mRNA_E-fasciculatus_F_contig12243.1736.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: D7G5L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L0_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 7.520e-142 Identity = 200/205 (97.56%), Postives = 202/205 (98.54%), Query Frame = 2
Query: 2 GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVIRGNPRLWEDVGAL 616
GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQ FPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALK TRREIMHVACGNNCTLVLAGGVAFPTLFEMTASV+RGNPRLWEDV +L
Sbjct: 448 GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVVRGNPRLWEDVESL 652
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: A0A6H5JJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV9_9PHAE) HSP 1 Score: 424 bits (1089), Expect = 3.280e-139 Identity = 201/205 (98.05%), Postives = 204/205 (99.51%), Query Frame = 2
Query: 2 GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVIRGNPRLWEDVGAL 616
GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQ FPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTA+V+RGNPRLWEDVG+L
Sbjct: 835 GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTAAVVRGNPRLWEDVGSL 1039
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: F0Y909_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y909_AURAN) HSP 1 Score: 257 bits (657), Expect = 3.830e-82 Identity = 120/203 (59.11%), Postives = 151/203 (74.38%), Query Frame = 2
Query: 8 VYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVIRGNPRLWEDVGAL 616
VY WGHNRV QLG N+ VPRN EGA+F+P P+ V+S+ G+ + +VVAGWGH+A LT +G YVCGRN+QGQLGLG P+ FP NERGHP+Q DF L+DRL ++ QIACGGEHSVA+ E+GEV S GAG KGQLGH + E FPR+V LK +RR+++ VACGNN TLVL G P+LF+ A VI +P ++DV A+
Sbjct: 134 VYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLEVACGNNGTLVLCGYFNPPSLFDCCAEVICADPDRFDDVDAI 336
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: A0A7S2FHZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHZ6_9STRA) HSP 1 Score: 261 bits (666), Expect = 1.730e-79 Identity = 122/199 (61.31%), Postives = 149/199 (74.87%), Query Frame = 2
Query: 8 VYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVIRGNPRLWED 604
VY WGHNRV QLG NS PRN+EGA+FLP+P+ V SL +N+ +VVAGWGHSAALTV G++ +CGRN+QGQLGLG PQDFP+NERGHP+QA F +D+L K+ QIACGGEHSVA+ E G+V++FGAG KGQLGH E FP L+ LK+TRR++ VACGNNCTL+LAG P+L + VIR P L E
Sbjct: 530 VYTWGHNRVGQLGYSNS-DAPRNVEGAHFLPTPKKVASLQKLNVRQVVAGWGHSAALTVSGEVLICGRNFQGQLGLGDPQDFPKNERGHPYQAQFITLDKLDGQKVIQIACGGEHSVALTECGDVYTFGAGNKGQLGHGGLANEHFPALLTDLKKTRRDVHQVACGNNCTLILAGYFNPPSLLQRCTEVIRSTPALMES 727
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: A0A7S4E565_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E565_9STRA) HSP 1 Score: 252 bits (644), Expect = 5.580e-77 Identity = 117/190 (61.58%), Postives = 141/190 (74.21%), Query Frame = 2
Query: 8 VYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVI 577
VY WGHNRV QLG N VPRN EGA+F+P P+ VES+ G+ + +VVAGWGH+A LT DG YVCGRN+QGQLGLG P+ FP NERGHP+Q DF L++ L ++ Q+ACGGEHSVA+ +GEV+S GAG KGQLGH S E FPRLV LK TRR+++ VACGNN TLVL G PTLF+ A V+
Sbjct: 434 VYTWGHNRVGQLGYANEDVVPRNGEGAHFVPRPRRVESVAGLRVRRVVAGWGHTALLTADGACYVCGRNFQGQLGLGDPEAFPHNERGHPYQPDFRLVETLARKRVAQVACGGEHSVALTADGEVYSCGAGNKGQLGHGSGENEQFPRLVARLKATRRDVLEVACGNNGTLVLCGYFEPPTLFDRCAEVL 623
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: A0A7S2HV15_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV15_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.760e-73 Identity = 126/207 (60.87%), Postives = 154/207 (74.40%), Query Frame = 2
Query: 5 QVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVA--ENG-EVWSFGAGQKGQLGHEST-TREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVIRGNPRLWEDVGA 613
+V+ WGHNRV QLG NS PRN+EGA+FLP+P+ V SL I +VVAGWGHSA LTV G++ +CGRNYQGQLGLGSP++F +NERGHPFQA F ++DRL ++ QIACGGEH+VA+ ENG +V+SFGAG KGQLGH + E+FPRLV LKRTRR I VACGNNCT++LAG P+LF+ VIRG P L + A
Sbjct: 458 EVFTWGHNRVGQLGYSNS-DAPRNVEGAHFLPTPKRVMSL-HHTIRQVVAGWGHSAVLTVSGEVLICGRNYQGQLGLGSPEEFQKNERGHPFQAKFEVLDRLDGDRVAQIACGGEHTVALCKEENGSKVFSFGAGNKGQLGHGTPLANENFPRLVIDLKRTRRNIHQVACGNNCTVILAGTFNPPSLFDRAIEVIRGTPGLMGSLDA 662
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: A0A7S1XMC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC2_9STRA) HSP 1 Score: 236 bits (603), Expect = 9.290e-72 Identity = 104/197 (52.79%), Postives = 138/197 (70.05%), Query Frame = 2
Query: 8 VYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVIRGNPRLW 598
V+ WGHNRV QLG GNS RN +GAYF+P PQ V L G+ + VVAGWGHSA LT G++Y+CGRN+QGQLGLGSP FP NERGHPFQ+ F + L HL+++Q++CGGEHSV + EV++FG G +GQLGH + E++PR ++ + RT R+++H ACGNN TL+L G +L+ + IR N L+
Sbjct: 265 VFTWGHNRVGQLGYGNSSRARRNTDGAYFIPVPQRVTCLDGVEVTDVVAGWGHSAVLTAAGEVYICGRNFQGQLGLGSPDKFPLNERGHPFQSVFVRLHTLGHLRVRQVSCGGEHSVCIDGRNEVYTFGLGAQGQLGHTDSESENYPRRLEVMLRTHRQVLHAACGNNSTLLLTGPTVIRSLYHLCIDAIRKNEVLY 461
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: W7TK43_9STRA (Regulator of chromosome condensation-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK43_9STRA) HSP 1 Score: 227 bits (579), Expect = 3.700e-69 Identity = 110/209 (52.63%), Postives = 142/209 (67.94%), Query Frame = 2
Query: 2 GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVG----MNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQ---HLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVIRGNPRLWEDV 607
G+VY WGHNRV QLG N+ VPRN EGA+FLP+P+ V++L G + I KV+AGWGHSA + +G +Y+CGRN+QGQLGLG P++F +NER HP+ A F +I LQ K+KQ ACGGEHS A+ N EV++FGAG +GQLGH + E +PRL Q ++ TRR I VACGNNCT++L G P L E I N L+ +
Sbjct: 185 GEVYTWGHNRVGQLGYTNNEEVPRNNEGAHFLPTPRRVKTLAGGGPPLRIQKVIAGWGHSAVVCGNGDVYICGRNFQGQLGLGDPKNFERNERNHPYLAHFRVITDLQTGGQQKVKQFACGGEHSAALLNNDEVYTFGAGARGQLGHGDSRNEAYPRLNQTMRATRRVIKDVACGNNCTVMLVGAHRIPPLTEYCLEFITQNWSLYRHI 393
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: A0A7S3YFB6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFB6_HETAK) HSP 1 Score: 199 bits (505), Expect = 5.750e-62 Identity = 86/140 (61.43%), Postives = 110/140 (78.57%), Query Frame = 2
Query: 2 GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGH 421
G+VY WGHNRV QLG+ NS VPRN EGA+FLP PQ V+SL+G+++V+V+AGWGH+A LT G++ VCGRNY+GQLGLG P FP NERGHP+Q F ++ L + Q+ACGGEHS A+ +GEV++FGAG +GQLGH
Sbjct: 13 GEVYTWGHNRVGQLGVSNSAGVPRNGEGAHFLPRPQRVDSLLGLDVVEVIAGWGHTAVLTRAGRVLVCGRNYRGQLGLGDPAGFPHNERGHPYQPTFAALEALDRRAVAQVACGGEHSAALLRSGEVYTFGAGHRGQLGH 152
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Match: A0A835Z9L6_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L6_9STRA) HSP 1 Score: 212 bits (540), Expect = 2.540e-61 Identity = 103/184 (55.98%), Postives = 125/184 (67.93%), Query Frame = 2
Query: 2 GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQDFPQNERGHPFQADFCLIDRLQHLKI-----------KQIACGGEHSVAVAENGE-VWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCT 517
G VY WGHNRV QLG GNS P+N+EGA+F P PQ V +L +V VVAGWGHSAALT GQLY+CGRNY+GQLGLG P F QNERGH +QA F ++ L + ++ QI+CGGEHS + + G ++SFGAG KGQLGH + E PR V+AL T R ++HVACGNNCT
Sbjct: 491 GTVYTWGHNRVGQLGYGNSEVAPKNVEGAFFQPLPQEVTTLRDKGVVAVVAGWGHSAALTASGQLYICGRNYKGQLGLGDPVLFQQNERGHHYQAHFQQLEDLSYERVTQAVLCYAAHTSQISCGGEHSAVITQGGSTIYSFGAGHKGQLGHGNCMNEYRPRRVEALMSTHRTLLHVACGNNCT 674 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12243.1736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12243.1736.1 >prot_E-fasciculatus_F_contig12243.1736.1 ID=prot_E-fasciculatus_F_contig12243.1736.1|Name=mRNA_E-fasciculatus_F_contig12243.1736.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=145bp GPSVRVGSQPSRSARHRKLLHRAAEHGGSLLPAKPSAGGVSCGHEHREGSback to top mRNA from alignment at E-fasciculatus_F_contig12243:416..3882- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12243.1736.1 ID=mRNA_E-fasciculatus_F_contig12243.1736.1|Name=mRNA_E-fasciculatus_F_contig12243.1736.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3467bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12243:416..3882- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12243:416..3882- >mRNA_E-fasciculatus_F_contig12243.1736.1 ID=mRNA_E-fasciculatus_F_contig12243.1736.1|Name=mRNA_E-fasciculatus_F_contig12243.1736.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=870bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12243:416..3882- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |