                                +C       H AH  LGALA IDD RA+GLYNRL+      RP   LPAPPLE+WRGISAFCD+FQCR++EG+IASQ MS FSTPP   SN  GS  +C+QG S +  EE+H + +   G  PENATG+ + APCS GD+P ASTSSWEL Q   P+T PP GPS S+S ++CE AR G SD+D  + AV  CGGG  SG V  VP MS+ SP L +VDG A E  +D I AADWLDVTH ML A DD    +
Sbjct:    5 VAIYSRLARGALDAYTGPVDAEVAKAWAILAYLYGYMGDTAEFEEYLELADAFLTASIEQGSTDMLPAGFAEMIHYKQTVRMQSGNVDATHIESWGARRQHPPQVLSQRVEGNGRAVWSCIITRSALLPLLDTIQINPAASERDLYVYVARSIVAFDQMAFEKACKDSAACEQSSDHEPCLENRGGVTPQGNPPQTEEVSDAMVAGLNDGLFDFGQLQEAVDRPNIRTGVGGLIIN--------------------------------MC-------HLAHGILGALATIDDSRAQGLYNRLQXXXXRFRPHAYLPAPPLEKWRGISAFCDHFQCRVNEGIIASQGMSAFSTPPVCASNYAGSQTKCKQGGSHIAVEEHHDNMV-LAGVIPENATGAMMAAPCSNGDRPMASTSSWELLQDPAPRTDPPAGPSFSSSQVNCEPARAGRSDSDVSNSAVEGCGGGAVSGWVAHVPDMSLRSPELREVDGGAEETWNDKIPAADWLDVTHAMLGAIDDDGPAL 485          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1227.1753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBJ1_9PHAE6.390e-26864.32Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU24_ECTSI3.860e-26465.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU25_ECTSI1.630e-24961.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8E7_9PHAE2.450e-23356.50Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU28_ECTSI1.930e-21868.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU19_ECTSI2.280e-19460.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU23_ECTSI4.870e-17760.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU21_ECTSI1.070e-17247.04Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTG5_ECTSI1.500e-16958.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU26_ECTSI4.220e-16854.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1227contigE-fasciculatus_F_contig1227:1889..11672 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons12
Model size3050
Cds size2076
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1227.1753.1prot_E-fasciculatus_F_contig1227.1753.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1227 2288..11097 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927734.244157-UTR-E-fasciculatus_F_contig1227:1888..22871622927734.244157-UTR-E-fasciculatus_F_contig1227:1888..2287Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1227 1889..2287 +
1695995671.487832-UTR-E-fasciculatus_F_contig1227:1888..22871695995671.487832-UTR-E-fasciculatus_F_contig1227:1888..2287Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1227 1889..2287 +
1622927734.417401-UTR-E-fasciculatus_F_contig1227:11097..116721622927734.417401-UTR-E-fasciculatus_F_contig1227:11097..11672Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1227 11098..11672 +
1695995671.6459413-UTR-E-fasciculatus_F_contig1227:11097..116721695995671.6459413-UTR-E-fasciculatus_F_contig1227:11097..11672Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1227 11098..11672 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927734.2573752-CDS-E-fasciculatus_F_contig1227:2287..25681622927734.2573752-CDS-E-fasciculatus_F_contig1227:2287..2568Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 2288..2568 +
1695995671.50552-CDS-E-fasciculatus_F_contig1227:2287..25681695995671.50552-CDS-E-fasciculatus_F_contig1227:2287..2568Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 2288..2568 +
1622927734.2702792-CDS-E-fasciculatus_F_contig1227:2953..30611622927734.2702792-CDS-E-fasciculatus_F_contig1227:2953..3061Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 2954..3061 +
1695995671.5176704-CDS-E-fasciculatus_F_contig1227:2953..30611695995671.5176704-CDS-E-fasciculatus_F_contig1227:2953..3061Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 2954..3061 +
1622927734.2857687-CDS-E-fasciculatus_F_contig1227:3253..34701622927734.2857687-CDS-E-fasciculatus_F_contig1227:3253..3470Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 3254..3470 +
1695995671.5272832-CDS-E-fasciculatus_F_contig1227:3253..34701695995671.5272832-CDS-E-fasciculatus_F_contig1227:3253..3470Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 3254..3470 +
1622927734.2970037-CDS-E-fasciculatus_F_contig1227:3674..37481622927734.2970037-CDS-E-fasciculatus_F_contig1227:3674..3748Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 3675..3748 +
1695995671.536615-CDS-E-fasciculatus_F_contig1227:3674..37481695995671.536615-CDS-E-fasciculatus_F_contig1227:3674..3748Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 3675..3748 +
1622927734.310354-CDS-E-fasciculatus_F_contig1227:4197..42431622927734.310354-CDS-E-fasciculatus_F_contig1227:4197..4243Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 4198..4243 +
1695995671.5471408-CDS-E-fasciculatus_F_contig1227:4197..42431695995671.5471408-CDS-E-fasciculatus_F_contig1227:4197..4243Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 4198..4243 +
1622927734.32261-CDS-E-fasciculatus_F_contig1227:4467..45511622927734.32261-CDS-E-fasciculatus_F_contig1227:4467..4551Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 4468..4551 +
1695995671.5640917-CDS-E-fasciculatus_F_contig1227:4467..45511695995671.5640917-CDS-E-fasciculatus_F_contig1227:4467..4551Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 4468..4551 +
1622927734.334785-CDS-E-fasciculatus_F_contig1227:4933..50411622927734.334785-CDS-E-fasciculatus_F_contig1227:4933..5041Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 4934..5041 +
1695995671.5856993-CDS-E-fasciculatus_F_contig1227:4933..50411695995671.5856993-CDS-E-fasciculatus_F_contig1227:4933..5041Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 4934..5041 +
1622927734.348415-CDS-E-fasciculatus_F_contig1227:8356..86191622927734.348415-CDS-E-fasciculatus_F_contig1227:8356..8619Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 8357..8619 +
1695995671.6029155-CDS-E-fasciculatus_F_contig1227:8356..86191695995671.6029155-CDS-E-fasciculatus_F_contig1227:8356..8619Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 8357..8619 +
1622927734.3633769-CDS-E-fasciculatus_F_contig1227:8828..88701622927734.3633769-CDS-E-fasciculatus_F_contig1227:8828..8870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 8829..8870 +
1695995671.6120775-CDS-E-fasciculatus_F_contig1227:8828..88701695995671.6120775-CDS-E-fasciculatus_F_contig1227:8828..8870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 8829..8870 +
1622927734.3774445-CDS-E-fasciculatus_F_contig1227:9104..92211622927734.3774445-CDS-E-fasciculatus_F_contig1227:9104..9221Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 9105..9221 +
1695995671.6202443-CDS-E-fasciculatus_F_contig1227:9104..92211695995671.6202443-CDS-E-fasciculatus_F_contig1227:9104..9221Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 9105..9221 +
1622927734.3880017-CDS-E-fasciculatus_F_contig1227:9514..96941622927734.3880017-CDS-E-fasciculatus_F_contig1227:9514..9694Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 9515..9694 +
1695995671.628975-CDS-E-fasciculatus_F_contig1227:9514..96941695995671.628975-CDS-E-fasciculatus_F_contig1227:9514..9694Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 9515..9694 +
1622927734.4027736-CDS-E-fasciculatus_F_contig1227:10541..110971622927734.4027736-CDS-E-fasciculatus_F_contig1227:10541..11097Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 10542..11097 +
1695995671.637954-CDS-E-fasciculatus_F_contig1227:10541..110971695995671.637954-CDS-E-fasciculatus_F_contig1227:10541..11097Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1227 10542..11097 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1227.1753.1

>prot_E-fasciculatus_F_contig1227.1753.1 ID=prot_E-fasciculatus_F_contig1227.1753.1|Name=mRNA_E-fasciculatus_F_contig1227.1753.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=692bp
MFPTAGIPPVCRTCLEMRLLGLHTLFQNNIRRRLPLVHAFHSRCLRAKVQ
CTYIKRKSTHPEYQRKQQLRGPDGMQPTKLLRHSSSGALLPLKRFRVSAS
PATGLVGMQESVFLSNFFGCVGFVPLTTPSHIRGEMVKMMASDAAQHQPG
APQDFPEQGQFGAVFTDGGITTGSQLSTSPSACTFWCAVGVGALVKGSPV
ESVANYFRLARGALDAYTGPGNAELAKARAILGYFYGFMGDMAKFEEYLE
LSDSFYTSSIEQGSTDMLPAGFAEMVQHKQTVKVYAGKVDFTDIESSGAQ
RQHSPQINPAVSEGDVYMYVIQSLVALEQVVFGKACRKMATRGQLSDDEP
RLENSGGVSPHGNVPQVEEVSEAIAAGLKDGLVDFGQLQETFDRPNIRTG
IVGLVINTTLTFQNAVSGDAYGTLERLGYCVEVFERYPGVCGCTMQWGHF
AHSALGALAAIDDPRARGLYNRLRDIYNPSRPPTSLPAPPLEEWRGISAF
CDYFQCRIHEGLIASQAMSVFSTPPHSTSNCTGSHPECEQGDSQVVHEEY
HTSSIGSVGATPENATGSTIVAPCSTGDKPKASTSSWELNQASTPQTGPP
DGPSLSASHLHCEFARGGASDTDAYSGAVVECGGGVDSGLVGRVPGMSVT
SPLLGDVDGASEMGDDTIAAADWLDVTHGMLDATDDKNSVI*
back to top

mRNA from alignment at E-fasciculatus_F_contig1227:1889..11672+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1227.1753.1 ID=mRNA_E-fasciculatus_F_contig1227.1753.1|Name=mRNA_E-fasciculatus_F_contig1227.1753.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9784bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1227:1889..11672+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGTTGGAAATGATGGTCATAAACTCAACCGTGTCAATATGACTCCAGGAG CTATCGGCCCGGCTGAATAGGAAAATGAGTACTGAGTTTCAGATTCAAAC CTAAACGTCGCAACGTCGCTGTTCATCAGCTTCTGTGACACGGATAGATA CCACATATTTTAGTTACGTTCCTCAATCGTTCGACGAAGAGCGCCGGGCG CGGCGCTAGTCTGTTTTTAAGATGTACCACGAGGATAGAATTCCGTGGCG GTAGTCAGAGCTAAATACTCGTGTAGCGGTTTTGAACCGTGGCTCGTGCG AAAACATCGGTGATTGTCAATCCGGAGCTAGCTGTGGCGAAGATCGGAAT TTCGGAGAATCGAAGCGCACTTACAACACGTCTTGCATCATTCTTGAATA TGTTTCCCACTGCCGGAATTCCACCAGTGTGTCGCACATGTTTAGAAATG CGGCTGCTCGGACTGCATACACTGTTCCAGAATAACATTCGGCGGCGACT CCCCCTCGTGCATGCATTCCATAGCCGGTGCCTACGAGCTAAAGTCCAAT GCACCTACATCAAGCGGAAGTCCACCCATCCTGAGTATCAGCGCAAGCAG CAACTGCGTGGTCCCGATGGCATGCAGCCGACGAAGTTGTTGCGCCACTC GTCATCTGGCGCACTCTTGCCTTTGAAGAGGTCAGTCGTCTCCAATGGCC GCTGTTGGTTGTATGGACTAGCACTCGAAATGCAAACAGTCCTCTTCCGC TTAGTCAGAAAACCAGTGTGCGCCCCATCTAATTCAACCTTTACGCCAGT AGAGTCAAGAATCGTGGGTGCAGGAAAGAGAAGGACGAAACCGTGGAGAA CTTGTTGCCTATTCGGTGCATGCCACGCTTGAGCGAATTTCACCGTTGAC CATCACCTCCAAACACATCGAACACGTCGTTACCGTGAGTTTCAAGCTCA AGGAGGACAGAGGGTGTTCTCGACGATGAAGAGGCCTCCAAGTCTTGCAT GTCGTATCGGGCGGTAGCTTTTTGCACGATCTCACCACGCCCGCACCCAT GTTCTGCTGTACCAGGTTCAGGGTAAGTGCATCTCCAGCGACCGGACTTG TGGGCATGCAGGAGAGCGTATTCCTCAGTAATTTCTTCGGCTGCGTGGGC TTCGTGCCACTCACCACCCCAAGGTGCAGATAACGTTGTGATGGTATACA TTTCAAAGGAGTGGCTGCAACTCACCGCCGCCGACGGTCTCTGATTGTGT CCCGTTTGTATGCTGCGGAGGGGGGCCACCGTTTCGTCCGAGCGATGGTA GTTACGGGTACCCTTGAGTTAATCGCCCAAACCAAGACTCCAGTTCGTTT GACTATTTTCGCCAGCCACATCCGCGGAGAGATGGTGAAGATGATGGCCA GCGACGCTGCCCAACACCAGCCTGGCGCTCCGCAAGACTTCCCCGAGCAA GGCCAGTTTGGCGCCGTCTTCACCGATGGTGGCATCACCACGGGAAGTCA GCTTTCGACGAGTCCCTCCGCTTGCACATTTTGGTGTGCAGTTGGTGTGG GAGCTCTTGTGAAGGGAAGCCCCGTTGAATCGGTGAGAAGAAGTGAAGTG CTTTTCTTGACCTACCCTGTACGAGCAGAAGGACCGTGTTCCCCGTTGAA TTCGCTCATTCTTGCTTGGCGCCGTTGGTTCTAGTGGTGTGCAGCTGCTA ACCGATGCAAGTGCATGCTACTACAGGGAGTCACCAGTCAAAACATCGCC CGCGAATAGCAACACCTCCCAAACATGTCGATAAAGGTTGCGAACTACTT CCGGCTGGCGAGAGGTGCACTGGACGCCTACACTGGCCCTGGGAATGCAG AGTTAGCAAAGTGAGTTACACGAAGCTATTGCACCGTCAGGGCACTCATT GTGGTAACCCCTGCTAAATATTTCCACATTAATCGCGTGGCGCGTATCTG TTGGAGATGTTGGTTCACGCTATGTTTGCTTGCTGGCCAAGTGCATCATT GCACAAACATGAGCCGAGCAATCAGACTTGTAACGCCACAATGTCAAGGG TTAGTGCCGTACGCCACACATGATTCCACGCTCCCGCAATGGTTTCGTAA AACTCGGCATCTGCACGCCACAGTGAGGCTGGCAATACTGTCGGTGTTTG GAAATGCTGAAATTGTACCTTTCGAATGCCACCGTTTGTTCTTTGATATT CTCGAAACCCGGGGATGGACTCGTACACGGCACACGGTAGTCCTTCCCGT TCAACCCCGCATACCGCCAGCCCATCTCCTGTCCCGTCCTTGCGTCAACT TTAATTCAGGGCGCGGGCGATCCTGGGCTACTTCTACGGTTTCATGGGAG ACATGGTGAGCACGACTCCGGCGGGAGGTACGGCAACCTTTCGCCGTTGT GCCCGGGTGTGCACACGAGGAGACGCTTCTCTTGCCTATCTATAGACCCA ATCGCTTGATAACATTTCTACCGCCAACGGCACCACAAAGTTTGGAAATG GTCTACTCCAACCGGATATCATCCCTCGACCCACCCATACTATATCTCCG CCGTGTACGAATGTACTCCTGTGTTCCAGGCGAAGTTTGAAGAGTACCTG GAGCTTTCAGACTCTTTTTATACTTCTTCCATCGAGCAAGGGTCAACTGA CATGCTGCCAGCGGTGAGTGCTACATCATTGCTTTCTGATGGACCGTAGC CAATTCTAGACCTACTTTCCCTACCTGGCGAAACTGGTTATATGAAACCG ACTACCGCTATCTCCCAGAAGAGGACAGAAAATGTTGGCTCTCAACACGT CAACACCACCGATATACAGCAGCACCACCAAGACGCCTCTGGGGTTAGTC GGCTAGAATGCCGTTTGTATCAGGTGGAACCTCTCAGATGCGTTGTTATT TGTACCGTTCAGTGTCCATGAAGTGAATAAGAGCAGCAACGCTGGCATTG TTTCCGCCTCCGACCACGCTTGTACTTTGCCCTGTATTGTGTTGCAGTCC TGCGTGCCTACTGAACTCTCGCATACTCGCATGCATCTTGGCCAGGGATT CGCCGAGATGGTCCAACACAAGCAGACCGTTAAGGTGTACGCGGGCAAGG TAGACTTTACAGATATCGAGTCCTCGGGCGCACAACGTCAACATTCTCCG CAGGTGTGTCCTGTACCACGTAGCTGAAACTGGGTGGCCCACATGGCACT GTGTGCTCGTAGTCTGCGGCAGCCCCTAGCTCGTCTCCGTGATCGAAGAG GGCAAGCTCCTTGGAGCGCCCGTACCTGGCTGGCTGGCGTAGTAGACACC ATGGCAACGTTGTCTAGGAAGAACCGAGGCAAGCTAGCAAGCGTCACCAA TCGTGATTGGTACGGCACTCCGAAGACGACGTGGATAAAAAAAGCACTTC GAGCTCTTCGCAAAGAATGCATGCAAGCACCTTTGATTGCGTCAGCGACA TGGGAAGCCATCCCTAAATCCTCATAATATCCAATACCCGCGACGGCAAA TATGTGTAGGAGACTGGACAGCCGGCAAAGCAAACGGCATCAGCGCGTAT TTAGGTCGCCATTGTGTGTGCGCGACCGCACCAGTATAGATTGCCGTGTG GCAACGGTTTTTTTATTAGATATGTTTTTTGGGATTGATTTTGGCAGAGG AAGAGGACGGACGGACCCGAGTGAGTCGGAGCATATCATCAGACTGAAAA TAGTTCGACGATATCTGATGGATGTAGCTGCTGGTCCCCGTTCCTTGCTG TAACTCTTAGCATTATCTTGCACGGACGCACACAGACAGCAGTGCAGGCA GGACTCCAAAACGAATAAGCCCCCCGCTGCCACTCTACATAATACTCCAT GGCGGCGGCGTCGAACAAAACACACACACACCCGACGACGGTGTGGTAAC GCACCATGTCATGAAGTAGCACACCTGAGCGGGGTACAAGTGGTGCAAAA TCATACGGAAACTTCGAAGAGGCTCCGGCGGGAACTACACTGCAACGCTG TTCCAATTCCTTGCCTCCCGAAGGCTGTGTGGCGATAATATGTGGCAGCA AGCGCGTGGTAAGCGCTGCGACCGTACGATGGTTTGTCGTGCTGATGAAC TGATTCAACTCGTGGTGAACGCTGCGACCGTGGGATAGTTTGTTATTGAT TCAACACCGCGCGGTGGTTGTGTCCGCCTGTGTGTGTGACCCGGGGCATG CTTGCTTGCTGGTACACAGCAGCAGTCAACAGCAGCAGCAGTAGTATTAG TCGTATGTGTGGGCTTTGTCACTCTTTGCTCGTAGTTCGATCGCTCTGCT GCTGTGGTGTGTCCCTCTCGCCGTCAACGTGAATTTAATCGATGCTTGGC AAAACGTACGGCAGCGAGGGCGTGAACGATGTGACCGTCAGGCAAACGGA TGTTTTGTTGTATACCTACCACGTGTGCGTGTGTGACCCGTTCGTGTTGA TGGTGGACATCCGCAGTGCTTGTAGTCTACGCTAGCACACACCAGTTTAG CACATGTAGACTAGTAGGCAAGTTGGTTTCGCACGCTCTGCAGTGTGGAC GATATACAACAGATAGATCCGTGGTTCTGAACAAAGATATTGCTGTGTAC GCTATCCAATCTTGTCGCCCAAATGAAAGCGGTGCGGCAATACTTTAGTC TCTGCTGGCAAGAAGCGAAATATTTCCCTCCGGAGGCCACCCGCACATAC NNNNNNNNNNAAGAGCCATCGAATATGTCATCGAATCTAATTTGGCCATG CGGACATAACCCGCACGTCGGCAAGGTCCATCGAATGCTCTCGGTGGCAG ACATACGTACGTAGGATGTACCATCGCAGAACACCAGCAGTGGTAGATAG ATGTATGTACGGCAGGCACACGATCGATAGCGTGGCAGGCAGATAGATTG GTGTGTGGCGCGCAGCACACGGCTCACCCCCTACGTTCGTTTTCCACAAT CATGTCTAAGGCTGTGCAACTTATTCATATGCTGTTATTTCGTGTACCAG GTATGTTTGGAATCGGTCGTCATCCGAGTTTGAGCGGTAGACCCTTCTCT CCTCTTGGGGTTTTCTGTACGGTGCCGCTTCATGAACTGGAGGTTAACCC TACCCAGTACCTCCGCAAATGTTATTCTTCAAAAACGCTTGTCAACCATG AGTCGAGGGGCTAGAGTCCCTCCAAAGCTTCTGAGCTCCTTGACAGACAA AGGGTGACTTGGCTTCAGTATAGAAAGTGTCCCCATACCACGTGGGGAAA TTTTTATACTGAAGCCAAGTCAGCAATTTGTTCAAGTTCTAGGCGATGTA CAGTTTTACGACCTACTGTAGGGGACGCGCGGCTTGGGAGATGGTGACAG CAAGTCAAAGGCCGAGGAGAGGCATATCCCACACAGCGTACCACCTCAGC CAAGCATGATAAGACCAATGGTTCTCACGTGCGTTTCACACTGCGGTGCC TAGGGTGACTACAGTACGGTGCGGTAAATTGGCATTTGAATGATGTGTCC CCAAAAGGGCTTCCAGTACTACAGTAGGAGGGTTGCTCGAAAGCATCGAA GCCCAAGAACTCGAAGACAAGAACAGTTGCTCACATGAGAAATCTACGCA AACACTTAATGGTTGATGTTGCGTTTCTCTACAGAGGAAAGGAGAACCGA GCCTCAGGCTAAACACGAGTCTCGAGTGGGTGGCTCCCTCTGTACGCTGT TGGCTTTGCGGGGTTTGAATTGTTTGTATATTTCTGTCGTCAGTTCTCGG ATCTTTGCTTTAGTTCCCTGTGTTATATCCGATAATTCTGCAAACGCAGG AGTCCGGAAACTGATCAAGACCCCAAATGGTACACACCATTCCACTAGTC GCACCGACTAGAAGCCGACTAGTCCCGAGTTGTTCCCCCACCTTCGAAAC AAAAGGGATGGGAGGGCGGGAAGTGCTACATAGGCTGCCGCCACGTTGGG CAGCCACTGCTGTCCTCCCGTCTCTTCAAGTGTGGCTTCCTTTCGTTGTC TCACCACTTGCTACAGTTGAGACGAGCTTTCCTCCGCGGAATGGCAGAAC AAATCATAGACCTGCTCTGGTGACCCCGGGTTCCCAAACGAAAATGAGGC ATTCACGTTCTTCCGATTCGAAATAATCGTCAGGTTCTTACTTTCTGTTC CACAAACTTCTCTATCTTTAGGACTTGGAGAGTTCTCAGACGACGTTTCG GGTCAAGGTCAGAATGACGCTGATGCGAAGTCAAGACCACGAGCAGCAGC AACAAAGAAAATCGATTGGAGCATTGATTGTTGCGGGTACTTTTGACTCT GCGTGAGACAGCACGTCAACGTGATTCGCGCTTGGCACCATGCCTGCCTG ATACGTCGGCGTAAACTACTCCTGCTTGACAGAGAGTCGAGGGTTAGGGT AGGGCTGTACGATCGTGCATGATTACAAGACCTGCCTCTCTCCGCTCCTG CTGCTCAATATCATTCAGATCAACCCGGCTGTAAGCGAAGGGGACGTATA TATGTATGTTATCCAGTCGCTTGTGGCGCTCGAGCAAGTTGTATTCGGGA AAGCTTGCAGAAAGATGGCGACTCGCGGACAATTGAGCGATGATGAGCCT CGCTTGGAGAACAGCGGAGGTGTAAGCCCGCACGGTAACGTCCCCCAGGT GGAAGAGGTGTCAGAGGCTATAGCTGCCGGGTTGAAAGATGGCCTGGTCG ACTTCGGACAGCTTCAAGAAACTTTCGATCGGTGAGCATGGTCCAACTTT GCTTGAAGAATTGTTACGAGTGTCACGCGACAACTAACTGTATATCCACC GTGTGCTACTCCGGTGGGTGCCCGCTCTTTGTGGACTCGATCGTGTCAGC ATGAAGTTTCTCTCAGCTTACATACCCTCTTGTGGCGATGTTTCCCTTTT CCCCTCGTGGTCGGCCTTCACCTACCTGCATGGTGAGCAGACCAAACATT CGCACGGGTATCGTCGGCCTCGTCATTAACACGTAAGTCGACTTGACCCA ACGTGCTCCCGACTGCTTCAAACAGCCAAGAACGTTGCTGGGTAATTTGC GGGCGAAAGGCTCCGTTGATCTATGAGCACTATATCACCGCGTCTACACC GCCATACGAACGACTTCGTGTAGTGTAGAAATGGTACTGCTTTGGCATCC AATGATGACTCGCGACGTTACGTATAAGTTCGTCATGTCTAGAATGACGC GTTCCGTATGTGACAGGACCCTGACATTCCAAAATGCAGTGAGCGGGGAC GCTTATGGGACTTTGGAGAGGTTGGGGTATTGCGTCGAGGTATTCGAGCG GTACCCTGGCGTGTGTGGCTGCACGATGCAGTGGTGAGCCGATCGCATGA ACATCACCAACGCTGACATTGATACTCTGGCTATGATCCGAGTTCTGGGA CAAACCACGCCATTAGTCTGGACGCTAAGACGAGTATTCCTCAACAATTC AGTGATGGTTGCTCAATGTGAAGATTTTTGTGAGGACTCTTTCCTGGTAC GACTTGGACTACCGATTGCGAGGGACTAGCTATAGACATATCGGGCGGTC GTCATACAGGCGTGTCAAGGCATTCTCAGCTAAAAACCTTTTCCCTCATT GTATGCGTGCCCCCCACCACTGTAAGGGGTCACTTCGCACACAGTGCCCT GGGGGCCCTAGCTGCGATTGACGACCCCAGAGCTCGAGGACTGTACAACC GGTTGCGGGACATCTACAATCCGTCTCGCCCCCCCACCTCTCTGCCAGCG CCCCCGTTGGAGGAGTGGCGTGGGATATCTGCATTCTGCGATTATTTCCA GTGCAGGTGCGTTGGGTGGTTGGTATCCTGCCATGGCAGCGTCCCTTCCA GTGTACACTTGCTTTCGGGATAGGTGGGTTGTCCGAAAGTTTGAACACAG CGACTGACACCCTTGCCTGCAAGCGCAGCCGACTTCCGGGGACTCGTTGA TTCGCCTGGTGGCAGCGTTTCGAAGTTGGCAAATTATGGAAAGTGGGTAG AGCTGTTGCCAAATAGAGCACAGGGGGCCCGGAGGGTCGTTGTAGTTCGA TTTTATCGGAAGAACAACCCGTACGGGTTCCGATCGGCAAACGATTCTAT TGTTGTTGGATCGCTGGAATTCATGTTCATTTTTTCCATAGGCAAGAGCA AGTCCCGTGAGGTATGTACGTTTCGGGTGTCCGCTAAAGCACAACCTGTT GGGGCACCGCATGCCGTTACGTCTTGGAGGTTTGGCCATAAACACACGCA AAGCACTAGATGTCTCTACGCGCCCGGCGGTAATTTTGCTAATGCTTGCT AGATTGCCGAGCGGATTGCAGCCTTGCATTTGACGTGAAATCCAGATCTC TGTTCAGCGCCGACTATCTACGCTCTCCTACCTATTCAAATGAACGATAT GAGCTTCCGTTGTCACAACCCACATCCCAAAGTGAGGAGACAGAGCCCAA CGTTCCACTCCGAAGATAAGCCACAACTAACCCGTTGGGAATCTTTTCGC GGTTGCTGTTTCGCTCAACTTGCGGTTAATTGTTCCCTTCAGCGCTGGGC GAAGGCCTTGGCGTGGCAGTCCGTGTCCAAACCGACCCGTGCCACTCTGG GTATATCCAACCTCGCCCGCGCTCGCCCCCACTTTCCCCTTTTGCTTTTG AAGGATACATGAGGGTCTCATCGCGAGTCAAGCCATGAGCGTTTTCTCCA CCCCGCCCCACTCCACTAGCAACTGCACCGGCTCACATCCTGAATGCGAG CAAGGCGATTCGCAGGTTGTCCATGAGGAATATCATACTAGCAGCATTGG CTCGGTGGGTGCCACTCCCGAGAACGCGACTGGTTCCACCATTGTTGCCC CTTGCAGCACCGGAGACAAACCAAAGGCATCTACTAGCTCGTGGGAACTG AACCAAGCGTCTACGCCACAAACAGGCCCACCGGACGGACCGAGCTTGTC TGCTTCACATCTCCACTGTGAATTCGCCAGGGGAGGAGCAAGTGATACCG ACGCTTACAGCGGTGCGGTCGTTGAGTGTGGCGGTGGCGTCGATTCTGGC TTGGTAGGCCGAGTCCCCGGTATGTCCGTGACATCGCCGTTGTTGGGAGA CGTAGATGGGGCCTCAGAGATGGGGGATGATACCATTGCCGCGGCAGACT GGCTGGATGTTACCCATGGCATGTTGGATGCAACGGATGACAAGAATTCC GTTATTTGACGTTGACGAGGTTTGGTTGCTCGGGCCAAATTATGATGGGG GTTCGACTGTTGAATTTGTTCGCGAAACGACATCTTGAACGTGAATATAC AGCCCGGGTGGTAGAACAACCTGTACTGCAGTTTCTGTCTTGTTCGGCAT CGAATGCCAAGGTGCTGTAGTTCGTAATTCTAACGCCGCTCTTACGGGAG CAGCACGTTGCAAAAACAGCTTGAGTTGCAGAATTGTTTTTGCAGCTTTC GTGATGTACGCCTGGTATGGGAGAAAAAACCTGCAAGAAACGGTTTGCAA CTTTCGCTTTGGAACAAAATCGCGCGATCTGGCCCAAACGTTCTGCAGCT TTTGGAGGGTCGGGAAGGTCCAATAAAAGTTGCGCGGCGCAACTTCCGCC AATCCACATCCCGCGCCTACCCCTACCACGCACGTAGACCCCCTCTCCAG CTTCTTCAATTAGAAGGCACAGTCTTCGCCGATATCTTGACGATTACCAA ACGGCTTGCCTCATGAATGGTATCCGGAAGGAGGTGATGCCATGAGCTAT TGGGCAATGCCAAGATTTGGCGTCATGAGTTGCC
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1227:1889..11672+

>mRNA_E-fasciculatus_F_contig1227.1753.1 ID=mRNA_E-fasciculatus_F_contig1227.1753.1|Name=mRNA_E-fasciculatus_F_contig1227.1753.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4152bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1227:1889..11672+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTTTCCCACTGCCGGAATTCCACCAGTGTGTCGCACATGTTTAGAAAT
GCGGCTGCTCGGACTGCATACACTGTTCCAGAATAACATTCGGCGGCGAC
TCCCCCTCGTGCATGCATTCCATAGCCGGTGCCTACGAGCTAAAGTCCAA
TGCACCTACATCAAGCGGAAGTCCACCCATCCTGAGTATCAGCGCAAGCA
GCAACTGCGTGGTCCCGATGGCATGCAGCCGACGAAGTTGTTGCGCCACT
CGTCATCTGGCGCACTCTTGCCTTTGAAGAGATGTTTCCCACTGCCGGAA
TTCCACCAGTGTGTCGCACATGTTTAGAAATGCGGCTGCTCGGACTGCAT
ACACTGTTCCAGAATAACATTCGGCGGCGACTCCCCCTCGTGCATGCATT
CCATAGCCGGTGCCTACGAGCTAAAGTCCAATGCACCTACATCAAGCGGA
AGTCCACCCATCCTGAGTATCAGCGCAAGCAGCAACTGCGTGGTCCCGAT
GGCATGCAGCCGACGAAGTTGTTGCGCCACTCGTCATCTGGCGCACTCTT
GCCTTTGAAGAGGTTCAGGGTAAGTGCATCTCCAGCGACCGGACTTGTGG
GCATGCAGGAGAGCGTATTCCTCAGTAATTTCTTCGGCTGCGTGGGCTTC
GTGCCACTCACCACCCCAAGGTTCAGGGTAAGTGCATCTCCAGCGACCGG
ACTTGTGGGCATGCAGGAGAGCGTATTCCTCAGTAATTTCTTCGGCTGCG
TGGGCTTCGTGCCACTCACCACCCCAAGCCACATCCGCGGAGAGATGGTG
AAGATGATGGCCAGCGACGCTGCCCAACACCAGCCTGGCGCTCCGCAAGA
CTTCCCCGAGCAAGGCCAGTTTGGCGCCGTCTTCACCGATGGTGGCATCA
CCACGGGAAGTCAGCTTTCGACGAGTCCCTCCGCTTGCACATTTTGGTGT
GCAGTTGGTGTGGGAGCTCTTGTGAAGGGAAGCCCCGTTGAATCGCCACA
TCCGCGGAGAGATGGTGAAGATGATGGCCAGCGACGCTGCCCAACACCAG
CCTGGCGCTCCGCAAGACTTCCCCGAGCAAGGCCAGTTTGGCGCCGTCTT
CACCGATGGTGGCATCACCACGGGAAGTCAGCTTTCGACGAGTCCCTCCG
CTTGCACATTTTGGTGTGCAGTTGGTGTGGGAGCTCTTGTGAAGGGAAGC
CCCGTTGAATCGGTTGCGAACTACTTCCGGCTGGCGAGAGGTGCACTGGA
CGCCTACACTGGCCCTGGGAATGCAGAGTTAGCAAAGTTGCGAACTACTT
CCGGCTGGCGAGAGGTGCACTGGACGCCTACACTGGCCCTGGGAATGCAG
AGTTAGCAAAGGCGCGGGCGATCCTGGGCTACTTCTACGGTTTCATGGGA
GACATGGGCGCGGGCGATCCTGGGCTACTTCTACGGTTTCATGGGAGACA
TGGCGAAGTTTGAAGAGTACCTGGAGCTTTCAGACTCTTTTTATACTTCT
TCCATCGAGCAAGGGTCAACTGACATGCTGCCAGCGGCGAAGTTTGAAGA
GTACCTGGAGCTTTCAGACTCTTTTTATACTTCTTCCATCGAGCAAGGGT
CAACTGACATGCTGCCAGCGGGATTCGCCGAGATGGTCCAACACAAGCAG
ACCGTTAAGGTGTACGCGGGCAAGGTAGACTTTACAGATATCGAGTCCTC
GGGCGCACAACGTCAACATTCTCCGCAGGGATTCGCCGAGATGGTCCAAC
ACAAGCAGACCGTTAAGGTGTACGCGGGCAAGGTAGACTTTACAGATATC
GAGTCCTCGGGCGCACAACGTCAACATTCTCCGCAGATCAACCCGGCTGT
AAGCGAAGGGGACGTATATATGTATGTTATCCAGTCGCTTGTGGCGCTCG
AGCAAGTTGTATTCGGGAAAGCTTGCAGAAAGATGGCGACTCGCGGACAA
TTGAGCGATGATGAGCCTCGCTTGGAGAACAGCGGAGGTGTAAGCCCGCA
CGGTAACGTCCCCCAGGTGGAAGAGGTGTCAGAGGCTATAGCTGCCGGGT
TGAAAGATGGCCTGGTCGACTTCGGACAGCTTCAAGAAACTTTCGATCGA
TCAACCCGGCTGTAAGCGAAGGGGACGTATATATGTATGTTATCCAGTCG
CTTGTGGCGCTCGAGCAAGTTGTATTCGGGAAAGCTTGCAGAAAGATGGC
GACTCGCGGACAATTGAGCGATGATGAGCCTCGCTTGGAGAACAGCGGAG
GTGTAAGCCCGCACGGTAACGTCCCCCAGGTGGAAGAGGTGTCAGAGGCT
ATAGCTGCCGGGTTGAAAGATGGCCTGGTCGACTTCGGACAGCTTCAAGA
AACTTTCGATCGACCAAACATTCGCACGGGTATCGTCGGCCTCGTCATTA
ACACACCAAACATTCGCACGGGTATCGTCGGCCTCGTCATTAACACGACC
CTGACATTCCAAAATGCAGTGAGCGGGGACGCTTATGGGACTTTGGAGAG
GTTGGGGTATTGCGTCGAGGTATTCGAGCGGTACCCTGGCGTGTGTGGCT
GCACGATGCAGTGGACCCTGACATTCCAAAATGCAGTGAGCGGGGACGCT
TATGGGACTTTGGAGAGGTTGGGGTATTGCGTCGAGGTATTCGAGCGGTA
CCCTGGCGTGTGTGGCTGCACGATGCAGTGGGGTCACTTCGCACACAGTG
CCCTGGGGGCCCTAGCTGCGATTGACGACCCCAGAGCTCGAGGACTGTAC
AACCGGTTGCGGGACATCTACAATCCGTCTCGCCCCCCCACCTCTCTGCC
AGCGCCCCCGTTGGAGGAGTGGCGTGGGATATCTGCATTCTGCGATTATT
TCCAGTGCAGGGGTCACTTCGCACACAGTGCCCTGGGGGCCCTAGCTGCG
ATTGACGACCCCAGAGCTCGAGGACTGTACAACCGGTTGCGGGACATCTA
CAATCCGTCTCGCCCCCCCACCTCTCTGCCAGCGCCCCCGTTGGAGGAGT
GGCGTGGGATATCTGCATTCTGCGATTATTTCCAGTGCAGGATACATGAG
GGTCTCATCGCGAGTCAAGCCATGAGCGTTTTCTCCACCCCGCCCCACTC
CACTAGCAACTGCACCGGCTCACATCCTGAATGCGAGCAAGGCGATTCGC
AGGTTGTCCATGAGGAATATCATACTAGCAGCATTGGCTCGGTGGGTGCC
ACTCCCGAGAACGCGACTGGTTCCACCATTGTTGCCCCTTGCAGCACCGG
AGACAAACCAAAGGCATCTACTAGCTCGTGGGAACTGAACCAAGCGTCTA
CGCCACAAACAGGCCCACCGGACGGACCGAGCTTGTCTGCTTCACATCTC
CACTGTGAATTCGCCAGGGGAGGAGCAAGTGATACCGACGCTTACAGCGG
TGCGGTCGTTGAGTGTGGCGGTGGCGTCGATTCTGGCTTGGTAGGCCGAG
TCCCCGGTATGTCCGTGACATCGCCGTTGTTGGGAGACGTAGATGGGGCC
TCAGAGATGGGGGATGATACCATTGCCGCGGCAGACTGGCTGGATGTTAC
CCATGGCATGTTGGATGCAACGGATGACAAGAATTCCGTTATTTGAGATA
CATGAGGGTCTCATCGCGAGTCAAGCCATGAGCGTTTTCTCCACCCCGCC
CCACTCCACTAGCAACTGCACCGGCTCACATCCTGAATGCGAGCAAGGCG
ATTCGCAGGTTGTCCATGAGGAATATCATACTAGCAGCATTGGCTCGGTG
GGTGCCACTCCCGAGAACGCGACTGGTTCCACCATTGTTGCCCCTTGCAG
CACCGGAGACAAACCAAAGGCATCTACTAGCTCGTGGGAACTGAACCAAG
CGTCTACGCCACAAACAGGCCCACCGGACGGACCGAGCTTGTCTGCTTCA
CATCTCCACTGTGAATTCGCCAGGGGAGGAGCAAGTGATACCGACGCTTA
CAGCGGTGCGGTCGTTGAGTGTGGCGGTGGCGTCGATTCTGGCTTGGTAG
GCCGAGTCCCCGGTATGTCCGTGACATCGCCGTTGTTGGGAGACGTAGAT
GGGGCCTCAGAGATGGGGGATGATACCATTGCCGCGGCAGACTGGCTGGA
TGTTACCCATGGCATGTTGGATGCAACGGATGACAAGAATTCCGTTATTT
GA
back to top