mRNA_E-fasciculatus_F_contig122.1709.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig122.1709.1
Unique NamemRNA_E-fasciculatus_F_contig122.1709.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: A0A6H5JTR4_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTR4_9PHAE)

HSP 1 Score: 1169 bits (3024), Expect = 0.000e+0
Identity = 662/758 (87.34%), Postives = 680/758 (89.71%), Query Frame = 1
Query:   64 LFYAASGMQGWRASMEDAHIALLKVPHGQPPTSAAIGAARIGLFSSQSHKPPLRSSGSRGSIITAVGDSNGPSASGAQAARRRAETFSAGDTGGLSQQGRPKDETGSQQTAAISGDGPRRASTGAVKGRSGFPAASDGSGGXXXXXXXVGAGWKAVDLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLTSGEGQEKTGGWGGATKVDGIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAGRVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVLLDGWEGALATKAYTPALTFSGGRIGSVGEAAAAMSATLPKMPRPLNNARPPLPAEFRAAMSAGTTAPAPKSESDPQAAQEAGAANREKLAAPARETGPSGDGNASQGNATVGATDSGATMGWTQRRIAAGKVAPPRTAHGIEFALASFSAPFVAKAPAAGSRMSTGSINSRGVVTAATGASATAGDLATSAVAKQRNASRASXXXXXXXXXXXXXXXXXSATAPMLPSPLWXXXXXXXXXXXXXXXXXXXXXVLAEVGAAXXXXXSALAEENAAPPCPNSSANGRTGGMAEVGPTGEVCCRGKAGEEPGRQAPPSEDAGLVFVPVEPSVTPSEVTITATASPHHPT 2337
            L++ AS  QGWRASMEDAHIALLKVPHGQPPTSAAIGAARIGLF++ SHKPPLRSSGSRGS+ITAVGDSNGPSASGAQAARRRAETFSAGDTGGLSQQGR KDETGSQQTAAIS +GPRR STGAVKGR+GF AAS     XX     VGAGWKAVDLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALL SGEGQEKTGGWGGATKVDGIGVGCTIVTALLDRKR QCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARI+AAGGHVSRAGRVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNT Q       GLR+GSAPREVCESLLDACLSPDPKGTRYAGCDNMTV+LVLLDGWEGALATKAYTPALTFSGGRIGSVGEAAAAMSATLPK+PRPL NARPPLPAEFRAAMS GTTAPAPKSES+ QAA+EAGAANREK AAPA ET P G GNASQ NATVGAT+S   MGWTQRRIAAGKVAPPRTAHGIEFALASFSAP VAKAPAAGSRMSTGSIN RGVVTAATGA+A AGDLATSAVAKQRNASRAS       XXXXX     SATAPMLPSPLW XXXXXXXXXXXXXXXXX   VLAEVGAA     SALAEE AAP C N SANG+  GMAEV  T EVC +GKAGEE GRQA PSED GLVFVPVEPS TPSEVT+TATASPHHPT
Sbjct:   14 LYFWAS--QGWRASMEDAHIALLKVPHGQPPTSAAIGAARIGLFNNHSHKPPLRSSGSRGSVITAVGDSNGPSASGAQAARRRAETFSAGDTGGLSQQGRLKDETGSQQTAAISREGPRRGSTGAVKGRTGFAAASXXXXXXXDGSSSVGAGWKAVDLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLKSGEGQEKTGGWGGATKVDGIGVGCTIVTALLDRKRRQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIMAAGGHVSRAGRVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTAQ-------GLRAGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVVLVLLDGWEGALATKAYTPALTFSGGRIGSVGEAAAAMSATLPKLPRPLRNARPPLPAEFRAAMSNGTTAPAPKSESESQAAEEAGAANREKPAAPAPETEPPGHGNASQQNATVGATESAGKMGWTQRRIAAGKVAPPRTAHGIEFALASFSAPIVAKAPAAGSRMSTGSINRRGVVTAATGATAAAGDLATSAVAKQRNASRASSSSVPPNXXXXXSNHPRSATAPMLPSPLWHXXXXXXXXXXXXXXXXXIA-VLAEVGAAGAVAASALAEETAAPSCQNPSANGKPSGMAEVDSTAEVCGQGKAGEESGRQASPSEDTGLVFVPVEPSATPSEVTVTATASPHHPT 761          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: A0A2P6VJ19_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VJ19_9CHLO)

HSP 1 Score: 229 bits (583), Expect = 7.390e-64
Identity = 131/309 (42.39%), Postives = 171/309 (55.34%), Query Frame = 1
Query:  526 AVDLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLTSGEG----------------------------------QEKTGGWGGATKV--DGIGVG----------CTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAG---RVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVLLD 1305
            A+ + +D  LFGVFDGHGG  VA FC +R+P  L A    + G + +    V+H +D L+ S EG                                  Q   G  GGA +   +G G G          CT V AL+   R   YVA+AGDSR VLCR  +A+ ++ DHKP  P E ARI+AAGG +S  G   RVN NLNLSRAIGD+ YK N   +PKDQII+AEPD+ +  +TP  D FL+LACDG+W++M   QVV FV   L  G  P+++   LL+ACL+ DP+  R  GCDNMT  +V+ +
Sbjct:   43 ALHMSDDCHLFGVFDGHGGPEVAKFCSKRMPTELQACSGFKEGRFEECLKEVFHRMDELMRSREGFTDLEALRRECEGGKDGEGEGEDTYDMLRKLVQLQRMAGQNGGAAQEGKEGAGAGLQPEVTVQAGCTAVVALI--VRDMLYVANAGDSRAVLCRGSKALPMSEDHKPAAPDERARIMAAGGFLSEIGGITRVNGNLNLSRAIGDLRYKMNSELEPKDQIITAEPDIMQQQLTPD-DRFLVLACDGIWDVMTNQQVVDFVAQRLAQGQQPQDISSELLNACLASDPREARGIGCDNMTAAIVVFE 348          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: E1ZRL9_CHLVA (Protein-serine/threonine phosphatase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZRL9_CHLVA)

HSP 1 Score: 224 bits (572), Expect = 3.540e-62
Identity = 133/322 (41.30%), Postives = 169/322 (52.48%), Query Frame = 1
Query:  526 AVDLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLTSGEG--------QEKTGGWGGATKVDG----------------------------------------------------IGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAG---RVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVLL 1302
            A  L +D  +FGVFDGHGG  VA FC  R+P  L   P  + G + +   +V+H +D ++ S EG        +E  GG  G  + +                                                     +  GCT V AL+   R   YVA+AGDSR VLCR GRA+ ++ DHKP  P E ARI+AAGG +S  G   RVN NLNLSRAIGD+ YK N   +PKDQII+AEPDV    +TP  D FL+LACDG+W++M   QVV FV   L  G+ P EV   LL+ACL+ DP+  R  GCDNMT  +V+L
Sbjct:   42 AEHLRDDCHIFGVFDGHGGPEVARFCSRRMPTELLRQPAFQDGRYEESLKQVFHRMDEMMRSREGFTELEALRKEVEGGKDGEAEEEDTYDMLRKLVHMQRMAGQQAQAXXXXXXXXXXXXXXANGQAAAPESTLQPEVTVQAGCTAVVALIMGDR--LYVANAGDSRAVLCRGGRALAMSEDHKPAAPDERARIMAAGGFLSEIGGITRVNGNLNLSRAIGDLRYKMNSELEPKDQIITAEPDVTSARLTPE-DAFLVLACDGIWDVMTNQQVVDFVAPRLAGGAPPHEVASELLNACLANDPREARGIGCDNMTAAIVVL 360          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: A0A2P6U558_CHLSO (Protein-serine/threonine phosphatase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U558_CHLSO)

HSP 1 Score: 234 bits (596), Expect = 4.490e-62
Identity = 137/313 (43.77%), Postives = 172/313 (54.95%), Query Frame = 1
Query:  526 AVDLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLTSGEG----------------------------------QEKTGGWGGATKVD----------GIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAG---RVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVLLDGWEGAL 1323
            A  L +D  +FGVFDGHGG  VA FC  R+P  L   P   AG + +   +V+H +D L+ S EG                                  Q  TGG  G  K             I  GCT V AL+     Q YVA+AGDSR VLCR G+AV ++ DHKP  P E ARI+AAGG +S  G   RVN NLNLSRAIGD+ YK N+  +PKDQII+AEPDV    +T   D FL+LACDG+W++M+  QVV FV   L  G APR++   LL++CL+ DP+  R  GCDNMT  +V+ +   G L
Sbjct:  467 AEHLSDDCHIFGVFDGHGGPEVALFCSRRMPLELKRHPAFAAGAFEESLKQVFHRMDELMRSREGFTELEVLRRECEGGKEPDGNEEDTYDMLRKLVQLQRMTGGQQGEGKGSMDEPALQPEITIQAGCTAVVALI--VHDQLYVANAGDSRAVLCRGGKAVPMSEDHKPAQPDERARIMAAGGFLSEIGGITRVNGNLNLSRAIGDLRYKMNNELEPKDQIITAEPDVLTQRLTRD-DSFLVLACDGIWDVMDNQQVVDFVHQRLAKGIAPRDIASELLNSCLANDPREARGIGCDNMTAAIVVFEPSSGPL 776          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: A0A059LPQ0_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LPQ0_9CHLO)

HSP 1 Score: 213 bits (541), Expect = 6.070e-59
Identity = 128/292 (43.84%), Postives = 159/292 (54.45%), Query Frame = 1
Query:  541 EDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLTSGEGQ------------------------------------EKTGGWGGATKVDGIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAG---RVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVL 1299
            +D  +FGVFDGHGG  VA FC + +   L +S D   GN+      V+H +D L+ S EG                                     ++ GG G A  V  I  GCT V AL+  ++   +VA+AGDSR VLCR G AV L+ DHKP    E ARI AAGG VS  G   RVN NLNLSRAIGD+ YK N     KDQIISAEPDV R +     D F +LACDG+W++M+   VV FV   LR G AP +    LLDAC++ DP+  R  GCDNMT  +++
Sbjct:   34 DDTYIFGVFDGHGGAEVAHFCAKFIQQELTSSADFAKGNYESALINVFHRMDDLMRSAEGATELESIRRSVEKDASGAGPGDDTYAVLRRLMALQRLQQGGGEGPAEPV--IQAGCTAVVALVRGRK--LFVANAGDSRAVLCRRGEAVALSVDHKPSTAEERARIQAAGGFVSDVGGITRVNGNLNLSRAIGDLRYKANASLLAKDQIISAEPDV-RVVELCEDDAFAVLACDGIWDVMDNQTVVGFVSERLRKGLAPADAAAQLLDACMAADPREARGIGCDNMTASVIV 320          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: A0A2J8AE65_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AE65_9CHLO)

HSP 1 Score: 207 bits (526), Expect = 1.930e-56
Identity = 122/308 (39.61%), Postives = 161/308 (52.27%), Query Frame = 1
Query:  550 ALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALL-------------TSGEGQEKTGGWGGATKVDGIGV-----------------------------------------GCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAG---RVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVLL 1302
            A+FGVFDGHGG  VA FC++ +   L  + +   G+  D   +V+H +D +L             T    +E   G GG +  D + +                                         GCT V A+  +   + YVA+AGDSR VLCR G+AV L+ DHKP    E  RI+AAGG +S  G   RVN NLNLSRAIGD+ YK N     KDQIISA+PD+ R  ++P  D F +LACDGVW++M+    + FV + L  G  P +   +LLDACL+ DPK  R  GCDNMTV++V L
Sbjct:   53 AVFGVFDGHGGAEVAKFCQKYMTLELQRTEEFSKGSVEDSLIKVFHRMDEMLRDQRYAEELEKLKTKEAAEEDGEGEGGVSTTDALDLLRRVFQLKRFVGGNSANAAPAEGGSGEAEAAESPEEELVQAGCTAVVAV--KLGSELYVANAGDSRGVLCRGGKAVALSEDHKPAQEGERNRIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNVELPAKDQIISAQPDIRRITLSPTEDRFFLLACDGVWDVMSNQDAIDFVGAKLEQGMTPSQASCALLDACLASDPKEARGVGCDNMTVVIVQL 358          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: A0A7R9V4D4_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V4D4_9CHLO)

HSP 1 Score: 207 bits (526), Expect = 4.680e-56
Identity = 138/337 (40.95%), Postives = 171/337 (50.74%), Query Frame = 1
Query:  526 AVDLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLTSG------------EGQEKTGGWGG---------------------------------ATKVDGIGV---------------GCTIVTALLDRKRGQ-CYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAG---RVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVLL----DGWEGALATK 1332
            AVD      LFGVFDGHGG  VA FC+  L   +    +   G+  D   RV+H +D +L               EG ++ GG  G                                 A    G G                GCT V A+   KRG   YVA+AGDSR VL RAG+A+ L+ DHKP    E ARI+AAGG +S  G   RVN NLNLSRAIGD+ YK N    PKDQII+AEPDV +  +T   D F +LACDGVW++M+   VV FV   L  G +P E+  ++LDACL+ DPK  R  GCDNMT ++VLL     G E  L+T+
Sbjct:   45 AVDA--QTCLFGVFDGHGGAEVAKFCQRYLLQEIKLLKEFDEGSMEDSMVRVFHRMDEMLRDSQYSKEIEQLKIREGSDEDGGEDGDGNGTMDALDMLKRVFQLKNHYMGDGKAVSERGAEAASGSGTRPEKPVDPEEALVQAGCTAVVAV---KRGSDLYVANAGDSRGVLGRAGKAIALSEDHKPAHEVERARIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLRYKGNMGLPPKDQIITAEPDVVKLTLTDE-DRFFVLACDGVWDVMSNQDVVDFVEQRLDKGMSPSEISCAILDACLASDPKEARGVGCDNMTAIVVLLKDTGSGMEPMLSTQ 375          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: D8U724_VOLCA (Protein-serine/threonine phosphatase n=9 Tax=Chlamydomonadales TaxID=3042 RepID=D8U724_VOLCA)

HSP 1 Score: 202 bits (514), Expect = 7.240e-55
Identity = 125/297 (42.09%), Postives = 159/297 (53.54%), Query Frame = 1
Query:  544 DAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLT------------SGEGQEKTG------------------GWGGATKVDG---------IGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAG---RVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVLLDG 1308
            + A+FGVFDGHGG  VA FC++ +   L    D   G+  D    V+H +D +L             S E  E  G                  G GG+ + +          +  GCT V A+  +     YVA+AGDSR VL RAG+AV L+ DHKP    E  RI+AAGG +S  G   RVN NLNLSRAIGD+ YK N     KDQII+A+PD+ +  + P  D F ILACDGVW++M     V FV + L  G  P +   +LLDACL+ DPK  R  GCDNMTV++V L G
Sbjct:   51 NVAVFGVFDGHGGAEVAKFCQKYMATELQRLEDFGKGSVEDSLITVFHRMDEMLRDQRYAEELEKLKSKEANEDDGDGEGVFQLKRFVGNSSNMGEGGSGQAEESSESPEEELVQAGCTAVVAV--KFGSDLYVANAGDSRGVLSRAGKAVPLSEDHKPAQEGERTRIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNTDLPAKDQIITAQPDIRKVTLLPE-DRFFILACDGVWDVMTNQDAVDFVGARLDQGMTPSQAACALLDACLASDPKEARGVGCDNMTVVVVQLQG 344          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: I0YIS0_COCSC (Protein-serine/threonine phosphatase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIS0_COCSC)

HSP 1 Score: 199 bits (505), Expect = 4.830e-53
Identity = 127/327 (38.84%), Postives = 168/327 (51.38%), Query Frame = 1
Query:  529 VDL--LEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALL--------------TSGEGQEKTGGWGGAT-----------------------------------KVDGIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAG---RVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLVLLDGWEGALATKAYTPA 1347
            VDL    DAA+FGVFDGHGG  VA FC++ L   +        GN  D    V+H +D++L              ++ + Q +      +T                                   +V  +  GCT V A+L  K  + +VA+AGDSR VLCR G+A+ L+ DHKP    E  RI AAGG VS  G   RVN NLNLSRAIGD+ YK N    P +QII+A+PD+ +  +    D F +LACDGVW++M+  +VV FV   L  G A  ++   LLDACL+PDP+ TR  GCDNMT  +V+L+    A       PA
Sbjct:   45 VDLGNAPDAAIFGVFDGHGGSEVAKFCQKYLAEEITRLEKYHEGNLPDSLVEVFHKMDSMLKDSAYGAELEALRRSTHDAQPQPDDSQVSTSEALDMLRQVLPTSSCSPPPRLLSMFNSPLPARCIRVRCVQAGCTAVVAVL--KGQELWVANAGDSRAVLCRGGQALALSEDHKPQSEGERNRITAAGGFVSDVGGVSRVNGNLNLSRAIGDLKYKGNDQLAPAEQIITAQPDIVKIELRHE-DRFFVLACDGVWDVMSNQEVVQFVSVCLDRGMALPDIASQLLDACLAPDPRETRGIGCDNMTACIVVLNRDAPAAVLPKLAPA 368          
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Match: A0A812U3R4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812U3R4_9DINO)

HSP 1 Score: 198 bits (503), Expect = 6.950e-53
Identity = 112/256 (43.75%), Postives = 148/256 (57.81%), Query Frame = 1
Query:  532 DLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLTSGEGQEKTGGWGGATKVDGIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHKPGMPSEYARIVAAGGHVSRAGRVNDNLNLSRAIGDMVYKRNHLRQPKDQIISAEPDV-CRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAPREVCESLLDACLSPDPKGTRYAGCDNMTVLLV 1296
            DL    AL+GVFDGHGG AVA+   ERLP +L   P+   G +++   + +   D  L S  G+ +    G A+    +G G T V ALL R   + YVA+ GDSR VL     AV L+RDH P  P E  RI+ AGG V+R GR+N +LNLSRAIGD+ YK+N    P+ Q+IS  P+V CR L+    D +L+L CDGVWE      +V F+   L + S   + C   LD+ +S +P  T   GCDNMT+L V
Sbjct:   19 DLPRGLALYGVFDGHGGSAVAEIVAERLPQILRQRPEYARGEYQEALKQAFLEQDDFLRSQAGRARLKRSGMASA---LGTGTTAVVALLCRASLRLYVANCGDSRAVLVSGAGAVALSRDHSPTDPEERKRILRAGGKVNREGRINGDLNLSRAIGDLFYKKNLKLAPEAQLISPLPEVRCRQLIER--DRYLLLGCDGVWERFTNQHIVDFLLQRLPTSSCISQACAEFLDSNISKNPMRTSGLGCDNMTLLCV 269          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig122.1709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTR4_9PHAE0.000e+087.34PPM-type phosphatase domain-containing protein n=2... [more]
A0A2P6VJ19_9CHLO7.390e-6442.39Protein-serine/threonine phosphatase n=1 Tax=Micra... [more]
E1ZRL9_CHLVA3.540e-6241.30Protein-serine/threonine phosphatase n=1 Tax=Chlor... [more]
A0A2P6U558_CHLSO4.490e-6243.77Protein-serine/threonine phosphatase n=1 Tax=Chlor... [more]
A0A059LPQ0_9CHLO6.070e-5943.84Protein-serine/threonine phosphatase n=1 Tax=Helic... [more]
A0A2J8AE65_9CHLO1.930e-5639.61Protein-serine/threonine phosphatase n=1 Tax=Tetra... [more]
A0A7R9V4D4_9CHLO4.680e-5640.95Protein-serine/threonine phosphatase n=1 Tax=Chlam... [more]
D8U724_VOLCA7.240e-5542.09Protein-serine/threonine phosphatase n=9 Tax=Chlam... [more]
I0YIS0_COCSC4.830e-5338.84Protein-serine/threonine phosphatase n=1 Tax=Cocco... [more]
A0A812U3R4_9DINO6.950e-5343.75Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig122contigE-fasciculatus_F_contig122:19604..27317 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1265.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FSC8
KEGG koko:K01090,ko:K01265,ko:K04457,ko:K14803,ko:K17499,ko:K19705
KEGG Pathwayko04010,map04010
EggNOG free text desc.protein serine/threonine phosphatase activity
EggNOG OGsCOG0631@1,KOG0698@2759
EC3.1.3.16,3.4.11.18
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein phosphatase 2C (PP2C)-like domain
Ec32 orthologEc-20_005030.1
Exons7
Model size2340
Cds size2340
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927729.0061898-CDS-E-fasciculatus_F_contig122:19603..207871622927729.0061898-CDS-E-fasciculatus_F_contig122:19603..20787Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 19604..20787 -
1695995668.9944057-CDS-E-fasciculatus_F_contig122:19603..207871695995668.9944057-CDS-E-fasciculatus_F_contig122:19603..20787Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 19604..20787 -
1622927729.0232987-CDS-E-fasciculatus_F_contig122:21226..213061622927729.0232987-CDS-E-fasciculatus_F_contig122:21226..21306Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 21227..21306 -
1695995669.0063746-CDS-E-fasciculatus_F_contig122:21226..213061695995669.0063746-CDS-E-fasciculatus_F_contig122:21226..21306Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 21227..21306 -
1622927729.0379765-CDS-E-fasciculatus_F_contig122:21746..218891622927729.0379765-CDS-E-fasciculatus_F_contig122:21746..21889Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 21747..21889 -
1695995669.0144694-CDS-E-fasciculatus_F_contig122:21746..218891695995669.0144694-CDS-E-fasciculatus_F_contig122:21746..21889Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 21747..21889 -
1622927729.0571468-CDS-E-fasciculatus_F_contig122:22761..228751622927729.0571468-CDS-E-fasciculatus_F_contig122:22761..22875Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 22762..22875 -
1695995669.0226276-CDS-E-fasciculatus_F_contig122:22761..228751695995669.0226276-CDS-E-fasciculatus_F_contig122:22761..22875Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 22762..22875 -
1622927729.0712821-CDS-E-fasciculatus_F_contig122:23150..233501622927729.0712821-CDS-E-fasciculatus_F_contig122:23150..23350Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 23151..23350 -
1695995669.032042-CDS-E-fasciculatus_F_contig122:23150..233501695995669.032042-CDS-E-fasciculatus_F_contig122:23150..23350Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 23151..23350 -
1622927729.0853934-CDS-E-fasciculatus_F_contig122:24564..250931622927729.0853934-CDS-E-fasciculatus_F_contig122:24564..25093Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 24565..25093 -
1695995669.0497427-CDS-E-fasciculatus_F_contig122:24564..250931695995669.0497427-CDS-E-fasciculatus_F_contig122:24564..25093Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 24565..25093 -
1622927729.100913-CDS-E-fasciculatus_F_contig122:27227..273171622927729.100913-CDS-E-fasciculatus_F_contig122:27227..27317Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 27228..27317 -
1695995669.0599737-CDS-E-fasciculatus_F_contig122:27227..273171695995669.0599737-CDS-E-fasciculatus_F_contig122:27227..27317Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig122 27228..27317 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig122.1709.1prot_E-fasciculatus_F_contig122.1709.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig122 19604..27317 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig122.1709.1

>prot_E-fasciculatus_F_contig122.1709.1 ID=prot_E-fasciculatus_F_contig122.1709.1|Name=mRNA_E-fasciculatus_F_contig122.1709.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=780bp
MGGYSSTPRKGKTSEEEGDESLFYAASGMQGWRASMEDAHIALLKVPHGQ
PPTSAAIGAARIGLFSSQSHKPPLRSSGSRGSIITAVGDSNGPSASGAQA
ARRRAETFSAGDTGGLSQQGRPKDETGSQQTAAISGDGPRRASTGAVKGR
SGFPAASDGSGGGGDGSGSVGAGWKAVDLLEDAALFGVFDGHGGKAVADF
CKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLTSGEGQEKTGGWGGA
TKVDGIGVGCTIVTALLDRKRGQCYVAHAGDSRCVLCRAGRAVQLTRDHK
PGMPSEYARIVAAGGHVSRAGRVNDNLNLSRAIGDMVYKRNHLRQPKDQI
ISAEPDVCRFLVTPGVDEFLILACDGVWEMMNTTQVVAFVRSGLRSGSAP
REVCESLLDACLSPDPKGTRYAGCDNMTVLLVLLDGWEGALATKAYTPAL
TFSGGRIGSVGEAAAAMSATLPKMPRPLNNARPPLPAEFRAAMSAGTTAP
APKSESDPQAAQEAGAANREKLAAPARETGPSGDGNASQGNATVGATDSG
ATMGWTQRRIAAGKVAPPRTAHGIEFALASFSAPFVAKAPAAGSRMSTGS
INSRGVVTAATGASATAGDLATSAVAKQRNASRASSSSVPPNARRRNNNH
LRSATAPMLPSPLWHHRQRREPPSEERIAAAAAVAVLAEVGAAGAVAASA
LAEENAAPPCPNSSANGRTGGMAEVGPTGEVCCRGKAGEEPGRQAPPSED
AGLVFVPVEPSVTPSEVTITATASPHHPT*
back to top

mRNA from alignment at E-fasciculatus_F_contig122:19604..27317-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig122.1709.1 ID=mRNA_E-fasciculatus_F_contig122.1709.1|Name=mRNA_E-fasciculatus_F_contig122.1709.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7714bp|location=Sequence derived from alignment at E-fasciculatus_F_contig122:19604..27317- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGTGGATATTCTAGCACGCCCCGAAAAGGGAAAACCTCGGAGGAAGA AGGAGACGAAAGCTTATTCTACGCTGCAAGTGGGATGCAAGTGAGTTCTA CGATAATAGTCTAAAGAGTCTGCGCGATTCTCCTGCTTGCGTGCTCTCTC TCTGTCTCTCTTCACCATCACACCAACAGCTGTTGGGCAGGATGTAGCAC CCTGCCAAGAGAGGATAACAACAAGCCGTGTGCTCTTCCACGAGCTTTGT CATATTTGTTCCGTTCGCATGTTCGCCCAATGCCAGACTACAGACATTCG CACACAGCACAAGGGCGCAACAAACAGATATGTAGTGTAGACTACAGCGG ACATCGTCGTTGCAAAGGGCTATTTTTAGGTCGCGCCGCAGGGCGCTTGC CTTCCAAACAGGAAACAGGACCTCAAGATGCAGAAATAAATGCCGCGTGC AGAGCAAAACTCAGGTATAATGTACTTTCGTCAAGCCGCAGACACCGAAA AGAGAAAGCGAAAAGAGAAAGCGAGGGCACAGCAGGCGTCTGGTTTTAGT CTAGCATATGCATAGGTGCCAGAAATAATTGGGCACGCAGGCTATTGTAG AGAGCAGCAGATTTCAGCAGTGGCCGATTGTGCACCACCGGGGCAGGTGA AGGTGTAGGGTAGGTCTTGCTTGCCGCAGTTGAGAGAGGGGGGGGATGTC ATCATGGACGCTGATGAGGTTTTCCGCTAGTGGATGCCAAAGCACCCTTT TGCGTCAGCACTAAATACTGAAATATTTTTCTTGGTTGGAAGTGTCGAAG TATTCGTATTACTTGTGACGACGATGTTGCTGATGTGCGTTGAATATTGA ATATGGAGGACGTTCAATAAACCAAAACACACCACGGAGCTGCGATCAGC AGGGCAACACACACGTGTTGCTCCACCATGAAAGAATCCGCGTTTATTTA ACATGTAGTAGAAAGTACAGGTTGTTTGCATCGAACAATTTTAATTTTTG TTTTGAATAATATCTGAGTGGCCATTCTAAATAGTACTACAGCAGTAGTC TAGTATGCATGGTACGGTCATCTCTAAAAATTTCAGTACAAGAGTGGCAT GTTTTCGCCCCATCCTTCATCGTTCACCGCAGTCAACAACCATGGTGGTC GTGAGCTCTCGTTGTGAGCTCGAATTTTGAGGCTCTACGGAAACACAAAC ATGGCGTGACAGCAGTTTTCTCGGAGAGATGTACTTGTAGCATGTAGCAG CGGACGCCTGGGACCACCAGCCAACGGGCTTGAATCTAGGCGTTGTGGCC CAGAATTCCTCCGTCTAAAGAAAAACCACAGGGCATTGTAAACAGCTTGC GGACGGGGGTTGCTTGTAAGACAGTCCTCTACTTTCGTGGCATGCCATGG TCTGTGCGTCTGTGGAAGGAGCACGAGGTACATAGTAGCTCAATTGTGCG AAGCAGGGTCCAAGTCGGAGGTGGTTGAAAAAGAGACTCACCTCTTGTAG AAAACAAAATTTGGTTTTTGTTCCGTGCTCTCCGGTCAGAAGCACATGCG GCAGCAACAAGGGCACAGCATCGTCGCAGCAAAAGTAGCGTGTAAAGCTT CAATATTTATACTGAAAGCACGCTGTCACCAACCGTTGGCGGAGGGAACA TCCTGTTACCAAAACTCCCCCCTTCGTGTGGGGAGGTTGTCAGCGATCTG TTTTTCTGTTCTGGCCATTTCTCCCTTACTCCCCCGACGACATACACTTC AAAGCCTATTGTAGCTTCTCAAGCCCAACTGCTTACACAGAAACCTCTAC TACGTCTGTCAGCCGCGCACGTTTCTCTAAGGCAAAAGCTGTTGCGACCA CCCGCGTGGGCCTGGGCCTTGGTATTTCGAGACCCCTAGGCCGGAACCTG TTCGCCTCTTGGCCTGCACCATCTACTGCTGTACGCATAGAAAGTCAAAT GGCAATCTCTTCATGCTCGTGTATGGTCTTGGAGGTAACTTTGTGTTTCT GCGCTTCGCAGGTACGATGCGCTAGCGTGTCTACGTCTTATCGGAGACGC GTTGCCTTGGTGCAGCTTGCAGATTGGATTTTTCTCTCAGTTTGCCACAA TCGGCGGGCAGTATCTATGGTCGAGGTACGATGCACGCTGTATTACAGCC TTGCACGTTTTCTGCTCGACCGCTCCTTAGTGTTGACCTCTGTCCTCTGG CCATGTGCGGGATGTGCTGTACAGGGATGGCGAGCATCGATGGAAGACGC TCATATCGCTCTGCTCAAGGTTCCGCATGGCCAACCCCCGACTTCGGCTG CAATAGGCGCTGCACGAATAGGCCTTTTTAGCAGCCAAAGTCACAAGCCC CCGCTCAGGAGCAGCGGCAGCCGAGGCAGTATCATCACAGCTGTAGGCGA TTCAAACGGCCCCTCGGCATCAGGTGCCCAGGCAGCAAGACGCCGGGCGG AGACGTTTTCGGCGGGAGACACCGGGGGGCTCTCTCAGCAGGGCCGCCCG AAAGATGAGACAGGCTCACAGCAGACCGCAGCAATTAGTGGCGACGGTCC AAGGCGAGCGTCTACTGGGGCAGTGAAGGGGAGGAGCGGCTTCCCGGCCG CGTCAGACGGTAGTGGCGGCGGGGGCGATGGAAGCGGCAGCGTCGGCGCG GGGTGGAAAGCGGTGGACTTGTTGGAAGATGCGGCTCTGTTTGGGGTGTT CGACGGACACGGGGGCAAAGCGGTCGCGGACTTTTGCAAGGAGCGGCTAC CGGGTGAGTACATTGTAGGAGCGAAAGGCTCTTTTCGTGAAGGCTTTGAG TTGTCCTTTTATCGGGGTTTTGCACACGGGCAGTACTATGGTGGTGTTCA TTTTTTTGTATATCGGTAGTTCGAGTCAAGTACCTACGACGTGCATCCTT CTATGTGGTGCAGAGTGTCAACCGCGGGTGGTTACGTTGAGTTGCACCAT CGCTTTTTCGTTGCTTGGAACGGGAACGCCGCCCTCGCTGTGGCATGACG CGGCCGCTCGTATAGAGATCCTCGCGCAAAACACGCTTCGAGATGTTGTG GGGCTCGTTGGTGGGTGTTTTCGTGTTTGCCGTGCAGCCTTCTTTATCTA TCTGGCATACGCTTGGTTGGCTAGTCATTGCAAATCGTGCGATAGGTAGT CGTGTCGCGTCGCTGCCGGAAAAAGACAAAGAGAGTGCATGTACAGCAGC AGTTGTGGGTGCTCTGTGGGACGGCTGAATGCTCTTGGCACGGACATATA GAAGAATCACCATGCTCTAGGCTTTGAATAGAGCGGTTATCCGCTGTAGC GGGGGTGAAACGGCCTGCCACATACGCGACCAGGTCGCCCCGGTGGTCTA GTTGGTATCCACGCAACCTTCTATTTCACCAGGTCATAGGATCGAGTCCC TGCGAAGTGATTTTTCTTGTCACTCTCGTTCCTGGAAAAATTGAAAGCGA TAACCTCGTTTGTGAATATATAAATAAACTTCGTCTTGATTGTTGACGAG GGTGGGGAGTGCTGAACCCTACTCGCGGCATAGAACCTAACAGGCAGGAA CCGCAGGAGGAGGTCCAGCCCCCCTCTCCTATGTGACCCCGGTTGGGCCG TCTCGCTAGTAGAAGCGGAGGATGGGGGCCAGAGGGGCGGACGACAGAGT CCAATAATGGGAGAAAAAAAAATGTGTATATGCATGTACCCGTCCTATAG AGAGTCCGCAACTTCGGGTTACAGGACGTTCGGCATTACGAAATGAGTGT TTTAGTGTTCACACGAAGTAGAGGTTTGCCGCGACAGGTGGCGAAGTCTC TGCTGCCAAGCTGCTACCAAGCTGCTGCCAAGCTGCTGCCAATCGCCGAA GACAAAGAGTGGCTCCGTTACAATTTTAGTTCTCAATTATAACTTGCGTT GTGCGAAAACTTGTTTTCTCGCCAGTGTTTGTTAAGTCTCTCCTCGATCG ACGGATCCGCTCTGCAGGCCTGCTGGCCGCGTCGCCTGACATTCGCGCCG GCAACTGGAGGGACGGTTTTCCCCGCGTGTACCACGCCTTGGACGCGCTG CTGACATCCGGAGAAGGGCAGGAAAAAACTGGAGGGTGGGGAGGAGCCAC CAAGGTTGACGGGATAGGTGTGGGTTGCACGATCGTGACAGCCCTGCTGG ACCGGAAAAGAGGACAGGTATATTCGTTGCATTGTTCATGCCGTGTCTTG GCCTGGTCAATCGTGTGCTGCGGGGTGCATGATATGAGTAGTTTGCCTCT TGAGAACTGAGTGGGTGCACCAGAGTATTCGCCTCTATCAGTGCTGGGTG GTACCGTACTCTGCGGTCGTTTGCGCTACGGAGCTCGGTACTTTGTCCAG GAATGATGCACATGGCTTCACCTCGATGCTTCTCTAATCCTCGAGGCTGT CGTCGGTATCGTTAACCCCCTCCCCCTCCCTTGACCCCCCAGTGCTACGT GGCGCACGCGGGTGACTCGCGGTGTGTGCTGTGCCGTGCTGGACGAGCCG TGCAGCTGACAAGAGATCACAAGCCAGGAATGCCGTCCGAGTATGCCAGA ATAGTGGTGAGAACGGTGTGGACACAGCACTCGCGCTGGAGGAATGTAGA GTTAGTCATGTTGATTACTGGCGGCCCCGAGAAGTCGTCATGGCGTGCAT CCTCCAGTTTTTGGTAGCTTTGCCATTCATCACTGCAGAGGTACTACGGT ACTTGACACGAGTTCTACAAGCCGGTCAAGTAGACAAAGCGGAGCAAGAG CTGTCACAAACCATACTACTCTTCTCTTTGGCGGTTAGGGTGAATGACCT CTGTTCTTGTTTTGACTCTCCAGCGCAACAACGCTGCTATGAAGCACTGC CTCACCCTCCTGACTATTTGCCGAGTCTCCGTATCCTCGAACCCTACTTG TATGCGTTCGCGGGTTGCGTCTCCTGTCTTCCGCATATGAGGAAGGTATA TTTGCTCTGTGCGTCGAGTCTGTGATTACCGGCACACGAATACGAGTTGG CTGTGACAAGCATACTCTGGTTAAGTCATGTTGCGGCTCGTGCATACCGT TGGGGGGGTGCAAGTTAACGAAACAGAGAGGTGATCTCCTGGCTGAGAAC AGTTAAAACCTCAAGTGCGTTTCTTCGGCCAACTACTCTCTGCCCGTCGC GAAAAGAAGTTTGCTCACGGAGGTCGAGGTTTGGAGAAAACTTGCAATAT TTCTAAGATTTTTCGGCAGAACGAGTGTTGTTGTTGTTTTTCGATTTGAC CCAACTGCTGCCTGTGAAACAACATGTTCTCGTAGTGGTGTGCCGCCGGA CTTCGGCGTTGGAATGTGAGGATGGCCGAGAGCCCGATATACGTGTATCG CCTTCGCATCGTACCCCCACCCAATGCTGCGAGCTTGATGCCTATCCTGC GATCCTGTGGTTTACTGGTCTGTCACAGGCTGCCGGTGGGCATGTGTCGC GGGCCGGTCGAGTCAACGACAATTTAAACCTCTCTCGAGCCATTGGTGAT ATGGTGTACAAGAGAAACCACCTTCGGCAACCGAAAGACCAAATCATCTC CGCCGAGCCCGACGTTTGCAGGTGAGTCAAGTATGGACAATGTCGAGAAG GGGTGTATGGCTCTTCAGGTAGTCAGAGTACAGATACCACACGGTGATTG GCGAGCAGTACTTGCCGCCATCACGTATATTGGATGCTTTCATGAAACAT ACGTGGTACTGACGTATCCAAAAGCACCAGCAATGCGCTCAACAAATGTA ATGGTGGCTGGTACGATGCTTGTAGGTCCGGTGCCCTGTTTTATGGATGA AACCAACGTCTAAGATTTACCCCAGGGCTACATGTCGTCGATAAGCCAAC CCAGGAGATATTCCTGAGTACCAGCCCGACCTAACCCAAGATTTTTTTTC ACCCGAGTGTACGCCATGCGGTATGACATGCAACATGGCTGCTGCGCGCA GTCGTGGGGCAGCAACCCACCTCATGATCCATGTGCTTTGCACGCGATGC CGCACGTGCAGGTTTCTGGTGACCCCCGGCGTGGACGAATTTTTGATACT GGCCTGCGACGGAGTGTGGGAGATGATGAACACGACACAAGGTATGGGTG CTTGCCTTCTGTTTTCCCGCAGTTAAACGAATTTTACGCTTGGGAAAGAA ACTGGTCGTCTGGCATTTTCTTCGGCTAGTGTGTCCGATGGTGTGGTGCG ATCGCTTTCATTCGGTGCCAGCATCACGTGTTCGCACTTGTCGAAACATT TCGTAAACATCACCTCCGATCGTTCAACTAGGATGCCTGGCACAATGACG GGATTGGCTTTGACATGCCTGAGCATACTATTGGGGCGAGTAAGCGGAAC ACCAACTCTTGGAAGCCAACAGTCCCAACAAAGAAACCGCAATTTGTTTT GGACCTACGACCTACGCTACCTACTGGTAGACTTTTCCTGTCTGGATAAT ACGTGATCCCGTGTACGCACTCTCCCGACATGCCATGCCCCGCGCGCCGT CGTCCGGTCGTTGCCGTTTTGGTATCATAGTTGTGGCGTTCGTTCGGTCA GGCCTTCGCTCTGGTTCTGCCCCGCGAGAGGTCTGCGAGAGCCTCCTCGA TGCTTGCCTCTCACCCGACCCAAAGGGCACGCGCTATGCTGGCTGCGACA ACATGACGGTACTACTGGTTTTGCTGGATGGATGGGAGGGGGCGCTAGCC ACCAAGGCCTACACGCCAGCCTTGACTTTTTCCGGGGGCAGAATCGGGAG CGTGGGAGAGGCTGCTGCAGCAATGTCTGCGACCCTGCCGAAAATGCCTC GGCCATTGAACAACGCTCGGCCTCCTCTTCCAGCGGAGTTTCGAGCGGCA ATGTCTGCCGGGACGACCGCACCAGCCCCTAAATCCGAGAGTGACCCGCA AGCCGCCCAAGAAGCTGGCGCGGCGAACAGAGAGAAACTTGCAGCACCCG CACGAGAAACAGGGCCGTCTGGCGATGGGAATGCAAGCCAAGGAAACGCG ACCGTAGGCGCAACGGACAGTGGGGCAACAATGGGCTGGACTCAGCGAAG AATAGCGGCAGGCAAAGTGGCGCCTCCCCGCACGGCCCACGGAATAGAGT TCGCACTCGCGTCGTTCTCGGCCCCCTTTGTAGCCAAAGCTCCGGCAGCT GGTTCGCGCATGAGCACGGGCAGCATCAATAGCCGCGGCGTTGTTACCGC CGCTACCGGTGCCTCGGCTACCGCTGGTGACTTGGCCACGTCGGCGGTGG CCAAACAGCGGAATGCGTCACGAGCGAGCAGCAGCTCCGTTCCCCCAAAC GCTCGACGGCGAAACAACAACCATCTGCGATCGGCCACCGCGCCGATGCT GCCGTCCCCTTTGTGGCACCACCGCCAGCGCCGCGAACCTCCGTCGGAAG AGCGGATTGCCGCTGCGGCGGCGGTAGCCGTCCTGGCCGAAGTCGGCGCG GCCGGCGCCGTTGCTGCTTCTGCCTTGGCAGAAGAAAACGCGGCGCCGCC ATGTCCAAATTCCAGTGCCAATGGAAGGACAGGTGGTATGGCGGAGGTCG GCCCTACCGGAGAGGTGTGCTGTCGAGGCAAGGCCGGGGAGGAGCCAGGC CGGCAAGCACCGCCATCGGAGGATGCCGGCTTAGTGTTCGTGCCTGTCGA GCCGTCAGTGACACCTTCAGAGGTAACCATCACTGCGACTGCGTCTCCTC ATCACCCCACCTAG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig122:19604..27317-

>mRNA_E-fasciculatus_F_contig122.1709.1 ID=mRNA_E-fasciculatus_F_contig122.1709.1|Name=mRNA_E-fasciculatus_F_contig122.1709.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4680bp|location=Sequence derived from alignment at E-fasciculatus_F_contig122:19604..27317- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGTGGATATTCTAGCACGCCCCGAAAAGGGAAAACCTCGGAGGAAGA
AGGAGACGAAAGCTTATTCTACGCTGCAAGTGGGATGCAAATGGGTGGAT
ATTCTAGCACGCCCCGAAAAGGGAAAACCTCGGAGGAAGAAGGAGACGAA
AGCTTATTCTACGCTGCAAGTGGGATGCAAGGATGGCGAGCATCGATGGA
AGACGCTCATATCGCTCTGCTCAAGGTTCCGCATGGCCAACCCCCGACTT
CGGCTGCAATAGGCGCTGCACGAATAGGCCTTTTTAGCAGCCAAAGTCAC
AAGCCCCCGCTCAGGAGCAGCGGCAGCCGAGGCAGTATCATCACAGCTGT
AGGCGATTCAAACGGCCCCTCGGCATCAGGTGCCCAGGCAGCAAGACGCC
GGGCGGAGACGTTTTCGGCGGGAGACACCGGGGGGCTCTCTCAGCAGGGC
CGCCCGAAAGATGAGACAGGCTCACAGCAGACCGCAGCAATTAGTGGCGA
CGGTCCAAGGCGAGCGTCTACTGGGGCAGTGAAGGGGAGGAGCGGCTTCC
CGGCCGCGTCAGACGGTAGTGGCGGCGGGGGCGATGGAAGCGGCAGCGTC
GGCGCGGGGTGGAAAGCGGTGGACTTGTTGGAAGATGCGGCTCTGTTTGG
GGTGTTCGACGGACACGGGGGCAAAGCGGTCGCGGACTTTTGCAAGGAGC
GGCTACCGGGGATGGCGAGCATCGATGGAAGACGCTCATATCGCTCTGCT
CAAGGTTCCGCATGGCCAACCCCCGACTTCGGCTGCAATAGGCGCTGCAC
GAATAGGCCTTTTTAGCAGCCAAAGTCACAAGCCCCCGCTCAGGAGCAGC
GGCAGCCGAGGCAGTATCATCACAGCTGTAGGCGATTCAAACGGCCCCTC
GGCATCAGGTGCCCAGGCAGCAAGACGCCGGGCGGAGACGTTTTCGGCGG
GAGACACCGGGGGGCTCTCTCAGCAGGGCCGCCCGAAAGATGAGACAGGC
TCACAGCAGACCGCAGCAATTAGTGGCGACGGTCCAAGGCGAGCGTCTAC
TGGGGCAGTGAAGGGGAGGAGCGGCTTCCCGGCCGCGTCAGACGGTAGTG
GCGGCGGGGGCGATGGAAGCGGCAGCGTCGGCGCGGGGTGGAAAGCGGTG
GACTTGTTGGAAGATGCGGCTCTGTTTGGGGTGTTCGACGGACACGGGGG
CAAAGCGGTCGCGGACTTTTGCAAGGAGCGGCTACCGGGCCTGCTGGCCG
CGTCGCCTGACATTCGCGCCGGCAACTGGAGGGACGGTTTTCCCCGCGTG
TACCACGCCTTGGACGCGCTGCTGACATCCGGAGAAGGGCAGGAAAAAAC
TGGAGGGTGGGGAGGAGCCACCAAGGTTGACGGGATAGGTGTGGGTTGCA
CGATCGTGACAGCCCTGCTGGACCGGAAAAGAGGACAGGCCTGCTGGCCG
CGTCGCCTGACATTCGCGCCGGCAACTGGAGGGACGGTTTTCCCCGCGTG
TACCACGCCTTGGACGCGCTGCTGACATCCGGAGAAGGGCAGGAAAAAAC
TGGAGGGTGGGGAGGAGCCACCAAGGTTGACGGGATAGGTGTGGGTTGCA
CGATCGTGACAGCCCTGCTGGACCGGAAAAGAGGACAGTGCTACGTGGCG
CACGCGGGTGACTCGCGGTGTGTGCTGTGCCGTGCTGGACGAGCCGTGCA
GCTGACAAGAGATCACAAGCCAGGAATGCCGTCCGAGTATGCCAGAATAG
TGTGCTACGTGGCGCACGCGGGTGACTCGCGGTGTGTGCTGTGCCGTGCT
GGACGAGCCGTGCAGCTGACAAGAGATCACAAGCCAGGAATGCCGTCCGA
GTATGCCAGAATAGTGGCTGCCGGTGGGCATGTGTCGCGGGCCGGTCGAG
TCAACGACAATTTAAACCTCTCTCGAGCCATTGGTGATATGGTGTACAAG
AGAAACCACCTTCGGCAACCGAAAGACCAAATCATCTCCGCCGAGCCCGA
CGTTTGCAGGCTGCCGGTGGGCATGTGTCGCGGGCCGGTCGAGTCAACGA
CAATTTAAACCTCTCTCGAGCCATTGGTGATATGGTGTACAAGAGAAACC
ACCTTCGGCAACCGAAAGACCAAATCATCTCCGCCGAGCCCGACGTTTGC
AGGTTTCTGGTGACCCCCGGCGTGGACGAATTTTTGATACTGGCCTGCGA
CGGAGTGTGGGAGATGATGAACACGACACAAGGTTTCTGGTGACCCCCGG
CGTGGACGAATTTTTGATACTGGCCTGCGACGGAGTGTGGGAGATGATGA
ACACGACACAAGTTGTGGCGTTCGTTCGGTCAGGCCTTCGCTCTGGTTCT
GCCCCGCGAGAGGTCTGCGAGAGCCTCCTCGATGCTTGCCTCTCACCCGA
CCCAAAGGGCACGCGCTATGCTGGCTGCGACAACATGACGGTACTACTGG
TTTTGCTGGATGGATGGGAGGGGGCGCTAGCCACCAAGGCCTACACGCCA
GCCTTGACTTTTTCCGGGGGCAGAATCGGGAGCGTGGGAGAGGCTGCTGC
AGCAATGTCTGCGACCCTGCCGAAAATGCCTCGGCCATTGAACAACGCTC
GGCCTCCTCTTCCAGCGGAGTTTCGAGCGGCAATGTCTGCCGGGACGACC
GCACCAGCCCCTAAATCCGAGAGTGACCCGCAAGCCGCCCAAGAAGCTGG
CGCGGCGAACAGAGAGAAACTTGCAGCACCCGCACGAGAAACAGGGCCGT
CTGGCGATGGGAATGCAAGCCAAGGAAACGCGACCGTAGGCGCAACGGAC
AGTGGGGCAACAATGGGCTGGACTCAGCGAAGAATAGCGGCAGGCAAAGT
GGCGCCTCCCCGCACGGCCCACGGAATAGAGTTCGCACTCGCGTCGTTCT
CGGCCCCCTTTGTAGCCAAAGCTCCGGCAGCTGGTTCGCGCATGAGCACG
GGCAGCATCAATAGCCGCGGCGTTGTTACCGCCGCTACCGGTGCCTCGGC
TACCGCTGGTGACTTGGCCACGTCGGCGGTGGCCAAACAGCGGAATGCGT
CACGAGCGAGCAGCAGCTCCGTTCCCCCAAACGCTCGACGGCGAAACAAC
AACCATCTGCGATCGGCCACCGCGCCGATGCTGCCGTCCCCTTTGTGGCA
CCACCGCCAGCGCCGCGAACCTCCGTCGGAAGAGCGGATTGCCGCTGCGG
CGGCGGTAGCCGTCCTGGCCGAAGTCGGCGCGGCCGGCGCCGTTGCTGCT
TCTGCCTTGGCAGAAGAAAACGCGGCGCCGCCATGTCCAAATTCCAGTGC
CAATGGAAGGACAGGTGGTATGGCGGAGGTCGGCCCTACCGGAGAGGTGT
GCTGTCGAGGCAAGGCCGGGGAGGAGCCAGGCCGGCAAGCACCGCCATCG
GAGGATGCCGGCTTAGTGTTCGTGCCTGTCGAGCCGTCAGTGACACCTTC
AGAGGTAACCATCACTGCGACTGCGTCTCCTCATCACCCCACCTAGTTGT
GGCGTTCGTTCGGTCAGGCCTTCGCTCTGGTTCTGCCCCGCGAGAGGTCT
GCGAGAGCCTCCTCGATGCTTGCCTCTCACCCGACCCAAAGGGCACGCGC
TATGCTGGCTGCGACAACATGACGGTACTACTGGTTTTGCTGGATGGATG
GGAGGGGGCGCTAGCCACCAAGGCCTACACGCCAGCCTTGACTTTTTCCG
GGGGCAGAATCGGGAGCGTGGGAGAGGCTGCTGCAGCAATGTCTGCGACC
CTGCCGAAAATGCCTCGGCCATTGAACAACGCTCGGCCTCCTCTTCCAGC
GGAGTTTCGAGCGGCAATGTCTGCCGGGACGACCGCACCAGCCCCTAAAT
CCGAGAGTGACCCGCAAGCCGCCCAAGAAGCTGGCGCGGCGAACAGAGAG
AAACTTGCAGCACCCGCACGAGAAACAGGGCCGTCTGGCGATGGGAATGC
AAGCCAAGGAAACGCGACCGTAGGCGCAACGGACAGTGGGGCAACAATGG
GCTGGACTCAGCGAAGAATAGCGGCAGGCAAAGTGGCGCCTCCCCGCACG
GCCCACGGAATAGAGTTCGCACTCGCGTCGTTCTCGGCCCCCTTTGTAGC
CAAAGCTCCGGCAGCTGGTTCGCGCATGAGCACGGGCAGCATCAATAGCC
GCGGCGTTGTTACCGCCGCTACCGGTGCCTCGGCTACCGCTGGTGACTTG
GCCACGTCGGCGGTGGCCAAACAGCGGAATGCGTCACGAGCGAGCAGCAG
CTCCGTTCCCCCAAACGCTCGACGGCGAAACAACAACCATCTGCGATCGG
CCACCGCGCCGATGCTGCCGTCCCCTTTGTGGCACCACCGCCAGCGCCGC
GAACCTCCGTCGGAAGAGCGGATTGCCGCTGCGGCGGCGGTAGCCGTCCT
GGCCGAAGTCGGCGCGGCCGGCGCCGTTGCTGCTTCTGCCTTGGCAGAAG
AAAACGCGGCGCCGCCATGTCCAAATTCCAGTGCCAATGGAAGGACAGGT
GGTATGGCGGAGGTCGGCCCTACCGGAGAGGTGTGCTGTCGAGGCAAGGC
CGGGGAGGAGCCAGGCCGGCAAGCACCGCCATCGGAGGATGCCGGCTTAG
TGTTCGTGCCTGTCGAGCCGTCAGTGACACCTTCAGAGGTAACCATCACT
GCGACTGCGTCTCCTCATCACCCCACCTAG
back to top